Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:25:21 (1087400): wrapper (7.7.26015): starting
04:25:21 (1087400): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 04:25:21] Arguments: --nthreads 12
[2026-01-09 04:25:21] Threads: 12
[2026-01-09 04:25:21] Checking for CVMFS
[2026-01-09 04:25:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 04:25:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 04:25:22] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 04:25:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 04:25:22] 2.11.5.0 886365 56548 212764 154942 0 695 27384436 45568001 11568 130560 0 385377773 99.795 236415964 22630 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2026-01-09 04:25:22] CVMFS is ok
[2026-01-09 04:25:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 04:25:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 04:25:22] Further information can be found at the LHC@home message board.
[2026-01-09 04:25:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 04:25:22] Checking for apptainer binary...
[2026-01-09 04:25:22] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 04:25:22] Running /usr/bin/apptainer --version
[2026-01-09 04:25:22] apptainer version 1.4.1-1.el9
[2026-01-09 04:25:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 04:25:22] wns0063.triumf.lcg
[2026-01-09 04:25:22] apptainer works
[2026-01-09 04:25:22] Set ATHENA_PROC_NUMBER=12
[2026-01-09 04:25:22] Set ATHENA_CORE_NUMBER=12
[2026-01-09 04:25:22] Starting ATLAS job with PandaID=6963189476
[2026-01-09 04:25:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 04:28:40]  *** The last 200 lines of the pilot log: ***
[2026-01-09 04:28:40] 2026-01-09 12:28:08,899 | WARNING  | found no stored workdir sizes
[2026-01-09 04:28:40] 2026-01-09 12:28:08,899 | INFO     | will not add max space = 0 B to job metrics
[2026-01-09 04:28:40] 2026-01-09 12:28:08,899 | WARNING  | wrong length of table data, x=[1767961554.0], y=[2242.0] (must be same and length>=4)
[2026-01-09 04:28:40] 2026-01-09 12:28:08,899 | INFO     | could have reported an average CPU frequency of 2706 MHz (4 samples)
[2026-01-09 04:28:40] 2026-01-09 12:28:08,900 | INFO     | ..............................
[2026-01-09 04:28:40] 2026-01-09 12:28:08,900 | INFO     | . Timing measurements:
[2026-01-09 04:28:40] 2026-01-09 12:28:08,900 | INFO     | . get job = 0 s
[2026-01-09 04:28:40] 2026-01-09 12:28:08,900 | INFO     | . initial setup = 2 s
[2026-01-09 04:28:40] 2026-01-09 12:28:08,900 | INFO     | . payload setup = 4 s
[2026-01-09 04:28:40] 2026-01-09 12:28:08,900 | INFO     | . stage-in = 0 s
[2026-01-09 04:28:40] 2026-01-09 12:28:08,900 | INFO     | . payload execution = 15 s
[2026-01-09 04:28:40] 2026-01-09 12:28:08,900 | INFO     | . stage-out = 0 s
[2026-01-09 04:28:40] 2026-01-09 12:28:08,900 | INFO     | . log creation = 0 s
[2026-01-09 04:28:40] 2026-01-09 12:28:08,900 | INFO     | ..............................
[2026-01-09 04:28:40] 2026-01-09 12:28:08,900 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-09 04:28:40] 2026-01-09 12:28:08,900 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963189476/pilotlog.txt
[2026-01-09 04:28:40] 2026-01-09 12:28:08,910 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-01-09 04:28:40] - Log from pilotlog.txt -
[2026-01-09 04:28:40] 2026-01-09 12:28:08,898 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 04:28:40] 2026-01-09 12:28:08,898 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 04:28:40] 2026-01-09 12:28:08,898 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 04:28:40] 2026-01-09 12:28:08,899 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 04:28:40] 2026-01-09 12:28:08,899 | WARNING  | found no stored workdir sizes
[2026-01-09 04:28:40] 2026-01-09 12:28:08,899 | INFO     | will not add max space = 0 B to job metrics
[2026-01-09 04:28:40] 2026-01-09 12:28:08,899 | WARNING  | wrong length of table data, x=[1767961554.0], y=[2242.0] (must be same and length>=4)
[2026-01-09 04:28:40] 2026-01-09 12:28:08,899 | INFO     | could have reported an average CPU frequency of 2706 MHz (4 samples)
[2026-01-09 04:28:40] 2026-01-09 12:28:08,900 | INFO     | ..............................
