Name jwjLDmZFJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm2NmKDmXb7AXn_0
Workunit 238430366
Created 9 Jan 2026, 4:36:07 UTC
Sent 9 Jan 2026, 12:03:41 UTC
Report deadline 17 Jan 2026, 12:03:41 UTC
Received 9 Jan 2026, 18:07:56 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 10856800
Run time 4 hours 49 min
CPU time 15 hours 48 min 24 sec
Validate state Valid
Credit 598.34
Device peak FLOPS 27.72 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 2.60 GB
Peak swap size 31.65 GB
Peak disk usage 653.99 MB

Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:04:00 (1149522): wrapper (7.7.26015): starting
07:04:00 (1149522): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 07:04:00] Arguments: --nthreads 8
[2026-01-09 07:04:00] Threads: 8
[2026-01-09 07:04:00] Checking for CVMFS
[2026-01-09 07:04:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 07:04:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 07:04:01] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 07:04:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 07:04:01] 2.13.3.0 11323 93386 333364 154942 2 572 21059435 32935936 15189 16776704 0 312606027 99.418 490273164 39934 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 07:04:01] CVMFS is ok
[2026-01-09 07:04:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 07:04:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 07:04:01] Further information can be found at the LHC@home message board.
[2026-01-09 07:04:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 07:04:01] Checking for apptainer binary...
[2026-01-09 07:04:01] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 07:04:01] Running /usr/bin/apptainer --version
[2026-01-09 07:04:01] apptainer version 1.4.5-2.el9
[2026-01-09 07:04:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 07:04:02] c6-4-5-3.aglt2.org
[2026-01-09 07:04:02] apptainer works
[2026-01-09 07:04:02] Set ATHENA_PROC_NUMBER=8
[2026-01-09 07:04:02] Set ATHENA_CORE_NUMBER=8
[2026-01-09 07:04:02] Starting ATLAS job with PandaID=6963193685
[2026-01-09 07:04:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 13:07:11]  *** The last 200 lines of the pilot log: ***
[2026-01-09 13:07:11] 2026-01-09 18:06:38,194 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2994.8047031250017
[2026-01-09 13:07:11] 2026-01-09 18:06:38,216 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6963193685/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 13:07:11] 2026-01-09 18:06:38,216 | INFO     | extracted standard info from prmon json
[2026-01-09 13:07:11] 2026-01-09 18:06:38,217 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 13:07:11] 2026-01-09 18:06:38,217 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 13:07:11] 2026-01-09 18:06:38,217 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 13:07:11] 2026-01-09 18:06:38,217 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 13:07:11] 2026-01-09 18:06:38,223 | INFO     | fitting pss+swap vs Time
[2026-01-09 13:07:11] 2026-01-09 18:06:38,224 | INFO     | sum of square deviations: 13989774906.974667
[2026-01-09 13:07:11] 2026-01-09 18:06:38,227 | INFO     | sum of deviations: 60140351030.25551
[2026-01-09 13:07:11] 2026-01-09 18:06:38,227 | INFO     | mean x: 1767971126.991573
[2026-01-09 13:07:11] 2026-01-09 18:06:38,227 | INFO     | mean y: 2491160.4185393257
[2026-01-09 13:07:11] 2026-01-09 18:06:38,227 | INFO     | intersect: -7597802975.523571
[2026-01-09 13:07:11] 2026-01-09 18:06:38,227 | INFO     | chi2: 2.6921472528216674
[2026-01-09 13:07:11] 2026-01-09 18:06:38,228 | INFO     | sum of square deviations: 13408589475.749249
