Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:53:12 (9249): wrapper (7.7.26015): starting
06:53:12 (9249): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 06:53:12] Arguments: --nthreads 8
[2026-01-09 06:53:12] Threads: 8
[2026-01-09 06:53:12] Checking for CVMFS
[2026-01-09 06:53:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 06:53:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 06:53:12] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 06:53:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 06:53:12] 2.11.2.0 4329 29667 150544 154942 2 188 6109588 18432000 1833 130560 0 7240375 99.770 1993680 22852 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 06:53:12] CVMFS is ok
[2026-01-09 06:53:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 06:53:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 06:53:12] Further information can be found at the LHC@home message board.
[2026-01-09 06:53:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 06:53:12] Checking for apptainer binary...
[2026-01-09 06:53:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 06:53:12] Running /usr/bin/apptainer --version
[2026-01-09 06:53:12] apptainer version 1.3.2-1.el7
[2026-01-09 06:53:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 06:53:13] c-206-17.aglt2.org
[2026-01-09 06:53:13] apptainer works
[2026-01-09 06:53:13] Set ATHENA_PROC_NUMBER=8
[2026-01-09 06:53:13] Set ATHENA_CORE_NUMBER=8
[2026-01-09 06:53:13] Starting ATLAS job with PandaID=6963188485
[2026-01-09 06:53:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 10:48:14]  *** The last 200 lines of the pilot log: ***
[2026-01-09 10:48:14] 2026-01-09 15:47:41,169 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2494.5833333333335
[2026-01-09 10:48:14] 2026-01-09 15:47:41,172 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963188485/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 10:48:14] 2026-01-09 15:47:41,172 | INFO     | extracted standard info from prmon json
[2026-01-09 10:48:14] 2026-01-09 15:47:41,172 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 10:48:14] 2026-01-09 15:47:41,173 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 10:48:14] 2026-01-09 15:47:41,173 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 10:48:14] 2026-01-09 15:47:41,173 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 10:48:14] 2026-01-09 15:47:41,176 | INFO     | fitting pss+swap vs Time
[2026-01-09 10:48:14] 2026-01-09 15:47:41,177 | INFO     | sum of square deviations: 3772712597.5
[2026-01-09 10:48:14] 2026-01-09 15:47:41,178 | INFO     | sum of deviations: 30355753788.000004
[2026-01-09 10:48:14] 2026-01-09 15:47:41,178 | INFO     | mean x: 1767966613.5
[2026-01-09 10:48:14] 2026-01-09 15:47:41,178 | INFO     | mean y: 2501214.269565217
[2026-01-09 10:48:14] 2026-01-09 15:47:41,178 | INFO     | intersect: -14222796323.73357
[2026-01-09 10:48:14] 2026-01-09 15:47:41,179 | INFO     | chi2: 1.6583327078067929
[2026-01-09 10:48:14] 2026-01-09 15:47:41,179 | INFO     | sum of square deviations: 3531973200.0
[2026-01-09 10:48:14] 2026-01-09 15:47:41,180 | INFO     | sum of deviations: 29478572567.999996
[2026-01-09 10:48:14] 2026-01-09 15:47:41,180 | INFO     | mean x: 1767966461.0
[2026-01-09 10:48:14] 2026-01-09 15:47:41,181 | INFO     | mean y: 2500659.026666667