[2026-01-09 04:28:40] 2026-01-09 12:28:08,900 | INFO     | . Timing measurements:
[2026-01-09 04:28:40] 2026-01-09 12:28:08,900 | INFO     | . get job = 0 s
[2026-01-09 04:28:40] 2026-01-09 12:28:08,900 | INFO     | . initial setup = 2 s
[2026-01-09 04:28:40] 2026-01-09 12:28:08,900 | INFO     | . payload setup = 4 s
[2026-01-09 04:28:40] 2026-01-09 12:28:08,900 | INFO     | . stage-in = 0 s
[2026-01-09 04:28:40] 2026-01-09 12:28:08,900 | INFO     | . payload execution = 15 s
[2026-01-09 04:28:40] 2026-01-09 12:28:08,900 | INFO     | . stage-out = 0 s
[2026-01-09 04:28:40] 2026-01-09 12:28:08,900 | INFO     | . log creation = 0 s
[2026-01-09 04:28:40] 2026-01-09 12:28:08,900 | INFO     | ..............................
[2026-01-09 04:28:40] 2026-01-09 12:28:08,900 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-09 04:28:40] 2026-01-09 12:28:08,900 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963189476/pilotlog.txt
[2026-01-09 04:28:40] 2026-01-09 12:28:08,910 | WARNING  | 
[2026-01-09 04:28:40] [begin log extracts]
[2026-01-09 04:28:40] - Log from pilotlog.txt -
[2026-01-09 04:28:40] 2026-01-09 12:28:08,898 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 04:28:40] 2026-01-09 12:28:08,898 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 04:28:40] 2026-01-09 12:28:08,898 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 04:28:40] 2026-01-09 12:28:08,899 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 04:28:40] 2026-01-09 12:28:08,899 | WARNING  | found no stored workdir sizes
[2026-01-09 04:28:40] 2026-01-09 12:28:08,899 | INFO     | will not add max space = 0 B to job metrics
[2026-01-09 04:28:40] 2026-01-09 12:28:08,899 | WARNING  | wrong length of table data, x=[1767961554.0], y=[2242.0] (must be same and length>=4)
[2026-01-09 04:28:40] 2026-01-09 12:28:08,899 | INFO     | could have reported an average CPU frequency of 2706 MHz (4 samples)
[2026-01-09 04:28:40] 2026-01-09 12:28:08,900 | INFO     | ..............................
[2026-01-09 04:28:40] 2026-01-09 12:28:08,900 | INFO     | . Timing measurements:
[2026-01-09 04:28:40] 2026-01-09 12:28:08,900 | INFO     | . get job = 0 s
[2026-01-09 04:28:40] 2026-01-09 12:28:08,900 | INFO     | . initial setup = 2 s
[2026-01-09 04:28:40] 2026-01-09 12:28:08,900 | INFO     | . payload setup = 4 s
[2026-01-09 04:28:40] 2026-01-09 12:28:08,900 | INFO     | . stage-in = 0 s
[2026-01-09 04:28:40] 2026-01-09 12:28:08,900 | INFO     | . payload execution = 15 s
[2026-01-09 04:28:40] 2026-01-09 12:28:08,900 | INFO     | . stage-out = 0 s
[2026-01-09 04:28:40] 2026-01-09 12:28:08,900 | INFO     | . log creation = 0 s
[2026-01-09 04:28:40] 2026-01-09 12:28:08,900 | INFO     | ..............................