[2026-01-09 13:07:11] 2026-01-09 18:06:38,231 | INFO     | sum of deviations: 83879180898.07124
[2026-01-09 13:07:11] 2026-01-09 18:06:38,231 | INFO     | mean x: 1767970974.4985754
[2026-01-09 13:07:11] 2026-01-09 18:06:38,231 | INFO     | mean y: 2497314.1424501427
[2026-01-09 13:07:11] 2026-01-09 18:06:38,231 | INFO     | intersect: -11057275785.832989
[2026-01-09 13:07:11] 2026-01-09 18:06:38,231 | INFO     | chi2: 1.8390800328274153
[2026-01-09 13:07:11] 2026-01-09 18:06:38,232 | INFO     | current chi2=1.8390800328274153 (change=31.687242185587866 %)
[2026-01-09 13:07:11] 2026-01-09 18:06:38,232 | INFO     | sum of square deviations: 12843729931.988493
[2026-01-09 13:07:11] 2026-01-09 18:06:38,235 | INFO     | sum of deviations: 82163730799.33531
[2026-01-09 13:07:11] 2026-01-09 18:06:38,235 | INFO     | mean x: 1767970822.0057805
[2026-01-09 13:07:11] 2026-01-09 18:06:38,235 | INFO     | mean y: 2496851.332369942
[2026-01-09 13:07:11] 2026-01-09 18:06:38,235 | INFO     | intersect: -11307541544.801405
[2026-01-09 13:07:11] 2026-01-09 18:06:38,235 | INFO     | chi2: 1.8394926204521067
[2026-01-09 13:07:11] 2026-01-09 18:06:38,236 | INFO     | current chi2=1.8394926204521067 (change=-0.02243445730075783 %)
[2026-01-09 13:07:11] 2026-01-09 18:06:38,236 | INFO     | right removable region: 345
[2026-01-09 13:07:11] 2026-01-09 18:06:38,236 | INFO     | sum of square deviations: 13408482725.749264
[2026-01-09 13:07:11] 2026-01-09 18:06:38,239 | INFO     | sum of deviations: -6109361054.777786
[2026-01-09 13:07:11] 2026-01-09 18:06:38,239 | INFO     | mean x: 1767971279.4985754
[2026-01-09 13:07:11] 2026-01-09 18:06:38,239 | INFO     | mean y: 2508459.4444444445
[2026-01-09 13:07:11] 2026-01-09 18:06:38,239 | INFO     | intersect: 808056342.9638813
[2026-01-09 13:07:11] 2026-01-09 18:06:38,240 | INFO     | chi2: 1.0143776256973562
[2026-01-09 13:07:11] 2026-01-09 18:06:38,240 | INFO     | current chi2=1.0143776256973562 (change=62.32087139237363 %)
[2026-01-09 13:07:11] 2026-01-09 18:06:38,240 | INFO     | sum of square deviations: 12843516431.988487
[2026-01-09 13:07:11] 2026-01-09 18:06:38,243 | INFO     | sum of deviations: -17807947574.63007
[2026-01-09 13:07:11] 2026-01-09 18:06:38,243 | INFO     | mean x: 1767971432.0057805
[2026-01-09 13:07:11] 2026-01-09 18:06:38,243 | INFO     | mean y: 2511610.3150289017
[2026-01-09 13:07:11] 2026-01-09 18:06:38,243 | INFO     | intersect: 2453860720.297684
[2026-01-09 13:07:11] 2026-01-09 18:06:38,244 | INFO     | chi2: 0.972299826343812
[2026-01-09 13:07:11] 2026-01-09 18:06:38,244 | INFO     | current chi2=0.972299826343812 (change=4.148139537740391 %)
[2026-01-09 13:07:11] 2026-01-09 18:06:38,244 | INFO     | left removable region: 20
[2026-01-09 13:07:11] 2026-01-09 18:06:38,244 | INFO     | sum of square deviations: 10643983458.972307
[2026-01-09 13:07:11] 2026-01-09 18:06:38,246 | INFO     | sum of deviations: 10816746532.867691
[2026-01-09 13:07:11] 2026-01-09 18:06:38,247 | INFO     | mean x: 1767971401.5292308
[2026-01-09 13:07:11] 2026-01-09 18:06:38,247 | INFO     | mean y: 2516471.7507692305
[2026-01-09 13:07:11] 2026-01-09 18:06:38,247 | INFO     | intersect: -1794150969.6647177
[2026-01-09 13:07:11] 2026-01-09 18:06:38,247 | INFO     | chi2: 0.0783930826820641
[2026-01-09 13:07:11] 2026-01-09 18:06:38,247 | INFO     | current memory leak: 1.02 B/s (using 325 data points, chi2=0.08)
[2026-01-09 13:07:11] 2026-01-09 18:06:38,248 | INFO     | could have reported an average CPU frequency of 2981 MHz (15 samples)
[2026-01-09 13:07:11] 2026-01-09 18:06:38,248 | INFO     | ..............................
