Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:36:25 (3932809): wrapper (7.7.26015): starting
13:36:25 (3932809): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 13:36:25] Arguments: --nthreads 8
[2026-01-09 13:36:25] Threads: 8
[2026-01-09 13:36:25] Checking for CVMFS
[2026-01-09 13:36:26] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 13:36:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 13:36:26] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 13:36:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 13:36:27] 2.13.3.0 8081 21870 163848 154952 1 305 36074851 39288832 8921 16776704 0 9533521 99.591 9240838 35455 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 13:36:27] CVMFS is ok
[2026-01-09 13:36:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 13:36:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 13:36:28] Further information can be found at the LHC@home message board.
[2026-01-09 13:36:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 13:36:28] Checking for apptainer binary...
[2026-01-09 13:36:28] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 13:36:28] Running /usr/bin/apptainer --version
[2026-01-09 13:36:28] apptainer version 1.4.5-2.el9
[2026-01-09 13:36:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 13:36:28] c-210-13.aglt2.org
[2026-01-09 13:36:28] apptainer works
[2026-01-09 13:36:28] Set ATHENA_PROC_NUMBER=8
[2026-01-09 13:36:28] Set ATHENA_CORE_NUMBER=8
[2026-01-09 13:36:28] Starting ATLAS job with PandaID=6963192126
[2026-01-09 13:36:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 19:50:32]  *** The last 200 lines of the pilot log: ***
[2026-01-09 19:50:32] 2026-01-10 00:49:34,076 | INFO     | monitor loop #1483: job 0:6963192126 is in state 'finished'
[2026-01-09 19:50:32] 2026-01-10 00:49:34,076 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 19:50:32] 2026-01-10 00:49:34,665 | INFO     | time since job start (22305s) is within the limit (349056.0s)
[2026-01-09 19:50:32] 2026-01-10 00:49:36,583 | INFO     | monitor loop #1484: job 0:6963192126 is in state 'finished'
[2026-01-09 19:50:32] 2026-01-10 00:49:36,583 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 19:50:32] 2026-01-10 00:49:36,675 | INFO     | time since job start (22307s) is within the limit (349056.0s)
[2026-01-09 19:50:32] 2026-01-10 00:49:38,682 | INFO     | time since job start (22309s) is within the limit (349056.0s)
[2026-01-09 19:50:32] 2026-01-10 00:49:39,090 | INFO     | monitor loop #1485: job 0:6963192126 is in state 'finished'
[2026-01-09 19:50:32] 2026-01-10 00:49:39,090 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 19:50:32] 2026-01-10 00:49:40,294 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 19:50:32] 2026-01-10 00:49:40,305 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.1764000000007
[2026-01-09 19:50:32] 2026-01-10 00:49:40,320 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963192126/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 19:50:32] 2026-01-10 00:49:40,321 | INFO     | extracted standard info from prmon json
[2026-01-09 19:50:32] 2026-01-10 00:49:40,321 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 19:50:32] 2026-01-10 00:49:40,321 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 19:50:32] 2026-01-10 00:49:40,325 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 19:50:32] 2026-01-10 00:49:40,325 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 19:50:32] 2026-01-10 00:49:40,337 | INFO     | fitting pss+swap vs Time
