Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:53:14 (3789856): wrapper (7.7.26015): starting
06:53:14 (3789856): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 06:53:14] Arguments: --nthreads 8
[2026-01-09 06:53:14] Threads: 8
[2026-01-09 06:53:14] Checking for CVMFS
[2026-01-09 06:53:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 06:53:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 06:53:14] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 06:53:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 06:53:15] 2.13.3.0 12537 93373 397360 154942 1 525 33305807 40960001 13548 16776704 43 376900289 99.602 394358973 37479 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 06:53:15] CVMFS is ok
[2026-01-09 06:53:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 06:53:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 06:53:15] Further information can be found at the LHC@home message board.
[2026-01-09 06:53:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 06:53:15] Checking for apptainer binary...
[2026-01-09 06:53:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 06:53:15] Running /usr/bin/apptainer --version
[2026-01-09 06:53:15] apptainer version 1.4.5-2.el9
[2026-01-09 06:53:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 06:53:15] c7-11-14.aglt2.org
[2026-01-09 06:53:15] apptainer works
[2026-01-09 06:53:15] Set ATHENA_PROC_NUMBER=8
[2026-01-09 06:53:15] Set ATHENA_CORE_NUMBER=8
[2026-01-09 06:53:15] Starting ATLAS job with PandaID=6963189585
[2026-01-09 06:53:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 11:46:25]  *** The last 200 lines of the pilot log: ***
[2026-01-09 11:46:25] 2026-01-09 16:45:26,036 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 11:46:25] 2026-01-09 16:45:26,971 | INFO     | time since job start (17497s) is within the limit (349056.0s)
[2026-01-09 11:46:25] 2026-01-09 16:45:28,541 | INFO     | monitor loop #1154: job 0:6963189585 is in state 'finished'
[2026-01-09 11:46:25] 2026-01-09 16:45:28,541 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 11:46:25] 2026-01-09 16:45:28,978 | INFO     | time since job start (17499s) is within the limit (349056.0s)
[2026-01-09 11:46:25] 2026-01-09 16:45:30,985 | INFO     | time since job start (17501s) is within the limit (349056.0s)
[2026-01-09 11:46:25] 2026-01-09 16:45:31,046 | INFO     | monitor loop #1155: job 0:6963189585 is in state 'finished'
[2026-01-09 11:46:25] 2026-01-09 16:45:31,046 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 11:46:25] 2026-01-09 16:45:31,943 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 11:46:25] 2026-01-09 16:45:31,977 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3290.3507812500006
[2026-01-09 11:46:25] 2026-01-09 16:45:32,065 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963189585/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 11:46:25] 2026-01-09 16:45:32,066 | INFO     | extracted standard info from prmon json
[2026-01-09 11:46:25] 2026-01-09 16:45:32,066 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 11:46:25] 2026-01-09 16:45:32,066 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 11:46:25] 2026-01-09 16:45:32,066 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 11:46:25] 2026-01-09 16:45:32,066 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 11:46:25] 2026-01-09 16:45:32,102 | INFO     | fitting pss+swap vs Time
[2026-01-09 11:46:25] 2026-01-09 16:45:32,102 | INFO     | sum of square deviations: 7253755079.328654
