Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:51:03 (459802): wrapper (7.7.26015): starting
09:51:03 (459802): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 09:51:03] Arguments: --nthreads 8
[2026-01-09 09:51:03] Threads: 8
[2026-01-09 09:51:03] Checking for CVMFS
[2026-01-09 09:51:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 09:51:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 09:51:04] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 09:51:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 09:51:25] 2.13.3.0 10749 49867 487896 154946 3 140 17626102 32935936 56434 16776704 0 522850650 99.785 281491515 29022 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 09:51:25] CVMFS is ok
[2026-01-09 09:51:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 09:51:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 09:51:25] Further information can be found at the LHC@home message board.
[2026-01-09 09:51:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 09:51:25] Checking for apptainer binary...
[2026-01-09 09:51:25] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 09:51:25] Running /usr/bin/apptainer --version
[2026-01-09 09:51:25] apptainer version 1.4.5-2.el9
[2026-01-09 09:51:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 09:51:26] lc-12-33.aglt2.org
[2026-01-09 09:51:26] apptainer works
[2026-01-09 09:51:26] Set ATHENA_PROC_NUMBER=8
[2026-01-09 09:51:26] Set ATHENA_CORE_NUMBER=8
[2026-01-09 09:51:26] Starting ATLAS job with PandaID=6963189166
[2026-01-09 09:51:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 14:45:37]  *** The last 200 lines of the pilot log: ***
[2026-01-09 14:45:37] 2026-01-09 19:44:30,424 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 14:45:37] 2026-01-09 19:44:30,928 | INFO     | time since job start (17493s) is within the limit (349056.0s)
[2026-01-09 14:45:37] 2026-01-09 19:44:32,944 | INFO     | monitor loop #941: job 0:6963189166 is in state 'finished'
[2026-01-09 14:45:37] 2026-01-09 19:44:32,944 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 14:45:37] 2026-01-09 19:44:32,947 | INFO     | time since job start (17495s) is within the limit (349056.0s)
[2026-01-09 14:45:37] 2026-01-09 19:44:34,955 | INFO     | time since job start (17497s) is within the limit (349056.0s)
[2026-01-09 14:45:37] 2026-01-09 19:44:35,453 | INFO     | monitor loop #942: job 0:6963189166 is in state 'finished'
[2026-01-09 14:45:37] 2026-01-09 19:44:35,453 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 14:45:37] 2026-01-09 19:44:36,983 | INFO     | time since job start (17499s) is within the limit (349056.0s)
[2026-01-09 14:45:37] 2026-01-09 19:44:37,334 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 14:45:37] 2026-01-09 19:44:37,351 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2883.941375
[2026-01-09 14:45:37] 2026-01-09 19:44:37,422 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963189166/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 14:45:37] 2026-01-09 19:44:37,422 | INFO     | extracted standard info from prmon json
[2026-01-09 14:45:37] 2026-01-09 19:44:37,423 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 14:45:37] 2026-01-09 19:44:37,423 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 14:45:37] 2026-01-09 19:44:37,423 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 14:45:37] 2026-01-09 19:44:37,423 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 14:45:37] 2026-01-09 19:44:37,432 | INFO     | fitting pss+swap vs Time