[2026-01-09 19:50:32] 2026-01-10 00:49:40,343 | INFO     | sum of square deviations: 14953586246.008207
[2026-01-09 19:50:32] 2026-01-10 00:49:40,350 | INFO     | sum of deviations: 102441613930.84608
[2026-01-09 19:50:32] 2026-01-10 00:49:40,351 | INFO     | mean x: 1767995086.0906594
[2026-01-09 19:50:32] 2026-01-10 00:49:40,351 | INFO     | mean y: 2481952.3076923075
[2026-01-09 19:50:32] 2026-01-10 00:49:40,351 | INFO     | intersect: -12109413285.483877
[2026-01-09 19:50:32] 2026-01-10 00:49:40,352 | INFO     | chi2: 3.067207933642911
[2026-01-09 19:50:32] 2026-01-10 00:49:40,352 | INFO     | sum of square deviations: 14345785538.434467
[2026-01-09 19:50:32] 2026-01-10 00:49:40,360 | INFO     | sum of deviations: 123446064701.28127
[2026-01-09 19:50:32] 2026-01-10 00:49:40,360 | INFO     | mean x: 1767994933.5961003
[2026-01-09 19:50:32] 2026-01-10 00:49:40,360 | INFO     | mean y: 2487158.6295264624
[2026-01-09 19:50:32] 2026-01-10 00:49:40,361 | INFO     | intersect: -15211180742.616623
[2026-01-09 19:50:32] 2026-01-10 00:49:40,361 | INFO     | chi2: 2.389749104691587
[2026-01-09 19:50:32] 2026-01-10 00:49:40,361 | INFO     | current chi2=2.389749104691587 (change=22.087150385879085 %)
[2026-01-09 19:50:32] 2026-01-10 00:49:40,361 | INFO     | right removable region: 358
[2026-01-09 19:50:32] 2026-01-10 00:49:40,366 | INFO     | sum of square deviations: 14345742960.80776
[2026-01-09 19:50:32] 2026-01-10 00:49:40,370 | INFO     | sum of deviations: 22216285069.434547
[2026-01-09 19:50:32] 2026-01-10 00:49:40,375 | INFO     | mean x: 1767995238.5905292
[2026-01-09 19:50:32] 2026-01-10 00:49:40,375 | INFO     | mean y: 2502003.1866295263
[2026-01-09 19:50:32] 2026-01-10 00:49:40,375 | INFO     | intersect: -2735473041.3431325
[2026-01-09 19:50:32] 2026-01-10 00:49:40,376 | INFO     | chi2: 0.9333824895692786
[2026-01-09 19:50:32] 2026-01-10 00:49:40,376 | INFO     | current chi2=0.9333824895692786 (change=69.56898554768983 %)
[2026-01-09 19:50:32] 2026-01-10 00:49:40,376 | INFO     | sum of square deviations: 13754619556.285297
[2026-01-09 19:50:32] 2026-01-10 00:49:40,384 | INFO     | sum of deviations: -3650823049.751419
[2026-01-09 19:50:32] 2026-01-10 00:49:40,384 | INFO     | mean x: 1767995391.0875707
[2026-01-09 19:50:32] 2026-01-10 00:49:40,384 | INFO     | mean y: 2508669.0564971752
[2026-01-09 19:50:32] 2026-01-10 00:49:40,385 | INFO     | intersect: 471779251.14884394
[2026-01-09 19:50:32] 2026-01-10 00:49:40,385 | INFO     | chi2: 0.7422418522543832
[2026-01-09 19:50:32] 2026-01-10 00:49:40,385 | INFO     | current chi2=0.7422418522543832 (change=20.478275460588478 %)
[2026-01-09 19:50:32] 2026-01-10 00:49:40,385 | INFO     | left removable region: 20
[2026-01-09 19:50:32] 2026-01-10 00:49:40,390 | INFO     | sum of square deviations: 11972593299.680452
[2026-01-09 19:50:32] 2026-01-10 00:49:40,393 | INFO     | sum of deviations: 14458026656.08877
[2026-01-09 19:50:32] 2026-01-10 00:49:40,394 | INFO     | mean x: 1767995513.0828402
[2026-01-09 19:50:32] 2026-01-10 00:49:40,394 | INFO     | mean y: 2515327.0325443787
[2026-01-09 19:50:32] 2026-01-10 00:49:40,398 | INFO     | intersect: -2132504682.0977488
[2026-01-09 19:50:32] 2026-01-10 00:49:40,399 | INFO     | chi2: 0.01987613610278035
[2026-01-09 19:50:32] 2026-01-10 00:49:40,399 | INFO     | current memory leak: 1.21 B/s (using 338 data points, chi2=0.02)
[2026-01-09 19:50:32] 2026-01-10 00:49:40,400 | INFO     | could have reported an average CPU frequency of 2600 MHz (16 samples)
[2026-01-09 19:50:32] 2026-01-10 00:49:40,400 | INFO     | ..............................
