Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:11:58 (31243): wrapper (7.7.26015): starting
07:11:58 (31243): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 07:11:58] Arguments: --nthreads 8
[2026-01-09 07:11:58] Threads: 8
[2026-01-09 07:11:58] Checking for CVMFS
[2026-01-09 07:11:58] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 07:11:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 07:11:58] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 07:11:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 07:11:58] 2.11.2.0 2847 136643 83008 154942 2 59 13748505 20275200 1 130560 0 36618611 99.823 9068346 26490 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 07:11:58] CVMFS is ok
[2026-01-09 07:11:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 07:11:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 07:11:58] Further information can be found at the LHC@home message board.
[2026-01-09 07:11:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 07:11:58] Checking for apptainer binary...
[2026-01-09 07:11:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 07:11:58] Running /usr/bin/apptainer --version
[2026-01-09 07:11:58] apptainer version 1.3.2-1.el7
[2026-01-09 07:11:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 07:12:00] c-204-19.aglt2.org
[2026-01-09 07:12:00] apptainer works
[2026-01-09 07:12:00] Set ATHENA_PROC_NUMBER=8
[2026-01-09 07:12:00] Set ATHENA_CORE_NUMBER=8
[2026-01-09 07:12:00] Starting ATLAS job with PandaID=6963192011
[2026-01-09 07:12:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 10:09:41]  *** The last 200 lines of the pilot log: ***
[2026-01-09 10:09:41] 2026-01-09 15:08:32,819 | INFO     | time since job start (10574s) is within the limit (349056.0s)
[2026-01-09 10:09:41] 2026-01-09 15:08:33,124 | WARNING  | process 9150 can no longer be monitored (due to stat problems) - aborting
[2026-01-09 10:09:41] 2026-01-09 15:08:33,124 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963192011/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 10:09:41] 2026-01-09 15:08:33,214 | INFO     | number of running child processes to parent process 9150: 1
[2026-01-09 10:09:41] 2026-01-09 15:08:33,215 | INFO     | maximum number of monitored processes: 6
[2026-01-09 10:09:41] 2026-01-09 15:08:34,827 | INFO     | time since job start (10576s) is within the limit (349056.0s)
[2026-01-09 10:09:41] 2026-01-09 15:08:35,719 | INFO     | monitor loop #775: job 0:6963192011 is in state 'finished'
[2026-01-09 10:09:41] 2026-01-09 15:08:35,719 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 10:09:41] 2026-01-09 15:08:36,217 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 10:09:41] 2026-01-09 15:08:36,222 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2026-01-09 10:09:41] 2026-01-09 15:08:36,224 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963192011/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 10:09:41] 2026-01-09 15:08:36,225 | INFO     | extracted standard info from prmon json
[2026-01-09 10:09:41] 2026-01-09 15:08:36,225 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 10:09:41] 2026-01-09 15:08:36,226 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 10:09:41] 2026-01-09 15:08:36,226 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 10:09:41] 2026-01-09 15:08:36,226 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 10:09:41] 2026-01-09 15:08:36,230 | INFO     | fitting pss+swap vs Time
[2026-01-09 10:09:41] 2026-01-09 15:08:36,230 | INFO     | sum of square deviations: 1605470102.0
[2026-01-09 10:09:41] 2026-01-09 15:08:36,231 | INFO     | sum of deviations: 4851443216.000001
[2026-01-09 10:09:41] 2026-01-09 15:08:36,231 | INFO     | mean x: 1767966016.0
[2026-01-09 10:09:41] 2026-01-09 15:08:36,232 | INFO     | mean y: 2509630.3005780345
