Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:26:53 (2111046): wrapper (7.7.26015): starting
07:26:53 (2111046): wrapper: running run_atlas (--nthreads 9)
[2026-01-09 07:26:53] Arguments: --nthreads 9
[2026-01-09 07:26:53] Threads: 9
[2026-01-09 07:26:53] Checking for CVMFS
[2026-01-09 07:26:54] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 07:26:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 07:26:55] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 07:26:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 07:26:56] 2.13.3.0 15513 93356 721528 154942 2 576 36273776 40960001 42675 16776704 0 810252330 99.831 350555677 31527 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 07:26:56] CVMFS is ok
[2026-01-09 07:26:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 07:26:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 07:26:56] Further information can be found at the LHC@home message board.
[2026-01-09 07:26:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 07:26:56] Checking for apptainer binary...
[2026-01-09 07:26:56] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 07:26:56] Running /usr/bin/apptainer --version
[2026-01-09 07:26:56] apptainer version 1.4.5-2.el9
[2026-01-09 07:26:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 07:26:57] c-1-1.aglt2.org
[2026-01-09 07:26:57] apptainer works
[2026-01-09 07:26:57] Set ATHENA_PROC_NUMBER=9
[2026-01-09 07:26:57] Set ATHENA_CORE_NUMBER=9
[2026-01-09 07:26:57] Starting ATLAS job with PandaID=6963189385
[2026-01-09 07:26:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 13:04:33]  *** The last 200 lines of the pilot log: ***
[2026-01-09 13:04:33] 2026-01-09 18:03:35,520 | INFO     | found 40 cores (20 cores per socket, 2 sockets) HT, CPU MHz: 2977.3149999999996
[2026-01-09 13:04:33] 2026-01-09 18:03:35,664 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6963189385/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 13:04:33] 2026-01-09 18:03:35,665 | INFO     | extracted standard info from prmon json
[2026-01-09 13:04:33] 2026-01-09 18:03:35,665 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 13:04:33] 2026-01-09 18:03:35,665 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 13:04:33] 2026-01-09 18:03:35,805 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 13:04:33] 2026-01-09 18:03:35,871 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 13:04:33] 2026-01-09 18:03:35,886 | INFO     | fitting pss+swap vs Time
[2026-01-09 13:04:33] 2026-01-09 18:03:35,987 | INFO     | sum of square deviations: 10841703215.382261
[2026-01-09 13:04:33] 2026-01-09 18:03:35,990 | INFO     | sum of deviations: 87528839257.92064
[2026-01-09 13:04:33] 2026-01-09 18:03:35,991 | INFO     | mean x: 1767971812.262997
[2026-01-09 13:04:33] 2026-01-09 18:03:36,040 | INFO     | mean y: 2524215.489296636
[2026-01-09 13:04:33] 2026-01-09 18:03:36,040 | INFO     | intersect: -14270926873.685007
[2026-01-09 13:04:33] 2026-01-09 18:03:36,041 | INFO     | chi2: 5.292964654247263
[2026-01-09 13:04:33] 2026-01-09 18:03:36,042 | INFO     | sum of square deviations: 10351943517.531118
[2026-01-09 13:04:33] 2026-01-09 18:03:36,089 | INFO     | sum of deviations: 130108220785.13057
[2026-01-09 13:04:33] 2026-01-09 18:03:36,089 | INFO     | mean x: 1767971659.7670808
[2026-01-09 13:04:33] 2026-01-09 18:03:36,089 | INFO     | mean y: 2537347.5217391304