[2026-01-09 19:50:32] 2026-01-10 00:49:40,400 | INFO     | . Timing measurements:
[2026-01-09 19:50:32] 2026-01-10 00:49:40,400 | INFO     | . get job = 1 s
[2026-01-09 19:50:32] 2026-01-10 00:49:40,400 | INFO     | . initial setup = 17 s
[2026-01-09 19:50:32] 2026-01-10 00:49:40,400 | INFO     | . payload setup = 42 s
[2026-01-09 19:50:32] 2026-01-10 00:49:40,401 | INFO     | . stage-in = 0 s
[2026-01-09 19:50:32] 2026-01-10 00:49:40,401 | INFO     | . payload execution = 22175 s
[2026-01-09 19:50:32] 2026-01-10 00:49:40,401 | INFO     | . stage-out = 3 s
[2026-01-09 19:50:32] 2026-01-10 00:49:40,401 | INFO     | . log creation = 0 s
[2026-01-09 19:50:32] 2026-01-10 00:49:40,401 | INFO     | ..............................
[2026-01-09 19:50:32] 2026-01-10 00:49:40,591 | INFO     | 
[2026-01-09 19:50:32] 2026-01-10 00:49:40,592 | INFO     | job summary report
[2026-01-09 19:50:32] 2026-01-10 00:49:40,592 | INFO     | --------------------------------------------------
[2026-01-09 19:50:32] 2026-01-10 00:49:40,592 | INFO     | PanDA job id: 6963192126
[2026-01-09 19:50:32] 2026-01-10 00:49:40,592 | INFO     | task id: 47898826
[2026-01-09 19:50:32] 2026-01-10 00:49:40,592 | INFO     | errors: (none)
[2026-01-09 19:50:32] 2026-01-10 00:49:40,592 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 19:50:32] 2026-01-10 00:49:40,592 | INFO     | pilot state: finished 
[2026-01-09 19:50:32] 2026-01-10 00:49:40,593 | INFO     | transexitcode: 0
[2026-01-09 19:50:32] 2026-01-10 00:49:40,593 | INFO     | exeerrorcode: 0
[2026-01-09 19:50:32] 2026-01-10 00:49:40,593 | INFO     | exeerrordiag: 
[2026-01-09 19:50:32] 2026-01-10 00:49:40,593 | INFO     | exitcode: 0
[2026-01-09 19:50:32] 2026-01-10 00:49:40,593 | INFO     | exitmsg: OK
[2026-01-09 19:50:32] 2026-01-10 00:49:40,593 | INFO     | cpuconsumptiontime: 64391 s
[2026-01-09 19:50:32] 2026-01-10 00:49:40,593 | INFO     | nevents: 400
[2026-01-09 19:50:32] 2026-01-10 00:49:40,593 | INFO     | neventsw: 0
[2026-01-09 19:50:32] 2026-01-10 00:49:40,593 | INFO     | pid: 3945339
[2026-01-09 19:50:32] 2026-01-10 00:49:40,593 | INFO     | pgrp: 3945339
[2026-01-09 19:50:32] 2026-01-10 00:49:40,594 | INFO     | corecount: 8
[2026-01-09 19:50:32] 2026-01-10 00:49:40,594 | INFO     | event service: False
[2026-01-09 19:50:32] 2026-01-10 00:49:40,594 | INFO     | sizes: {0: 2283143, 1: 2283744, 3: 2283828, 4: 2283856, 5: 2284111, 17: 2284111, 28: 2284267, 33: 2284557, 39: 2284613, 22222: 2319236, 22227: 2328234, 22228: 2328
[2026-01-09 19:50:32] 2026-01-10 00:49:40,594 | INFO     | --------------------------------------------------
[2026-01-09 19:50:32] 2026-01-10 00:49:40,594 | INFO     | 
[2026-01-09 19:50:32] 2026-01-10 00:49:40,594 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 19:50:32] 2026-01-10 00:49:40,641 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 19:50:32] 2026-01-10 00:49:40,641 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 19:50:32] 2026-01-10 00:49:40,641 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 19:50:32] 2026-01-10 00:49:40,641 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 19:50:32] 2026-01-10 00:49:40,641 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 19:50:32] 2026-01-10 00:49:40,642 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 19:50:32] 2026-01-10 