[2026-01-09 10:09:41] 2026-01-09 15:08:36,232 | INFO     | intersect: -5339967145.664789
[2026-01-09 10:09:41] 2026-01-09 15:08:36,232 | INFO     | chi2: 1.6158611766283675
[2026-01-09 10:09:41] 2026-01-09 15:08:36,232 | INFO     | sum of square deviations: 1470248962.0
[2026-01-09 10:09:41] 2026-01-09 15:08:36,233 | INFO     | sum of deviations: 4764677456.499997
[2026-01-09 10:09:41] 2026-01-09 15:08:36,233 | INFO     | mean x: 1767965863.5
[2026-01-09 10:09:41] 2026-01-09 15:08:36,234 | INFO     | mean y: 2509531.863095238
[2026-01-09 10:09:41] 2026-01-09 15:08:36,234 | INFO     | intersect: -5726987520.269495
[2026-01-09 10:09:41] 2026-01-09 15:08:36,234 | INFO     | chi2: 1.61662887301322
[2026-01-09 10:09:41] 2026-01-09 15:08:36,234 | INFO     | current chi2=1.61662887301322 (change=-0.04751004578588095 %)
[2026-01-09 10:09:41] 2026-01-09 15:08:36,234 | INFO     | right removable region: 167
[2026-01-09 10:09:41] 2026-01-09 15:08:36,234 | INFO     | sum of square deviations: 1470248962.0
[2026-01-09 10:09:41] 2026-01-09 15:08:36,235 | INFO     | sum of deviations: -20893127781.5
[2026-01-09 10:09:41] 2026-01-09 15:08:36,235 | INFO     | mean x: 1767966168.5
[2026-01-09 10:09:41] 2026-01-09 15:08:36,236 | INFO     | mean y: 2538265.875
[2026-01-09 10:09:41] 2026-01-09 15:08:36,236 | INFO     | intersect: 25126407778.14571
[2026-01-09 10:09:41] 2026-01-09 15:08:36,236 | INFO     | chi2: 0.15870831864164694
[2026-01-09 10:09:41] 2026-01-09 15:08:36,236 | INFO     | current chi2=0.15870831864164694 (change=90.17809692211274 %)
[2026-01-09 10:09:41] 2026-01-09 15:08:36,236 | INFO     | sum of square deviations: 1342841922.0
[2026-01-09 10:09:41] 2026-01-09 15:08:36,237 | INFO     | sum of deviations: -20200719191.000004
[2026-01-09 10:09:41] 2026-01-09 15:08:36,237 | INFO     | mean x: 1767966321.0
[2026-01-09 10:09:41] 2026-01-09 15:08:36,238 | INFO     | mean y: 2537371.1042944784
[2026-01-09 10:09:41] 2026-01-09 15:08:36,238 | INFO     | intersect: 26598513118.178394
[2026-01-09 10:09:41] 2026-01-09 15:08:36,238 | INFO     | chi2: 0.14375962613265883
[2026-01-09 10:09:41] 2026-01-09 15:08:36,238 | INFO     | current chi2=0.14375962613265883 (change=9.418972261146115 %)
[2026-01-09 10:09:41] 2026-01-09 15:08:36,238 | INFO     | left removable region: 20
[2026-01-09 10:09:41] 2026-01-09 15:08:36,238 | INFO     | sum of square deviations: 984941258.0
[2026-01-09 10:09:41] 2026-01-09 15:08:36,239 | INFO     | sum of deviations: -8482427529.0
[2026-01-09 10:09:41] 2026-01-09 15:08:36,239 | INFO     | mean x: 1767966443.0
[2026-01-09 10:09:41] 2026-01-09 15:08:36,240 | INFO     | mean y: 2522625.836734694
[2026-01-09 10:09:41] 2026-01-09 15:08:36,240 | INFO     | intersect: 15228453212.705713
[2026-01-09 10:09:41] 2026-01-09 15:08:36,240 | INFO     | chi2: 0.09482792370416361
[2026-01-09 10:09:41] 2026-01-09 15:08:36,240 | INFO     | current memory leak: -8.61 B/s (using 147 data points, chi2=0.09)
[2026-01-09 10:09:41] 2026-01-09 15:08:36,241 | INFO     | could have reported an average CPU frequency of 2027 MHz (9 samples)
[2026-01-09 10:09:41] 2026-01-09 15:08:36,241 | INFO     | ..............................
[2026-01-09 10:09:41] 2026-01-09 15:08:36,241 | INFO     | . Timing measurements:
[2026-01-09 10:09:41] 2026-01-09 15:08:36,241 | INFO     | . get job = 0 s
[2026-01-09 10:09:41] 2026-01-09 15:08:36,241 | INFO     | . initial setup = 2 s
[2026-01-09 10:09:41] 2026-01-09 15:08:36,241 | INFO     | . payload setup = 8 s
[2026-01-09 10:09:41] 2026-01-09 15:08:36,241 | INFO     | . stage-in = 0 s
[2026-01-09 10:09:41] 2026-01-09 15:08:36,242 | INFO     | . payload execution = 10540 s
[2026-01-09 10:09:41] 2026-01-09 15:08:36,242 | INFO     | . stage-out = 0 s
[2026-01-09 10:09:41] 2026-01-09 15:08:36,242 | INFO     | . log creation = 0 s
[2026-01-09 10:09:41] 2026-01-09 15:08:36,242 | INFO     | ..............................
