Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:31:37 (4027): wrapper (7.7.26015): starting
15:31:37 (4027): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 15:31:37] Arguments: --nthreads 8
[2026-01-09 15:31:37] Threads: 8
[2026-01-09 15:31:37] Checking for CVMFS
[2026-01-09 15:31:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 15:31:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 15:31:37] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 15:31:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 15:31:38] 2.11.2.0 24263 35539 121748 154946 2 56 14990605 25165825 0 130560 0 17514517 99.820 10849889 3264 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 15:31:38] CVMFS is ok
[2026-01-09 15:31:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 15:31:38] Checking for apptainer binary...
[2026-01-09 15:31:38] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 15:31:38] Running /usr/bin/apptainer --version
[2026-01-09 15:31:38] apptainer version 1.3.2-1.el7
[2026-01-09 15:31:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 15:31:39] cg-vwn484.simple-grid.lan
[2026-01-09 15:31:39] apptainer works
[2026-01-09 15:31:39] Set ATHENA_PROC_NUMBER=8
[2026-01-09 15:31:39] Set ATHENA_CORE_NUMBER=8
[2026-01-09 15:31:39] Starting ATLAS job with PandaID=6963190043
[2026-01-09 15:31:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 18:01:14]  *** The last 200 lines of the pilot log: ***
[2026-01-09 18:01:14] 2026-01-09 17:00:08,364 | INFO     | time since job start (8894s) is within the limit (349056.0s)
[2026-01-09 18:01:14] 2026-01-09 17:00:08,612 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 18:01:14] 2026-01-09 17:00:08,613 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2026-01-09 18:01:14] 2026-01-09 17:00:08,614 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-6963190043/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 18:01:14] 2026-01-09 17:00:08,615 | INFO     | extracted standard info from prmon json
[2026-01-09 18:01:14] 2026-01-09 17:00:08,615 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 18:01:14] 2026-01-09 17:00:08,615 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 18:01:14] 2026-01-09 17:00:08,616 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 18:01:14] 2026-01-09 17:00:08,616 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 18:01:14] 2026-01-09 17:00:08,619 | INFO     | fitting pss+swap vs Time
[2026-01-09 18:01:14] 2026-01-09 17:00:08,620 | INFO     | sum of square deviations: 964976232.5
[2026-01-09 18:01:14] 2026-01-09 17:00:08,621 | INFO     | sum of deviations: -9995498460.5
[2026-01-09 18:01:14] 2026-01-09 17:00:08,621 | INFO     | mean x: 1767973566.5
[2026-01-09 18:01:14] 2026-01-09 17:00:08,621 | INFO     | mean y: 2510162.801369863
[2026-01-09 18:01:14] 2026-01-09 17:00:08,621 | INFO     | intersect: 18315683551.924652
[2026-01-09 18:01:14] 2026-01-09 17:00:08,621 | INFO     | chi2: 2.4042689208062233
[2026-01-09 18:01:14] 2026-01-09 17:00:08,622 | INFO     | sum of square deviations: 869188390.0
[2026-01-09 18:01:14] 2026-01-09 17:00:08,623 | INFO     | sum of deviations: 76358518.99998778
[2026-01-09 18:01:14] 2026-01-09 17:00:08,623 | INFO     | mean x: 1767973414.0
[2026-01-09 18:01:14] 2026-01-09 17:00:08,623 | INFO     | mean y: 2525772.269503546