[2026-01-09 14:45:37] 2026-01-09 19:44:37,443 | INFO     | sum of square deviations: 7102889513.616193
[2026-01-09 14:45:37] 2026-01-09 19:44:37,445 | INFO     | sum of deviations: 102425739011.73259
[2026-01-09 14:45:37] 2026-01-09 19:44:37,445 | INFO     | mean x: 1767979159.890845
[2026-01-09 14:45:37] 2026-01-09 19:44:37,445 | INFO     | mean y: 2463922.2816901407
[2026-01-09 14:45:37] 2026-01-09 19:44:37,445 | INFO     | intersect: -25492311360.65354
[2026-01-09 14:45:37] 2026-01-09 19:44:37,446 | INFO     | chi2: 3.82549513408719
[2026-01-09 14:45:37] 2026-01-09 19:44:37,446 | INFO     | sum of square deviations: 6734322510.630842
[2026-01-09 14:45:37] 2026-01-09 19:44:37,468 | INFO     | sum of deviations: 118399671371.98563
[2026-01-09 14:45:37] 2026-01-09 19:44:37,468 | INFO     | mean x: 1767979007.3942652
[2026-01-09 14:45:37] 2026-01-09 19:44:37,468 | INFO     | mean y: 2470426.4910394265
[2026-01-09 14:45:37] 2026-01-09 19:44:37,468 | INFO     | intersect: -31081299787.603054
[2026-01-09 14:45:37] 2026-01-09 19:44:37,469 | INFO     | chi2: 3.142998721683435
[2026-01-09 14:45:37] 2026-01-09 19:44:37,469 | INFO     | current chi2=3.142998721683435 (change=17.84073403524552 %)
[2026-01-09 14:45:37] 2026-01-09 19:44:37,469 | INFO     | right removable region: 278
[2026-01-09 14:45:37] 2026-01-09 19:44:37,470 | INFO     | sum of square deviations: 6734306284.415782
[2026-01-09 14:45:37] 2026-01-09 19:44:37,471 | INFO     | sum of deviations: 27198513577.02147
[2026-01-09 14:45:37] 2026-01-09 19:44:37,472 | INFO     | mean x: 1767979312.390681
[2026-01-09 14:45:37] 2026-01-09 19:44:37,472 | INFO     | mean y: 2494972.623655914
[2026-01-09 14:45:37] 2026-01-09 19:44:37,472 | INFO     | intersect: -7138019179.996689
[2026-01-09 14:45:37] 2026-01-09 19:44:37,477 | INFO     | chi2: 1.1213628955961532
[2026-01-09 14:45:37] 2026-01-09 19:44:37,477 | INFO     | current chi2=1.1213628955961532 (change=70.68711745038662 %)
[2026-01-09 14:45:37] 2026-01-09 19:44:37,478 | INFO     | sum of square deviations: 6378666371.138691
[2026-01-09 14:45:37] 2026-01-09 19:44:37,480 | INFO     | sum of deviations: 8518777289.102188
[2026-01-09 14:45:37] 2026-01-09 19:44:37,480 | INFO     | mean x: 1767979464.8978102
[2026-01-09 14:45:37] 2026-01-09 19:44:37,480 | INFO     | mean y: 2502943.5036496352
[2026-01-09 14:45:37] 2026-01-09 19:44:37,480 | INFO     | intersect: -2358652576.608916
[2026-01-09 14:45:37] 2026-01-09 19:44:37,480 | INFO     | chi2: 0.9285705701244032
[2026-01-09 14:45:37] 2026-01-09 19:44:37,481 | INFO     | current chi2=0.9285705701244032 (change=17.192679214631518 %)
[2026-01-09 14:45:37] 2026-01-09 19:44:37,481 | INFO     | left removable region: 20
[2026-01-09 14:45:37] 2026-01-09 19:44:37,481 | INFO     | sum of square deviations: 5325244494.577508
[2026-01-09 14:45:37] 2026-01-09 19:44:37,493 | INFO     | sum of deviations: 8237178740.802324
[2026-01-09 14:45:37] 2026-01-09 19:44:37,493 | INFO     | mean x: 1767979586.9031007
[2026-01-09 14:45:37] 2026-01-09 19:44:37,493 | INFO     | mean y: 2518584.8720930233
[2026-01-09 14:45:37] 2026-01-09 19:44:37,493 | INFO     | intersect: -2732222304.91049
[2026-01-09 14:45:37] 2026-01-09 19:44:37,494 | INFO     | chi2: 0.15841209428310443
[2026-01-09 14:45:37] 2026-01-09 19:44:37,494 | INFO     | current memory leak: 1.55 B/s (using 258 data points, chi2=0.16)
[2026-01-09 14:45:37] 2026-01-09 19:44:37,494 | INFO     | could have reported an average CPU frequency of 2873 MHz (13 samples)
[2026-01-09 14:45:37] 2026-01-09 19:44:37,495 | INFO     | ..............................