[2026-01-09 13:07:11] 2026-01-09 18:06:38,249 | INFO     | . Timing measurements:
[2026-01-09 13:07:11] 2026-01-09 18:06:38,249 | INFO     | . get job = 0 s
[2026-01-09 13:07:11] 2026-01-09 18:06:38,249 | INFO     | . initial setup = 2 s
[2026-01-09 13:07:11] 2026-01-09 18:06:38,249 | INFO     | . payload setup = 9 s
[2026-01-09 13:07:11] 2026-01-09 18:06:38,249 | INFO     | . stage-in = 0 s
[2026-01-09 13:07:11] 2026-01-09 18:06:38,249 | INFO     | . payload execution = 21691 s
[2026-01-09 13:07:11] 2026-01-09 18:06:38,249 | INFO     | . stage-out = 2 s
[2026-01-09 13:07:11] 2026-01-09 18:06:38,249 | INFO     | . log creation = 0 s
[2026-01-09 13:07:11] 2026-01-09 18:06:38,249 | INFO     | ..............................
[2026-01-09 13:07:11] 2026-01-09 18:06:38,344 | INFO     | 
[2026-01-09 13:07:11] 2026-01-09 18:06:38,345 | INFO     | job summary report
[2026-01-09 13:07:11] 2026-01-09 18:06:38,345 | INFO     | --------------------------------------------------
[2026-01-09 13:07:11] 2026-01-09 18:06:38,345 | INFO     | PanDA job id: 6963193685
[2026-01-09 13:07:11] 2026-01-09 18:06:38,345 | INFO     | task id: 47898826
[2026-01-09 13:07:11] 2026-01-09 18:06:38,345 | INFO     | errors: (none)
[2026-01-09 13:07:11] 2026-01-09 18:06:38,345 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 13:07:11] 2026-01-09 18:06:38,345 | INFO     | pilot state: finished 
[2026-01-09 13:07:11] 2026-01-09 18:06:38,346 | INFO     | transexitcode: 0
[2026-01-09 13:07:11] 2026-01-09 18:06:38,346 | INFO     | exeerrorcode: 0
[2026-01-09 13:07:11] 2026-01-09 18:06:38,346 | INFO     | exeerrordiag: 
[2026-01-09 13:07:11] 2026-01-09 18:06:38,346 | INFO     | exitcode: 0
[2026-01-09 13:07:11] 2026-01-09 18:06:38,346 | INFO     | exitmsg: OK
[2026-01-09 13:07:11] 2026-01-09 18:06:38,346 | INFO     | cpuconsumptiontime: 55692 s
[2026-01-09 13:07:11] 2026-01-09 18:06:38,346 | INFO     | nevents: 400
[2026-01-09 13:07:11] 2026-01-09 18:06:38,346 | INFO     | neventsw: 0
[2026-01-09 13:07:11] 2026-01-09 18:06:38,346 | INFO     | pid: 1160495
[2026-01-09 13:07:11] 2026-01-09 18:06:38,346 | INFO     | pgrp: 1160495
[2026-01-09 13:07:11] 2026-01-09 18:06:38,346 | INFO     | corecount: 8
[2026-01-09 13:07:11] 2026-01-09 18:06:38,346 | INFO     | event service: False
[2026-01-09 13:07:11] 2026-01-09 18:06:38,346 | INFO     | sizes: {0: 2283744, 1: 2283999, 9: 2284261, 12: 2284289, 21704: 2318091, 21705: 2318090, 21707: 2327272, 21709: 2327328, 21716: 2327522}
[2026-01-09 13:07:11] 2026-01-09 18:06:38,346 | INFO     | --------------------------------------------------
[2026-01-09 13:07:11] 2026-01-09 18:06:38,347 | INFO     | 
[2026-01-09 13:07:11] 2026-01-09 18:06:38,347 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-09 13:07:11] 2026-01-09 18:06:38,384 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 13:07:11] 2026-01-09 18:06:38,384 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 13:07:11] 2026-01-09 18:06:38,384 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 13:07:11] 2026-01-09 18:06:38,384 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 13:07:11] 2026-01-09 18:06:38,385 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 13:07:11] 2026-01-09 18:06:38,385 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 13:07:11] 2026-01-09 18:06:38,385 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 13:07:11] 