[2026-01-09 18:01:14] 2026-01-09 17:00:08,623 | INFO     | intersect: -152791340.88750982
[2026-01-09 18:01:14] 2026-01-09 17:00:08,623 | INFO     | chi2: 1.6430290410406094
[2026-01-09 18:01:14] 2026-01-09 17:00:08,623 | INFO     | current chi2=1.6430290410406094 (change=31.66201056703538 %)
[2026-01-09 18:01:14] 2026-01-09 17:00:08,624 | INFO     | sum of square deviations: 779958810.0
[2026-01-09 18:01:14] 2026-01-09 17:00:08,625 | INFO     | sum of deviations: 321399484.0
[2026-01-09 18:01:14] 2026-01-09 17:00:08,625 | INFO     | mean x: 1767973261.5
[2026-01-09 18:01:14] 2026-01-09 17:00:08,625 | INFO     | mean y: 2526191.25
[2026-01-09 18:01:14] 2026-01-09 17:00:08,625 | INFO     | intersect: -726006760.345094
[2026-01-09 18:01:14] 2026-01-09 17:00:08,625 | INFO     | chi2: 1.6439827440560744
[2026-01-09 18:01:14] 2026-01-09 17:00:08,625 | INFO     | current chi2=1.6439827440560744 (change=-0.05804541439273094 %)
[2026-01-09 18:01:14] 2026-01-09 17:00:08,625 | INFO     | right removable region: 135
[2026-01-09 18:01:14] 2026-01-09 17:00:08,626 | INFO     | sum of square deviations: 869188390.0
[2026-01-09 18:01:14] 2026-01-09 17:00:08,627 | INFO     | sum of deviations: -31830366568.0
[2026-01-09 18:01:14] 2026-01-09 17:00:08,627 | INFO     | mean x: 1767973719.0
[2026-01-09 18:01:14] 2026-01-09 17:00:08,627 | INFO     | mean y: 2544363.3191489363
[2026-01-09 18:01:14] 2026-01-09 17:00:08,627 | INFO     | intersect: 64747140823.426285
[2026-01-09 18:01:14] 2026-01-09 17:00:08,627 | INFO     | chi2: 0.9364282528045017
[2026-01-09 18:01:14] 2026-01-09 17:00:08,627 | INFO     | current chi2=0.9364282528045017 (change=61.05143460863399 %)
[2026-01-09 18:01:14] 2026-01-09 17:00:08,628 | INFO     | sum of square deviations: 779958810.0
[2026-01-09 18:01:14] 2026-01-09 17:00:08,629 | INFO     | sum of deviations: -29361206067.0
[2026-01-09 18:01:14] 2026-01-09 17:00:08,629 | INFO     | mean x: 1767973871.5
[2026-01-09 18:01:14] 2026-01-09 17:00:08,629 | INFO     | mean y: 2540069.5735294116
[2026-01-09 18:01:14] 2026-01-09 17:00:08,629 | INFO     | intersect: 66557138205.57417
[2026-01-09 18:01:14] 2026-01-09 17:00:08,629 | INFO     | chi2: 0.9263221686835124
[2026-01-09 18:01:14] 2026-01-09 17:00:08,629 | INFO     | current chi2=0.9263221686835124 (change=1.0792160628134309 %)
[2026-01-09 18:01:14] 2026-01-09 17:00:08,629 | INFO     | left removable region: 20
[2026-01-09 18:01:14] 2026-01-09 17:00:08,630 | INFO     | sum of square deviations: 471562330.0
[2026-01-09 18:01:14] 2026-01-09 17:00:08,630 | INFO     | sum of deviations: -10084887830.0
[2026-01-09 18:01:14] 2026-01-09 17:00:08,631 | INFO     | mean x: 1767973841.0
[2026-01-09 18:01:14] 2026-01-09 17:00:08,631 | INFO     | mean y: 2541351.782608696
[2026-01-09 18:01:14] 2026-01-09 17:00:08,631 | INFO     | intersect: 37812639272.155624
[2026-01-09 18:01:14] 2026-01-09 17:00:08,631 | INFO     | chi2: 0.10147086465211339
[2026-01-09 18:01:14] 2026-01-09 17:00:08,631 | INFO     | current memory leak: -21.39 B/s (using 115 data points, chi2=0.10)
[2026-01-09 18:01:14] 2026-01-09 17:00:08,632 | INFO     | could have reported an average CPU frequency of 2249 MHz (8 samples)
[2026-01-09 18:01:14] 2026-01-09 17:00:08,632 | INFO     | ..............................