[2026-01-09 10:09:41] 2026-01-09 15:08:36,338 | INFO     | 
[2026-01-09 10:09:41] 2026-01-09 15:08:36,338 | INFO     | job summary report
[2026-01-09 10:09:41] 2026-01-09 15:08:36,338 | INFO     | --------------------------------------------------
[2026-01-09 10:09:41] 2026-01-09 15:08:36,339 | INFO     | PanDA job id: 6963192011
[2026-01-09 10:09:41] 2026-01-09 15:08:36,339 | INFO     | task id: 47898826
[2026-01-09 10:09:41] 2026-01-09 15:08:36,339 | INFO     | errors: (none)
[2026-01-09 10:09:41] 2026-01-09 15:08:36,339 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 10:09:41] 2026-01-09 15:08:36,339 | INFO     | pilot state: finished 
[2026-01-09 10:09:41] 2026-01-09 15:08:36,340 | INFO     | transexitcode: 0
[2026-01-09 10:09:41] 2026-01-09 15:08:36,340 | INFO     | exeerrorcode: 0
[2026-01-09 10:09:41] 2026-01-09 15:08:36,340 | INFO     | exeerrordiag: 
[2026-01-09 10:09:41] 2026-01-09 15:08:36,340 | INFO     | exitcode: 0
[2026-01-09 10:09:41] 2026-01-09 15:08:36,340 | INFO     | exitmsg: OK
[2026-01-09 10:09:41] 2026-01-09 15:08:36,341 | INFO     | cpuconsumptiontime: 79756 s
[2026-01-09 10:09:41] 2026-01-09 15:08:36,341 | INFO     | nevents: 400
[2026-01-09 10:09:41] 2026-01-09 15:08:36,341 | INFO     | neventsw: 0
[2026-01-09 10:09:41] 2026-01-09 15:08:36,341 | INFO     | pid: 9150
[2026-01-09 10:09:41] 2026-01-09 15:08:36,341 | INFO     | pgrp: 9150
[2026-01-09 10:09:41] 2026-01-09 15:08:36,341 | INFO     | corecount: 8
[2026-01-09 10:09:41] 2026-01-09 15:08:36,342 | INFO     | event service: False
[2026-01-09 10:09:41] 2026-01-09 15:08:36,342 | INFO     | sizes: {0: 2283971, 6: 2284233, 11: 2284261, 10552: 2313177, 10553: 2322175, 10554: 2322231, 10560: 2322617}
[2026-01-09 10:09:41] 2026-01-09 15:08:36,342 | INFO     | --------------------------------------------------
[2026-01-09 10:09:41] 2026-01-09 15:08:36,342 | INFO     | 
[2026-01-09 10:09:41] 2026-01-09 15:08:36,342 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 10:09:41] 2026-01-09 15:08:36,372 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 10:09:41] 2026-01-09 15:08:36,372 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 10:09:41] 2026-01-09 15:08:36,372 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 10:09:41] 2026-01-09 15:08:36,373 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 10:09:41] 2026-01-09 15:08:36,373 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 10:09:41] 2026-01-09 15:08:36,373 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 10:09:41] 2026-01-09 15:08:36,373 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 10:09:41] 2026-01-09 15:08:36,373 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 10:09:41] 2026-01-09 15:08:36,373 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 10:09:41] 2026-01-09 15:08:36,374 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 10:09:41] 2026-01-09 15:08:36,374 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 10:09:41] 2026-01-09 15:08:36,374 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 10:09:41] 2026-01-09 15:08:36,374 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 10:09:41] 2026-01-09 15:08:36,374 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 10:09:41] 2026-01-09 15:08:36,375 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 10:09:41] 2026-01-09 15:08:36,375 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 10:09:41] 2026-01-09 15:08:36,375 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 10:09:41] 2026-01-09 15:08:36,375 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 10:09:41] 2026-01-09 15:08:36,375 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 10:09:41] 2026-01-09 15:08:36,376 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 10:09:41] 2026-01-09 15:08:36,376 | INFO     | job 6963192011 has completed (purged errors)
[2026-01-09 10:09:41] 2026-01-09 15:08:36,376 | INFO     | overall cleanup function is called