[2026-01-09 11:46:25] 2026-01-09 16:45:32,120 | INFO     | sum of deviations: 39012135587.23078
[2026-01-09 11:46:25] 2026-01-09 16:45:32,120 | INFO     | mean x: 1767968392.7062938
[2026-01-09 11:46:25] 2026-01-09 16:45:32,121 | INFO     | mean y: 2488253.0384615385
[2026-01-09 11:46:25] 2026-01-09 16:45:32,121 | INFO     | intersect: -9505996924.073404
[2026-01-09 11:46:25] 2026-01-09 16:45:32,121 | INFO     | chi2: 3.286276862538982
[2026-01-09 11:46:25] 2026-01-09 16:45:32,121 | INFO     | sum of square deviations: 6879933506.612093
[2026-01-09 11:46:25] 2026-01-09 16:45:32,153 | INFO     | sum of deviations: 55926993701.48395
[2026-01-09 11:46:25] 2026-01-09 16:45:32,153 | INFO     | mean x: 1767968240.2099645
[2026-01-09 11:46:25] 2026-01-09 16:45:32,153 | INFO     | mean y: 2495049.3985765125
[2026-01-09 11:46:25] 2026-01-09 16:45:32,153 | INFO     | intersect: -14369322431.049244
[2026-01-09 11:46:25] 2026-01-09 16:45:32,154 | INFO     | chi2: 2.614030712808095
[2026-01-09 11:46:25] 2026-01-09 16:45:32,154 | INFO     | current chi2=2.614030712808095 (change=20.456162942142033 %)
[2026-01-09 11:46:25] 2026-01-09 16:45:32,154 | INFO     | right removable region: 280
[2026-01-09 11:46:25] 2026-01-09 16:45:32,154 | INFO     | sum of square deviations: 6879914718.028518
[2026-01-09 11:46:25] 2026-01-09 16:45:32,156 | INFO     | sum of deviations: -29448056283.327385
[2026-01-09 11:46:25] 2026-01-09 16:45:32,156 | INFO     | mean x: 1767968545.2064056
[2026-01-09 11:46:25] 2026-01-09 16:45:32,156 | INFO     | mean y: 2516067.6263345196
[2026-01-09 11:46:25] 2026-01-09 16:45:32,156 | INFO     | intersect: 7569940862.872882
[2026-01-09 11:46:25] 2026-01-09 16:45:32,156 | INFO     | chi2: 0.8752189378258626
[2026-01-09 11:46:25] 2026-01-09 16:45:32,156 | INFO     | current chi2=0.8752189378258626 (change=73.36746188969401 %)
[2026-01-09 11:46:25] 2026-01-09 16:45:32,187 | INFO     | sum of square deviations: 6519179136.039873
[2026-01-09 11:46:25] 2026-01-09 16:45:32,189 | INFO     | sum of deviations: -40396243315.45291
[2026-01-09 11:46:25] 2026-01-09 16:45:32,189 | INFO     | mean x: 1767968697.6992753
[2026-01-09 11:46:25] 2026-01-09 16:45:32,189 | INFO     | mean y: 2520679.2355072466
[2026-01-09 11:46:25] 2026-01-09 16:45:32,189 | INFO     | intersect: 10957779339.261923
[2026-01-09 11:46:25] 2026-01-09 16:45:32,190 | INFO     | chi2: 0.802214199959963
[2026-01-09 11:46:25] 2026-01-09 16:45:32,190 | INFO     | current chi2=0.802214199959963 (change=8.341311494841637 %)
[2026-01-09 11:46:25] 2026-01-09 16:45:32,190 | INFO     | left removable region: 20
[2026-01-09 11:46:25] 2026-01-09 16:45:32,190 | INFO     | sum of square deviations: 5449956974.50383
[2026-01-09 11:46:25] 2026-01-09 16:45:32,223 | INFO     | sum of deviations: -16625735445.98461
[2026-01-09 11:46:25] 2026-01-09 16:45:32,223 | INFO     | mean x: 1767968819.6807692
[2026-01-09 11:46:25] 2026-01-09 16:45:32,223 | INFO     | mean y: 2525460.7230769233
[2026-01-09 11:46:25] 2026-01-09 16:45:32,223 | INFO     | intersect: 5395922511.428817
[2026-01-09 11:46:25] 2026-01-09 16:45:32,223 | INFO     | chi2: 0.09229441155987922
[2026-01-09 11:46:25] 2026-01-09 16:45:32,224 | INFO     | current memory leak: -3.05 B/s (using 260 data points, chi2=0.09)
[2026-01-09 11:46:25] 2026-01-09 16:45:32,224 | INFO     | could have reported an average CPU frequency of 3290 MHz (13 samples)
[2026-01-09 11:46:25] 2026-01-09 16:45:32,224 | INFO     | ..............................