[2026-01-09 18:01:14] 2026-01-09 17:00:08,632 | INFO     | . Timing measurements:
[2026-01-09 18:01:14] 2026-01-09 17:00:08,632 | INFO     | . get job = 0 s
[2026-01-09 18:01:14] 2026-01-09 17:00:08,632 | INFO     | . initial setup = 1 s
[2026-01-09 18:01:14] 2026-01-09 17:00:08,633 | INFO     | . payload setup = 7 s
[2026-01-09 18:01:14] 2026-01-09 17:00:08,633 | INFO     | . stage-in = 0 s
[2026-01-09 18:01:14] 2026-01-09 17:00:08,633 | INFO     | . payload execution = 8856 s
[2026-01-09 18:01:14] 2026-01-09 17:00:08,633 | INFO     | . stage-out = 0 s
[2026-01-09 18:01:14] 2026-01-09 17:00:08,633 | INFO     | . log creation = 0 s
[2026-01-09 18:01:14] 2026-01-09 17:00:08,633 | INFO     | ..............................
[2026-01-09 18:01:14] 2026-01-09 17:00:08,740 | INFO     | 
[2026-01-09 18:01:14] 2026-01-09 17:00:08,741 | INFO     | job summary report
[2026-01-09 18:01:14] 2026-01-09 17:00:08,741 | INFO     | --------------------------------------------------
[2026-01-09 18:01:14] 2026-01-09 17:00:08,741 | INFO     | PanDA job id: 6963190043
[2026-01-09 18:01:14] 2026-01-09 17:00:08,741 | INFO     | task id: 47898826
[2026-01-09 18:01:14] 2026-01-09 17:00:08,741 | INFO     | errors: (none)
[2026-01-09 18:01:14] 2026-01-09 17:00:08,741 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 18:01:14] 2026-01-09 17:00:08,741 | INFO     | pilot state: finished 
[2026-01-09 18:01:14] 2026-01-09 17:00:08,741 | INFO     | transexitcode: 0
[2026-01-09 18:01:14] 2026-01-09 17:00:08,741 | INFO     | exeerrorcode: 0
[2026-01-09 18:01:14] 2026-01-09 17:00:08,741 | INFO     | exeerrordiag: 
[2026-01-09 18:01:14] 2026-01-09 17:00:08,742 | INFO     | exitcode: 0
[2026-01-09 18:01:14] 2026-01-09 17:00:08,742 | INFO     | exitmsg: OK
[2026-01-09 18:01:14] 2026-01-09 17:00:08,742 | INFO     | cpuconsumptiontime: 67634 s
[2026-01-09 18:01:14] 2026-01-09 17:00:08,742 | INFO     | nevents: 400
[2026-01-09 18:01:14] 2026-01-09 17:00:08,742 | INFO     | neventsw: 0
[2026-01-09 18:01:14] 2026-01-09 17:00:08,742 | INFO     | pid: 14203
[2026-01-09 18:01:14] 2026-01-09 17:00:08,742 | INFO     | pgrp: 14203
[2026-01-09 18:01:14] 2026-01-09 17:00:08,742 | INFO     | corecount: 8
[2026-01-09 18:01:14] 2026-01-09 17:00:08,742 | INFO     | event service: False
[2026-01-09 18:01:14] 2026-01-09 17:00:08,742 | INFO     | sizes: {0: 2283972, 5: 2284234, 11: 2284290, 8867: 2312058, 8869: 2321058, 8871: 2321114, 8878: 2321436}
[2026-01-09 18:01:14] 2026-01-09 17:00:08,743 | INFO     | --------------------------------------------------
[2026-01-09 18:01:14] 2026-01-09 17:00:08,743 | INFO     | 
[2026-01-09 18:01:14] 2026-01-09 17:00:08,743 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2026-01-09 18:01:14] 2026-01-09 17:00:08,781 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 18:01:14] 2026-01-09 17:00:08,781 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 18:01:14] 2026-01-09 17:00:08,781 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 18:01:14] 2026-01-09 17:00:08,781 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 18:01:14] 2026-01-09 17:00:08,781 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 18:01:14] 2026-01-09 17:00:08,782 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 18:01:14] 2026-01-09 17:00:08,782 