[2026-01-09 14:45:37] 2026-01-09 19:44:37,495 | INFO     | . Timing measurements:
[2026-01-09 14:45:37] 2026-01-09 19:44:37,495 | INFO     | . get job = 0 s
[2026-01-09 14:45:37] 2026-01-09 19:44:37,495 | INFO     | . initial setup = 7 s
[2026-01-09 14:45:37] 2026-01-09 19:44:37,495 | INFO     | . payload setup = 48 s
[2026-01-09 14:45:37] 2026-01-09 19:44:37,495 | INFO     | . stage-in = 0 s
[2026-01-09 14:45:37] 2026-01-09 19:44:37,495 | INFO     | . payload execution = 17333 s
[2026-01-09 14:45:37] 2026-01-09 19:44:37,495 | INFO     | . stage-out = 3 s
[2026-01-09 14:45:37] 2026-01-09 19:44:37,495 | INFO     | . log creation = 0 s
[2026-01-09 14:45:37] 2026-01-09 19:44:37,508 | INFO     | ..............................
[2026-01-09 14:45:37] 2026-01-09 19:44:37,903 | INFO     | 
[2026-01-09 14:45:37] 2026-01-09 19:44:37,904 | INFO     | job summary report
[2026-01-09 14:45:37] 2026-01-09 19:44:37,904 | INFO     | --------------------------------------------------
[2026-01-09 14:45:37] 2026-01-09 19:44:37,904 | INFO     | PanDA job id: 6963189166
[2026-01-09 14:45:37] 2026-01-09 19:44:37,904 | INFO     | task id: 47898826
[2026-01-09 14:45:37] 2026-01-09 19:44:37,904 | INFO     | errors: (none)
[2026-01-09 14:45:37] 2026-01-09 19:44:37,904 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 14:45:37] 2026-01-09 19:44:37,904 | INFO     | pilot state: finished 
[2026-01-09 14:45:37] 2026-01-09 19:44:37,904 | INFO     | transexitcode: 0
[2026-01-09 14:45:37] 2026-01-09 19:44:37,904 | INFO     | exeerrorcode: 0
[2026-01-09 14:45:37] 2026-01-09 19:44:37,904 | INFO     | exeerrordiag: 
[2026-01-09 14:45:37] 2026-01-09 19:44:37,904 | INFO     | exitcode: 0
[2026-01-09 14:45:37] 2026-01-09 19:44:37,904 | INFO     | exitmsg: OK
[2026-01-09 14:45:37] 2026-01-09 19:44:37,904 | INFO     | cpuconsumptiontime: 57229 s
[2026-01-09 14:45:37] 2026-01-09 19:44:37,904 | INFO     | nevents: 400
[2026-01-09 14:45:37] 2026-01-09 19:44:37,904 | INFO     | neventsw: 0
[2026-01-09 14:45:37] 2026-01-09 19:44:37,905 | INFO     | pid: 526099
[2026-01-09 14:45:37] 2026-01-09 19:44:37,905 | INFO     | pgrp: 526099
[2026-01-09 14:45:37] 2026-01-09 19:44:37,905 | INFO     | corecount: 8
[2026-01-09 14:45:37] 2026-01-09 19:44:37,905 | INFO     | event service: False
[2026-01-09 14:45:37] 2026-01-09 19:44:37,905 | INFO     | sizes: {0: 2283143, 1: 2283828, 2: 2284027, 13: 2284027, 24: 2284083, 33: 2284373, 35: 2284557, 17387: 2316398, 17392: 2325452, 17433: 2325590}
[2026-01-09 14:45:37] 2026-01-09 19:44:37,905 | INFO     | --------------------------------------------------
[2026-01-09 14:45:37] 2026-01-09 19:44:37,905 | INFO     | 
[2026-01-09 14:45:37] 2026-01-09 19:44:37,905 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-09 14:45:37] 2026-01-09 19:44:37,999 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 14:45:37] 2026-01-09 19:44:37,999 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 14:45:37] 2026-01-09 19:44:37,999 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 14:45:37] 2026-01-09 19:44:37,999 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 14:45:37] 2026-01-09 19:44:37,999 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 14:45:37] 2026-01-09 19:44:37,999 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 14:45:37] 2026-01-09 19:44:37,999 