[2026-01-09 10:48:14] 2026-01-09 15:47:41,181 | INFO     | intersect: -14753309950.855265
[2026-01-09 10:48:14] 2026-01-09 15:47:41,181 | INFO     | chi2: 1.659260609419212
[2026-01-09 10:48:14] 2026-01-09 15:47:41,181 | INFO     | current chi2=1.659260609419212 (change=-0.055953887181436186 %)
[2026-01-09 10:48:14] 2026-01-09 15:47:41,181 | INFO     | right removable region: 224
[2026-01-09 10:48:14] 2026-01-09 15:47:41,181 | INFO     | sum of square deviations: 3531973200.0
[2026-01-09 10:48:14] 2026-01-09 15:47:41,183 | INFO     | sum of deviations: -9521835808.999998
[2026-01-09 10:48:14] 2026-01-09 15:47:41,183 | INFO     | mean x: 1767966766.0
[2026-01-09 10:48:14] 2026-01-09 15:47:41,183 | INFO     | mean y: 2526275.8844444444
[2026-01-09 10:48:14] 2026-01-09 15:47:41,183 | INFO     | intersect: 4768782503.882074
[2026-01-09 10:48:14] 2026-01-09 15:47:41,183 | INFO     | chi2: 0.0693077796386707
[2026-01-09 10:48:14] 2026-01-09 15:47:41,183 | INFO     | current chi2=0.0693077796386707 (change=95.82063482723362 %)
[2026-01-09 10:48:14] 2026-01-09 15:47:41,184 | INFO     | sum of square deviations: 3301699115.0
[2026-01-09 10:48:14] 2026-01-09 15:47:41,185 | INFO     | sum of deviations: -14407914855.499998
[2026-01-09 10:48:14] 2026-01-09 15:47:41,185 | INFO     | mean x: 1767966918.5
[2026-01-09 10:48:14] 2026-01-09 15:47:41,185 | INFO     | mean y: 2529478.3772727274
[2026-01-09 10:48:14] 2026-01-09 15:47:41,185 | INFO     | intersect: 7717562236.317939
[2026-01-09 10:48:14] 2026-01-09 15:47:41,185 | INFO     | chi2: 0.033569327393908055
[2026-01-09 10:48:14] 2026-01-09 15:47:41,186 | INFO     | current chi2=0.033569327393908055 (change=51.56484947444797 %)
[2026-01-09 10:48:14] 2026-01-09 15:47:41,186 | INFO     | sum of square deviations: 3081657780.0
[2026-01-09 10:48:14] 2026-01-09 15:47:41,187 | INFO     | sum of deviations: -12602439631.000002
[2026-01-09 10:48:14] 2026-01-09 15:47:41,187 | INFO     | mean x: 1767967071.0
[2026-01-09 10:48:14] 2026-01-09 15:47:41,187 | INFO     | mean y: 2528224.1209302326
[2026-01-09 10:48:14] 2026-01-09 15:47:41,187 | INFO     | intersect: 7232629641.116491
[2026-01-09 10:48:14] 2026-01-09 15:47:41,188 | INFO     | chi2: 0.032985069851549
[2026-01-09 10:48:14] 2026-01-09 15:47:41,188 | INFO     | current chi2=0.032985069851549 (change=1.7404505473204255 %)
[2026-01-09 10:48:14] 2026-01-09 15:47:41,188 | INFO     | left removable region: 30
[2026-01-09 10:48:14] 2026-01-09 15:47:41,188 | INFO     | sum of square deviations: 2263977332.5
[2026-01-09 10:48:14] 2026-01-09 15:47:41,189 | INFO     | sum of deviations: -3448663487.0000005
[2026-01-09 10:48:14] 2026-01-09 15:47:41,189 | INFO     | mean x: 1767967345.5
[2026-01-09 10:48:14] 2026-01-09 15:47:41,189 | INFO     | mean y: 2520944.350515464
[2026-01-09 10:48:14] 2026-01-09 15:47:41,189 | INFO     | intersect: 2695624070.03482
[2026-01-09 10:48:14] 2026-01-09 15:47:41,190 | INFO     | chi2: 0.0177219238881323
[2026-01-09 10:48:14] 2026-01-09 15:47:41,190 | INFO     | current memory leak: -1.52 B/s (using 194 data points, chi2=0.02)
[2026-01-09 10:48:14] 2026-01-09 15:47:41,190 | INFO     | could have reported an average CPU frequency of 2576 MHz (11 samples)
[2026-01-09 10:48:14] 2026-01-09 15:47:41,190 | INFO     | ..............................
