Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:31:59 (1398306): wrapper (7.7.26015): starting
09:31:59 (1398306): wrapper: running run_atlas (--nthreads 9)
[2026-01-09 09:31:59] Arguments: --nthreads 9
[2026-01-09 09:31:59] Threads: 9
[2026-01-09 09:31:59] Checking for CVMFS
[2026-01-09 09:31:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 09:32:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 09:32:00] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 09:32:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 09:32:02] 2.13.3.0 15551 91832 357272 154946 1 105 20233503 32935937 11543 16776704 0 205961611 99.403 328545275 40527 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 09:32:02] CVMFS is ok
[2026-01-09 09:32:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 09:32:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 09:32:02] Further information can be found at the LHC@home message board.
[2026-01-09 09:32:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 09:32:02] Checking for apptainer binary...
[2026-01-09 09:32:02] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 09:32:02] Running /usr/bin/apptainer --version
[2026-01-09 09:32:02] apptainer version 1.4.5-2.el9
[2026-01-09 09:32:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 09:32:03] c6-5-7-3.aglt2.org
[2026-01-09 09:32:03] apptainer works
[2026-01-09 09:32:03] Set ATHENA_PROC_NUMBER=9
[2026-01-09 09:32:03] Set ATHENA_CORE_NUMBER=9
[2026-01-09 09:32:03] Starting ATLAS job with PandaID=6963189389
[2026-01-09 09:32:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 14:43:01]  *** The last 200 lines of the pilot log: ***
[2026-01-09 14:43:01] 2026-01-09 19:42:20,995 | INFO     | monitor loop #1267: job 0:6963189389 is in state 'finished'
[2026-01-09 14:43:01] 2026-01-09 19:42:20,995 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 14:43:01] 2026-01-09 19:42:21,785 | INFO     | time since job start (18538s) is within the limit (349056.0s)
[2026-01-09 14:43:01] 2026-01-09 19:42:23,500 | INFO     | monitor loop #1268: job 0:6963189389 is in state 'finished'
[2026-01-09 14:43:01] 2026-01-09 19:42:23,501 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 14:43:01] 2026-01-09 19:42:23,794 | INFO     | time since job start (18540s) is within the limit (349056.0s)
[2026-01-09 14:43:01] 2026-01-09 19:42:25,179 | INFO     | PID=1405115 has CPU usage=10.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-09 14:43:01] 2026-01-09 19:42:25,179 | INFO     | .. there are 10 such processes running
[2026-01-09 14:43:01] 2026-01-09 19:42:25,942 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 14:43:01] 2026-01-09 19:42:25,951 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3005.929928571429
[2026-01-09 14:43:01] 2026-01-09 19:42:25,962 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963189389/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 14:43:01] 2026-01-09 19:42:25,963 | INFO     | extracted standard info from prmon json
[2026-01-09 14:43:01] 2026-01-09 19:42:25,963 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 14:43:01] 2026-01-09 19:42:25,963 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 14:43:01] 2026-01-09 19:42:25,964 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 14:43:01] 2026-01-09 19:42:25,964 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 14:43:01] 2026-01-09 19:42:25,970 | INFO     | fitting pss+swap vs Time
[2026-01-09 14:43:01] 2026-01-09 19:42:25,971 | INFO     | sum of square deviations: 8455905925.5681
[2026-01-09 14:43:01] 2026-01-09 19:42:25,973 | INFO     | sum of deviations: 64744579373.073074
[2026-01-09 14:43:01] 2026-01-09 19:42:25,973 | INFO     | mean x: 1767978534.1461794
[2026-01-09 14:43:01] 2026-01-09 19:42:25,974 | INFO     | mean y: 2549856.4983388702
[2026-01-09 14:43:01] 2026-01-09 19:42:25,974 | INFO     | intersect: -13534382500.779083
[2026-01-09 14:43:01] 2026-01-09 19:42:25,974 | INFO     | chi2: 3.555608453096203
[2026-01-09 14:43:01] 2026-01-09 19:42:25,975 | INFO     | sum of square deviations: 8041474365.459465
[2026-01-09 14:43:01] 2026-01-09 19:42:25,977 | INFO     | sum of deviations: 82673893016.62169
[2026-01-09 14:43:01] 2026-01-09 19:42:25,977 | INFO     | mean x: 1767978381.6486487
[2026-01-09 14:43:01] 2026-01-09 19:42:25,978 | INFO     | mean y: 2556357.179054054
[2026-01-09 14:43:01] 2026-01-09 19:42:25,978 | INFO     | intersect: -18173918370.88145
[2026-01-09 14:43:01] 2026-01-09 19:42:25,978 | INFO     | chi2: 2.878480707327965
[2026-01-09 14:43:01] 2026-01-09 19:42:25,978 | INFO     | current chi2=2.878480707327965 (change=19.043934524865904 %)
[2026-01-09 14:43:01] 2026-01-09 19:42:25,978 | INFO     | right removable region: 295
[2026-01-09 14:43:01] 2026-01-09 19:42:25,979 | INFO     | sum of square deviations: 8041465641.753395
[2026-01-09 14:43:01] 2026-01-09 19:42:25,981 | INFO     | sum of deviations: -13417691194.733107
[2026-01-09 14:43:01] 2026-01-09 19:42:25,982 | INFO     | mean x: 1767978686.6452703
[2026-01-09 14:43:01] 2026-01-09 19:42:25,982 | INFO     | mean y: 2578538.7263513515
[2026-01-09 14:43:01] 2026-01-09 19:42:25,982 | INFO     | intersect: 2952562175.1799116
[2026-01-09 14:43:01] 2026-01-09 19:42:25,982 | INFO     | chi2: 1.0344513841084657
[2026-01-09 14:43:01] 2026-01-09 19:42:25,982 | INFO     | current chi2=1.0344513841084657 (change=70.90648765873893 %)
[2026-01-09 14:43:01] 2026-01-09 19:42:25,983 | INFO     | sum of square deviations: 7640847711.7732115
[2026-01-09 14:43:01] 2026-01-09 19:42:25,985 | INFO     | sum of deviations: -31004342277.319588
[2026-01-09 14:43:01] 2026-01-09 19:42:25,986 | INFO     | mean x: 1767978839.1340206
[2026-01-09 14:43:01] 2026-01-09 19:42:25,986 | INFO     | mean y: 2585218.264604811
[2026-01-09 14:43:01] 2026-01-09 19:42:25,986 | INFO     | intersect: 7176530196.006925
[2026-01-09 14:43:01] 2026-01-09 19:42:25,986 | INFO     | chi2: 0.9017196218704668
[2026-01-09 14:43:01] 2026-01-09 19:42:25,986 | INFO     | current chi2=0.9017196218704668 (change=12.831126167653858 %)
[2026-01-09 14:43:01] 2026-01-09 19:42:25,986 | INFO     | left removable region: 20
[2026-01-09 14:43:01] 2026-01-09 19:42:25,987 | INFO     | sum of square deviations: 6448516578.021837
[2026-01-09 14:43:01] 2026-01-09 19:42:25,989 | INFO     | sum of deviations: -9840777399.600006
[2026-01-09 14:43:01] 2026-01-09 19:42:25,989 | INFO     | mean x: 1767978961.1345456
[2026-01-09 14:43:01] 2026-01-09 19:42:25,989 | INFO     | mean y: 2591487.8
[2026-01-09 14:43:01] 2026-01-09 19:42:25,990 | INFO     | intersect: 2700620901.727362
[2026-01-09 14:43:01] 2026-01-09 19:42:25,990 | INFO     | chi2: 0.17005291740122194
[2026-01-09 14:43:01] 2026-01-09 19:42:25,990 | INFO     | current memory leak: -1.53 B/s (using 275 data points, chi2=0.17)
[2026-01-09 14:43:01] 2026-01-09 19:42:25,991 | INFO     | could have reported an average CPU frequency of 3007 MHz (14 samples)
[2026-01-09 14:43:01] 2026-01-09 19:42:25,991 | INFO     | ..............................
[2026-01-09 14:43:01] 2026-01-09 19:42:25,991 | INFO     | . Timing measurements:
[2026-01-09 14:43:01] 2026-01-09 19:42:25,991 | INFO     | . get job = 0 s
[2026-01-09 14:43:01] 2026-01-09 19:42:25,991 | INFO     | . initial setup = 6 s
[2026-01-09 14:43:01] 2026-01-09 19:42:25,991 | INFO     | . payload setup = 63 s
[2026-01-09 14:43:01] 2026-01-09 19:42:25,991 | INFO     | . stage-in = 0 s
[2026-01-09 14:43:01] 2026-01-09 19:42:25,991 | INFO     | . payload execution = 18379 s
[2026-01-09 14:43:01] 2026-01-09 19:42:25,992 | INFO     | . stage-out = 2 s
[2026-01-09 14:43:01] 2026-01-09 19:42:25,992 | INFO     | . log creation = 0 s
[2026-01-09 14:43:01] 2026-01-09 19:42:25,992 | INFO     | ..............................
[2026-01-09 14:43:01] 2026-01-09 19:42:26,180 | INFO     | time since job start (18543s) is within the limit (349056.0s)
[2026-01-09 14:43:01] 2026-01-09 19:42:26,258 | INFO     | 
[2026-01-09 14:43:01] 2026-01-09 19:42:26,258 | INFO     | job summary report
[2026-01-09 14:43:01] 2026-01-09 19:42:26,258 | INFO     | --------------------------------------------------
[2026-01-09 14:43:01] 2026-01-09 19:42:26,258 | INFO     | PanDA job id: 6963189389
[2026-01-09 14:43:01] 2026-01-09 19:42:26,258 | INFO     | task id: 47898826
[2026-01-09 14:43:01] 2026-01-09 19:42:26,258 | INFO     | errors: (none)
[2026-01-09 14:43:01] 2026-01-09 19:42:26,258 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 14:43:01] 2026-01-09 19:42:26,259 | INFO     | pilot state: finished 
[2026-01-09 14:43:01] 2026-01-09 19:42:26,259 | INFO     | transexitcode: 0
[2026-01-09 14:43:01] 2026-01-09 19:42:26,259 | INFO     | exeerrorcode: 0
[2026-01-09 14:43:01] 2026-01-09 19:42:26,259 | INFO     | exeerrordiag: 
[2026-01-09 14:43:01] 2026-01-09 19:42:26,259 | INFO     | exitcode: 0
[2026-01-09 14:43:01] 2026-01-09 19:42:26,259 | INFO     | exitmsg: OK
[2026-01-09 14:43:01] 2026-01-09 19:42:26,259 | INFO     | cpuconsumptiontime: 54928 s
[2026-01-09 14:43:01] 2026-01-09 19:42:26,259 | INFO     | nevents: 400
[2026-01-09 14:43:01] 2026-01-09 19:42:26,259 | INFO     | neventsw: 0
[2026-01-09 14:43:01] 2026-01-09 19:42:26,259 | INFO     | pid: 1413891
[2026-01-09 14:43:01] 2026-01-09 19:42:26,259 | INFO     | pgrp: 1413891
[2026-01-09 14:43:01] 2026-01-09 19:42:26,259 | INFO     | corecount: 9
[2026-01-09 14:43:01] 2026-01-09 19:42:26,259 | INFO     | event service: False
[2026-01-09 14:43:01] 2026-01-09 19:42:26,259 | INFO     | sizes: {0: 2283800, 1: 2283828, 2: 2283999, 12: 2284027, 24: 2284055, 35: 2284083, 40: 2284501, 46: 2284529, 18446: 2317466, 18449: 2326464, 18451: 2326520, 18462:
[2026-01-09 14:43:01] 2026-01-09 19:42:26,259 | INFO     | --------------------------------------------------
[2026-01-09 14:43:01] 2026-01-09 19:42:26,260 | INFO     | 
[2026-01-09 14:43:01] 2026-01-09 19:42:26,260 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-09 14:43:01] 2026-01-09 19:42:26,289 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 14:43:01] 2026-01-09 19:42:26,290 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 14:43:01] 2026-01-09 19:42:26,290 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 14:43:01] 2026-01-09 19:42:26,290 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 14:43:01] 2026-01-09 19:42:26,290 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 14:43:01] 2026-01-09 19:42:26,290 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 14:43:01] 2026-01-09 19:42:26,290 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 14:43:01] 2026-01-09 19:42:26,290 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 14:43:01] 2026-01-09 19:42:26,290 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 14:43:01] 2026-01-09 19:42:26,290 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 14:43:01] 2026-01-09 19:42:26,290 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 14:43:01] 2026-01-09 19:42:26,290 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 14:43:01] 2026-01-09 19:42:26,290 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 14:43:01] 2026-01-09 19:42:26,291 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 14:43:01] 2026-01-09 19:42:26,291 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 14:43:01] 2026-01-09 19:42:26,291 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 14:43:01] 2026-01-09 19:42:26,291 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 14:43:01] 2026-01-09 19:42:26,291 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 14:43:01] 2026-01-09 19:42:26,291 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 14:43:01] 2026-01-09 19:42:26,291 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 14:43:01] 2026-01-09 19:42:26,291 | INFO     | job 6963189389 has completed (purged errors)
[2026-01-09 14:43:01] 2026-01-09 19:42:26,291 | INFO     | overall cleanup function is called
[2026-01-09 14:43:01] 2026-01-09 19:42:27,301 | INFO     | --- collectZombieJob: --- 10, [1413891]
[2026-01-09 14:43:01] 2026-01-09 19:42:27,301 | INFO     | zombie collector waiting for pid 1413891
[2026-01-09 14:43:01] 2026-01-09 19:42:27,301 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 14:43:01] 2026-01-09 19:42:27,301 | INFO     | collected zombie processes
[2026-01-09 14:43:01] 2026-01-09 19:42:27,301 | INFO     | will attempt to kill all subprocesses of pid=1413891
[2026-01-09 14:43:01] 2026-01-09 19:42:27,824 | INFO     | process IDs to be killed: [1413891] (in reverse order)
[2026-01-09 14:43:01] 2026-01-09 19:42:27,977 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 14:43:01] 2026-01-09 19:42:27,977 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 14:43:01] 2026-01-09 19:42:28,039 | INFO     | did not find any defunct processes belonging to 1413891
[2026-01-09 14:43:01] 2026-01-09 19:42:28,074 | INFO     | did not find any defunct processes belonging to 1413891
[2026-01-09 14:43:01] 2026-01-09 19:42:28,074 | INFO     | ready for new job
[2026-01-09 14:43:01] 2026-01-09 19:42:28,074 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 14:43:01] 2026-01-09 19:42:28,088 | INFO     | ***************************************
[2026-01-09 14:43:01] 2026-01-09 19:42:28,088 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 14:43:01] 2026-01-09 19:42:28,088 | INFO     | ***************************************
[2026-01-09 14:43:01] 2026-01-09 19:42:28,088 | INFO     | 
[2026-01-09 14:43:01] 2026-01-09 19:42:28,091 | INFO     | architecture information:
[2026-01-09 14:43:01] 2026-01-09 19:42:28,091 | INFO     | executing command: cat /etc/os-release
[2026-01-09 14:43:01] 2026-01-09 19:42:28,195 | INFO     | cat /etc/os-release:
[2026-01-09 14:43:01] NAME="CentOS Linux"
[2026-01-09 14:43:01] VERSION="7 (Core)"
[2026-01-09 14:43:01] ID="centos"
[2026-01-09 14:43:01] ID_LIKE="rhel fedora"
[2026-01-09 14:43:01] VERSION_ID="7"
[2026-01-09 14:43:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 14:43:01] ANSI_COLOR="0;31"
[2026-01-09 14:43:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 14:43:01] HOME_URL="https://www.centos.org/"
[2026-01-09 14:43:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 14:43:01] 
[2026-01-09 14:43:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 14:43:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 14:43:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 14:43:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 14:43:01] 
[2026-01-09 14:43:01] 2026-01-09 19:42:28,195 | INFO     | ***************************************
[2026-01-09 14:43:01] 2026-01-09 19:42:28,709 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-09 14:43:01] 2026-01-09 19:42:28,728 | INFO     | sufficient remaining disk space (75209113600 B)
[2026-01-09 14:43:01] 2026-01-09 19:42:28,728 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 14:43:01] 2026-01-09 19:42:28,728 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 14:43:01] 2026-01-09 19:42:28,728 | INFO     | update_server=False
[2026-01-09 14:43:01] 2026-01-09 19:42:28,728 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 14:43:01] 2026-01-09 19:42:29,067 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 14:43:01] 2026-01-09 19:42:29,086 | INFO     | all job control threads have been joined
[2026-01-09 14:43:01] 2026-01-09 19:42:29,531 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 14:43:01] 2026-01-09 19:42:29,531 | INFO     | aborting loop
[2026-01-09 14:43:01] 2026-01-09 19:42:29,687 | INFO     | all data control threads have been joined
[2026-01-09 14:43:01] 2026-01-09 19:42:29,709 | INFO     | all payload control threads have been joined
[2026-01-09 14:43:01] 2026-01-09 19:42:29,734 | INFO     | [job] retrieve thread has finished
[2026-01-09 14:43:01] 2026-01-09 19:42:29,885 | INFO     | [job] validate thread has finished
[2026-01-09 14:43:01] 2026-01-09 19:42:29,894 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 14:43:01] 2026-01-09 19:42:30,092 | INFO     | [job] control thread has finished
[2026-01-09 14:43:01] 2026-01-09 19:42:30,467 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 14:43:01] 2026-01-09 19:42:30,501 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 14:43:01] 2026-01-09 19:42:30,513 | INFO     | [payload] failed_post thread has finished
[2026-01-09 14:43:01] 2026-01-09 19:42:30,537 | INFO     | [job] job monitor thread has finished
[2026-01-09 14:43:01] 2026-01-09 19:42:30,647 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 14:43:01] 2026-01-09 19:42:30,693 | INFO     | [data] control thread has finished
[2026-01-09 14:43:01] 2026-01-09 19:42:30,716 | INFO     | [payload] control thread has finished
[2026-01-09 14:43:01] 2026-01-09 19:42:30,943 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 14:43:01] 2026-01-09 19:42:30,943 | INFO     | [data] copytool_in thread has finished
[2026-01-09 14:43:01] 2026-01-09 19:42:30,992 | INFO     | [payload] validate_post thread has finished
[2026-01-09 14:43:01] 2026-01-09 19:42:31,075 | INFO     | [data] copytool_out thread has finished
[2026-01-09 14:43:01] 2026-01-09 19:42:31,089 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 14:43:01] 2026-01-09 19:42:32,094 | INFO     | [job] queue monitor thread has finished
[2026-01-09 14:43:01] 2026-01-09 19:42:34,660 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 14:43:01] 2026-01-09 19:42:53,961 | INFO     | [monitor] cgroup control has ended
[2026-01-09 14:43:01] 2026-01-09 19:42:55,720 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139952425662272)>', '<ExcThread(monitor, started 139952079746816)>']
[2026-01-09 14:43:01] 2026-01-09 19:42:59,615 | INFO     | PID=1405115 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 14:43:01] 2026-01-09 19:42:59,616 | INFO     | .. there are 10 such processes running
[2026-01-09 14:43:01] 2026-01-09 19:42:59,616 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 14:43:01] 2026-01-09 19:42:59,617 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 14:43:01] 2026-01-09 19:42:59,617 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 14:43:01] 2026-01-09 19:42:59,617 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 14:43:01] 2026-01-09 19:42:59,617 | INFO     | [monitor] control thread has ended
[2026-01-09 14:43:01] 2026-01-09 19:43:00,746 | INFO     | all workflow threads have been joined
[2026-01-09 14:43:01] 2026-01-09 19:43:00,746 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 14:43:01] 2026-01-09 19:43:00,746 | INFO     | traces error code: 0
[2026-01-09 14:43:01] 2026-01-09 19:43:00,746 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 14:43:01] 2026-01-09 19:43:00,881 [wrapper] ==== pilot stdout END ====
[2026-01-09 14:43:01] 2026-01-09 19:43:00,883 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 14:43:01] 2026-01-09 19:43:00,885 [wrapper] pilotpid: 1405115
[2026-01-09 14:43:01] 2026-01-09 19:43:00,887 [wrapper] Pilot exit status: 0
[2026-01-09 14:43:01] 2026-01-09 19:43:00,896 [wrapper] pandaids: 6963189389
[2026-01-09 14:43:01] 2026-01-09 19:43:00,981 [wrapper] cleanup supervisor_pilot 2081978 1405116
[2026-01-09 14:43:01] 2026-01-09 19:43:00,993 [wrapper] Test setup, not cleaning
[2026-01-09 14:43:01] 2026-01-09 19:43:01,015 [wrapper] apfmon messages muted
[2026-01-09 14:43:01] 2026-01-09 19:43:01,031 [wrapper] ==== wrapper stdout END ====
[2026-01-09 14:43:01] 2026-01-09 19:43:01,034 [wrapper] ==== wrapper stderr END ====
[2026-01-09 14:43:01]  *** Error codes and diagnostics ***
[2026-01-09 14:43:01]     "exeErrorCode": 0,
[2026-01-09 14:43:01]     "exeErrorDiag": "",
[2026-01-09 14:43:01]     "pilotErrorCode": 0,
[2026-01-09 14:43:01]     "pilotErrorDiag": "",
[2026-01-09 14:43:01]  *** Listing of results directory ***
[2026-01-09 14:43:01] total 454072
[2026-01-09 14:43:01] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-09 14:43:01] -rwx------. 1 boincer umatlas     36322 Jan  8 23:25 runpilot2-wrapper.sh
[2026-01-09 14:43:01] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 23:30 queuedata.json
[2026-01-09 14:43:01] -rw-r--r--. 1 boincer umatlas       100 Jan  9 09:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 14:43:01] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 09:31 run_atlas
[2026-01-09 14:43:01] -rw-r--r--. 1 boincer umatlas       105 Jan  9 09:31 job.xml
[2026-01-09 14:43:01] -rw-r--r--. 2 boincer umatlas 225588989 Jan  9 09:31 EVNT.47898824._001469.pool.root.1
[2026-01-09 14:43:01] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 09:31 start_atlas.sh
[2026-01-09 14:43:01] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 09:31 shared
[2026-01-09 14:43:01] -rw-r--r--. 2 boincer umatlas    592401 Jan  9 09:31 input.tar.gz
[2026-01-09 14:43:01] -rw-r--r--. 1 boincer umatlas         0 Jan  9 09:31 boinc_lockfile
[2026-01-09 14:43:01] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 09:32 pandaJob.out
[2026-01-09 14:43:01] -rw-------. 1 boincer umatlas        57 Jan  9 09:32 setup.sh.local
[2026-01-09 14:43:01] -rw-------. 1 boincer umatlas    989377 Jan  9 09:33 agis_schedconf.cvmfs.json
[2026-01-09 14:43:01] drwx------. 5 boincer umatlas      4096 Jan  9 09:33 pilot3
[2026-01-09 14:43:01] -rw-r--r--. 1 boincer umatlas      6843 Jan  9 14:37 init_data.xml
[2026-01-09 14:43:01] -rw-------. 1 boincer umatlas 229390945 Jan  9 14:41 HITS.47898826._038271.pool.root.1
[2026-01-09 14:43:01] -rw-r--r--. 1 boincer umatlas       531 Jan  9 14:41 boinc_task_state.xml
[2026-01-09 14:43:01] -rw-------. 1 boincer umatlas      1040 Jan  9 14:42 memory_monitor_summary.json
[2026-01-09 14:43:01] -rw-------. 1 boincer umatlas   1516240 Jan  9 14:42 agis_ddmendpoints.agis.ALL.json
[2026-01-09 14:43:01] -rw-------. 1 boincer umatlas    546277 Jan  9 14:42 log.47898826._038271.job.log.tgz.1
[2026-01-09 14:43:01] -rw-------. 1 boincer umatlas      7826 Jan  9 14:42 heartbeat.json
[2026-01-09 14:43:01] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 14:42 boinc_mmap_file
[2026-01-09 14:43:01] -rw-r--r--. 1 boincer umatlas        28 Jan  9 14:42 wrapper_checkpoint.txt
[2026-01-09 14:43:01] -rw-------. 1 boincer umatlas        95 Jan  9 14:42 pilot_heartbeat.json
[2026-01-09 14:43:01] -rw-------. 1 boincer umatlas      4824 Jan  9 14:43 pilotlog.txt
[2026-01-09 14:43:01] -rw-------. 1 boincer umatlas   2490401 Jan  9 14:43 log.47898826._038271.job.log.1
[2026-01-09 14:43:01] -rw-------. 1 boincer umatlas       357 Jan  9 14:43 output.list
[2026-01-09 14:43:01] -rw-r--r--. 1 boincer umatlas       620 Jan  9 14:43 runtime_log
[2026-01-09 14:43:01] -rw-------. 1 boincer umatlas   3051520 Jan  9 14:43 result.tar.gz
[2026-01-09 14:43:01] -rw-------. 1 boincer umatlas       656 Jan  9 14:43 x5dKDmMFJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm6LmKDm7PMXHm.diag
[2026-01-09 14:43:01] -rw-r--r--. 1 boincer umatlas      9343 Jan  9 14:43 runtime_log.err
[2026-01-09 14:43:01] -rw-r--r--. 1 boincer umatlas     21514 Jan  9 14:43 stderr.txt
[2026-01-09 14:43:01] HITS file was successfully produced:
[2026-01-09 14:43:01] -rw-------. 1 boincer umatlas 229390945 Jan  9 14:41 shared/HITS.pool.root.1
[2026-01-09 14:43:01]  *** Contents of shared directory: ***
[2026-01-09 14:43:01] total 447904
[2026-01-09 14:43:01] -rw-r--r--. 2 boincer umatlas 225588989 Jan  9 09:31 ATLAS.root_0
[2026-01-09 14:43:01] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 09:31 start_atlas.sh
[2026-01-09 14:43:01] -rw-r--r--. 2 boincer umatlas    592401 Jan  9 09:31 input.tar.gz
[2026-01-09 14:43:01] -rw-------. 1 boincer umatlas 229390945 Jan  9 14:41 HITS.pool.root.1
[2026-01-09 14:43:01] -rw-------. 1 boincer umatlas   3051520 Jan  9 14:43 result.tar.gz
14:43:02 (1398306): run_atlas exited; CPU time 55357.228102
14:43:02 (1398306): called boinc_finish(0)

</stderr_txt>
]]>

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