[2026-01-09 10:09:41] 2026-01-09 15:08:37,384 | INFO     | --- collectZombieJob: --- 10, [9150]
[2026-01-09 10:09:41] 2026-01-09 15:08:37,384 | INFO     | zombie collector waiting for pid 9150
[2026-01-09 10:09:41] 2026-01-09 15:08:37,385 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 10:09:41] 2026-01-09 15:08:37,385 | INFO     | collected zombie processes
[2026-01-09 10:09:41] 2026-01-09 15:08:37,385 | INFO     | will attempt to kill all subprocesses of pid=9150
[2026-01-09 10:09:41] 2026-01-09 15:08:37,482 | INFO     | process IDs to be killed: [9150] (in reverse order)
[2026-01-09 10:09:41] 2026-01-09 15:08:37,538 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 10:09:41] 2026-01-09 15:08:37,539 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 10:09:41] 2026-01-09 15:08:37,544 | INFO     | did not find any defunct processes belonging to 9150
[2026-01-09 10:09:41] 2026-01-09 15:08:37,547 | INFO     | did not find any defunct processes belonging to 9150
[2026-01-09 10:09:41] 2026-01-09 15:08:37,547 | INFO     | ready for new job
[2026-01-09 10:09:41] 2026-01-09 15:08:37,548 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 10:09:41] 2026-01-09 15:08:37,550 | INFO     | ***************************************
[2026-01-09 10:09:41] 2026-01-09 15:08:37,550 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 10:09:41] 2026-01-09 15:08:37,550 | INFO     | ***************************************
[2026-01-09 10:09:41] 2026-01-09 15:08:37,551 | INFO     | 
[2026-01-09 10:09:41] 2026-01-09 15:08:37,551 | INFO     | architecture information:
[2026-01-09 10:09:41] 2026-01-09 15:08:37,552 | INFO     | executing command: cat /etc/os-release
[2026-01-09 10:09:41] 2026-01-09 15:08:37,570 | INFO     | cat /etc/os-release:
[2026-01-09 10:09:41] NAME="CentOS Linux"
[2026-01-09 10:09:41] VERSION="7 (Core)"
[2026-01-09 10:09:41] ID="centos"
[2026-01-09 10:09:41] ID_LIKE="rhel fedora"
[2026-01-09 10:09:41] VERSION_ID="7"
[2026-01-09 10:09:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 10:09:41] ANSI_COLOR="0;31"
[2026-01-09 10:09:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 10:09:41] HOME_URL="https://www.centos.org/"
[2026-01-09 10:09:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 10:09:41] 
[2026-01-09 10:09:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 10:09:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 10:09:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 10:09:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 10:09:41] 
[2026-01-09 10:09:41] 2026-01-09 15:08:37,570 | INFO     | ***************************************
[2026-01-09 10:09:41] 2026-01-09 15:08:38,074 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 10:09:41] 2026-01-09 15:08:38,094 | INFO     | sufficient remaining disk space (18505269248 B)
[2026-01-09 10:09:41] 2026-01-09 15:08:38,094 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 10:09:41] 2026-01-09 15:08:38,095 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 10:09:41] 2026-01-09 15:08:38,095 | INFO     | update_server=False
[2026-01-09 10:09:41] 2026-01-09 15:08:38,095 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 10:09:41] 2026-01-09 15:08:38,095 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 10:09:41] 2026-01-09 15:08:38,162 | INFO     | all data control threads have been joined
[2026-01-09 10:09:41] 2026-01-09 15:08:38,223 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 10:09:41] 2026-01-09 15:08:38,223 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 10:09:41] 2026-01-09 15:08:38,223 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 10:09:41] 2026-01-09 15:08:38,224 | INFO     | will abort loop
[2026-01-09 10:09:41] 2026-01-09 15:08:38,870 | INFO     | all payload control threads have been joined
[2026-01-09 10:09:41] 2026-01-09 15:08:38,953 | INFO     | all job control threads have been joined
[2026-01-09 10:09:41] 2026-01-09 15:08:39,101 | INFO     | [job] retrieve thread has finished