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 18:01:14] 2026-01-09 17:00:08,782 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 18:01:14] 2026-01-09 17:00:08,782 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 18:01:14] 2026-01-09 17:00:08,782 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 18:01:14] 2026-01-09 17:00:08,782 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 18:01:14] 2026-01-09 17:00:08,782 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 18:01:14] 2026-01-09 17:00:08,782 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 18:01:14] 2026-01-09 17:00:08,782 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 18:01:14] 2026-01-09 17:00:08,783 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 18:01:14] 2026-01-09 17:00:08,783 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 18:01:14] 2026-01-09 17:00:08,783 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 18:01:14] 2026-01-09 17:00:08,783 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 18:01:14] 2026-01-09 17:00:08,783 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 18:01:14] 2026-01-09 17:00:08,783 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 18:01:14] 2026-01-09 17:00:08,783 | INFO     | job 6963190043 has completed (purged errors)
[2026-01-09 18:01:14] 2026-01-09 17:00:08,783 | INFO     | overall cleanup function is called
[2026-01-09 18:01:14] 2026-01-09 17:00:09,791 | INFO     | --- collectZombieJob: --- 10, [14203]
[2026-01-09 18:01:14] 2026-01-09 17:00:09,792 | INFO     | zombie collector waiting for pid 14203
[2026-01-09 18:01:14] 2026-01-09 17:00:09,792 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 18:01:14] 2026-01-09 17:00:09,792 | INFO     | collected zombie processes
[2026-01-09 18:01:14] 2026-01-09 17:00:09,792 | INFO     | will attempt to kill all subprocesses of pid=14203
[2026-01-09 18:01:14] 2026-01-09 17:00:09,850 | INFO     | process IDs to be killed: [14203] (in reverse order)
[2026-01-09 18:01:14] 2026-01-09 17:00:09,892 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 18:01:14] 2026-01-09 17:00:09,892 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 18:01:14] 2026-01-09 17:00:09,894 | INFO     | did not find any defunct processes belonging to 14203
[2026-01-09 18:01:14] 2026-01-09 17:00:09,895 | INFO     | did not find any defunct processes belonging to 14203
[2026-01-09 18:01:14] 2026-01-09 17:00:09,896 | INFO     | ready for new job
[2026-01-09 18:01:14] 2026-01-09 17:00:09,896 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 18:01:14] 2026-01-09 17:00:09,897 | INFO     | ***************************************
[2026-01-09 18:01:14] 2026-01-09 17:00:09,897 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 18:01:14] 2026-01-09 17:00:09,898 | INFO     | ***************************************
[2026-01-09 18:01:14] 2026-01-09 17:00:09,898 | INFO     | 
[2026-01-09 18:01:14] 2026-01-09 17:00:09,898 | INFO     | pilot is running in a VM
[2026-01-09 18:01:14] 2026-01-09 17:00:09,898 | INFO     | architecture information:
[2026-01-09 18:01:14] 2026-01-09 17:00:09,899 | INFO     | executing command: cat /etc/os-release
[2026-01-09 18:01:14] 2026-01-09 17:00:09,915 | INFO     | cat /etc/os-release:
[2026-01-09 18:01:14] NAME="CentOS Linux"