[2026-01-09 04:28:40] 2026-01-09 12:28:08,900 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-09 04:28:40] 2026-01-09 12:28:08,900 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963189476/pilotlog.txt
[2026-01-09 04:28:40] [end log extracts]
[2026-01-09 04:28:40] 2026-01-09 12:28:08,911 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-01-09 04:28:40] 2026-01-09 12:28:08,911 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-01-09 04:28:40] 2026-01-09 12:28:08,969 | INFO     | 
[2026-01-09 04:28:40] 2026-01-09 12:28:08,969 | INFO     | job summary report
[2026-01-09 04:28:40] 2026-01-09 12:28:08,969 | INFO     | --------------------------------------------------
[2026-01-09 04:28:40] 2026-01-09 12:28:08,970 | INFO     | PanDA job id: 6963189476
[2026-01-09 04:28:40] 2026-01-09 12:28:08,970 | INFO     | task id: 47898826
[2026-01-09 04:28:40] 2026-01-09 12:28:08,970 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-01-09 04:26:01,203 CRITICAL Transform executor raised TransformValidationExceptio
[2026-01-09 04:28:40] 2026-01-09 12:28:08,970 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 04:28:40] 2026-01-09 12:28:08,970 | INFO     | pilot state: failed 
[2026-01-09 04:28:40] 2026-01-09 12:28:08,970 | INFO     | transexitcode: 65
[2026-01-09 04:28:40] 2026-01-09 12:28:08,970 | INFO     | exeerrorcode: 65
[2026-01-09 04:28:40] 2026-01-09 12:28:08,970 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-01-09 04:28:40] 2026-01-09 12:28:08,970 | INFO     | exitcode: 65
[2026-01-09 04:28:40] 2026-01-09 12:28:08,970 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-01-09 04:28:40] 2026-01-09 12:28:08,970 | INFO     | cpuconsumptiontime: 17 s
[2026-01-09 04:28:40] 2026-01-09 12:28:08,970 | INFO     | nevents: 0
[2026-01-09 04:28:40] 2026-01-09 12:28:08,970 | INFO     | neventsw: 0
[2026-01-09 04:28:40] 2026-01-09 12:28:08,970 | INFO     | pid: 1097590
[2026-01-09 04:28:40] 2026-01-09 12:28:08,970 | INFO     | pgrp: 1097590
[2026-01-09 04:28:40] 2026-01-09 12:28:08,970 | INFO     | corecount: 12
[2026-01-09 04:28:40] 2026-01-09 12:28:08,970 | INFO     | event service: False
[2026-01-09 04:28:40] 2026-01-09 12:28:08,970 | INFO     | sizes: {0: 2283968, 4: 2284230, 11: 2284258, 23: 2307395, 25: 2311715, 144: 2311853}
[2026-01-09 04:28:40] 2026-01-09 12:28:08,970 | INFO     | --------------------------------------------------
[2026-01-09 04:28:40] 2026-01-09 12:28:08,970 | INFO     | 
[2026-01-09 04:28:40] 2026-01-09 12:28:08,971 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-01-09 04:28:40] 2026-01-09 12:28:08,985 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 04:28:40] 2026-01-09 12:28:08,985 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 04:28:40] 2026-01-09 12:28:08,985 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 04:28:40] 2026-01-09 12:28:08,985 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 04:28:40] 2026-01-09 12:28:08,985 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 04:28:40] 2026-01-09 12:28:08,985 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 04:28:40] 2026-01-09 12:28:08,985 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 04:28:40] 2026-01-09 12:28:08,985 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 04:28:40] 2026-01-09 12:28:08,986 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 04:28:40] 2026-01-09 12:28:08,986 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 04:28:40] 2026-01-09 12:28:08,986 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 04:28:40] 2026-01-09 12:28:08,986 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 04:28:40] 2026-01-09 12:28:08,986 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 04:28:40] 2026-01-09 12:28:08,986 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 04:28:40] 2026-01-09 12:28:08,986 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 04:28:40] 2026-01-09 12:28:08,986 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 04:28:40] 2026-01-09 12:28:08,986 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 04:28:40] 2026-01-09 12:28:08,986 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 04:28:40] 2026-01-09 12:28:08,986 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 04:28:40] 2026-01-09 12:28:08,986 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 04:28:40] 2026-01-09 12:28:08,986 | INFO     | job 6963189476 has completed (purged errors)