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 14:45:37] 2026-01-09 19:44:38,000 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 14:45:37] 2026-01-09 19:44:38,000 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 14:45:37] 2026-01-09 19:44:38,000 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 14:45:37] 2026-01-09 19:44:38,000 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 14:45:37] 2026-01-09 19:44:38,000 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 14:45:37] 2026-01-09 19:44:38,000 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 14:45:37] 2026-01-09 19:44:38,000 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 14:45:37] 2026-01-09 19:44:38,000 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 14:45:37] 2026-01-09 19:44:38,000 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 14:45:37] 2026-01-09 19:44:38,000 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 14:45:37] 2026-01-09 19:44:38,000 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 14:45:37] 2026-01-09 19:44:38,001 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 14:45:37] 2026-01-09 19:44:38,001 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 14:45:37] 2026-01-09 19:44:38,001 | INFO     | job 6963189166 has completed (purged errors)
[2026-01-09 14:45:37] 2026-01-09 19:44:38,001 | INFO     | overall cleanup function is called
[2026-01-09 14:45:37] 2026-01-09 19:44:39,023 | INFO     | --- collectZombieJob: --- 10, [526099]
[2026-01-09 14:45:37] 2026-01-09 19:44:39,023 | INFO     | zombie collector waiting for pid 526099
[2026-01-09 14:45:37] 2026-01-09 19:44:39,024 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 14:45:37] 2026-01-09 19:44:39,024 | INFO     | collected zombie processes
[2026-01-09 14:45:37] 2026-01-09 19:44:39,024 | INFO     | will attempt to kill all subprocesses of pid=526099
[2026-01-09 14:45:37] 2026-01-09 19:44:41,469 | INFO     | process IDs to be killed: [526099] (in reverse order)
[2026-01-09 14:45:37] 2026-01-09 19:44:42,801 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 14:45:37] 2026-01-09 19:44:42,801 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 14:45:37] 2026-01-09 19:44:42,883 | INFO     | did not find any defunct processes belonging to 526099
[2026-01-09 14:45:37] 2026-01-09 19:44:42,917 | INFO     | did not find any defunct processes belonging to 526099
[2026-01-09 14:45:37] 2026-01-09 19:44:42,917 | INFO     | ready for new job
[2026-01-09 14:45:37] 2026-01-09 19:44:42,917 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 14:45:37] 2026-01-09 19:44:42,919 | INFO     | ***************************************
[2026-01-09 14:45:37] 2026-01-09 19:44:42,920 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 14:45:37] 2026-01-09 19:44:42,920 | INFO     | ***************************************
[2026-01-09 14:45:37] 2026-01-09 19:44:42,920 | INFO     | 
[2026-01-09 14:45:37] 2026-01-09 19:44:42,925 | INFO     | architecture information:
[2026-01-09 14:45:37] 2026-01-09 19:44:42,925 | INFO     | executing command: cat /etc/os-release
[2026-01-09 14:45:37] 2026-01-09 19:44:42,986 | INFO     | cat /etc/os-release:
[2026-01-09 14:45:37] NAME="CentOS Linux"
[2026-01-09 14:45:37] VERSION="7 (Core)"
[2026-01-09 14:45:37] ID="centos"
[2026-01-09 14:45:37] ID_LIKE="rhel fedora"