[2026-01-09 11:46:25] 2026-01-09 16:45:32,224 | INFO     | . Timing measurements:
[2026-01-09 11:46:25] 2026-01-09 16:45:32,224 | INFO     | . get job = 0 s
[2026-01-09 11:46:25] 2026-01-09 16:45:32,224 | INFO     | . initial setup = 4 s
[2026-01-09 11:46:25] 2026-01-09 16:45:32,225 | INFO     | . payload setup = 21 s
[2026-01-09 11:46:25] 2026-01-09 16:45:32,225 | INFO     | . stage-in = 0 s
[2026-01-09 11:46:25] 2026-01-09 16:45:32,225 | INFO     | . payload execution = 17414 s
[2026-01-09 11:46:25] 2026-01-09 16:45:32,225 | INFO     | . stage-out = 3 s
[2026-01-09 11:46:25] 2026-01-09 16:45:32,225 | INFO     | . log creation = 0 s
[2026-01-09 11:46:25] 2026-01-09 16:45:32,225 | INFO     | ..............................
[2026-01-09 11:46:25] 2026-01-09 16:45:32,992 | INFO     | time since job start (17503s) is within the limit (349056.0s)
[2026-01-09 11:46:25] 2026-01-09 16:45:33,118 | INFO     | 
[2026-01-09 11:46:25] 2026-01-09 16:45:33,118 | INFO     | job summary report
[2026-01-09 11:46:25] 2026-01-09 16:45:33,118 | INFO     | --------------------------------------------------
[2026-01-09 11:46:25] 2026-01-09 16:45:33,118 | INFO     | PanDA job id: 6963189585
[2026-01-09 11:46:25] 2026-01-09 16:45:33,118 | INFO     | task id: 47898826
[2026-01-09 11:46:25] 2026-01-09 16:45:33,118 | INFO     | errors: (none)
[2026-01-09 11:46:25] 2026-01-09 16:45:33,118 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 11:46:25] 2026-01-09 16:45:33,119 | INFO     | pilot state: finished 
[2026-01-09 11:46:25] 2026-01-09 16:45:33,119 | INFO     | transexitcode: 0
[2026-01-09 11:46:25] 2026-01-09 16:45:33,119 | INFO     | exeerrorcode: 0
[2026-01-09 11:46:25] 2026-01-09 16:45:33,119 | INFO     | exeerrordiag: 
[2026-01-09 11:46:25] 2026-01-09 16:45:33,119 | INFO     | exitcode: 0
[2026-01-09 11:46:25] 2026-01-09 16:45:33,119 | INFO     | exitmsg: OK
[2026-01-09 11:46:25] 2026-01-09 16:45:33,119 | INFO     | cpuconsumptiontime: 45530 s
[2026-01-09 11:46:25] 2026-01-09 16:45:33,119 | INFO     | nevents: 400
[2026-01-09 11:46:25] 2026-01-09 16:45:33,119 | INFO     | neventsw: 0
[2026-01-09 11:46:25] 2026-01-09 16:45:33,119 | INFO     | pid: 3802051
[2026-01-09 11:46:25] 2026-01-09 16:45:33,119 | INFO     | pgrp: 3802051
[2026-01-09 11:46:25] 2026-01-09 16:45:33,119 | INFO     | corecount: 8
[2026-01-09 11:46:25] 2026-01-09 16:45:33,119 | INFO     | event service: False
[2026-01-09 11:46:25] 2026-01-09 16:45:33,119 | INFO     | sizes: {0: 2283800, 1: 2283999, 11: 2283999, 15: 2284289, 22: 2284317, 17441: 2316795, 17445: 2325793, 17446: 2325849, 17464: 2326043}
[2026-01-09 11:46:25] 2026-01-09 16:45:33,119 | INFO     | --------------------------------------------------
[2026-01-09 11:46:25] 2026-01-09 16:45:33,119 | INFO     | 
[2026-01-09 11:46:25] 2026-01-09 16:45:33,119 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-09 11:46:25] 2026-01-09 16:45:33,342 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 11:46:25] 2026-01-09 16:45:33,342 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 11:46:25] 2026-01-09 16:45:33,342 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 11:46:25] 2026-01-09 16:45:33,343 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 11:46:25] 2026-01-09 16:45:33,343 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 11:46:25] 2026-01-09 16:45:33,343 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 11:46:25] 2026-01-09 16:45:33,343 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 11:46:25] 2026-01-09 16:45:33,343 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 11:46:25] 2026-01-09 16:45:33,343 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 11:46:25] 2026-01-09 16:45:33,343 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 11:46:25] 2026-01-09 16:45:33,343 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 11:46:25] 2026-01-09 16:45:33,343 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 11:46:25] 2026-01-09 16:45:33,343 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 11:46:25] 2026-01-09 16:45:33,343 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 11:46:25] 2026-01-09 16:45:33,343 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 11:46:25] 2026-01-09 16:45:33,343 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 11:46:25] 2026-01-09 16:45:33,343 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 11:46:25] 2026-01-09 16:45:33,343 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 11:46:25] 2026-01-09 16:45:33,343 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 11:46:25] 2026-01-09 16:45:33,344 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 11:46:25] 2026-01-09 16:45:33,344 | INFO     | job 6963189585 has completed (purged errors)
[2026-01-09 11:46:25] 2026-01-09 16:45:33,344 | INFO     | overall cleanup function is called
[2026-01-09 11:46:25] 2026-01-09 16:45:34,382 | INFO     | --- collectZombieJob: --- 10, [3802051]
[2026-01-09 11:46:25] 2026-01-09 16:45:34,382 | INFO     | zombie collector waiting for pid 3802051
[2026-01-09 11:46:25] 2026-01-09 16:45:34,382 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 11:46:25] 2026-01-09 16:45:34,382 | INFO     | collected zombie processes
[2026-01-09 11:46:25] 2026-01-09 16:45:34,382 | INFO     | will attempt to kill all subprocesses of pid=3802051
[2026-01-09 11:46:25] 2026-01-09 16:45:36,421 | INFO     | process IDs to be killed: [3802051] (in reverse order)
[2026-01-09 11:46:25] 2026-01-09 16:45:36,984 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 11:46:25] 2026-01-09 16:45:36,994 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 11:46:25] 2026-01-09 16:45:37,098 | INFO     | did not find any defunct processes belonging to 3802051
[2026-01-09 11:46:25] 2026-01-09 16:45:37,201 | INFO     | did not find any defunct processes belonging to 3802051
[2026-01-09 11:46:25] 2026-01-09 16:45:37,201 | INFO     | ready for new job
[2026-01-09 11:46:25] 2026-01-09 16:45:37,201 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 11:46:25] 2026-01-09 16:45:37,205 | INFO     | ***************************************
[2026-01-09 11:46:25] 2026-01-09 16:45:37,205 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 11:46:25] 2026-01-09 16:45:37,205 | INFO     | ***************************************
[2026-01-09 11:46:25] 2026-01-09 16:45:37,205 | INFO     | 
[2026-01-09 11:46:25] 2026-01-09 16:45:37,220 | INFO     | architecture information:
[2026-01-09 11:46:25] 2026-01-09 16:45:37,236 | INFO     | executing command: cat /etc/os-release
[2026-01-09 11:46:25] 2026-01-09 16:45:37,286 | INFO     | cat /etc/os-release:
[2026-01-09 11:46:25] NAME="CentOS Linux"
[2026-01-09 11:46:25] VERSION="7 (Core)"