[2026-01-09 13:04:33] 2026-01-09 18:03:36,089 | INFO     | intersect: -22218183492.12301
[2026-01-09 13:04:33] 2026-01-09 18:03:36,090 | INFO     | chi2: 3.7865360673579778
[2026-01-09 13:04:33] 2026-01-09 18:03:36,090 | INFO     | current chi2=3.7865360673579778 (change=28.460960639147164 %)
[2026-01-09 13:04:33] 2026-01-09 18:03:36,090 | INFO     | sum of square deviations: 9877141202.208214
[2026-01-09 13:04:33] 2026-01-09 18:03:36,134 | INFO     | sum of deviations: 127831704436.33127
[2026-01-09 13:04:33] 2026-01-09 18:03:36,135 | INFO     | mean x: 1767971507.268139
[2026-01-09 13:04:33] 2026-01-09 18:03:36,135 | INFO     | mean y: 2536616.2902208203
[2026-01-09 13:04:33] 2026-01-09 18:03:36,135 | INFO     | intersect: -22878862620.811787
[2026-01-09 13:04:33] 2026-01-09 18:03:36,135 | INFO     | chi2: 3.7883288397354224
[2026-01-09 13:04:33] 2026-01-09 18:03:36,136 | INFO     | current chi2=3.7883288397354224 (change=-0.04734597388096651 %)
[2026-01-09 13:04:33] 2026-01-09 18:03:36,136 | INFO     | right removable region: 316
[2026-01-09 13:04:33] 2026-01-09 18:03:36,136 | INFO     | sum of square deviations: 10351891057.531115
[2026-01-09 13:04:33] 2026-01-09 18:03:36,182 | INFO     | sum of deviations: -12582207816.332306
[2026-01-09 13:04:33] 2026-01-09 18:03:36,183 | INFO     | mean x: 1767971964.7670808
[2026-01-09 13:04:33] 2026-01-09 18:03:36,183 | INFO     | mean y: 2555333.7422360247
[2026-01-09 13:04:33] 2026-01-09 18:03:36,183 | INFO     | intersect: 2151437170.9371195
[2026-01-09 13:04:33] 2026-01-09 18:03:36,183 | INFO     | chi2: 1.8967379240950382
[2026-01-09 13:04:33] 2026-01-09 18:03:36,194 | INFO     | current chi2=1.8967379240950382 (change=64.16492366762684 %)
[2026-01-09 13:04:33] 2026-01-09 18:03:36,194 | INFO     | sum of square deviations: 9877094841.741247
[2026-01-09 13:04:33] 2026-01-09 18:03:36,213 | INFO     | sum of deviations: -39782813216.70978
[2026-01-09 13:04:33] 2026-01-09 18:03:36,213 | INFO     | mean x: 1767972117.2649841
[2026-01-09 13:04:33] 2026-01-09 18:03:36,213 | INFO     | mean y: 2564053.044164038
[2026-01-09 13:04:33] 2026-01-09 18:03:36,213 | INFO     | intersect: 7123575407.138273
[2026-01-09 13:04:33] 2026-01-09 18:03:36,213 | INFO     | chi2: 1.6457499576201349
[2026-01-09 13:04:33] 2026-01-09 18:03:36,214 | INFO     | current chi2=1.6457499576201349 (change=13.23261180611725 %)
[2026-01-09 13:04:33] 2026-01-09 18:03:36,214 | INFO     | left removable region: 20
[2026-01-09 13:04:33] 2026-01-09 18:03:36,214 | INFO     | sum of square deviations: 8041240790.378374
[2026-01-09 13:04:33] 2026-01-09 18:03:36,251 | INFO     | sum of deviations: -7439367653.905416
[2026-01-09 13:04:33] 2026-01-09 18:03:36,251 | INFO     | mean x: 1767972086.7702703
[2026-01-09 13:04:33] 2026-01-09 18:03:36,251 | INFO     | mean y: 2581845.4425675673
[2026-01-09 13:04:33] 2026-01-09 18:03:36,251 | INFO     | intersect: 1638224241.70857
[2026-01-09 13:04:33] 2026-01-09 18:03:36,252 | INFO     | chi2: 0.01631722682547986
[2026-01-09 13:04:33] 2026-01-09 18:03:36,252 | INFO     | current memory leak: -0.93 B/s (using 296 data points, chi2=0.02)
[2026-01-09 13:04:33] 2026-01-09 18:03:36,252 | INFO     | could have reported an average CPU frequency of 2956 MHz (14 samples)
[2026-01-09 13:04:33] 2026-01-09 18:03:36,253 | INFO     | ..............................
[2026-01-09 13:04:33] 2026-01-09 18:03:36,253 | INFO     | . Timing measurements:
[2026-01-09 13:04:33] 2026-01-09 18:03:36,253 | INFO     | . get job = 0 s
[2026-01-09 13:04:33] 2026-01-09 18:03:36,253 | INFO     | . initial setup = 10 s
[2026-01-09 13:04:33] 2026-01-09 18:03:36,253 | INFO     | . payload setup = 47 s
[2026-01-09 13:04:33] 2026-01-09 18:03:36,253 | INFO     | . stage-in = 0 s
[2026-01-09 13:04:33] 2026-01-09 18:03:36,253 | INFO     | . payload execution = 19930 s
[2026-01-09 13:04:33] 2026-01-09 18:03:36,253 | INFO     | . stage-out = 7 s
[2026-01-09 13:04:33] 2026-01-09 18:03:36,253 | INFO     | . log creation = 0 s
[2026-01-09 13:04:33] 2026-01-09 18:03:36,253 | INFO     | ..............................
[2026-01-09 13:04:33] 2026-01-09 18:03:36,597 | INFO     | time since job start (20114s) is within the limit (349056.0s)
[2026-01-09 13:04:33] 2026-01-09 18:03:36,612 | INFO     | 
[2026-01-09 13:04:33] 2026-01-09 18:03:36,612 | INFO     | job summary report
[2026-01-09 13:04:33] 2026-01-09 18:03:36,612 | INFO     | --------------------------------------------------
[2026-01-09 13:04:33] 2026-01-09 18:03:36,612 | INFO     | PanDA job id: 6963189385
[2026-01-09 13:04:33] 2026-01-09 18:03:36,612 | INFO     | task id: 47898826
[2026-01-09 13:04:33] 2026-01-09 18:03:36,612 | INFO     | errors: (none)
[2026-01-09 13:04:33] 2026-01-09 18:03:36,613 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 13:04:33] 2026-01-09 18:03:36,613 | INFO     | pilot state: finished 
[2026-01-09 13:04:33] 2026-01-09 18:03:36,613 | INFO     | transexitcode: 0
[2026-01-09 13:04:33] 2026-01-09 18:03:36,613 | INFO     | exeerrorcode: 0
[2026-01-09 13:04:33] 2026-01-09 18:03:36,613 | INFO     | exeerrordiag: 
[2026-01-09 13:04:33] 2026-01-09 18:03:36,613 | INFO     | exitcode: 0
[2026-01-09 13:04:33] 2026-01-09 18:03:36,613 | INFO     | exitmsg: OK
[2026-01-09 13:04:33] 2026-01-09 18:03:36,613 | INFO     | cpuconsumptiontime: 62006 s
[2026-01-09 13:04:33] 2026-01-09 18:03:36,613 | INFO     | nevents: 400
[2026-01-09 13:04:33] 2026-01-09 18:03:36,613 | INFO     | neventsw: 0
[2026-01-09 13:04:33] 2026-01-09 18:03:36,613 | INFO     | pid: 2186608
[2026-01-09 13:04:33] 2026-01-09 18:03:36,613 | INFO     | pgrp: 2186608
[2026-01-09 13:04:33] 2026-01-09 18:03:36,614 | INFO     | corecount: 9
[2026-01-09 13:04:33] 2026-01-09 18:03:36,614 | INFO     | event service: False
[2026-01-09 13:04:33] 2026-01-09 18:03:36,614 | INFO     | sizes: {0: 2283800, 1: 2283800, 2: 2284027, 13: 2284027, 24: 2284083, 36: 2284083, 37: 2284501, 48: 2284529, 19982: 2317491, 19991: 2326489, 19994: 2326545, 20032:
[2026-01-09 13:04:33] 2026-01-09 18:03:36,614 | INFO     | --------------------------------------------------
[2026-01-09 13:04:33] 2026-01-09 18:03:36,614 | INFO     | 
[2026-01-09 13:04:33] 2026-01-09 18:03:36,614 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-09 13:04:33] 2026-01-09 18:03:36,809 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 13:04:33] 2026-01-09 18:03:36,809 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 13:04:33] 2026-01-09 18:03:36,810 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 13:04:33] 2026-01-09 18:03:36,810 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 13:04:33] 2026-01-09 18:03:36,810 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 13:04:33] 2026-01-09 18:03:36,810 