[2026-01-09 10:48:14] 2026-01-09 15:47:41,190 | INFO     | . Timing measurements:
[2026-01-09 10:48:14] 2026-01-09 15:47:41,191 | INFO     | . get job = 0 s
[2026-01-09 10:48:14] 2026-01-09 15:47:41,191 | INFO     | . initial setup = 2 s
[2026-01-09 10:48:14] 2026-01-09 15:47:41,191 | INFO     | . payload setup = 5 s
[2026-01-09 10:48:14] 2026-01-09 15:47:41,191 | INFO     | . stage-in = 0 s
[2026-01-09 10:48:14] 2026-01-09 15:47:41,191 | INFO     | . payload execution = 14020 s
[2026-01-09 10:48:14] 2026-01-09 15:47:41,191 | INFO     | . stage-out = 2 s
[2026-01-09 10:48:14] 2026-01-09 15:47:41,191 | INFO     | . log creation = 0 s
[2026-01-09 10:48:14] 2026-01-09 15:47:41,191 | INFO     | ..............................
[2026-01-09 10:48:14] 2026-01-09 15:47:41,531 | INFO     | 
[2026-01-09 10:48:14] 2026-01-09 15:47:41,531 | INFO     | job summary report
[2026-01-09 10:48:14] 2026-01-09 15:47:41,531 | INFO     | --------------------------------------------------
[2026-01-09 10:48:14] 2026-01-09 15:47:41,531 | INFO     | PanDA job id: 6963188485
[2026-01-09 10:48:14] 2026-01-09 15:47:41,532 | INFO     | task id: 47898826
[2026-01-09 10:48:14] 2026-01-09 15:47:41,532 | INFO     | errors: (none)
[2026-01-09 10:48:14] 2026-01-09 15:47:41,532 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 10:48:14] 2026-01-09 15:47:41,532 | INFO     | pilot state: finished 
[2026-01-09 10:48:14] 2026-01-09 15:47:41,532 | INFO     | transexitcode: 0
[2026-01-09 10:48:14] 2026-01-09 15:47:41,532 | INFO     | exeerrorcode: 0
[2026-01-09 10:48:14] 2026-01-09 15:47:41,533 | INFO     | exeerrordiag: 
[2026-01-09 10:48:14] 2026-01-09 15:47:41,533 | INFO     | exitcode: 0
[2026-01-09 10:48:14] 2026-01-09 15:47:41,533 | INFO     | exitmsg: OK
[2026-01-09 10:48:14] 2026-01-09 15:47:41,533 | INFO     | cpuconsumptiontime: 106586 s
[2026-01-09 10:48:14] 2026-01-09 15:47:41,533 | INFO     | nevents: 400
[2026-01-09 10:48:14] 2026-01-09 15:47:41,534 | INFO     | neventsw: 0
[2026-01-09 10:48:14] 2026-01-09 15:47:41,534 | INFO     | pid: 19357
[2026-01-09 10:48:14] 2026-01-09 15:47:41,534 | INFO     | pgrp: 19357
[2026-01-09 10:48:14] 2026-01-09 15:47:41,534 | INFO     | corecount: 8
[2026-01-09 10:48:14] 2026-01-09 15:47:41,534 | INFO     | event service: False
[2026-01-09 10:48:14] 2026-01-09 15:47:41,534 | INFO     | sizes: {0: 2283971, 1: 2283971, 4: 2284261, 12: 2284289, 14029: 2314750, 14032: 2323748, 14035: 2323932, 14042: 2324126}
[2026-01-09 10:48:14] 2026-01-09 15:47:41,535 | INFO     | --------------------------------------------------
[2026-01-09 10:48:14] 2026-01-09 15:47:41,535 | INFO     | 
[2026-01-09 10:48:14] 2026-01-09 15:47:41,535 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-09 10:48:14] 2026-01-09 15:47:41,557 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 10:48:14] 2026-01-09 15:47:41,558 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 10:48:14] 2026-01-09 15:47:41,558 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 10:48:14] 2026-01-09 15:47:41,558 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 10:48:14] 2026-01-09 15:47:41,558 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 10:48:14] 2026-01-09 15:47:41,559 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 10:48:14] 2026-01-09 15:47:41,559 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 10:48:14] 