[2026-01-09 11:46:25] ID="centos"
[2026-01-09 11:46:25] ID_LIKE="rhel fedora"
[2026-01-09 11:46:25] VERSION_ID="7"
[2026-01-09 11:46:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 11:46:25] ANSI_COLOR="0;31"
[2026-01-09 11:46:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 11:46:25] HOME_URL="https://www.centos.org/"
[2026-01-09 11:46:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 11:46:25] 
[2026-01-09 11:46:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 11:46:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 11:46:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 11:46:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 11:46:25] 
[2026-01-09 11:46:25] 2026-01-09 16:45:37,286 | INFO     | ***************************************
[2026-01-09 11:46:25] 2026-01-09 16:45:37,787 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-09 11:46:25] 2026-01-09 16:45:37,936 | INFO     | sufficient remaining disk space (84910538752 B)
[2026-01-09 11:46:25] 2026-01-09 16:45:37,936 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 11:46:25] 2026-01-09 16:45:37,936 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 11:46:25] 2026-01-09 16:45:37,936 | INFO     | update_server=False
[2026-01-09 11:46:25] 2026-01-09 16:45:37,936 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 11:46:25] 2026-01-09 16:45:37,936 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 11:46:25] 2026-01-09 16:45:37,937 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 11:46:25] 2026-01-09 16:45:37,941 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 11:46:25] 2026-01-09 16:45:37,941 | INFO     | aborting loop
[2026-01-09 11:46:25] 2026-01-09 16:45:38,069 | INFO     | all job control threads have been joined
[2026-01-09 11:46:25] 2026-01-09 16:45:38,122 | INFO     | all data control threads have been joined
[2026-01-09 11:46:25] 2026-01-09 16:45:38,856 | INFO     | all payload control threads have been joined
[2026-01-09 11:46:25] 2026-01-09 16:45:38,937 | INFO     | [job] retrieve thread has finished
[2026-01-09 11:46:25] 2026-01-09 16:45:38,942 | INFO     | [job] queue monitor thread has finished
[2026-01-09 11:46:25] 2026-01-09 16:45:38,947 | INFO     | [job] job monitor thread has finished
[2026-01-09 11:46:25] 2026-01-09 16:45:39,075 | INFO     | [job] control thread has finished
[2026-01-09 11:46:25] 2026-01-09 16:45:39,103 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 11:46:25] 2026-01-09 16:45:39,128 | INFO     | [data] control thread has finished
[2026-01-09 11:46:25] 2026-01-09 16:45:39,301 | INFO     | [payload] failed_post thread has finished
[2026-01-09 11:46:25] 2026-01-09 16:45:39,430 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 11:46:25] 2026-01-09 16:45:39,718 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 11:46:25] 2026-01-09 16:45:39,862 | INFO     | [payload] control thread has finished
[2026-01-09 11:46:25] 2026-01-09 16:45:39,942 | INFO     | [data] copytool_out thread has finished
[2026-01-09 11:46:25] 2026-01-09 16:45:40,109 | INFO     | [job] validate thread has finished
[2026-01-09 11:46:25] 2026-01-09 16:45:40,117 | INFO     | [data] copytool_in thread has finished
[2026-01-09 11:46:25] 2026-01-09 16:45:40,125 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 11:46:25] 2026-01-09 16:45:40,322 | INFO     | [payload] validate_post thread has finished