2026-01-09 18:06:38,385 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 13:07:11] 2026-01-09 18:06:38,385 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 13:07:11] 2026-01-09 18:06:38,385 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 13:07:11] 2026-01-09 18:06:38,385 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 13:07:11] 2026-01-09 18:06:38,385 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 13:07:11] 2026-01-09 18:06:38,385 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 13:07:11] 2026-01-09 18:06:38,385 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 13:07:11] 2026-01-09 18:06:38,385 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 13:07:11] 2026-01-09 18:06:38,385 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 13:07:11] 2026-01-09 18:06:38,385 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 13:07:11] 2026-01-09 18:06:38,385 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 13:07:11] 2026-01-09 18:06:38,385 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 13:07:11] 2026-01-09 18:06:38,386 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 13:07:11] 2026-01-09 18:06:38,386 | INFO     | job 6963193685 has completed (purged errors)
[2026-01-09 13:07:11] 2026-01-09 18:06:38,386 | INFO     | overall cleanup function is called
[2026-01-09 13:07:11] 2026-01-09 18:06:39,395 | INFO     | --- collectZombieJob: --- 10, [1160495]
[2026-01-09 13:07:11] 2026-01-09 18:06:39,395 | INFO     | zombie collector waiting for pid 1160495
[2026-01-09 13:07:11] 2026-01-09 18:06:39,395 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 13:07:11] 2026-01-09 18:06:39,395 | INFO     | collected zombie processes
[2026-01-09 13:07:11] 2026-01-09 18:06:39,395 | INFO     | will attempt to kill all subprocesses of pid=1160495
[2026-01-09 13:07:11] 2026-01-09 18:06:39,748 | INFO     | process IDs to be killed: [1160495] (in reverse order)
[2026-01-09 13:07:11] 2026-01-09 18:06:39,864 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 13:07:11] 2026-01-09 18:06:39,865 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 13:07:11] 2026-01-09 18:06:39,880 | INFO     | did not find any defunct processes belonging to 1160495
[2026-01-09 13:07:11] 2026-01-09 18:06:39,895 | INFO     | did not find any defunct processes belonging to 1160495
[2026-01-09 13:07:11] 2026-01-09 18:06:39,895 | INFO     | ready for new job
[2026-01-09 13:07:11] 2026-01-09 18:06:39,895 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 13:07:11] 2026-01-09 18:06:39,900 | INFO     | ***************************************
[2026-01-09 13:07:11] 2026-01-09 18:06:39,900 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 13:07:11] 2026-01-09 18:06:39,900 | INFO     | ***************************************
[2026-01-09 13:07:11] 2026-01-09 18:06:39,900 | INFO     | 
[2026-01-09 13:07:11] 2026-01-09 18:06:39,912 | INFO     | architecture information:
[2026-01-09 13:07:11] 2026-01-09 18:06:39,913 | INFO     | executing command: cat /etc/os-release
[2026-01-09 13:07:11] 2026-01-09 18:06:39,930 | INFO     | cat /etc/os-release:
[2026-01-09 13:07:11] NAME="CentOS Linux"
[2026-01-09 13:07:11] VERSION="7 (Core)"
[2026-01-09 13:07:11] ID="centos"
[2026-01-09 13:07:11] ID_LIKE="rhel fedora"
[2026-01-09 13:07:11] VERSION_ID="7"
[2026-01-09 13:07:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 13:07:11] ANSI_COLOR="0;31"