2026-01-09 15:47:41,559 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 10:48:14] 2026-01-09 15:47:41,559 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 10:48:14] 2026-01-09 15:47:41,559 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 10:48:14] 2026-01-09 15:47:41,559 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 10:48:14] 2026-01-09 15:47:41,560 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 10:48:14] 2026-01-09 15:47:41,560 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 10:48:14] 2026-01-09 15:47:41,560 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 10:48:14] 2026-01-09 15:47:41,560 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 10:48:14] 2026-01-09 15:47:41,560 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 10:48:14] 2026-01-09 15:47:41,561 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 10:48:14] 2026-01-09 15:47:41,561 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 10:48:14] 2026-01-09 15:47:41,561 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 10:48:14] 2026-01-09 15:47:41,561 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 10:48:14] 2026-01-09 15:47:41,561 | INFO     | job 6963188485 has completed (purged errors)
[2026-01-09 10:48:14] 2026-01-09 15:47:41,562 | INFO     | overall cleanup function is called
[2026-01-09 10:48:14] 2026-01-09 15:47:42,172 | INFO     | PID=12934 has CPU usage=10.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 10:48:14] 2026-01-09 15:47:42,172 | INFO     | .. there are 3 such processes running
[2026-01-09 10:48:14] 2026-01-09 15:47:42,570 | INFO     | --- collectZombieJob: --- 10, [19357]
[2026-01-09 10:48:14] 2026-01-09 15:47:42,570 | INFO     | zombie collector waiting for pid 19357
[2026-01-09 10:48:14] 2026-01-09 15:47:42,570 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 10:48:14] 2026-01-09 15:47:42,571 | INFO     | collected zombie processes
[2026-01-09 10:48:14] 2026-01-09 15:47:42,571 | INFO     | will attempt to kill all subprocesses of pid=19357
[2026-01-09 10:48:14] 2026-01-09 15:47:42,741 | INFO     | process IDs to be killed: [19357] (in reverse order)
[2026-01-09 10:48:14] 2026-01-09 15:47:42,815 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 10:48:14] 2026-01-09 15:47:42,815 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 10:48:14] 2026-01-09 15:47:42,821 | INFO     | did not find any defunct processes belonging to 19357
[2026-01-09 10:48:14] 2026-01-09 15:47:42,825 | INFO     | did not find any defunct processes belonging to 19357
[2026-01-09 10:48:14] 2026-01-09 15:47:42,826 | INFO     | ready for new job
[2026-01-09 10:48:14] 2026-01-09 15:47:42,826 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 10:48:14] 2026-01-09 15:47:42,828 | INFO     | ***************************************
[2026-01-09 10:48:14] 2026-01-09 15:47:42,828 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 10:48:14] 2026-01-09 15:47:42,828 | INFO     | ***************************************
[2026-01-09 10:48:14] 2026-01-09 15:47:42,828 | INFO     | 
[2026-01-09 10:48:14] 2026-01-09 15:47:42,829 | INFO     | architecture information:
[2026-01-09 10:48:14] 2026-01-09 15:47:42,830 | INFO     | executing command: cat /etc/os-release
[2026-01-09 10:48:14] 2026-01-09 15:47:42,844 | INFO     | cat /etc/os-release:
[2026-01-09 10:48:14] NAME="CentOS Linux"