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 13:04:33] 2026-01-09 18:03:36,810 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 13:04:33] 2026-01-09 18:03:36,810 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 13:04:33] 2026-01-09 18:03:36,810 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 13:04:33] 2026-01-09 18:03:36,810 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 13:04:33] 2026-01-09 18:03:36,810 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 13:04:33] 2026-01-09 18:03:36,810 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 13:04:33] 2026-01-09 18:03:36,810 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 13:04:33] 2026-01-09 18:03:36,810 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 13:04:33] 2026-01-09 18:03:36,810 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 13:04:33] 2026-01-09 18:03:36,810 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 13:04:33] 2026-01-09 18:03:36,811 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 13:04:33] 2026-01-09 18:03:36,811 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 13:04:33] 2026-01-09 18:03:36,811 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 13:04:33] 2026-01-09 18:03:36,811 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 13:04:33] 2026-01-09 18:03:36,811 | INFO     | job 6963189385 has completed (purged errors)
[2026-01-09 13:04:33] 2026-01-09 18:03:36,811 | INFO     | overall cleanup function is called
[2026-01-09 13:04:33] 2026-01-09 18:03:37,851 | INFO     | --- collectZombieJob: --- 10, [2186608]
[2026-01-09 13:04:33] 2026-01-09 18:03:37,851 | INFO     | zombie collector waiting for pid 2186608
[2026-01-09 13:04:33] 2026-01-09 18:03:37,851 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 13:04:33] 2026-01-09 18:03:37,851 | INFO     | collected zombie processes
[2026-01-09 13:04:33] 2026-01-09 18:03:37,852 | INFO     | will attempt to kill all subprocesses of pid=2186608
[2026-01-09 13:04:33] 2026-01-09 18:03:40,545 | INFO     | process IDs to be killed: [2186608] (in reverse order)
[2026-01-09 13:04:33] 2026-01-09 18:03:41,415 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 13:04:33] 2026-01-09 18:03:41,415 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 13:04:33] 2026-01-09 18:03:41,458 | INFO     | did not find any defunct processes belonging to 2186608
[2026-01-09 13:04:33] 2026-01-09 18:03:41,597 | INFO     | did not find any defunct processes belonging to 2186608
[2026-01-09 13:04:33] 2026-01-09 18:03:41,598 | INFO     | ready for new job
[2026-01-09 13:04:33] 2026-01-09 18:03:41,598 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 13:04:33] 2026-01-09 18:03:41,600 | INFO     | ***************************************
[2026-01-09 13:04:33] 2026-01-09 18:03:41,601 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 13:04:33] 2026-01-09 18:03:41,601 | INFO     | ***************************************
[2026-01-09 13:04:33] 2026-01-09 18:03:41,611 | INFO     | 
[2026-01-09 13:04:33] 2026-01-09 18:03:41,640 | INFO     | architecture information:
[2026-01-09 13:04:33] 2026-01-09 18:03:41,646 | INFO     | executing command: cat /etc/os-release
[2026-01-09 13:04:33] 2026-01-09 18:03:41,712 | INFO     | cat /etc/os-release:
[2026-01-09 13:04:33] NAME="CentOS Linux"
[2026-01-09 13:04:33] VERSION="7 (Core)"
[2026-01-09 13:04:33] ID="centos"
[2026-01-09 13:04:33] ID_LIKE="rhel fedora"
[2026-01-09 13:04:33] VERSION_ID="7"
[2026-01-09 13:04:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 13:04:33] ANSI_COLOR="0;31"
[2026-01-09 13:04:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 13:04:33] HOME_URL="https://www.centos.org/"
[2026-01-09 13:04:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 13:04:33] 
[2026-01-09 13:04:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 13:04:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 13:04:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 13:04:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 13:04:33] 
[2026-01-09 13:04:33] 2026-01-09 18:03:41,712 | INFO     | ***************************************
[2026-01-09 13:04:33] 2026-01-09 18:03:42,217 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-09 13:04:33] 2026-01-09 18:03:42,334 | INFO     | sufficient remaining disk space (106110648320 B)
[2026-01-09 13:04:33] 2026-01-09 18:03:42,334 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 13:04:33] 2026-01-09 18:03:42,334 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 13:04:33] 2026-01-09 18:03:42,335 | INFO     | update_server=False
[2026-01-09 13:04:33] 2026-01-09 18:03:42,335 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 13:04:33] 2026-01-09 18:03:42,335 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 13:04:33] 2026-01-09 18:03:42,336 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 13:04:33] 2026-01-09 18:03:42,336 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 13:04:33] 2026-01-09 18:03:42,498 | INFO     | all payload control threads have been joined
[2026-01-09 13:04:33] 2026-01-09 18:03:42,607 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 13:04:33] 2026-01-09 18:03:42,607 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 13:04:33] 2026-01-09 18:03:42,607 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 13:04:33] 2026-01-09 18:03:42,607 | INFO     | will abort loop
[2026-01-09 13:04:33] 2026-01-09 18:03:42,679 | INFO     | all job control threads have been joined
[2026-01-09 13:04:33] 2026-01-09 18:03:43,341 | INFO     | [job] retrieve thread has finished
[2026-01-09 13:04:33] 2026-01-09 18:03:43,342 | INFO     | [job] queue monitor thread has finished
[2026-01-09 13:04:33] 2026-01-09 18:03:43,417 | INFO     | all data control threads have been joined
[2026-01-09 13:04:33] 2026-01-09 18:03:43,504 | INFO     | [payload] control thread has finished
[2026-01-09 13:04:33] 2026-01-09 18:03:43,617 | INFO     | [job] job monitor thread has finished
[2026-01-09 13:04:33] 2026-01-09 18:03:43,701 | INFO     | [job] control thread has finished
[2026-01-09 13:04:33] 2026-01-09 18:03:43,984 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 13:04:33] 2026-01-09 18:03:43,984 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 13:04:33] 2026-01-09 18:03:44,355 | INFO     | [data] copytool_out thread has finished
[2026-01-09 13:04:33] 2026-01-09 18:03:44,422 | INFO     | [data] control thread has finished
[2026-01-09 13:04:33] 2026-01-09 18:03:44,474 | INFO     | [payload] validate_post thread has finished
[2026-01-09 13:04:33] 2026-01-09 18:03:44,482 | INFO     | [data] copytool_in thread has finished
[2026-01-09 13:04:33] 2026-01-09 18:03:44,482 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 13:04:33] 2026-01-09 18:03:44,483 | INFO     | [job] validate thread has finished
[2026-01-09 13:04:33] 2026-01-09 18:03:44,498 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 13:04:33] 2026-01-09 18:03:44,709 | INFO     | [payload] failed_post thread has finished
[2026-01-09 13:04:33] 2026-01-09 18:03:46,389 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 13:04:33] 2026-01-09 18:04:00,557 | INFO     | [monitor] cgroup control has ended
[2026-01-09 13:04:33] 2026-01-09 18:04:02,630 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140692374374208)>', '<ExcThread(monitor, started 140691569104640)>']
[2026-01-09 13:04:33] 2026-01-09 18:04:07,658 | INFO     | all workflow threads have been joined
[2026-01-09 13:04:33] 2026-01-09 18:04:07,658 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 13:04:33] 2026-01-09 18:04:07,658 | INFO     | traces error code: 0
[2026-01-09 13:04:33] 2026-01-09 18:04:07,659 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 13:04:33] 2026-01-09 18:04:10,963 | INFO     | PID=2139924 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 13:04:33] 2026-01-09 18:04:10,964 | INFO     | .. there are 69 such processes running
[2026-01-09 13:04:33] 2026-01-09 18:04:10,965 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 13:04:33] 2026-01-09 18:04:10,965 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 13:04:33] 2026-01-09 18:04:10,965 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 13:04:33] 2026-01-09 18:04:10,965 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 13:04:33] 2026-01-09 18:04:10,965 | INFO     | [monitor] control thread has ended
[2026-01-09 13:04:33] 2026-01-09 18:04:11,597 [wrapper] ==== pilot stdout END ====
[2026-01-09 13:04:33] 2026-01-09 18:04:11,615 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 13:04:33] 2026-01-09 18:04:11,646 [wrapper] pilotpid: 2139924
[2026-01-09 13:04:33] 2026-01-09 18:04:11,661 [wrapper] Pilot exit status: 0
[2026-01-09 13:04:33] 2026-01-09 18:04:11,765 [wrapper] pandaids: 6963189385
[2026-01-09 13:04:33] 2026-01-09 18:04:12,463 [wrapper] cleanup supervisor_pilot  957230 2139925
[2026-01-09 13:04:33] 2026-01-09 18:04:12,468 [wrapper] Test setup, not cleaning
[2026-01-09 13:04:33] 2026-01-09 18:04:12,471 [wrapper] apfmon messages muted
[2026-01-09 13:04:33] 2026-01-09 18:04:12,474 [wrapper] ==== wrapper stdout END ====
[2026-01-09 13:04:33] 2026-01-09 18:04:12,476 [wrapper] ==== wrapper stderr END ====
[2026-01-09 13:04:33]  *** Error codes and diagnostics ***
[2026-01-09 13:04:33]     "exeErrorCode": 0,
[2026-01-09 13:04:33]     "exeErrorDiag": "",
[2026-01-09 13:04:33]     "pilotErrorCode": 0,
[2026-01-09 13:04:33]     "pilotErrorDiag": "",
[2026-01-09 13:04:33]  *** Listing of results directory ***
[2026-01-09 13:04:33] total 445184
[2026-01-09 13:04:33] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-09 13:04:33] -rwx------. 1 boincer umatlas     36322 Jan  8 23:25 runpilot2-wrapper.sh
[2026-01-09 13:04:33] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 23:30 queuedata.json
[2026-01-09 13:04:33] -rw-r--r--. 1 boincer umatlas       100 Jan  9 07:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 13:04:33] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 07:26 run_atlas
[2026-01-09 13:04:33] -rw-r--r--. 1 boincer umatlas       105 Jan  9 07:26 job.xml
[2026-01-09 13:04:33] -rw-r--r--. 2 boincer umatlas 225588989 Jan  9 07:26 EVNT.47898824._001469.pool.root.1