[2026-01-09 18:01:14] VERSION="7 (Core)"
[2026-01-09 18:01:14] ID="centos"
[2026-01-09 18:01:14] ID_LIKE="rhel fedora"
[2026-01-09 18:01:14] VERSION_ID="7"
[2026-01-09 18:01:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 18:01:14] ANSI_COLOR="0;31"
[2026-01-09 18:01:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 18:01:14] HOME_URL="https://www.centos.org/"
[2026-01-09 18:01:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 18:01:14] 
[2026-01-09 18:01:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 18:01:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 18:01:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 18:01:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 18:01:14] 
[2026-01-09 18:01:14] 2026-01-09 17:00:09,915 | INFO     | ***************************************
[2026-01-09 18:01:14] 2026-01-09 17:00:10,419 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2026-01-09 18:01:14] 2026-01-09 17:00:10,436 | INFO     | sufficient remaining disk space (498289606656 B)
[2026-01-09 18:01:14] 2026-01-09 17:00:10,436 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 18:01:14] 2026-01-09 17:00:10,437 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 18:01:14] 2026-01-09 17:00:10,437 | INFO     | update_server=False
[2026-01-09 18:01:14] 2026-01-09 17:00:10,437 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 18:01:14] 2026-01-09 17:00:10,437 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 18:01:14] 2026-01-09 17:00:10,438 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 18:01:14] 2026-01-09 17:00:10,438 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 18:01:14] 2026-01-09 17:00:10,439 | INFO     | aborting loop
[2026-01-09 18:01:14] 2026-01-09 17:00:10,619 | INFO     | all data control threads have been joined
[2026-01-09 18:01:14] 2026-01-09 17:00:11,083 | INFO     | all payload control threads have been joined
[2026-01-09 18:01:14] 2026-01-09 17:00:11,442 | INFO     | [job] retrieve thread has finished
[2026-01-09 18:01:14] 2026-01-09 17:00:11,444 | INFO     | [job] queue monitor thread has finished
[2026-01-09 18:01:14] 2026-01-09 17:00:11,445 | INFO     | [job] job monitor thread has finished
[2026-01-09 18:01:14] 2026-01-09 17:00:11,449 | INFO     | [data] copytool_in thread has finished
[2026-01-09 18:01:14] 2026-01-09 17:00:11,560 | INFO     | [payload] failed_post thread has finished
[2026-01-09 18:01:14] 2026-01-09 17:00:11,625 | INFO     | [data] control thread has finished
[2026-01-09 18:01:14] 2026-01-09 17:00:11,679 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 18:01:14] 2026-01-09 17:00:11,737 | INFO     | all job control threads have been joined
[2026-01-09 18:01:14] 2026-01-09 17:00:12,088 | INFO     | [payload] control thread has finished
[2026-01-09 18:01:14] 2026-01-09 17:00:12,324 | INFO     | [job] validate thread has finished
[2026-01-09 18:01:14] 2026-01-09 17:00:12,338 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 18:01:14] 2026-01-09 17:00:12,445 | INFO     | [data] copytool_out thread has finished
[2026-01-09 18:01:14] 2026-01-09 17:00:12,579 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 18:01:14] 2026-01-09 17:00:12,618 | INFO     | [payload] validate_post thread has finished
