Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:29:57 (361546): wrapper (7.7.26015): starting
04:29:57 (361546): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 04:29:57] Arguments: --nthreads 12
[2026-01-09 04:29:57] Threads: 12
[2026-01-09 04:29:57] Checking for CVMFS
[2026-01-09 04:29:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 04:29:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 04:29:57] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 04:29:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 04:29:57] 2.11.5.0 1525032 56558 155296 154942 0 853 39797709 45568001 15813 130560 0 425454334 99.784 284212025 21285 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2026-01-09 04:29:57] CVMFS is ok
[2026-01-09 04:29:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 04:29:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 04:29:57] Further information can be found at the LHC@home message board.
[2026-01-09 04:29:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 04:29:57] Checking for apptainer binary...
[2026-01-09 04:29:57] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 04:29:57] Running /usr/bin/apptainer --version
[2026-01-09 04:29:57] apptainer version 1.4.1-1.el9
[2026-01-09 04:29:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 04:29:58] wns0053.triumf.lcg
[2026-01-09 04:29:58] apptainer works
[2026-01-09 04:29:58] Set ATHENA_PROC_NUMBER=12
[2026-01-09 04:29:58] Set ATHENA_CORE_NUMBER=12
[2026-01-09 04:29:58] Starting ATLAS job with PandaID=6963188975
[2026-01-09 04:29:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 04:33:17]  *** The last 200 lines of the pilot log: ***
[2026-01-09 04:33:17] 2026-01-09 12:32:45,292 | WARNING  | found no stored workdir sizes
[2026-01-09 04:33:17] 2026-01-09 12:32:45,292 | INFO     | will not add max space = 0 B to job metrics
[2026-01-09 04:33:17] 2026-01-09 12:32:45,293 | WARNING  | wrong length of table data, x=[1767961831.0], y=[1195.0] (must be same and length>=4)
[2026-01-09 04:33:17] 2026-01-09 12:32:45,293 | INFO     | could have reported an average CPU frequency of 2740 MHz (4 samples)
[2026-01-09 04:33:17] 2026-01-09 12:32:45,293 | INFO     | ..............................
[2026-01-09 04:33:17] 2026-01-09 12:32:45,293 | INFO     | . Timing measurements:
[2026-01-09 04:33:17] 2026-01-09 12:32:45,293 | INFO     | . get job = 0 s
[2026-01-09 04:33:17] 2026-01-09 12:32:45,293 | INFO     | . initial setup = 2 s
[2026-01-09 04:33:17] 2026-01-09 12:32:45,293 | INFO     | . payload setup = 4 s
[2026-01-09 04:33:17] 2026-01-09 12:32:45,293 | INFO     | . stage-in = 0 s
[2026-01-09 04:33:17] 2026-01-09 12:32:45,293 | INFO     | . payload execution = 15 s
[2026-01-09 04:33:17] 2026-01-09 12:32:45,293 | INFO     | . stage-out = 0 s
[2026-01-09 04:33:17] 2026-01-09 12:32:45,293 | INFO     | . log creation = 0 s
[2026-01-09 04:33:17] 2026-01-09 12:32:45,294 | INFO     | ..............................
[2026-01-09 04:33:17] 2026-01-09 12:32:45,294 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-09 04:33:17] 2026-01-09 12:32:45,294 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963188975/pilotlog.txt
[2026-01-09 04:33:17] 2026-01-09 12:32:45,304 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-01-09 04:33:17] - Log from pilotlog.txt -
[2026-01-09 04:33:17] 2026-01-09 12:32:45,292 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 04:33:17] 2026-01-09 12:32:45,292 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 04:33:17] 2026-01-09 12:32:45,292 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 04:33:17] 2026-01-09 12:32:45,292 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 04:33:17] 2026-01-09 12:32:45,292 | WARNING  | found no stored workdir sizes
[2026-01-09 04:33:17] 2026-01-09 12:32:45,292 | INFO     | will not add max space = 0 B to job metrics
[2026-01-09 04:33:17] 2026-01-09 12:32:45,293 | WARNING  | wrong length of table data, x=[1767961831.0], y=[1195.0] (must be same and length>=4)
[2026-01-09 04:33:17] 2026-01-09 12:32:45,293 | INFO     | could have reported an average CPU frequency of 2740 MHz (4 samples)
[2026-01-09 04:33:17] 2026-01-09 12:32:45,293 | INFO     | ..............................