[2026-01-09 04:28:40] 2026-01-09 12:28:08,986 | INFO     | overall cleanup function is called
[2026-01-09 04:28:40] 2026-01-09 12:28:09,992 | INFO     | --- collectZombieJob: --- 10, [1097590]
[2026-01-09 04:28:40] 2026-01-09 12:28:09,992 | INFO     | zombie collector waiting for pid 1097590
[2026-01-09 04:28:40] 2026-01-09 12:28:09,992 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 04:28:40] 2026-01-09 12:28:09,992 | INFO     | collected zombie processes
[2026-01-09 04:28:40] 2026-01-09 12:28:09,992 | INFO     | will attempt to kill all subprocesses of pid=1097590
[2026-01-09 04:28:40] 2026-01-09 12:28:10,145 | INFO     | process IDs to be killed: [1097590] (in reverse order)
[2026-01-09 04:28:40] 2026-01-09 12:28:10,204 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 04:28:40] 2026-01-09 12:28:10,205 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 04:28:40] 2026-01-09 12:28:10,212 | INFO     | did not find any defunct processes belonging to 1097590
[2026-01-09 04:28:40] 2026-01-09 12:28:10,218 | INFO     | did not find any defunct processes belonging to 1097590
[2026-01-09 04:28:40] 2026-01-09 12:28:10,218 | INFO     | ready for new job
[2026-01-09 04:28:40] 2026-01-09 12:28:10,219 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 04:28:40] 2026-01-09 12:28:10,220 | INFO     | ***************************************
[2026-01-09 04:28:40] 2026-01-09 12:28:10,220 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 04:28:40] 2026-01-09 12:28:10,221 | INFO     | ***************************************
[2026-01-09 04:28:40] 2026-01-09 12:28:10,221 | INFO     | 
[2026-01-09 04:28:40] 2026-01-09 12:28:10,223 | INFO     | architecture information:
[2026-01-09 04:28:40] 2026-01-09 12:28:10,223 | INFO     | executing command: cat /etc/os-release
[2026-01-09 04:28:40] 2026-01-09 12:28:10,234 | INFO     | cat /etc/os-release:
[2026-01-09 04:28:40] NAME="CentOS Linux"
[2026-01-09 04:28:40] VERSION="7 (Core)"
[2026-01-09 04:28:40] ID="centos"
[2026-01-09 04:28:40] ID_LIKE="rhel fedora"
[2026-01-09 04:28:40] VERSION_ID="7"
[2026-01-09 04:28:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 04:28:40] ANSI_COLOR="0;31"
[2026-01-09 04:28:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 04:28:40] HOME_URL="https://www.centos.org/"
[2026-01-09 04:28:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 04:28:40] 
[2026-01-09 04:28:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 04:28:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 04:28:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 04:28:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 04:28:40] 
[2026-01-09 04:28:40] 2026-01-09 12:28:10,235 | INFO     | ***************************************
[2026-01-09 04:28:40] 2026-01-09 12:28:10,737 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-01-09 04:28:40] 2026-01-09 12:28:10,751 | INFO     | sufficient remaining disk space (1926048514048 B)
[2026-01-09 04:28:40] 2026-01-09 12:28:10,751 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 04:28:40] 2026-01-09 12:28:10,751 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 04:28:40] 2026-01-09 12:28:10,752 | INFO     | update_server=False
[2026-01-09 04:28:40] 2026-01-09 12:28:10,752 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 04:28:40] 2026-01-09 12:28:10,752 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 04:28:40] 2026-01-09 12:28:10,752 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 04:28:40] 2026-01-09 12:28:11,005 | INFO     | all job control threads have been joined