[2026-01-09 11:46:25] 2026-01-09 16:45:40,437 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 11:46:25] 2026-01-09 16:45:43,141 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 11:46:25] 2026-01-09 16:46:06,952 | INFO     | PID=3793614 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 11:46:25] 2026-01-09 16:46:06,952 | INFO     | .. there are 11 such processes running
[2026-01-09 11:46:25] 2026-01-09 16:46:06,953 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 11:46:25] 2026-01-09 16:46:06,953 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 11:46:25] 2026-01-09 16:46:06,953 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 11:46:25] 2026-01-09 16:46:18,829 | INFO     | [monitor] cgroup control has ended
[2026-01-09 11:46:25] 2026-01-09 16:46:19,186 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140646817281856)>', '<ExcThread(monitor, started 140646329337600)>']
[2026-01-09 11:46:25] 2026-01-09 16:46:20,032 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 11:46:25] 2026-01-09 16:46:20,032 | INFO     | [monitor] control thread has ended
[2026-01-09 11:46:25] 2026-01-09 16:46:24,212 | INFO     | all workflow threads have been joined
[2026-01-09 11:46:25] 2026-01-09 16:46:24,212 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 11:46:25] 2026-01-09 16:46:24,212 | INFO     | traces error code: 0
[2026-01-09 11:46:25] 2026-01-09 16:46:24,212 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 11:46:25] 2026-01-09 16:46:24,874 [wrapper] ==== pilot stdout END ====
[2026-01-09 11:46:25] 2026-01-09 16:46:24,877 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 11:46:25] 2026-01-09 16:46:24,896 [wrapper] pilotpid: 3793614
[2026-01-09 11:46:25] 2026-01-09 16:46:24,899 [wrapper] Pilot exit status: 0
[2026-01-09 11:46:25] 2026-01-09 16:46:24,944 [wrapper] pandaids: 6963189585
[2026-01-09 11:46:25] 2026-01-09 16:46:25,017 [wrapper] cleanup supervisor_pilot  281544 3793615
[2026-01-09 11:46:25] 2026-01-09 16:46:25,019 [wrapper] Test setup, not cleaning
[2026-01-09 11:46:25] 2026-01-09 16:46:25,022 [wrapper] apfmon messages muted
[2026-01-09 11:46:25] 2026-01-09 16:46:25,056 [wrapper] ==== wrapper stdout END ====
[2026-01-09 11:46:25] 2026-01-09 16:46:25,093 [wrapper] ==== wrapper stderr END ====
[2026-01-09 11:46:25]  *** Error codes and diagnostics ***
[2026-01-09 11:46:25]     "exeErrorCode": 0,
[2026-01-09 11:46:25]     "exeErrorDiag": "",
[2026-01-09 11:46:25]     "pilotErrorCode": 0,
[2026-01-09 11:46:25]     "pilotErrorDiag": "",
[2026-01-09 11:46:25]  *** Listing of results directory ***
[2026-01-09 11:46:25] total 441168
[2026-01-09 11:46:25] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-09 11:46:25] -rwx------. 1 boincer umatlas     36322 Jan  8 23:25 runpilot2-wrapper.sh
[2026-01-09 11:46:25] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 23:30 queuedata.json
[2026-01-09 11:46:25] -rw-r--r--. 1 boincer umatlas       100 Jan  9 06:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 11:46:25] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 06:53 run_atlas
[2026-01-09 11:46:25] -rw-r--r--. 1 boincer umatlas       105 Jan  9 06:53 job.xml
[2026-01-09 11:46:25] -rw-r--r--. 2 boincer umatlas 225915674 Jan  9 06:53 EVNT.47898824._001477.pool.root.1
[2026-01-09 11:46:25] -rw-r--r--. 2 boincer umatlas    592401 Jan  9 06:53 input.tar.gz