[2026-01-09 04:33:17] 2026-01-09 12:32:45,293 | INFO     | . Timing measurements:
[2026-01-09 04:33:17] 2026-01-09 12:32:45,293 | INFO     | . get job = 0 s
[2026-01-09 04:33:17] 2026-01-09 12:32:45,293 | INFO     | . initial setup = 2 s
[2026-01-09 04:33:17] 2026-01-09 12:32:45,293 | INFO     | . payload setup = 4 s
[2026-01-09 04:33:17] 2026-01-09 12:32:45,293 | INFO     | . stage-in = 0 s
[2026-01-09 04:33:17] 2026-01-09 12:32:45,293 | INFO     | . payload execution = 15 s
[2026-01-09 04:33:17] 2026-01-09 12:32:45,293 | INFO     | . stage-out = 0 s
[2026-01-09 04:33:17] 2026-01-09 12:32:45,293 | INFO     | . log creation = 0 s
[2026-01-09 04:33:17] 2026-01-09 12:32:45,294 | INFO     | ..............................
[2026-01-09 04:33:17] 2026-01-09 12:32:45,294 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-09 04:33:17] 2026-01-09 12:32:45,294 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963188975/pilotlog.txt
[2026-01-09 04:33:17] 2026-01-09 12:32:45,304 | WARNING  | 
[2026-01-09 04:33:17] [begin log extracts]
[2026-01-09 04:33:17] - Log from pilotlog.txt -
[2026-01-09 04:33:17] 2026-01-09 12:32:45,292 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 04:33:17] 2026-01-09 12:32:45,292 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 04:33:17] 2026-01-09 12:32:45,292 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 04:33:17] 2026-01-09 12:32:45,292 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 04:33:17] 2026-01-09 12:32:45,292 | WARNING  | found no stored workdir sizes
[2026-01-09 04:33:17] 2026-01-09 12:32:45,292 | INFO     | will not add max space = 0 B to job metrics
[2026-01-09 04:33:17] 2026-01-09 12:32:45,293 | WARNING  | wrong length of table data, x=[1767961831.0], y=[1195.0] (must be same and length>=4)
[2026-01-09 04:33:17] 2026-01-09 12:32:45,293 | INFO     | could have reported an average CPU frequency of 2740 MHz (4 samples)
[2026-01-09 04:33:17] 2026-01-09 12:32:45,293 | INFO     | ..............................
[2026-01-09 04:33:17] 2026-01-09 12:32:45,293 | INFO     | . Timing measurements:
[2026-01-09 04:33:17] 2026-01-09 12:32:45,293 | INFO     | . get job = 0 s
[2026-01-09 04:33:17] 2026-01-09 12:32:45,293 | INFO     | . initial setup = 2 s
[2026-01-09 04:33:17] 2026-01-09 12:32:45,293 | INFO     | . payload setup = 4 s
[2026-01-09 04:33:17] 2026-01-09 12:32:45,293 | INFO     | . stage-in = 0 s
[2026-01-09 04:33:17] 2026-01-09 12:32:45,293 | INFO     | . payload execution = 15 s
[2026-01-09 04:33:17] 2026-01-09 12:32:45,293 | INFO     | . stage-out = 0 s
[2026-01-09 04:33:17] 2026-01-09 12:32:45,293 | INFO     | . log creation = 0 s
[2026-01-09 04:33:17] 2026-01-09 12:32:45,294 | INFO     | ..............................
[2026-01-09 04:33:17] 2026-01-09 12:32:45,294 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-09 04:33:17] 2026-01-09 12:32:45,294 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963188975/pilotlog.txt
[2026-01-09 04:33:17] [end log extracts]
[2026-01-09 04:33:17] 2026-01-09 12:32:45,305 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-01-09 04:33:17] 2026-01-09 12:32:45,305 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-01-09 04:33:17] 2026-01-09 12:32:45,360 | INFO     | 
[2026-01-09 04:33:17] 2026-01-09 12:32:45,361 | INFO     | job summary report
[2026-01-09 04:33:17] 2026-01-09 12:32:45,361 | INFO     | --------------------------------------------------
[2026-01-09 04:33:17] 2026-01-09 12:32:45,361 | INFO     | PanDA job id: 6963188975
[2026-01-09 04:33:17] 2026-01-09 12:32:45,361 | INFO     | task id: 47898826
[2026-01-09 04:33:17] 2026-01-09 12:32:45,361 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-01-09 04:30:37,582 CRITICAL Transform executor raised TransformValidationExceptio
[2026-01-09 04:33:17] 2026-01-09 12:32:45,361 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 04:33:17] 2026-01-09 12:32:45,361 | INFO     | pilot state: failed 
[2026-01-09 04:33:17] 2026-01-09 12:32:45,361 | INFO     | transexitcode: 65
[2026-01-09 04:33:17] 2026-01-09 12:32:45,361 | INFO     | exeerrorcode: 65
[2026-01-09 04:33:17] 2026-01-09 12:32:45,361 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-01-09 04:33:17] 2026-01-09 12:32:45,361 | INFO     | exitcode: 65
[2026-01-09 04:33:17] 2026-01-09 12:32:45,361 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-01-09 04:33:17] 2026-01-09 12:32:45,361 | INFO     | cpuconsumptiontime: 17 s
[2026-01-09 04:33:17] 2026-01-09 12:32:45,361 | INFO     | nevents: 0
[2026-01-09 04:33:17] 2026-01-09 12:32:45,361 | INFO     | neventsw: 0
[2026-01-09 04:33:17] 2026-01-09 12:32:45,361 | INFO     | pid: 374115
[2026-01-09 04:33:17] 2026-01-09 12:32:45,361 | INFO     | pgrp: 374115
[2026-01-09 04:33:17] 2026-01-09 12:32:45,362 | INFO     | corecount: 12
[2026-01-09 04:33:17] 2026-01-09 12:32:45,362 | INFO     | event service: False
[2026-01-09 04:33:17] 2026-01-09 12:32:45,362 | INFO     | sizes: {0: 2283797, 1: 2283996, 4: 2284258, 11: 2284286, 23: 2307422, 24: 2311870, 143: 2312008}
[2026-01-09 04:33:17] 2026-01-09 12:32:45,362 | INFO     | --------------------------------------------------
[2026-01-09 04:33:17] 2026-01-09 12:32:45,362 | INFO     | 
[2026-01-09 04:33:17] 2026-01-09 12:32:45,362 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-01-09 04:33:17] 2026-01-09 12:32:45,376 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 04:33:17] 2026-01-09 12:32:45,377 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 04:33:17] 2026-01-09 12:32:45,377 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 04:33:17] 2026-01-09 12:32:45,377 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 04:33:17] 2026-01-09 12:32:45,377 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 04:33:17] 2026-01-09 12:32:45,377 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 04:33:17] 2026-01-09 12:32:45,377 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 04:33:17] 2026-01-09 12:32:45,377 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 04:33:17] 2026-01-09 12:32:45,377 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 04:33:17] 2026-01-09 12:32:45,377 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 04:33:17] 2026-01-09 12:32:45,377 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 04:33:17] 2026-01-09 12:32:45,377 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 04:33:17] 2026-01-09 12:32:45,377 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 04:33:17] 2026-01-09 12:32:45,377 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 04:33:17] 2026-01-09 12:32:45,377 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 04:33:17] 2026-01-09 12:32:45,378 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 04:33:17] 2026-01-09 12:32:45,378 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 04:33:17] 2026-01-09 12:32:45,378 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 04:33:17] 2026-01-09 12:32:45,378 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 04:33:17] 2026-01-09 12:32:45,378 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 04:33:17] 2026-01-09 12:32:45,378 | INFO     | job 6963188975 has completed (purged errors)
[2026-01-09 04:33:17] 2026-01-09 12:32:45,378 | INFO     | overall cleanup function is called
[2026-01-09 04:33:17] 2026-01-09 12:32:46,385 | INFO     | --- collectZombieJob: --- 10, [374115]
[2026-01-09 04:33:17] 2026-01-09 12:32:46,385 | INFO     | zombie collector waiting for pid 374115
[2026-01-09 04:33:17] 2026-01-09 12:32:46,385 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 04:33:17] 2026-01-09 12:32:46,385 | INFO     | collected zombie processes
[2026-01-09 04:33:17] 2026-01-09 12:32:46,385 | INFO     | will attempt to kill all subprocesses of pid=374115
[2026-01-09 04:33:17] 2026-01-09 12:32:46,584 | INFO     | process IDs to be killed: [374115] (in reverse order)
[2026-01-09 04:33:17] 2026-01-09 12:32:46,655 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 04:33:17] 2026-01-09 12:32:46,656 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 04:33:17] 2026-01-09 12:32:46,664 | INFO     | did not find any defunct processes belonging to 374115
[2026-01-09 04:33:17] 2026-01-09 12:32:46,672 | INFO     | did not find any defunct processes belonging to 374115
[2026-01-09 04:33:17] 2026-01-09 12:32:46,672 | INFO     | ready for new job
[2026-01-09 04:33:17] 2026-01-09 12:32:46,672 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 04:33:17] 2026-01-09 12:32:46,674 | INFO     | ***************************************
[2026-01-09 04:33:17] 2026-01-09 12:32:46,674 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 04:33:17] 2026-01-09 12:32:46,674 | INFO     | ***************************************
[2026-01-09 04:33:17] 2026-01-09 12:32:46,674 | INFO     | 
[2026-01-09 04:33:17] 2026-01-09 12:32:46,676 | INFO     | architecture information:
[2026-01-09 04:33:17] 2026-01-09 12:32:46,676 | INFO     | executing command: cat /etc/os-release
[2026-01-09 04:33:17] 2026-01-09 12:32:46,688 | INFO     | cat /etc/os-release:
[2026-01-09 04:33:17] NAME="CentOS Linux"
[2026-01-09 04:33:17] VERSION="7 (Core)"
[2026-01-09 04:33:17] ID="centos"
[2026-01-09 04:33:17] ID_LIKE="rhel fedora"
[2026-01-09 04:33:17] VERSION_ID="7"
[2026-01-09 04:33:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 04:33:17] ANSI_COLOR="0;31"
[2026-01-09 04:33:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 04:33:17] HOME_URL="https://www.centos.org/"
[2026-01-09 04:33:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 04:33:17] 
[2026-01-09 04:33:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 04:33:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 04:33:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 04:33:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 04:33:17] 
[2026-01-09 04:33:17] 2026-01-09 12:32:46,688 | INFO     | ***************************************
[2026-01-09 04:33:17] 2026-01-09 12:32:47,190 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-01-09 04:33:17] 2026-01-09 12:32:47,204 | INFO     | sufficient remaining disk space (1713009328128 B)
[2026-01-09 04:33:17] 2026-01-09 12:32:47,204 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 04:33:17] 2026-01-09 12:32:47,204 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 04:33:17] 2026-01-09 12:32:47,204 | INFO     | update_server=False
[2026-01-09 04:33:17] 2026-01-09 12:32:47,204 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 04:33:17] 2026-01-09 12:32:47,205 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 04:33:17] 2026-01-09 12:32:47,205 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 04:33:17] 2026-01-09 12:32:47,585 | INFO     | all job control threads have been joined
[2026-01-09 04:33:17] 2026-01-09 12:32:47,799 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 04:33:17] 2026-01-09 12:32:47,800 | INFO     | aborting loop
[2026-01-09 04:33:17] 2026-01-09 12:32:48,145 | INFO     | all payload control threads have been joined
[2026-01-09 04:33:17] 2026-01-09 12:32:48,189 | INFO     | all data control threads have been joined
[2026-01-09 04:33:17] 2026-01-09 12:32:48,209 | INFO     | [job] retrieve thread has finished
[2026-01-09 04:33:17] 2026-01-09 12:32:48,210 | INFO     | [job] queue monitor thread has finished
[2026-01-09 04:33:17] 2026-01-09 12:32:48,448 | INFO     | [data] copytool_in thread has finished
[2026-01-09 04:33:17] 2026-01-09 12:32:48,590 | INFO     | [job] control thread has finished
[2026-01-09 04:33:17] 2026-01-09 12:32:48,805 | INFO     | [job] job monitor thread has finished
[2026-01-09 04:33:17] 2026-01-09 12:32:49,029 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 04:33:17] 2026-01-09 12:32:49,150 | INFO     | [payload] control thread has finished
[2026-01-09 04:33:17] 2026-01-09 12:32:49,172 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 04:33:17] 2026-01-09 12:32:49,194 | INFO     | [data] control thread has finished
[2026-01-09 04:33:17] 2026-01-09 12:32:49,202 | INFO     | [job] validate thread has finished
[2026-01-09 04:33:17] 2026-01-09 12:32:49,210 | INFO     | [data] copytool_out thread has finished
[2026-01-09 04:33:17] 2026-01-09 12:32:49,304 | INFO     | [payload] failed_post thread has finished
[2026-01-09 04:33:17] 2026-01-09 12:32:49,354 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 04:33:17] 2026-01-09 12:32:49,422 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 04:33:17] 2026-01-09 12:32:49,491 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 04:33:17] 2026-01-09 12:32:49,668 | INFO     | [payload] validate_post thread has finished
[2026-01-09 04:33:17] 2026-01-09 12:32:53,179 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 04:33:17] 2026-01-09 12:33:06,987 | INFO     | [monitor] cgroup control has ended
[2026-01-09 04:33:17] 2026-01-09 12:33:08,851 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140295391749952)>', '<ExcThread(monitor, started 140294494349056)>']
[2026-01-09 04:33:17] 2026-01-09 12:33:13,876 | INFO     | all workflow threads have been joined
[2026-01-09 04:33:17] 2026-01-09 12:33:13,876 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 04:33:17] 2026-01-09 12:33:13,876 | INFO     | traces error code: 0
[2026-01-09 04:33:17] 2026-01-09 12:33:13,877 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 04:33:17] 2026-01-09 12:33:17,093 | INFO     | PID=365260 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 04:33:17] 2026-01-09 12:33:17,093 | INFO     | .. there are 29 such processes running
[2026-01-09 04:33:17] 2026-01-09 12:33:17,094 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 04:33:17] 2026-01-09 12:33:17,094 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 04:33:17] 2026-01-09 12:33:17,094 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 04:33:17] 2026-01-09 12:33:17,094 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 04:33:17] 2026-01-09 12:33:17,094 | CRITICAL | thread 'MainThread' is not alive
[2026-01-09 04:33:17] 2026-01-09 12:33:17,094 | INFO     | [monitor] control thread has ended
[2026-01-09 04:33:17] 2026-01-09 12:33:17,218 [wrapper] ==== pilot stdout END ====
[2026-01-09 04:33:17] 2026-01-09 12:33:17,220 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 04:33:17] 2026-01-09 12:33:17,222 [wrapper] pilotpid: 365260
[2026-01-09 04:33:17] 2026-01-09 12:33:17,224 [wrapper] Pilot exit status: 0
[2026-01-09 04:33:17] 2026-01-09 12:33:17,230 [wrapper] pandaids: 6963188975
[2026-01-09 04:33:17] 2026-01-09 12:33:17,274 [wrapper] cleanup supervisor_pilot  365266 365261
[2026-01-09 04:33:17] 2026-01-09 12:33:17,276 [wrapper] Test setup, not cleaning
[2026-01-09 04:33:17] 2026-01-09 12:33:17,278 [wrapper] apfmon messages muted
[2026-01-09 04:33:17] 2026-01-09 12:33:17,280 [wrapper] ==== wrapper stdout END ====
[2026-01-09 04:33:17] 2026-01-09 12:33:17,282 [wrapper] ==== wrapper stderr END ====
[2026-01-09 04:33:17]  *** Error codes and diagnostics ***
[2026-01-09 04:33:17]     "exeErrorCode": 65,
[2026-01-09 04:33:17]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-01-09 04:33:17]     "pilotErrorCode": 1305,
[2026-01-09 04:33:17]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-01-09 04:33:17]  *** Listing of results directory ***
[2026-01-09 04:33:17] total 224192
[2026-01-09 04:33:17] -rw-r--r--. 1 boinc boinc    579449 Jan  8 20:21 pilot3.tar.gz
[2026-01-09 04:33:17] -rwx------. 1 boinc boinc     36322 Jan  8 20:25 runpilot2-wrapper.sh
[2026-01-09 04:33:17] -rw-r--r--. 1 boinc boinc      5112 Jan  8 20:30 queuedata.json
[2026-01-09 04:33:17] -rw-r--r--. 1 boinc boinc       100 Jan  9 04:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 04:33:17] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 04:29 run_atlas
[2026-01-09 04:33:17] -rw-r--r--. 1 boinc boinc       105 Jan  9 04:29 job.xml
[2026-01-09 04:33:17] -rw-r--r--. 2 boinc boinc 225459207 Jan  9 04:29 EVNT.47898824._001455.pool.root.1
[2026-01-09 04:33:17] -rw-r--r--. 2 boinc boinc    592401 Jan  9 04:29 input.tar.gz
[2026-01-09 04:33:17] -rw-r--r--. 1 boinc boinc      6594 Jan  9 04:29 init_data.xml
[2026-01-09 04:33:17] -rw-r--r--. 2 boinc boinc     15847 Jan  9 04:29 start_atlas.sh
[2026-01-09 04:33:17] drwxrwx--x. 2 boinc boinc      4096 Jan  9 04:29 shared
[2026-01-09 04:33:17] -rw-r--r--. 1 boinc boinc         0 Jan  9 04:29 boinc_lockfile
[2026-01-09 04:33:17] -rw-r--r--. 1 boinc boinc      2520 Jan  9 04:29 pandaJob.out
[2026-01-09 04:33:17] -rw-------. 1 boinc boinc    989377 Jan  9 04:30 agis_schedconf.cvmfs.json
[2026-01-09 04:33:17] -rw-------. 1 boinc boinc   1516240 Jan  9 04:30 agis_ddmendpoints.agis.ALL.json
[2026-01-09 04:33:17] drwx------. 5 boinc boinc      4096 Jan  9 04:30 pilot3
[2026-01-09 04:33:17] -rw-r--r--. 1 boinc boinc       521 Jan  9 04:30 boinc_task_state.xml
[2026-01-09 04:33:17] -rw-------. 1 boinc boinc       962 Jan  9 04:30 memory_monitor_summary.json
[2026-01-09 04:33:17] -rw-------. 1 boinc boinc     20548 Jan  9 04:30 log.47898826._037912.job.log.tgz.1
[2026-01-09 04:33:17] -rw-------. 1 boinc boinc      8386 Jan  9 04:32 heartbeat.json
[2026-01-09 04:33:17] -rw-r--r--. 1 boinc boinc      8192 Jan  9 04:33 boinc_mmap_file
[2026-01-09 04:33:17] -rw-r--r--. 1 boinc boinc        22 Jan  9 04:33 wrapper_checkpoint.txt
[2026-01-09 04:33:17] -rw-------. 1 boinc boinc        95 Jan  9 04:33 pilot_heartbeat.json
[2026-01-09 04:33:17] -rw-------. 1 boinc boinc       892 Jan  9 04:33 pilotlog.txt
[2026-01-09 04:33:17] -rw-------. 1 boinc boinc     81410 Jan  9 04:33 log.47898826._037912.job.log.1
[2026-01-09 04:33:17] -rw-------. 1 boinc boinc       188 Jan  9 04:33 output.list
[2026-01-09 04:33:17] -rw-r--r--. 1 boinc boinc       620 Jan  9 04:33 runtime_log
[2026-01-09 04:33:17] -rw-------. 1 boinc boinc    122880 Jan  9 04:33 result.tar.gz
[2026-01-09 04:33:17] -rw-r--r--. 1 boinc boinc      8636 Jan  9 04:33 runtime_log.err
[2026-01-09 04:33:17] -rw-------. 1 boinc boinc       645 Jan  9 04:33 QcBMDmLFJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmg9gKDmw0EuKo.diag
[2026-01-09 04:33:17] -rw-r--r--. 1 boinc boinc     21616 Jan  9 04:33 stderr.txt
[2026-01-09 04:33:17] No HITS result produced
[2026-01-09 04:33:17]  *** Contents of shared directory: ***
[2026-01-09 04:33:17] total 220896
[2026-01-09 04:33:17] -rw-r--r--. 2 boinc boinc 225459207 Jan  9 04:29 ATLAS.root_0
[2026-01-09 04:33:17] -rw-r--r--. 2 boinc boinc    592401 Jan  9 04:29 input.tar.gz
[2026-01-09 04:33:17] -rw-r--r--. 2 boinc boinc     15847 Jan  9 04:29 start_atlas.sh
[2026-01-09 04:33:17] -rw-------. 1 boinc boinc    122880 Jan  9 04:33 result.tar.gz
04:33:18 (361546): run_atlas exited; CPU time 21.206110
04:33:18 (361546): called boinc_finish(0)

</stderr_txt>
]]>

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