[2026-01-09 13:07:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 13:07:11] HOME_URL="https://www.centos.org/"
[2026-01-09 13:07:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 13:07:11] 
[2026-01-09 13:07:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 13:07:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 13:07:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 13:07:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 13:07:11] 
[2026-01-09 13:07:11] 2026-01-09 18:06:39,930 | INFO     | ***************************************
[2026-01-09 13:07:11] 2026-01-09 18:06:40,433 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-09 13:07:11] 2026-01-09 18:06:40,455 | INFO     | sufficient remaining disk space (75370594304 B)
[2026-01-09 13:07:11] 2026-01-09 18:06:40,455 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 13:07:11] 2026-01-09 18:06:40,456 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 13:07:11] 2026-01-09 18:06:40,456 | INFO     | update_server=False
[2026-01-09 13:07:11] 2026-01-09 18:06:40,456 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 13:07:11] 2026-01-09 18:06:40,459 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 13:07:11] 2026-01-09 18:06:40,595 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 13:07:11] 2026-01-09 18:06:40,595 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 13:07:11] 2026-01-09 18:06:40,595 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 13:07:11] 2026-01-09 18:06:40,595 | INFO     | will abort loop
[2026-01-09 13:07:11] 2026-01-09 18:06:40,718 | INFO     | all job control threads have been joined
[2026-01-09 13:07:11] 2026-01-09 18:06:41,157 | INFO     | all data control threads have been joined
[2026-01-09 13:07:11] 2026-01-09 18:06:41,462 | INFO     | [job] retrieve thread has finished
[2026-01-09 13:07:11] 2026-01-09 18:06:41,601 | INFO     | [job] job monitor thread has finished
[2026-01-09 13:07:11] 2026-01-09 18:06:41,668 | INFO     | [data] copytool_in thread has finished
[2026-01-09 13:07:11] 2026-01-09 18:06:41,710 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 13:07:11] 2026-01-09 18:06:41,724 | INFO     | [job] control thread has finished
[2026-01-09 13:07:11] 2026-01-09 18:06:41,823 | INFO     | all payload control threads have been joined
[2026-01-09 13:07:11] 2026-01-09 18:06:42,217 | INFO     | [data] control thread has finished
[2026-01-09 13:07:11] 2026-01-09 18:06:42,314 | INFO     | [payload] validate_post thread has finished
[2026-01-09 13:07:11] 2026-01-09 18:06:42,467 | INFO     | [data] copytool_out thread has finished
[2026-01-09 13:07:11] 2026-01-09 18:06:42,508 | INFO     | [payload] failed_post thread has finished
[2026-01-09 13:07:11] 2026-01-09 18:06:42,599 | INFO     | [job] validate thread has finished
[2026-01-09 13:07:11] 2026-01-09 18:06:42,707 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 13:07:11] 2026-01-09 18:06:42,788 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 13:07:11] 2026-01-09 18:06:42,839 | INFO     | [payload] control thread has finished
[2026-01-09 13:07:11] 2026-01-09 18:06:42,949 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 13:07:11] 2026-01-09 18:06:43,365 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 13:07:11] 2026-01-09 18:06:44,371 | INFO     | [job] queue monitor thread has finished
[2026-01-09 13:07:11] 2026-01-09 18:06:45,718 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 13:07:11] 2026-01-09 18:06:51,275 | INFO     | job.realtimelogging is not enabled
[2026-01-09 13:07:11] 2026-01-09 18:06:52,281 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 13:07:11] 2026-01-09 18:07:01,739 | INFO     | [monitor] cgroup control has ended
[2026-01-09 13:07:11] 2026-01-09 18:07:02,598 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139954282489664)>', '<ExcThread(monitor, started 139953614857984)>']
[2026-01-09 13:07:11] 2026-01-09 18:07:07,624 | INFO     | all workflow threads have been joined
[2026-01-09 13:07:11] 2026-01-09 18:07:07,624 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 13:07:11] 2026-01-09 18:07:07,625 | INFO     | traces error code: 0
[2026-01-09 13:07:11] 2026-01-09 18:07:07,625 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 13:07:11] 2026-01-09 18:07:10,532 | INFO     | PID=1153967 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 13:07:11] 2026-01-09 18:07:10,532 | INFO     | .. there are 25 such processes running
[2026-01-09 13:07:11] 2026-01-09 18:07:10,533 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 13:07:11] 2026-01-09 18:07:10,533 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 13:07:11] 2026-01-09 18:07:10,533 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 13:07:11] 2026-01-09 18:07:10,533 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 13:07:11] 2026-01-09 18:07:10,533 | INFO     | [monitor] control thread has ended
[2026-01-09 13:07:11] 2026-01-09 18:07:10,889 [wrapper] ==== pilot stdout END ====
[2026-01-09 13:07:11] 2026-01-09 18:07:10,892 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 13:07:11] 2026-01-09 18:07:10,894 [wrapper] pilotpid: 1153967
[2026-01-09 13:07:11] 2026-01-09 18:07:10,896 [wrapper] Pilot exit status: 0
[2026-01-09 13:07:11] 2026-01-09 18:07:10,919 [wrapper] pandaids: 6963193685
[2026-01-09 13:07:11] 2026-01-09 18:07:10,977 [wrapper] cleanup supervisor_pilot 2595212 1153968
[2026-01-09 13:07:11] 2026-01-09 18:07:10,981 [wrapper] Test setup, not cleaning
[2026-01-09 13:07:11] 2026-01-09 18:07:10,985 [wrapper] apfmon messages muted
[2026-01-09 13:07:11] 2026-01-09 18:07:10,987 [wrapper] ==== wrapper stdout END ====
[2026-01-09 13:07:11] 2026-01-09 18:07:10,989 [wrapper] ==== wrapper stderr END ====
[2026-01-09 13:07:11]  *** Error codes and diagnostics ***
[2026-01-09 13:07:11]     "exeErrorCode": 0,
[2026-01-09 13:07:11]     "exeErrorDiag": "",
[2026-01-09 13:07:11]     "pilotErrorCode": 0,
[2026-01-09 13:07:11]     "pilotErrorDiag": "",
[2026-01-09 13:07:11]  *** Listing of results directory ***
[2026-01-09 13:07:11] total 445488
[2026-01-09 13:07:11] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-09 13:07:11] -rwx------. 1 boincer umatlas     36322 Jan  8 23:25 runpilot2-wrapper.sh
[2026-01-09 13:07:11] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 23:30 queuedata.json
[2026-01-09 13:07:11] -rw-r--r--. 1 boincer umatlas       100 Jan  9 07:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 13:07:11] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 07:03 run_atlas
[2026-01-09 13:07:11] -rw-r--r--. 1 boincer umatlas       105 Jan  9 07:03 job.xml
[2026-01-09 13:07:11] -rw-r--r--. 2 boincer umatlas 226702420 Jan  9 07:04 EVNT.47898824._001505.pool.root.1
[2026-01-09 13:07:11] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 07:04 start_atlas.sh
[2026-01-09 13:07:11] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 07:04 shared
[2026-01-09 13:07:11] -rw-r--r--. 2 boincer umatlas    592396 Jan  9 07:04 input.tar.gz
[2026-01-09 13:07:11] -rw-r--r--. 1 boincer umatlas         0 Jan  9 07:04 boinc_lockfile
[2026-01-09 13:07:11] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 07:04 pandaJob.out
[2026-01-09 13:07:11] -rw-------. 1 boincer umatlas        57 Jan  9 07:04 setup.sh.local
[2026-01-09 13:07:11] -rw-------. 1 boincer umatlas    989377 Jan  9 07:04 agis_schedconf.cvmfs.json
[2026-01-09 13:07:11] drwx------. 5 boincer umatlas      4096 Jan  9 07:04 pilot3
[2026-01-09 13:07:11] -rw-r--r--. 1 boincer umatlas      6876 Jan  9 13:00 init_data.xml
[2026-01-09 13:07:11] -rw-------. 1 boincer umatlas 219253741 Jan  9 13:05 HITS.47898826._039158.pool.root.1
[2026-01-09 13:07:11] -rw-r--r--. 1 boincer umatlas       531 Jan  9 13:05 boinc_task_state.xml
[2026-01-09 13:07:11] -rw-------. 1 boincer umatlas      1043 Jan  9 13:06 memory_monitor_summary.json
[2026-01-09 13:07:11] -rw-------. 1 boincer umatlas   1516240 Jan  9 13:06 agis_ddmendpoints.agis.ALL.json
[2026-01-09 13:07:11] -rw-------. 1 boincer umatlas    534479 Jan  9 13:06 log.47898826._039158.job.log.tgz.1
[2026-01-09 13:07:11] -rw-------. 1 boincer umatlas      7825 Jan  9 13:06 heartbeat.json
[2026-01-09 13:07:11] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 13:07 boinc_mmap_file
[2026-01-09 13:07:11] -rw-r--r--. 1 boincer umatlas        28 Jan  9 13:07 wrapper_checkpoint.txt
[2026-01-09 13:07:11] -rw-------. 1 boincer umatlas       823 Jan  9 13:07 pilotlog.txt
[2026-01-09 13:07:11] -rw-------. 1 boincer umatlas        95 Jan  9 13:07 pilot_heartbeat.json
[2026-01-09 13:07:11] -rw-------. 1 boincer umatlas   2619817 Jan  9 13:07 log.47898826._039158.job.log.1
[2026-01-09 13:07:11] -rw-------. 1 boincer umatlas       357 Jan  9 13:07 output.list
[2026-01-09 13:07:11] -rw-r--r--. 1 boincer umatlas       620 Jan  9 13:07 runtime_log
[2026-01-09 13:07:11] -rw-------. 1 boincer umatlas   3174400 Jan  9 13:07 result.tar.gz
[2026-01-09 13:07:11] -rw-r--r--. 1 boincer umatlas      9343 Jan  9 13:07 runtime_log.err
[2026-01-09 13:07:11] -rw-------. 1 boincer umatlas       656 Jan  9 13:07 jwjLDmZFJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm2NmKDmXb7AXn.diag
[2026-01-09 13:07:11] -rw-r--r--. 1 boincer umatlas     21196 Jan  9 13:07 stderr.txt
[2026-01-09 13:07:11] HITS file was successfully produced:
[2026-01-09 13:07:11] -rw-------. 1 boincer umatlas 219253741 Jan  9 13:05 shared/HITS.pool.root.1
[2026-01-09 13:07:11]  *** Contents of shared directory: ***
[2026-01-09 13:07:11] total 439212
[2026-01-09 13:07:11] -rw-r--r--. 2 boincer umatlas 226702420 Jan  9 07:04 ATLAS.root_0
[2026-01-09 13:07:11] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 07:04 start_atlas.sh
[2026-01-09 13:07:11] -rw-r--r--. 2 boincer umatlas    592396 Jan  9 07:04 input.tar.gz
[2026-01-09 13:07:11] -rw-------. 1 boincer umatlas 219253741 Jan  9 13:05 HITS.pool.root.1
[2026-01-09 13:07:11] -rw-------. 1 boincer umatlas   3174400 Jan  9 13:07 result.tar.gz
13:07:12 (1149522): run_atlas exited; CPU time 56344.234212
13:07:12 (1149522): called boinc_finish(0)

</stderr_txt>
]]>


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