[2026-01-09 13:04:33] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 07:26 start_atlas.sh
[2026-01-09 13:04:33] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 07:26 shared
[2026-01-09 13:04:33] -rw-r--r--. 2 boincer umatlas    592400 Jan  9 07:26 input.tar.gz
[2026-01-09 13:04:33] -rw-r--r--. 1 boincer umatlas         0 Jan  9 07:26 boinc_lockfile
[2026-01-09 13:04:33] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 07:26 pandaJob.out
[2026-01-09 13:04:33] -rw-------. 1 boincer umatlas        57 Jan  9 07:26 setup.sh.local
[2026-01-09 13:04:33] -rw-------. 1 boincer umatlas    989377 Jan  9 07:28 agis_schedconf.cvmfs.json
[2026-01-09 13:04:33] drwx------. 5 boincer umatlas      4096 Jan  9 07:28 pilot3
[2026-01-09 13:04:33] -rw-------. 1 boincer umatlas 220920692 Jan  9 13:01 HITS.47898826._038267.pool.root.1
[2026-01-09 13:04:33] -rw-r--r--. 1 boincer umatlas       531 Jan  9 13:01 boinc_task_state.xml
[2026-01-09 13:04:33] -rw-------. 1 boincer umatlas      1045 Jan  9 13:02 memory_monitor_summary.json
[2026-01-09 13:04:33] -rw-------. 1 boincer umatlas   1516240 Jan  9 13:02 agis_ddmendpoints.agis.ALL.json
[2026-01-09 13:04:33] -rw-------. 1 boincer umatlas    525921 Jan  9 13:02 log.47898826._038267.job.log.tgz.1
[2026-01-09 13:04:33] -rw-------. 1 boincer umatlas        95 Jan  9 13:03 pilot_heartbeat.json
[2026-01-09 13:04:33] -rw-------. 1 boincer umatlas      7820 Jan  9 13:03 heartbeat.json
[2026-01-09 13:04:33] -rw-r--r--. 1 boincer umatlas      6839 Jan  9 13:03 init_data.xml
[2026-01-09 13:04:33] -rw-------. 1 boincer umatlas       823 Jan  9 13:04 pilotlog.txt
[2026-01-09 13:04:33] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 13:04 boinc_mmap_file
[2026-01-09 13:04:33] -rw-------. 1 boincer umatlas   2195350 Jan  9 13:04 log.47898826._038267.job.log.1
[2026-01-09 13:04:33] -rw-------. 1 boincer umatlas       357 Jan  9 13:04 output.list
[2026-01-09 13:04:33] -rw-r--r--. 1 boincer umatlas       620 Jan  9 13:04 runtime_log
[2026-01-09 13:04:33] -rw-------. 1 boincer umatlas   2744320 Jan  9 13:04 result.tar.gz
[2026-01-09 13:04:33] -rw-r--r--. 1 boincer umatlas      9328 Jan  9 13:04 runtime_log.err
[2026-01-09 13:04:33] -rw-------. 1 boincer umatlas       655 Jan  9 13:04 8xcKDmMFJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm5LmKDmnqPSgn.diag
[2026-01-09 13:04:33] -rw-r--r--. 1 boincer umatlas        28 Jan  9 13:04 wrapper_checkpoint.txt
[2026-01-09 13:04:33] -rw-r--r--. 1 boincer umatlas     21249 Jan  9 13:04 stderr.txt
[2026-01-09 13:04:33] HITS file was successfully produced:
[2026-01-09 13:04:33] -rw-------. 1 boincer umatlas 220920692 Jan  9 13:01 shared/HITS.pool.root.1
[2026-01-09 13:04:33]  *** Contents of shared directory: ***
[2026-01-09 13:04:33] total 439332
[2026-01-09 13:04:33] -rw-r--r--. 2 boincer umatlas 225588989 Jan  9 07:26 ATLAS.root_0
[2026-01-09 13:04:33] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 07:26 start_atlas.sh
[2026-01-09 13:04:33] -rw-r--r--. 2 boincer umatlas    592400 Jan  9 07:26 input.tar.gz
[2026-01-09 13:04:33] -rw-------. 1 boincer umatlas 220920692 Jan  9 13:01 HITS.pool.root.1
[2026-01-09 13:04:33] -rw-------. 1 boincer umatlas   2744320 Jan  9 13:04 result.tar.gz
13:04:35 (2111046): run_atlas exited; CPU time 63157.663529
13:04:35 (2111046): called boinc_finish(0)

</stderr_txt>
]]>

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