[2026-01-09 04:28:40] 2026-01-09 12:28:11,439 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 04:28:40] 2026-01-09 12:28:11,439 | INFO     | aborting loop
[2026-01-09 04:28:40] 2026-01-09 12:28:11,654 | INFO     | all payload control threads have been joined
[2026-01-09 04:28:40] 2026-01-09 12:28:11,757 | INFO     | [job] queue monitor thread has finished
[2026-01-09 04:28:40] 2026-01-09 12:28:11,757 | INFO     | [job] retrieve thread has finished
[2026-01-09 04:28:40] 2026-01-09 12:28:11,833 | INFO     | all data control threads have been joined
[2026-01-09 04:28:40] 2026-01-09 12:28:12,010 | INFO     | [job] control thread has finished
[2026-01-09 04:28:40] 2026-01-09 12:28:12,162 | INFO     | [data] copytool_in thread has finished
[2026-01-09 04:28:40] 2026-01-09 12:28:12,440 | INFO     | [job] job monitor thread has finished
[2026-01-09 04:28:40] 2026-01-09 12:28:12,524 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 04:28:40] 2026-01-09 12:28:12,656 | INFO     | [payload] control thread has finished
[2026-01-09 04:28:40] 2026-01-09 12:28:12,758 | INFO     | [data] copytool_out thread has finished
[2026-01-09 04:28:40] 2026-01-09 12:28:12,807 | INFO     | [payload] failed_post thread has finished
[2026-01-09 04:28:40] 2026-01-09 12:28:12,838 | INFO     | [data] control thread has finished
[2026-01-09 04:28:40] 2026-01-09 12:28:12,881 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 04:28:40] 2026-01-09 12:28:12,889 | INFO     | [job] validate thread has finished
[2026-01-09 04:28:40] 2026-01-09 12:28:13,036 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 04:28:40] 2026-01-09 12:28:13,147 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 04:28:40] 2026-01-09 12:28:13,196 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 04:28:40] 2026-01-09 12:28:13,343 | INFO     | [payload] validate_post thread has finished
[2026-01-09 04:28:40] 2026-01-09 12:28:16,890 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 04:28:40] 2026-01-09 12:28:30,722 | INFO     | [monitor] cgroup control has ended
[2026-01-09 04:28:40] 2026-01-09 12:28:32,485 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140102820665152)>', '<ExcThread(monitor, started 140102151952128)>']
[2026-01-09 04:28:40] 2026-01-09 12:28:37,510 | INFO     | all workflow threads have been joined
[2026-01-09 04:28:40] 2026-01-09 12:28:37,511 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 04:28:40] 2026-01-09 12:28:37,511 | INFO     | traces error code: 0
[2026-01-09 04:28:40] 2026-01-09 12:28:37,511 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 04:28:40] 2026-01-09 12:28:40,563 | INFO     | PID=1091058 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 04:28:40] 2026-01-09 12:28:40,563 | INFO     | .. there are 21 such processes running
[2026-01-09 04:28:40] 2026-01-09 12:28:40,564 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 04:28:40] 2026-01-09 12:28:40,564 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 04:28:40] 2026-01-09 12:28:40,564 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 04:28:40] 2026-01-09 12:28:40,564 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 04:28:40] 2026-01-09 12:28:40,564 | CRITICAL | thread 'MainThread' is not alive
[2026-01-09 04:28:40] 2026-01-09 12:28:40,564 | INFO     | [monitor] control thread has ended
[2026-01-09 04:28:40] 2026-01-09 12:28:40,691 [wrapper] ==== pilot stdout END ====
[2026-01-09 04:28:40] 2026-01-09 12:28:40,693 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 04:28:40] 2026-01-09 12:28:40,695 [wrapper] pilotpid: 1091058
[2026-01-09 04:28:40] 2026-01-09 12:28:40,697 [wrapper] Pilot exit status: 0
[2026-01-09 04:28:40] 2026-01-09 12:28:40,704 [wrapper] pandaids: 6963189476
[2026-01-09 04:28:40] 2026-01-09 12:28:40,742 [wrapper] cleanup supervisor_pilot 1091064 1091059
[2026-01-09 04:28:40] 2026-01-09 12:28:40,744 [wrapper] Test setup, not cleaning
[2026-01-09 04:28:40] 2026-01-09 12:28:40,747 [wrapper] apfmon messages muted
[2026-01-09 04:28:40] 2026-01-09 12:28:40,748 [wrapper] ==== wrapper stdout END ====