00:49:40,642 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 19:50:32] 2026-01-10 00:49:40,642 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 19:50:32] 2026-01-10 00:49:40,642 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 19:50:32] 2026-01-10 00:49:40,642 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 19:50:32] 2026-01-10 00:49:40,642 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 19:50:32] 2026-01-10 00:49:40,642 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 19:50:32] 2026-01-10 00:49:40,642 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 19:50:32] 2026-01-10 00:49:40,642 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 19:50:32] 2026-01-10 00:49:40,643 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 19:50:32] 2026-01-10 00:49:40,643 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 19:50:32] 2026-01-10 00:49:40,643 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 19:50:32] 2026-01-10 00:49:40,643 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 19:50:32] 2026-01-10 00:49:40,643 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 19:50:32] 2026-01-10 00:49:40,643 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 19:50:32] 2026-01-10 00:49:40,643 | INFO     | job 6963192126 has completed (purged errors)
[2026-01-09 19:50:32] 2026-01-10 00:49:40,643 | INFO     | overall cleanup function is called
[2026-01-09 19:50:32] 2026-01-10 00:49:41,653 | INFO     | --- collectZombieJob: --- 10, [3945339]
[2026-01-09 19:50:32] 2026-01-10 00:49:41,653 | INFO     | zombie collector waiting for pid 3945339
[2026-01-09 19:50:32] 2026-01-10 00:49:41,653 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 19:50:32] 2026-01-10 00:49:41,654 | INFO     | collected zombie processes
[2026-01-09 19:50:32] 2026-01-10 00:49:41,654 | INFO     | will attempt to kill all subprocesses of pid=3945339
[2026-01-09 19:50:32] 2026-01-10 00:49:42,276 | INFO     | process IDs to be killed: [3945339] (in reverse order)
[2026-01-09 19:50:32] 2026-01-10 00:49:42,444 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 19:50:32] 2026-01-10 00:49:42,444 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 19:50:32] 2026-01-10 00:49:42,460 | INFO     | did not find any defunct processes belonging to 3945339
[2026-01-09 19:50:32] 2026-01-10 00:49:42,475 | INFO     | did not find any defunct processes belonging to 3945339
[2026-01-09 19:50:32] 2026-01-10 00:49:42,476 | INFO     | ready for new job
[2026-01-09 19:50:32] 2026-01-10 00:49:42,476 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 19:50:32] 2026-01-10 00:49:42,478 | INFO     | ***************************************
[2026-01-09 19:50:32] 2026-01-10 00:49:42,483 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 19:50:32] 2026-01-10 00:49:42,483 | INFO     | ***************************************
[2026-01-09 19:50:32] 2026-01-10 00:49:42,483 | INFO     | 
[2026-01-09 19:50:32] 2026-01-10 00:49:42,485 | INFO     | architecture information:
[2026-01-09 19:50:32] 2026-01-10 00:49:42,486 | INFO     | executing command: cat /etc/os-release
[2026-01-09 19:50:32] 2026-01-10 00:49:42,526 | INFO     | cat /etc/os-release:
[2026-01-09 19:50:32] NAME="CentOS Linux"
[2026-01-09 19:50:32] VERSION="7 (Core)"
[2026-01-09 19:50:32] ID="centos"
[2026-01-09 19:50:32] ID_LIKE="rhel fedora"