[2026-01-09 10:09:41] 2026-01-09 15:08:39,101 | INFO     | [job] queue monitor thread has finished
[2026-01-09 10:09:41] 2026-01-09 15:08:39,167 | INFO     | [data] control thread has finished
[2026-01-09 10:09:41] 2026-01-09 15:08:39,229 | INFO     | [job] job monitor thread has finished
[2026-01-09 10:09:41] 2026-01-09 15:08:39,424 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 10:09:41] 2026-01-09 15:08:39,547 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 10:09:41] 2026-01-09 15:08:39,876 | INFO     | [job] validate thread has finished
[2026-01-09 10:09:41] 2026-01-09 15:08:39,876 | INFO     | [payload] control thread has finished
[2026-01-09 10:09:41] 2026-01-09 15:08:39,883 | INFO     | [data] copytool_in thread has finished
[2026-01-09 10:09:41] 2026-01-09 15:08:39,958 | INFO     | [job] control thread has finished
[2026-01-09 10:09:41] 2026-01-09 15:08:39,960 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 10:09:41] 2026-01-09 15:08:40,216 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 10:09:41] 2026-01-09 15:08:40,223 | INFO     | [payload] validate_post thread has finished
[2026-01-09 10:09:41] 2026-01-09 15:08:40,311 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 10:09:41] 2026-01-09 15:08:40,565 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 10:09:41] 2026-01-09 15:08:40,651 | INFO     | [payload] failed_post thread has finished
[2026-01-09 10:09:41] 2026-01-09 15:08:41,553 | INFO     | [data] copytool_out thread has finished
[2026-01-09 10:09:41] 2026-01-09 15:08:43,966 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 10:09:41] 2026-01-09 15:09:08,049 | INFO     | PID=2679 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-09 10:09:41] 2026-01-09 15:09:08,050 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 10:09:41] 2026-01-09 15:09:08,050 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 10:09:41] 2026-01-09 15:09:08,050 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 10:09:41] 2026-01-09 15:09:35,458 | INFO     | [monitor] cgroup control has ended
[2026-01-09 10:09:41] 2026-01-09 15:09:36,390 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140626310158144)>', '<ExcThread(monitor, started 140625701738240)>']
[2026-01-09 10:09:41] 2026-01-09 15:09:37,199 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 10:09:41] 2026-01-09 15:09:37,199 | INFO     | [monitor] control thread has ended
[2026-01-09 10:09:41] 2026-01-09 15:09:41,414 | INFO     | all workflow threads have been joined
[2026-01-09 10:09:41] 2026-01-09 15:09:41,414 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 10:09:41] 2026-01-09 15:09:41,415 | INFO     | traces error code: 0
[2026-01-09 10:09:41] 2026-01-09 15:09:41,415 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 10:09:41] 2026-01-09 15:09:41,542 [wrapper] ==== pilot stdout END ====
[2026-01-09 10:09:41] 2026-01-09 15:09:41,547 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 10:09:41] 2026-01-09 15:09:41,552 [wrapper] pilotpid: 2679
[2026-01-09 10:09:41] 2026-01-09 15:09:41,557 [wrapper] Pilot exit status: 0
[2026-01-09 10:09:41] 2026-01-09 15:09:41,579 [wrapper] pandaids: 6963192011
[2026-01-09 10:09:41] 2026-01-09 15:09:41,634 [wrapper] cleanup supervisor_pilot 27605 2680
[2026-01-09 10:09:41] 2026-01-09 15:09:41,638 [wrapper] Test setup, not cleaning
[2026-01-09 10:09:41] 2026-01-09 15:09:41,643 [wrapper] apfmon messages muted
[2026-01-09 10:09:41] 2026-01-09 15:09:41,647 [wrapper] ==== wrapper stdout END ====
[2026-01-09 10:09:41] 2026-01-09 15:09:41,652 [wrapper] ==== wrapper stderr END ====
[2026-01-09 10:09:41]  *** Error codes and diagnostics ***
[2026-01-09 10:09:41]     "exeErrorCode": 0,
[2026-01-09 10:09:41]     "exeErrorDiag": "",
[2026-01-09 10:09:41]     "pilotErrorCode": 0,
[2026-01-09 10:09:41]     "pilotErrorDiag": "",
[2026-01-09 10:09:41]  *** Listing of results directory ***
[2026-01-09 10:09:41] total 440108