[2026-01-09 18:01:14] 2026-01-09 17:00:12,683 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 18:01:14] 2026-01-09 17:00:12,743 | INFO     | [job] control thread has finished
[2026-01-09 18:01:14] 2026-01-09 17:00:16,345 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 18:01:14] 2026-01-09 17:00:21,258 | INFO     | job.realtimelogging is not enabled
[2026-01-09 18:01:14] 2026-01-09 17:00:22,264 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 18:01:14] 2026-01-09 17:00:41,446 | INFO     | PID=7749 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-09 18:01:14] 2026-01-09 17:00:41,447 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 18:01:14] 2026-01-09 17:00:41,447 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 18:01:14] 2026-01-09 17:00:41,447 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 18:01:14] 2026-01-09 17:01:08,565 | INFO     | [monitor] cgroup control has ended
[2026-01-09 18:01:14] 2026-01-09 17:01:09,193 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140707866199872)>', '<ExcThread(monitor, started 140707639211776)>']
[2026-01-09 18:01:14] 2026-01-09 17:01:09,571 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 18:01:14] 2026-01-09 17:01:09,571 | INFO     | [monitor] control thread has ended
[2026-01-09 18:01:14] 2026-01-09 17:01:14,219 | INFO     | all workflow threads have been joined
[2026-01-09 18:01:14] 2026-01-09 17:01:14,219 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 18:01:14] 2026-01-09 17:01:14,219 | INFO     | traces error code: 0
[2026-01-09 18:01:14] 2026-01-09 17:01:14,220 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 18:01:14] 2026-01-09 17:01:14,344 [wrapper] ==== pilot stdout END ====
[2026-01-09 18:01:14] 2026-01-09 17:01:14,348 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 18:01:14] 2026-01-09 17:01:14,351 [wrapper] pilotpid: 7749
[2026-01-09 18:01:14] 2026-01-09 17:01:14,355 [wrapper] Pilot exit status: 0
[2026-01-09 18:01:14] 2026-01-09 17:01:14,370 [wrapper] pandaids: 6963190043
[2026-01-09 18:01:14] 2026-01-09 17:01:14,405 [wrapper] cleanup supervisor_pilot 30619 7750
[2026-01-09 18:01:14] 2026-01-09 17:01:14,409 [wrapper] Test setup, not cleaning
[2026-01-09 18:01:14] 2026-01-09 17:01:14,419 [wrapper] apfmon messages muted
[2026-01-09 18:01:14] 2026-01-09 17:01:14,423 [wrapper] ==== wrapper stdout END ====
[2026-01-09 18:01:14] 2026-01-09 17:01:14,426 [wrapper] ==== wrapper stderr END ====
[2026-01-09 18:01:14]  *** Error codes and diagnostics ***
[2026-01-09 18:01:14]     "exeErrorCode": 0,
[2026-01-09 18:01:14]     "exeErrorDiag": "",
[2026-01-09 18:01:14]     "pilotErrorCode": 0,
[2026-01-09 18:01:14]     "pilotErrorDiag": "",
[2026-01-09 18:01:14]  *** Listing of results directory ***
[2026-01-09 18:01:14] total 436752
[2026-01-09 18:01:14] -rw-r--r--. 1 boinc boinc    579449 Jan  9 05:21 pilot3.tar.gz
[2026-01-09 18:01:14] -rwx------. 1 boinc boinc     36322 Jan  9 05:25 runpilot2-wrapper.sh
[2026-01-09 18:01:14] -rw-r--r--. 1 boinc boinc      5112 Jan  9 05:30 queuedata.json
[2026-01-09 18:01:14] -rw-r--r--. 1 boinc boinc       100 Jan  9 15:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 18:01:14] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 15:31 run_atlas
[2026-01-09 18:01:14] -rw-r--r--. 1 boinc boinc       105 Jan  9 15:31 job.xml
[2026-01-09 18:01:14] -rw-r--r--. 1 boinc boinc      6392 Jan  9 15:31 init_data.xml
[2026-01-09 18:01:14] -rw-r--r--. 2 boinc boinc 223326363 Jan  9 15:31 EVNT.47898824._001484.pool.root.1
[2026-01-09 18:01:14] -rw-r--r--. 2 boinc boinc     15847 Jan  9 15:31 start_atlas.sh
[2026-01-09 18:01:14] drwxrwx--x. 2 boinc boinc        68 Jan  9 15:31 shared
[2026-01-09 18:01:14] -rw-r--r--. 2 boinc boinc    592397 Jan  9 15:31 input.tar.gz
[2026-01-09 18:01:14] -rw-r--r--. 1 boinc boinc         0 Jan  9 15:31 boinc_lockfile
[2026-01-09 18:01:14] -rw-r--r--. 1 boinc boinc      2520 Jan  9 15:31 pandaJob.out
[2026-01-09 18:01:14] -rw-------. 1 boinc boinc    989377 Jan  9 15:31 agis_schedconf.cvmfs.json
[2026-01-09 18:01:14] -rw-------. 1 boinc boinc   1516240 Jan  9 15:31 agis_ddmendpoints.agis.ALL.json
[2026-01-09 18:01:14] drwx------. 5 boinc boinc      4096 Jan  9 15:31 pilot3
[2026-01-09 18:01:14] -rw-------. 1 boinc boinc 216886537 Jan  9 17:59 HITS.47898826._038628.pool.root.1
[2026-01-09 18:01:14] -rw-r--r--. 1 boinc boinc       530 Jan  9 17:59 boinc_task_state.xml
[2026-01-09 18:01:14] -rw-------. 1 boinc boinc      1014 Jan  9 17:59 memory_monitor_summary.json
[2026-01-09 18:01:14] -rw-------. 1 boinc boinc    369095 Jan  9 17:59 log.47898826._038628.job.log.tgz.1
[2026-01-09 18:01:14] -rw-------. 1 boinc boinc      7770 Jan  9 18:00 heartbeat.json
[2026-01-09 18:01:14] -rw-------. 1 boinc boinc        95 Jan  9 18:00 pilot_heartbeat.json
[2026-01-09 18:01:14] -rw-r--r--. 1 boinc boinc      8192 Jan  9 18:01 boinc_mmap_file
[2026-01-09 18:01:14] -rw-r--r--. 1 boinc boinc        27 Jan  9 18:01 wrapper_checkpoint.txt
[2026-01-09 18:01:14] -rw-------. 1 boinc boinc      4881 Jan  9 18:01 pilotlog.txt
[2026-01-09 18:01:14] -rw-------. 1 boinc boinc   1193749 Jan  9 18:01 log.47898826._038628.job.log.1
[2026-01-09 18:01:14] -rw-------. 1 boinc boinc       357 Jan  9 18:01 output.list
[2026-01-09 18:01:14] -rw-r--r--. 1 boinc boinc       620 Jan  9 18:01 runtime_log
[2026-01-09 18:01:14] -rw-------. 1 boinc boinc   1576960 Jan  9 18:01 result.tar.gz
[2026-01-09 18:01:14] -rw-r--r--. 1 boinc boinc      8832 Jan  9 18:01 runtime_log.err
[2026-01-09 18:01:14] -rw-------. 1 boinc boinc       652 Jan  9 18:01 GoTNDmYFJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmSBhKDm89DPmn.diag
[2026-01-09 18:01:14] -rw-r--r--. 1 boinc boinc     20682 Jan  9 18:01 stderr.txt
[2026-01-09 18:01:14] HITS file was successfully produced:
[2026-01-09 18:01:14] -rw-------. 1 boinc boinc 216886537 Jan  9 17:59 shared/HITS.pool.root.1
[2026-01-09 18:01:14]  *** Contents of shared directory: ***
[2026-01-09 18:01:14] total 432036
[2026-01-09 18:01:14] -rw-r--r--. 2 boinc boinc 223326363 Jan  9 15:31 ATLAS.root_0
[2026-01-09 18:01:14] -rw-r--r--. 2 boinc boinc     15847 Jan  9 15:31 start_atlas.sh
[2026-01-09 18:01:14] -rw-r--r--. 2 boinc boinc    592397 Jan  9 15:31 input.tar.gz
[2026-01-09 18:01:14] -rw-------. 1 boinc boinc 216886537 Jan  9 17:59 HITS.pool.root.1
[2026-01-09 18:01:14] -rw-------. 1 boinc boinc   1576960 Jan  9 18:01 result.tar.gz
18:01:16 (4027): run_atlas exited; CPU time 67688.406247
18:01:16 (4027): called boinc_finish(0)

</stderr_txt>
]]>

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