[2026-01-09 04:28:40] 2026-01-09 12:28:40,750 [wrapper] ==== wrapper stderr END ====
[2026-01-09 04:28:40]  *** Error codes and diagnostics ***
[2026-01-09 04:28:40]     "exeErrorCode": 65,
[2026-01-09 04:28:40]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-01-09 04:28:40]     "pilotErrorCode": 1305,
[2026-01-09 04:28:40]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-01-09 04:28:40]  *** Listing of results directory ***
[2026-01-09 04:28:40] total 225436
[2026-01-09 04:28:40] -rw-r--r--. 1 boinc boinc    579449 Jan  8 20:21 pilot3.tar.gz
[2026-01-09 04:28:40] -rwx------. 1 boinc boinc     36322 Jan  8 20:25 runpilot2-wrapper.sh
[2026-01-09 04:28:40] -rw-r--r--. 1 boinc boinc      5112 Jan  8 20:30 queuedata.json
[2026-01-09 04:28:40] -rw-r--r--. 1 boinc boinc       100 Jan  9 04:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 04:28:40] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 04:25 run_atlas
[2026-01-09 04:28:40] -rw-r--r--. 1 boinc boinc       105 Jan  9 04:25 job.xml
[2026-01-09 04:28:40] -rw-r--r--. 1 boinc boinc      6595 Jan  9 04:25 init_data.xml
[2026-01-09 04:28:40] -rw-r--r--. 2 boinc boinc 226730526 Jan  9 04:25 EVNT.47898824._001472.pool.root.1
[2026-01-09 04:28:40] -rw-r--r--. 2 boinc boinc     15847 Jan  9 04:25 start_atlas.sh
[2026-01-09 04:28:40] drwxrwx--x. 2 boinc boinc      4096 Jan  9 04:25 shared
[2026-01-09 04:28:40] -rw-r--r--. 2 boinc boinc    592402 Jan  9 04:25 input.tar.gz
[2026-01-09 04:28:40] -rw-r--r--. 1 boinc boinc         0 Jan  9 04:25 boinc_lockfile
[2026-01-09 04:28:40] -rw-r--r--. 1 boinc boinc      2520 Jan  9 04:25 pandaJob.out
[2026-01-09 04:28:40] -rw-------. 1 boinc boinc    989377 Jan  9 04:25 agis_schedconf.cvmfs.json
[2026-01-09 04:28:40] -rw-------. 1 boinc boinc   1516240 Jan  9 04:25 agis_ddmendpoints.agis.ALL.json
[2026-01-09 04:28:40] drwx------. 5 boinc boinc      4096 Jan  9 04:25 pilot3
[2026-01-09 04:28:40] -rw-r--r--. 1 boinc boinc       523 Jan  9 04:25 boinc_task_state.xml
[2026-01-09 04:28:40] -rw-------. 1 boinc boinc       952 Jan  9 04:26 memory_monitor_summary.json
[2026-01-09 04:28:40] -rw-------. 1 boinc boinc     20640 Jan  9 04:26 log.47898826._038345.job.log.tgz.1
[2026-01-09 04:28:40] -rw-------. 1 boinc boinc      8379 Jan  9 04:28 heartbeat.json
[2026-01-09 04:28:40] -rw-r--r--. 1 boinc boinc        22 Jan  9 04:28 wrapper_checkpoint.txt
[2026-01-09 04:28:40] -rw-r--r--. 1 boinc boinc      8192 Jan  9 04:28 boinc_mmap_file
[2026-01-09 04:28:40] -rw-------. 1 boinc boinc        95 Jan  9 04:28 pilot_heartbeat.json
[2026-01-09 04:28:40] -rw-------. 1 boinc boinc       893 Jan  9 04:28 pilotlog.txt
[2026-01-09 04:28:40] -rw-------. 1 boinc boinc     81454 Jan  9 04:28 log.47898826._038345.job.log.1
[2026-01-09 04:28:40] -rw-------. 1 boinc boinc       188 Jan  9 04:28 output.list
[2026-01-09 04:28:40] -rw-r--r--. 1 boinc boinc       620 Jan  9 04:28 runtime_log
[2026-01-09 04:28:40] -rw-------. 1 boinc boinc    122880 Jan  9 04:28 result.tar.gz
[2026-01-09 04:28:40] -rw-r--r--. 1 boinc boinc      8636 Jan  9 04:28 runtime_log.err
[2026-01-09 04:28:40] -rw-------. 1 boinc boinc       645 Jan  9 04:28 jA8KDmMFJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmNMmKDmy627um.diag
[2026-01-09 04:28:40] -rw-r--r--. 1 boinc boinc     21614 Jan  9 04:28 stderr.txt
[2026-01-09 04:28:40] No HITS result produced
[2026-01-09 04:28:40]  *** Contents of shared directory: ***
[2026-01-09 04:28:40] total 222140
[2026-01-09 04:28:40] -rw-r--r--. 2 boinc boinc 226730526 Jan  9 04:25 ATLAS.root_0
[2026-01-09 04:28:40] -rw-r--r--. 2 boinc boinc     15847 Jan  9 04:25 start_atlas.sh
[2026-01-09 04:28:40] -rw-r--r--. 2 boinc boinc    592402 Jan  9 04:25 input.tar.gz
[2026-01-09 04:28:40] -rw-------. 1 boinc boinc    122880 Jan  9 04:28 result.tar.gz
04:28:41 (1087400): run_atlas exited; CPU time 20.911945
04:28:41 (1087400): called boinc_finish(0)

</stderr_txt>
]]>

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