[2026-01-09 19:50:32] VERSION_ID="7"
[2026-01-09 19:50:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 19:50:32] ANSI_COLOR="0;31"
[2026-01-09 19:50:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 19:50:32] HOME_URL="https://www.centos.org/"
[2026-01-09 19:50:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 19:50:32] 
[2026-01-09 19:50:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 19:50:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 19:50:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 19:50:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 19:50:32] 
[2026-01-09 19:50:32] 2026-01-10 00:49:42,527 | INFO     | ***************************************
[2026-01-09 19:50:32] 2026-01-10 00:49:43,030 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 19:50:32] 2026-01-10 00:49:43,178 | INFO     | sufficient remaining disk space (52925825024 B)
[2026-01-09 19:50:32] 2026-01-10 00:49:43,179 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 19:50:32] 2026-01-10 00:49:43,179 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 19:50:32] 2026-01-10 00:49:43,179 | INFO     | update_server=False
[2026-01-09 19:50:32] 2026-01-10 00:49:43,179 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 19:50:32] 2026-01-10 00:49:43,182 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 19:50:32] 2026-01-10 00:49:43,182 | INFO     | aborting loop
[2026-01-09 19:50:32] 2026-01-10 00:49:43,183 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 19:50:32] 2026-01-10 00:49:43,632 | INFO     | all data control threads have been joined
[2026-01-09 19:50:32] 2026-01-10 00:49:43,957 | INFO     | all job control threads have been joined
[2026-01-09 19:50:32] 2026-01-10 00:49:44,185 | INFO     | [job] retrieve thread has finished
[2026-01-09 19:50:32] 2026-01-10 00:49:44,188 | INFO     | [job] job monitor thread has finished
[2026-01-09 19:50:32] 2026-01-10 00:49:44,222 | INFO     | [data] copytool_in thread has finished
[2026-01-09 19:50:32] 2026-01-10 00:49:44,314 | INFO     | all payload control threads have been joined
[2026-01-09 19:50:32] 2026-01-10 00:49:44,423 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 19:50:32] 2026-01-10 00:49:44,629 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 19:50:32] 2026-01-10 00:49:44,638 | INFO     | [data] control thread has finished
[2026-01-09 19:50:32] 2026-01-10 00:49:44,938 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 19:50:32] 2026-01-10 00:49:44,963 | INFO     | [job] control thread has finished
[2026-01-09 19:50:32] 2026-01-10 00:49:45,102 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 19:50:32] 2026-01-10 00:49:45,273 | INFO     | [job] validate thread has finished
[2026-01-09 19:50:32] 2026-01-10 00:49:45,320 | INFO     | [payload] control thread has finished
[2026-01-09 19:50:32] 2026-01-10 00:49:45,378 | INFO     | [payload] validate_post thread has finished
[2026-01-09 19:50:32] 2026-01-10 00:49:45,418 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 19:50:32] 2026-01-10 00:49:45,513 | INFO     | [payload] failed_post thread has finished
[2026-01-09 19:50:32] 2026-01-10 00:49:45,610 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 19:50:32] 2026-01-10 00:49:46,616 | INFO     | [job] queue monitor thread has finished