[2026-01-09 10:48:14] VERSION="7 (Core)"
[2026-01-09 10:48:14] ID="centos"
[2026-01-09 10:48:14] ID_LIKE="rhel fedora"
[2026-01-09 10:48:14] VERSION_ID="7"
[2026-01-09 10:48:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 10:48:14] ANSI_COLOR="0;31"
[2026-01-09 10:48:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 10:48:14] HOME_URL="https://www.centos.org/"
[2026-01-09 10:48:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 10:48:14] 
[2026-01-09 10:48:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 10:48:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 10:48:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 10:48:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 10:48:14] 
[2026-01-09 10:48:14] 2026-01-09 15:47:42,844 | INFO     | ***************************************
[2026-01-09 10:48:14] 2026-01-09 15:47:43,347 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-09 10:48:14] 2026-01-09 15:47:43,365 | INFO     | sufficient remaining disk space (27755806720 B)
[2026-01-09 10:48:14] 2026-01-09 15:47:43,365 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 10:48:14] 2026-01-09 15:47:43,365 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 10:48:14] 2026-01-09 15:47:43,366 | INFO     | update_server=False
[2026-01-09 10:48:14] 2026-01-09 15:47:43,366 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 10:48:14] 2026-01-09 15:47:43,778 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 10:48:14] 2026-01-09 15:47:43,778 | INFO     | aborting loop
[2026-01-09 10:48:14] 2026-01-09 15:47:44,093 | INFO     | all payload control threads have been joined
[2026-01-09 10:48:14] 2026-01-09 15:47:44,162 | INFO     | all job control threads have been joined
[2026-01-09 10:48:14] 2026-01-09 15:47:44,371 | INFO     | [job] retrieve thread has finished
[2026-01-09 10:48:14] 2026-01-09 15:47:44,446 | INFO     | all data control threads have been joined
[2026-01-09 10:48:14] 2026-01-09 15:47:44,461 | INFO     | [payload] failed_post thread has finished
[2026-01-09 10:48:14] 2026-01-09 15:47:44,514 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 10:48:14] 2026-01-09 15:47:44,531 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 10:48:14] 2026-01-09 15:47:44,783 | INFO     | [job] job monitor thread has finished
[2026-01-09 10:48:14] 2026-01-09 15:47:44,960 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 10:48:14] 2026-01-09 15:47:45,033 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 10:48:14] 2026-01-09 15:47:45,098 | INFO     | [payload] control thread has finished
[2026-01-09 10:48:14] 2026-01-09 15:47:45,170 | INFO     | [job] control thread has finished
[2026-01-09 10:48:14] 2026-01-09 15:47:45,386 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 10:48:14] 2026-01-09 15:47:45,396 | INFO     | [data] copytool_in thread has finished
[2026-01-09 10:48:14] 2026-01-09 15:47:45,402 | INFO     | [job] validate thread has finished
[2026-01-09 10:48:14] 2026-01-09 15:47:45,452 | INFO     | [data] control thread has finished
[2026-01-09 10:48:14] 2026-01-09 15:47:45,696 | INFO     | [payload] validate_post thread has finished
[2026-01-09 10:48:14] 2026-01-09 15:47:46,159 | INFO     | [monitor] cgroup control has ended
[2026-01-09 10:48:14] 2026-01-09 15:47:46,356 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 10:48:14] 2026-01-09 15:47:46,520 | INFO     | [data] copytool_out thread has finished