[2026-01-09 11:46:25] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 06:53 start_atlas.sh
[2026-01-09 11:46:25] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 06:53 shared
[2026-01-09 11:46:25] -rw-r--r--. 1 boincer umatlas         0 Jan  9 06:53 boinc_lockfile
[2026-01-09 11:46:25] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 06:53 pandaJob.out
[2026-01-09 11:46:25] -rw-------. 1 boincer umatlas        57 Jan  9 06:53 setup.sh.local
[2026-01-09 11:46:25] -rw-------. 1 boincer umatlas    989377 Jan  9 06:53 agis_schedconf.cvmfs.json
[2026-01-09 11:46:25] drwx------. 5 boincer umatlas      4096 Jan  9 06:53 pilot3
[2026-01-09 11:46:25] -rw-r--r--. 1 boincer umatlas      6902 Jan  9 11:37 init_data.xml
[2026-01-09 11:46:25] -rw-------. 1 boincer umatlas 216291713 Jan  9 11:44 HITS.47898826._038454.pool.root.1
[2026-01-09 11:46:25] -rw-r--r--. 1 boincer umatlas       531 Jan  9 11:44 boinc_task_state.xml
[2026-01-09 11:46:25] -rw-------. 1 boincer umatlas      1045 Jan  9 11:45 memory_monitor_summary.json
[2026-01-09 11:46:25] -rw-------. 1 boincer umatlas   1516240 Jan  9 11:45 agis_ddmendpoints.agis.ALL.json
[2026-01-09 11:46:25] -rw-------. 1 boincer umatlas    495176 Jan  9 11:45 log.47898826._038454.job.log.tgz.1
[2026-01-09 11:46:25] -rw-------. 1 boincer umatlas      7780 Jan  9 11:45 heartbeat.json
[2026-01-09 11:46:25] -rw-------. 1 boincer umatlas        95 Jan  9 11:46 pilot_heartbeat.json
[2026-01-09 11:46:25] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 11:46 boinc_mmap_file
[2026-01-09 11:46:25] -rw-r--r--. 1 boincer umatlas        28 Jan  9 11:46 wrapper_checkpoint.txt
[2026-01-09 11:46:25] -rw-------. 1 boincer umatlas      4824 Jan  9 11:46 pilotlog.txt
[2026-01-09 11:46:25] -rw-------. 1 boincer umatlas   2317744 Jan  9 11:46 log.47898826._038454.job.log.1
[2026-01-09 11:46:25] -rw-------. 1 boincer umatlas       357 Jan  9 11:46 output.list
[2026-01-09 11:46:25] -rw-r--r--. 1 boincer umatlas       620 Jan  9 11:46 runtime_log
[2026-01-09 11:46:25] -rw-------. 1 boincer umatlas   2836480 Jan  9 11:46 result.tar.gz
[2026-01-09 11:46:25] -rw-r--r--. 1 boincer umatlas      9343 Jan  9 11:46 runtime_log.err
[2026-01-09 11:46:25] -rw-------. 1 boincer umatlas       655 Jan  9 11:46 lSiLDmMFJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmoMmKDmWiF3Rm.diag
[2026-01-09 11:46:25] -rw-r--r--. 1 boincer umatlas     21372 Jan  9 11:46 stderr.txt
[2026-01-09 11:46:25] HITS file was successfully produced:
[2026-01-09 11:46:25] -rw-------. 1 boincer umatlas 216291713 Jan  9 11:44 shared/HITS.pool.root.1
[2026-01-09 11:46:25]  *** Contents of shared directory: ***
[2026-01-09 11:46:25] total 435224
[2026-01-09 11:46:25] -rw-r--r--. 2 boincer umatlas 225915674 Jan  9 06:53 ATLAS.root_0
[2026-01-09 11:46:25] -rw-r--r--. 2 boincer umatlas    592401 Jan  9 06:53 input.tar.gz
[2026-01-09 11:46:25] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 06:53 start_atlas.sh
[2026-01-09 11:46:25] -rw-------. 1 boincer umatlas 216291713 Jan  9 11:44 HITS.pool.root.1
[2026-01-09 11:46:25] -rw-------. 1 boincer umatlas   2836480 Jan  9 11:46 result.tar.gz
11:46:48 (3789856): run_atlas exited; CPU time 45826.204834
11:46:48 (3789856): called boinc_finish(0)

</stderr_txt>
]]>

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