[2026-01-09 14:45:37] VERSION_ID="7"
[2026-01-09 14:45:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 14:45:37] ANSI_COLOR="0;31"
[2026-01-09 14:45:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 14:45:37] HOME_URL="https://www.centos.org/"
[2026-01-09 14:45:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 14:45:37] 
[2026-01-09 14:45:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 14:45:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 14:45:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 14:45:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 14:45:37] 
[2026-01-09 14:45:37] 2026-01-09 19:44:42,986 | INFO     | ***************************************
[2026-01-09 14:45:37] 2026-01-09 19:44:43,489 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-09 14:45:37] 2026-01-09 19:44:43,629 | INFO     | sufficient remaining disk space (73230450688 B)
[2026-01-09 14:45:37] 2026-01-09 19:44:43,629 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 14:45:37] 2026-01-09 19:44:43,629 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 14:45:37] 2026-01-09 19:44:43,629 | INFO     | update_server=False
[2026-01-09 14:45:37] 2026-01-09 19:44:43,629 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 14:45:37] 2026-01-09 19:44:43,630 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 14:45:37] 2026-01-09 19:44:43,746 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 14:45:37] 2026-01-09 19:44:44,087 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 14:45:37] 2026-01-09 19:44:44,088 | INFO     | aborting loop
[2026-01-09 14:45:37] 2026-01-09 19:44:44,419 | INFO     | all data control threads have been joined
[2026-01-09 14:45:37] 2026-01-09 19:44:44,609 | INFO     | all job control threads have been joined
[2026-01-09 14:45:37] 2026-01-09 19:44:44,635 | INFO     | [job] queue monitor thread has finished
[2026-01-09 14:45:37] 2026-01-09 19:44:44,641 | INFO     | [job] retrieve thread has finished
[2026-01-09 14:45:37] 2026-01-09 19:44:44,647 | INFO     | [payload] failed_post thread has finished
[2026-01-09 14:45:37] 2026-01-09 19:44:44,759 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 14:45:37] 2026-01-09 19:44:44,883 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 14:45:37] 2026-01-09 19:44:44,926 | INFO     | all payload control threads have been joined
[2026-01-09 14:45:37] 2026-01-09 19:44:45,093 | INFO     | [job] job monitor thread has finished
[2026-01-09 14:45:37] 2026-01-09 19:44:45,239 | INFO     | [payload] validate_post thread has finished
[2026-01-09 14:45:37] 2026-01-09 19:44:45,433 | INFO     | [data] control thread has finished
[2026-01-09 14:45:37] 2026-01-09 19:44:45,508 | INFO     | [job] validate thread has finished
[2026-01-09 14:45:37] 2026-01-09 19:44:45,509 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 14:45:37] 2026-01-09 19:44:45,618 | INFO     | [job] control thread has finished
[2026-01-09 14:45:37] 2026-01-09 19:44:45,638 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 14:45:37] 2026-01-09 19:44:45,825 | INFO     | [data] copytool_in thread has finished
[2026-01-09 14:45:37] 2026-01-09 19:44:45,889 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 14:45:37] 2026-01-09 19:44:45,943 | INFO     | [payload] control thread has finished
[2026-01-09 14:45:37] 2026-01-09 19:44:46,934 | INFO     | [data] copytool_out thread has finished
[2026-01-09 14:45:37] 2026-01-09 19:44:47,782 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 14:45:37] 2026-01-09 19:45:13,748 | INFO     | PID=479219 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 14:45:37] 2026-01-09 19:45:13,748 | INFO     | .. there are 87 such processes running
[2026-01-09 14:45:37] 2026-01-09 19:45:13,749 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 14:45:37] 2026-01-09 19:45:13,749 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 14:45:37] 2026-01-09 19:45:13,749 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 14:45:37] 2026-01-09 19:45:27,821 | INFO     | [monitor] cgroup control has ended
[2026-01-09 14:45:37] 2026-01-09 19:45:29,311 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140200435947328)>', '<ExcThread(monitor, started 140200162334464)>']
[2026-01-09 14:45:37] 2026-01-09 19:45:29,878 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 14:45:37] 2026-01-09 19:45:29,878 | INFO     | [monitor] control thread has ended
[2026-01-09 14:45:37] 2026-01-09 19:45:34,337 | INFO     | all workflow threads have been joined
[2026-01-09 14:45:37] 2026-01-09 19:45:34,337 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 14:45:37] 2026-01-09 19:45:34,338 | INFO     | traces error code: 0
[2026-01-09 14:45:37] 2026-01-09 19:45:34,338 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 14:45:37] 2026-01-09 19:45:35,281 [wrapper] ==== pilot stdout END ====
[2026-01-09 14:45:37] 2026-01-09 19:45:35,299 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 14:45:37] 2026-01-09 19:45:35,342 [wrapper] pilotpid: 479219
[2026-01-09 14:45:37] 2026-01-09 19:45:35,379 [wrapper] Pilot exit status: 0
[2026-01-09 14:45:37] 2026-01-09 19:45:35,463 [wrapper] pandaids: 6963189166
[2026-01-09 14:45:37] 2026-01-09 19:45:36,359 [wrapper] cleanup supervisor_pilot 4059857 479222
[2026-01-09 14:45:37] 2026-01-09 19:45:36,384 [wrapper] Test setup, not cleaning
[2026-01-09 14:45:37] 2026-01-09 19:45:36,425 [wrapper] apfmon messages muted
[2026-01-09 14:45:37] 2026-01-09 19:45:36,458 [wrapper] ==== wrapper stdout END ====
[2026-01-09 14:45:37] 2026-01-09 19:45:36,539 [wrapper] ==== wrapper stderr END ====
[2026-01-09 14:45:37]  *** Error codes and diagnostics ***
[2026-01-09 14:45:37]     "exeErrorCode": 0,
[2026-01-09 14:45:37]     "exeErrorDiag": "",
[2026-01-09 14:45:37]     "pilotErrorCode": 0,
[2026-01-09 14:45:37]     "pilotErrorDiag": "",
[2026-01-09 14:45:37]  *** Listing of results directory ***
[2026-01-09 14:45:37] total 440452
[2026-01-09 14:45:37] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-09 14:45:37] -rwx------. 1 boincer umatlas     36322 Jan  8 23:25 runpilot2-wrapper.sh
[2026-01-09 14:45:37] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 23:30 queuedata.json
[2026-01-09 14:45:37] -rw-r--r--. 1 boincer umatlas       100 Jan  9 09:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 14:45:37] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 09:51 run_atlas
[2026-01-09 14:45:37] -rw-r--r--. 1 boincer umatlas       105 Jan  9 09:51 job.xml
[2026-01-09 14:45:37] -rw-r--r--. 2 boincer umatlas 225788280 Jan  9 09:51 EVNT.47898824._001460.pool.root.1
[2026-01-09 14:45:37] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 09:51 start_atlas.sh
[2026-01-09 14:45:37] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 09:51 shared
[2026-01-09 14:45:37] -rw-r--r--. 2 boincer umatlas    592400 Jan  9 09:51 input.tar.gz
[2026-01-09 14:45:37] -rw-r--r--. 1 boincer umatlas         0 Jan  9 09:51 boinc_lockfile
[2026-01-09 14:45:37] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 09:51 pandaJob.out
[2026-01-09 14:45:37] -rw-------. 1 boincer umatlas        57 Jan  9 09:51 setup.sh.local
[2026-01-09 14:45:37] -rw-------. 1 boincer umatlas    989377 Jan  9 09:52 agis_schedconf.cvmfs.json
[2026-01-09 14:45:37] drwx------. 5 boincer umatlas      4096 Jan  9 09:52 pilot3
[2026-01-09 14:45:37] -rw-r--r--. 1 boincer umatlas      6863 Jan  9 14:38 init_data.xml
[2026-01-09 14:45:37] -rw-------. 1 boincer umatlas 216274017 Jan  9 14:42 HITS.47898826._038048.pool.root.1
[2026-01-09 14:45:37] -rw-r--r--. 1 boincer umatlas       531 Jan  9 14:42 boinc_task_state.xml
[2026-01-09 14:45:37] -rw-------. 1 boincer umatlas      1047 Jan  9 14:43 memory_monitor_summary.json
[2026-01-09 14:45:37] -rw-------. 1 boincer umatlas   1516240 Jan  9 14:43 agis_ddmendpoints.agis.ALL.json
[2026-01-09 14:45:37] -rw-------. 1 boincer umatlas    495407 Jan  9 14:43 log.47898826._038048.job.log.tgz.1
[2026-01-09 14:45:37] -rw-------. 1 boincer umatlas      7830 Jan  9 14:44 heartbeat.json
[2026-01-09 14:45:37] -rw-------. 1 boincer umatlas        95 Jan  9 14:45 pilot_heartbeat.json
[2026-01-09 14:45:37] -rw-------. 1 boincer umatlas      4823 Jan  9 14:45 pilotlog.txt
[2026-01-09 14:45:37] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 14:45 boinc_mmap_file
[2026-01-09 14:45:37] -rw-r--r--. 1 boincer umatlas        28 Jan  9 14:45 wrapper_checkpoint.txt
[2026-01-09 14:45:37] -rw-------. 1 boincer umatlas   2024135 Jan  9 14:45 log.47898826._038048.job.log.1
[2026-01-09 14:45:37] -rw-------. 1 boincer umatlas       357 Jan  9 14:45 output.list
[2026-01-09 14:45:37] -rw-r--r--. 1 boincer umatlas       620 Jan  9 14:45 runtime_log
[2026-01-09 14:45:37] -rw-------. 1 boincer umatlas   2539520 Jan  9 14:45 result.tar.gz
[2026-01-09 14:45:37] -rw-------. 1 boincer umatlas       657 Jan  9 14:45 S5CNDmLFJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmPAhKDm56KUom.diag
[2026-01-09 14:45:37] -rw-r--r--. 1 boincer umatlas      9343 Jan  9 14:45 runtime_log.err
[2026-01-09 14:45:37] -rw-r--r--. 1 boincer umatlas     21416 Jan  9 14:45 stderr.txt
[2026-01-09 14:45:37] HITS file was successfully produced:
[2026-01-09 14:45:37] -rw-------. 1 boincer umatlas 216274017 Jan  9 14:42 shared/HITS.pool.root.1
[2026-01-09 14:45:37]  *** Contents of shared directory: ***
[2026-01-09 14:45:37] total 434792
[2026-01-09 14:45:37] -rw-r--r--. 2 boincer umatlas 225788280 Jan  9 09:51 ATLAS.root_0
[2026-01-09 14:45:37] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 09:51 start_atlas.sh
[2026-01-09 14:45:37] -rw-r--r--. 2 boincer umatlas    592400 Jan  9 09:51 input.tar.gz
[2026-01-09 14:45:37] -rw-------. 1 boincer umatlas 216274017 Jan  9 14:42 HITS.pool.root.1
[2026-01-09 14:45:37] -rw-------. 1 boincer umatlas   2539520 Jan  9 14:45 result.tar.gz
14:45:39 (459802): run_atlas exited; CPU time 58477.183256
14:45:39 (459802): called boinc_finish(0)

</stderr_txt>
]]>

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