[2026-01-09 10:48:14] 2026-01-09 15:47:47,361 | INFO     | [job] queue monitor thread has finished
[2026-01-09 10:48:14] 2026-01-09 15:47:49,392 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 10:48:14] 2026-01-09 15:47:53,865 | INFO     | job.realtimelogging is not enabled
[2026-01-09 10:48:14] 2026-01-09 15:47:54,870 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 10:48:14] 2026-01-09 15:47:54,910 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140029732038464)>', '<ExcThread(monitor, started 140029154293504)>']
[2026-01-09 10:48:14] 2026-01-09 15:47:59,935 | INFO     | all workflow threads have been joined
[2026-01-09 10:48:14] 2026-01-09 15:47:59,935 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 10:48:14] 2026-01-09 15:47:59,935 | INFO     | traces error code: 0
[2026-01-09 10:48:14] 2026-01-09 15:47:59,936 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 10:48:14] 2026-01-09 15:48:14,418 | INFO     | PID=12934 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 10:48:14] 2026-01-09 15:48:14,418 | INFO     | .. there are 3 such processes running
[2026-01-09 10:48:14] 2026-01-09 15:48:14,419 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 10:48:14] 2026-01-09 15:48:14,419 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 10:48:14] 2026-01-09 15:48:14,420 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 10:48:14] 2026-01-09 15:48:14,420 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 10:48:14] 2026-01-09 15:48:14,420 | INFO     | [monitor] control thread has ended
[2026-01-09 10:48:14] 2026-01-09 15:48:14,539 [wrapper] ==== pilot stdout END ====
[2026-01-09 10:48:14] 2026-01-09 15:48:14,541 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 10:48:14] 2026-01-09 15:48:14,544 [wrapper] pilotpid: 12934
[2026-01-09 10:48:14] 2026-01-09 15:48:14,546 [wrapper] Pilot exit status: 0
[2026-01-09 10:48:14] 2026-01-09 15:48:14,556 [wrapper] pandaids: 6963188485
[2026-01-09 10:48:14] 2026-01-09 15:48:14,583 [wrapper] cleanup supervisor_pilot 10656 12935
[2026-01-09 10:48:14] 2026-01-09 15:48:14,586 [wrapper] Test setup, not cleaning
[2026-01-09 10:48:14] 2026-01-09 15:48:14,592 [wrapper] apfmon messages muted
[2026-01-09 10:48:14] 2026-01-09 15:48:14,594 [wrapper] ==== wrapper stdout END ====
[2026-01-09 10:48:14] 2026-01-09 15:48:14,596 [wrapper] ==== wrapper stderr END ====
[2026-01-09 10:48:14]  *** Error codes and diagnostics ***
[2026-01-09 10:48:14]     "exeErrorCode": 0,
[2026-01-09 10:48:14]     "exeErrorDiag": "",
[2026-01-09 10:48:14]     "pilotErrorCode": 0,
[2026-01-09 10:48:14]     "pilotErrorDiag": "",
[2026-01-09 10:48:14]  *** Listing of results directory ***
[2026-01-09 10:48:14] total 438492
[2026-01-09 10:48:14] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-09 10:48:14] -rwx------ 1 boincer umatlas     36322 Jan  8 23:25 runpilot2-wrapper.sh
[2026-01-09 10:48:14] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 23:29 queuedata.json
[2026-01-09 10:48:14] -rw-r--r-- 1 boincer umatlas       100 Jan  9 06:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 10:48:14] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 06:53 run_atlas
[2026-01-09 10:48:14] -rw-r--r-- 1 boincer umatlas       105 Jan  9 06:53 job.xml
[2026-01-09 10:48:14] -rw-r--r-- 2 boincer umatlas 227403271 Jan  9 06:53 EVNT.47898824._001441.pool.root.1