[2026-01-09 10:09:41] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-09 10:09:41] -rwx------ 1 boincer umatlas     36322 Jan  8 23:25 runpilot2-wrapper.sh
[2026-01-09 10:09:41] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 23:30 queuedata.json
[2026-01-09 10:09:41] -rw-r--r-- 1 boincer umatlas       100 Jan  9 07:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 10:09:41] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 07:11 run_atlas
[2026-01-09 10:09:41] -rw-r--r-- 1 boincer umatlas       105 Jan  9 07:11 job.xml
[2026-01-09 10:09:41] -rw-r--r-- 2 boincer umatlas 222526274 Jan  9 07:11 EVNT.47898824._001494.pool.root.1
[2026-01-09 10:09:41] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 07:11 start_atlas.sh
[2026-01-09 10:09:41] drwxrwx--x 2 boincer umatlas      4096 Jan  9 07:11 shared
[2026-01-09 10:09:41] -rw-r--r-- 2 boincer umatlas    592400 Jan  9 07:11 input.tar.gz
[2026-01-09 10:09:41] -rw-r--r-- 1 boincer umatlas         0 Jan  9 07:11 boinc_lockfile
[2026-01-09 10:09:41] -rw-r--r-- 1 boincer umatlas      2520 Jan  9 07:12 pandaJob.out
[2026-01-09 10:09:41] -rw------- 1 boincer umatlas        57 Jan  9 07:12 setup.sh.local
[2026-01-09 10:09:41] -rw------- 1 boincer umatlas    989377 Jan  9 07:12 agis_schedconf.cvmfs.json
[2026-01-09 10:09:41] -rw------- 1 boincer umatlas   1516240 Jan  9 07:12 agis_ddmendpoints.agis.ALL.json
[2026-01-09 10:09:41] drwx------ 5 boincer umatlas      4096 Jan  9 07:12 pilot3
[2026-01-09 10:09:41] -rw------- 1 boincer umatlas 220504066 Jan  9 10:07 HITS.47898826._038879.pool.root.1
[2026-01-09 10:09:41] -rw-r--r-- 1 boincer umatlas       530 Jan  9 10:08 boinc_task_state.xml
[2026-01-09 10:09:41] -rw------- 1 boincer umatlas      1048 Jan  9 10:08 memory_monitor_summary.json
[2026-01-09 10:09:41] -rw------- 1 boincer umatlas    398763 Jan  9 10:08 log.47898826._038879.job.log.tgz.1
[2026-01-09 10:09:41] -rw------- 1 boincer umatlas      7845 Jan  9 10:08 heartbeat.json
[2026-01-09 10:09:41] -rw------- 1 boincer umatlas        95 Jan  9 10:09 pilot_heartbeat.json
[2026-01-09 10:09:41] -rw-r--r-- 1 boincer umatlas      5910 Jan  9 10:09 init_data.xml
[2026-01-09 10:09:41] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 10:09 boinc_mmap_file
[2026-01-09 10:09:41] -rw-r--r-- 1 boincer umatlas        28 Jan  9 10:09 wrapper_checkpoint.txt
[2026-01-09 10:09:41] -rw------- 1 boincer umatlas      4931 Jan  9 10:09 pilotlog.txt
[2026-01-09 10:09:41] -rw------- 1 boincer umatlas   1462851 Jan  9 10:09 log.47898826._038879.job.log.1
[2026-01-09 10:09:41] -rw------- 1 boincer umatlas       357 Jan  9 10:09 output.list
[2026-01-09 10:09:41] -rw-r--r-- 1 boincer umatlas       620 Jan  9 10:09 runtime_log
[2026-01-09 10:09:41] -rw------- 1 boincer umatlas   1884160 Jan  9 10:09 result.tar.gz
[2026-01-09 10:09:41] -rw------- 1 boincer umatlas       662 Jan  9 10:09 VTPKDmZFJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmFChKDmSJ0y2n.diag
[2026-01-09 10:09:41] -rw-r--r-- 1 boincer umatlas      9343 Jan  9 10:09 runtime_log.err
[2026-01-09 10:09:41] -rw-r--r-- 1 boincer umatlas     21281 Jan  9 10:09 stderr.txt
[2026-01-09 10:09:41] HITS file was successfully produced:
[2026-01-09 10:09:41] -rw------- 1 boincer umatlas 220504066 Jan  9 10:07 shared/HITS.pool.root.1
[2026-01-09 10:09:41]  *** Contents of shared directory: ***
[2026-01-09 10:09:41] total 435088
[2026-01-09 10:09:41] -rw-r--r-- 2 boincer umatlas 222526274 Jan  9 07:11 ATLAS.root_0
[2026-01-09 10:09:41] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 07:11 start_atlas.sh
[2026-01-09 10:09:41] -rw-r--r-- 2 boincer umatlas    592400 Jan  9 07:11 input.tar.gz
[2026-01-09 10:09:41] -rw------- 1 boincer umatlas 220504066 Jan  9 10:07 HITS.pool.root.1
[2026-01-09 10:09:41] -rw------- 1 boincer umatlas   1884160 Jan  9 10:09 result.tar.gz
10:09:43 (31243): run_atlas exited; CPU time 79714.913840
10:09:43 (31243): called boinc_finish(0)

</stderr_txt>
]]>

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