[2026-01-09 19:50:32] 2026-01-10 00:49:46,637 | INFO     | [data] copytool_out thread has finished
[2026-01-09 19:50:32] 2026-01-10 00:49:47,192 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 19:50:32] 2026-01-10 00:50:12,083 | INFO     | PID=3938123 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 19:50:32] 2026-01-10 00:50:12,083 | INFO     | .. there are 7 such processes running
[2026-01-09 19:50:32] 2026-01-10 00:50:12,083 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 19:50:32] 2026-01-10 00:50:12,083 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 19:50:32] 2026-01-10 00:50:12,084 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 19:50:32] 2026-01-10 00:50:26,304 | INFO     | [monitor] cgroup control has ended
[2026-01-09 19:50:32] 2026-01-10 00:50:27,401 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140514849007424)>', '<ExcThread(monitor, started 140514452027136)>']
[2026-01-09 19:50:32] 2026-01-10 00:50:28,182 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 19:50:32] 2026-01-10 00:50:28,182 | INFO     | [monitor] control thread has ended
[2026-01-09 19:50:32] 2026-01-10 00:50:32,427 | INFO     | all workflow threads have been joined
[2026-01-09 19:50:32] 2026-01-10 00:50:32,427 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 19:50:32] 2026-01-10 00:50:32,428 | INFO     | traces error code: 0
[2026-01-09 19:50:32] 2026-01-10 00:50:32,428 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 19:50:32] 2026-01-10 00:50:32,653 [wrapper] ==== pilot stdout END ====
[2026-01-09 19:50:32] 2026-01-10 00:50:32,713 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 19:50:32] 2026-01-10 00:50:32,726 [wrapper] pilotpid: 3938123
[2026-01-09 19:50:32] 2026-01-10 00:50:32,755 [wrapper] Pilot exit status: 0
[2026-01-09 19:50:32] 2026-01-10 00:50:32,776 [wrapper] pandaids: 6963192126
[2026-01-09 19:50:32] 2026-01-10 00:50:32,831 [wrapper] cleanup supervisor_pilot  293376 3938124
[2026-01-09 19:50:32] 2026-01-10 00:50:32,835 [wrapper] Test setup, not cleaning
[2026-01-09 19:50:32] 2026-01-10 00:50:32,838 [wrapper] apfmon messages muted
[2026-01-09 19:50:32] 2026-01-10 00:50:32,840 [wrapper] ==== wrapper stdout END ====
[2026-01-09 19:50:32] 2026-01-10 00:50:32,843 [wrapper] ==== wrapper stderr END ====
[2026-01-09 19:50:32]  *** Error codes and diagnostics ***
[2026-01-09 19:50:32]     "exeErrorCode": 0,
[2026-01-09 19:50:32]     "exeErrorDiag": "",
[2026-01-09 19:50:32]     "pilotErrorCode": 0,
[2026-01-09 19:50:32]     "pilotErrorDiag": "",
[2026-01-09 19:50:32]  *** Listing of results directory ***
[2026-01-09 19:50:32] total 440536
[2026-01-09 19:50:32] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-09 19:50:32] -rwx------. 1 boincer umatlas     36322 Jan  8 23:25 runpilot2-wrapper.sh
[2026-01-09 19:50:32] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 23:30 queuedata.json
[2026-01-09 19:50:32] -rw-r--r--. 1 boincer umatlas       100 Jan  9 13:36 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 19:50:32] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 13:36 run_atlas
[2026-01-09 19:50:32] -rw-r--r--. 1 boincer umatlas       105 Jan  9 13:36 job.xml
[2026-01-09 19:50:32] -rw-r--r--. 2 boincer umatlas 226789598 Jan  9 13:36 EVNT.47898824._001498.pool.root.1
[2026-01-09 19:50:32] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 13:36 start_atlas.sh
[2026-01-09 19:50:32] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 13:36 shared
[2026-01-09 19:50:32] -rw-r--r--. 2 boincer umatlas    592400 Jan  9 13:36 input.tar.gz
[2026-01-09 19:50:32] -rw-r--r--. 1 boincer umatlas         0 Jan  9 13:36 boinc_lockfile
[2026-01-09 19:50:32] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 13:36 pandaJob.out
[2026-01-09 19:50:32] -rw-------. 1 boincer umatlas        57 Jan  9 13:36 setup.sh.local
[2026-01-09 19:50:32] -rw-------. 1 boincer umatlas    989372 Jan  9 13:37 agis_schedconf.cvmfs.json
[2026-01-09 19:50:32] drwx------. 5 boincer umatlas      4096 Jan  9 13:37 pilot3
[2026-01-09 19:50:32] -rw-r--r--. 1 boincer umatlas      6657 Jan  9 19:46 init_data.xml
[2026-01-09 19:50:32] -rw-------. 1 boincer umatlas 213288896 Jan  9 19:48 HITS.47898826._038994.pool.root.1
[2026-01-09 19:50:32] -rw-r--r--. 1 boincer umatlas       531 Jan  9 19:48 boinc_task_state.xml
[2026-01-09 19:50:32] -rw-------. 1 boincer umatlas      1040 Jan  9 19:49 memory_monitor_summary.json
[2026-01-09 19:50:32] -rw-------. 1 boincer umatlas        95 Jan  9 19:49 pilot_heartbeat.json
[2026-01-09 19:50:32] -rw-------. 1 boincer umatlas   1516240 Jan  9 19:49 agis_ddmendpoints.agis.ALL.json
[2026-01-09 19:50:32] -rw-------. 1 boincer umatlas    581838 Jan  9 19:49 log.47898826._038994.job.log.tgz.1
[2026-01-09 19:50:32] -rw-------. 1 boincer umatlas      7826 Jan  9 19:49 heartbeat.json
[2026-01-09 19:50:32] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 19:50 boinc_mmap_file
[2026-01-09 19:50:32] -rw-r--r--. 1 boincer umatlas        28 Jan  9 19:50 wrapper_checkpoint.txt
[2026-01-09 19:50:32] -rw-------. 1 boincer umatlas      4823 Jan  9 19:50 pilotlog.txt
[2026-01-09 19:50:32] -rw-------. 1 boincer umatlas   2971084 Jan  9 19:50 log.47898826._038994.job.log.1
[2026-01-09 19:50:32] -rw-------. 1 boincer umatlas       357 Jan  9 19:50 output.list
[2026-01-09 19:50:32] -rw-r--r--. 1 boincer umatlas       620 Jan  9 19:50 runtime_log
[2026-01-09 19:50:32] -rw-------. 1 boincer umatlas   3573760 Jan  9 19:50 result.tar.gz
[2026-01-09 19:50:32] -rw-r--r--. 1 boincer umatlas      9343 Jan  9 19:50 runtime_log.err
[2026-01-09 19:50:32] -rw-------. 1 boincer umatlas       657 Jan  9 19:50 jFfKDmZFJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmFNmKDmbpOkEn.diag
[2026-01-09 19:50:32] -rw-r--r--. 1 boincer umatlas     21464 Jan  9 19:50 stderr.txt
[2026-01-09 19:50:32] HITS file was successfully produced:
[2026-01-09 19:50:32] -rw-------. 1 boincer umatlas 213288896 Jan  9 19:48 shared/HITS.pool.root.1
[2026-01-09 19:50:32]  *** Contents of shared directory: ***
[2026-01-09 19:50:32] total 433864
[2026-01-09 19:50:32] -rw-r--r--. 2 boincer umatlas 226789598 Jan  9 13:36 ATLAS.root_0
[2026-01-09 19:50:32] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 13:36 start_atlas.sh
[2026-01-09 19:50:32] -rw-r--r--. 2 boincer umatlas    592400 Jan  9 13:36 input.tar.gz
[2026-01-09 19:50:32] -rw-------. 1 boincer umatlas 213288896 Jan  9 19:48 HITS.pool.root.1
[2026-01-09 19:50:32] -rw-------. 1 boincer umatlas   3573760 Jan  9 19:50 result.tar.gz
19:50:34 (3932809): run_atlas exited; CPU time 64788.384731
19:50:34 (3932809): called boinc_finish(0)

</stderr_txt>
]]>

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