[2026-01-09 10:48:14] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 06:53 start_atlas.sh
[2026-01-09 10:48:14] drwxrwx--x 2 boincer umatlas      4096 Jan  9 06:53 shared
[2026-01-09 10:48:14] -rw-r--r-- 2 boincer umatlas    592402 Jan  9 06:53 input.tar.gz
[2026-01-09 10:48:14] -rw-r--r-- 1 boincer umatlas         0 Jan  9 06:53 boinc_lockfile
[2026-01-09 10:48:14] -rw-r--r-- 1 boincer umatlas      2520 Jan  9 06:53 pandaJob.out
[2026-01-09 10:48:14] -rw------- 1 boincer umatlas        57 Jan  9 06:53 setup.sh.local
[2026-01-09 10:48:14] -rw------- 1 boincer umatlas    989377 Jan  9 06:53 agis_schedconf.cvmfs.json
[2026-01-09 10:48:14] drwx------ 5 boincer umatlas      4096 Jan  9 06:53 pilot3
[2026-01-09 10:48:14] -rw-r--r-- 1 boincer umatlas      5953 Jan  9 10:38 init_data.xml
[2026-01-09 10:48:14] -rw------- 1 boincer umatlas 212822590 Jan  9 10:46 HITS.47898826._037572.pool.root.1
[2026-01-09 10:48:14] -rw------- 1 boincer umatlas      1052 Jan  9 10:47 memory_monitor_summary.json
[2026-01-09 10:48:14] -rw-r--r-- 1 boincer umatlas       532 Jan  9 10:47 boinc_task_state.xml
[2026-01-09 10:48:14] -rw------- 1 boincer umatlas   1516240 Jan  9 10:47 agis_ddmendpoints.agis.ALL.json
[2026-01-09 10:48:14] -rw------- 1 boincer umatlas    478479 Jan  9 10:47 log.47898826._037572.job.log.tgz.1
[2026-01-09 10:48:14] -rw------- 1 boincer umatlas      7854 Jan  9 10:47 heartbeat.json
[2026-01-09 10:48:14] -rw-r--r-- 1 boincer umatlas        29 Jan  9 10:47 wrapper_checkpoint.txt
[2026-01-09 10:48:14] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 10:47 boinc_mmap_file
[2026-01-09 10:48:14] -rw------- 1 boincer umatlas        95 Jan  9 10:48 pilot_heartbeat.json
[2026-01-09 10:48:14] -rw------- 1 boincer umatlas       820 Jan  9 10:48 pilotlog.txt
[2026-01-09 10:48:14] -rw------- 1 boincer umatlas   1963909 Jan  9 10:48 log.47898826._037572.job.log.1
[2026-01-09 10:48:14] -rw------- 1 boincer umatlas       357 Jan  9 10:48 output.list
[2026-01-09 10:48:14] -rw-r--r-- 1 boincer umatlas       620 Jan  9 10:48 runtime_log
[2026-01-09 10:48:14] -rw------- 1 boincer umatlas   2457600 Jan  9 10:48 result.tar.gz
[2026-01-09 10:48:14] -rw-r--r-- 1 boincer umatlas      9343 Jan  9 10:48 runtime_log.err
[2026-01-09 10:48:14] -rw------- 1 boincer umatlas       662 Jan  9 10:48 DvFNDm8EJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmn8gKDmEZmqFn.diag
[2026-01-09 10:48:14] -rw-r--r-- 1 boincer umatlas     21164 Jan  9 10:48 stderr.txt
[2026-01-09 10:48:14] HITS file was successfully produced:
[2026-01-09 10:48:14] -rw------- 1 boincer umatlas 212822590 Jan  9 10:46 shared/HITS.pool.root.1
[2026-01-09 10:48:14]  *** Contents of shared directory: ***
[2026-01-09 10:48:14] total 432912
[2026-01-09 10:48:14] -rw-r--r-- 2 boincer umatlas 227403271 Jan  9 06:53 ATLAS.root_0
[2026-01-09 10:48:14] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 06:53 start_atlas.sh
[2026-01-09 10:48:14] -rw-r--r-- 2 boincer umatlas    592402 Jan  9 06:53 input.tar.gz
[2026-01-09 10:48:14] -rw------- 1 boincer umatlas 212822590 Jan  9 10:46 HITS.pool.root.1
[2026-01-09 10:48:14] -rw------- 1 boincer umatlas   2457600 Jan  9 10:48 result.tar.gz
10:48:16 (9249): run_atlas exited; CPU time 106865.074372
10:48:16 (9249): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN