Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
17:55:59 (556196): wrapper (7.7.26015): starting
17:55:59 (556196): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 17:55:59] Arguments: --nthreads 12
[2026-01-09 17:55:59] Threads: 12
[2026-01-09 17:55:59] Checking for CVMFS
[2026-01-09 17:55:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 17:55:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 17:55:59] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 17:55:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 17:55:59] 2.13.3.0 464966 305 46568 154950 0 57 2645450 4096001 0 130560 0 219058 99.985 13729 161 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-09 17:55:59] CVMFS is ok
[2026-01-09 17:55:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 17:55:59] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-09 17:55:59] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-09 17:55:59] Further information can be found at the LHC@home message board.
[2026-01-09 17:55:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 17:55:59] Checking for apptainer binary...
[2026-01-09 17:55:59] apptainer is not installed, using version from CVMFS
[2026-01-09 17:55:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 17:56:00] ws24
[2026-01-09 17:56:00] apptainer works
[2026-01-09 17:56:00] Set ATHENA_PROC_NUMBER=12
[2026-01-09 17:56:00] Set ATHENA_CORE_NUMBER=12
[2026-01-09 17:56:00] Starting ATLAS job with PandaID=6963188284
[2026-01-09 17:56:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 19:47:31]  *** The last 200 lines of the pilot log: ***
[2026-01-09 19:47:31] 2026-01-09 18:46:29,630 | INFO     | mean y: 2648606.7685185187
[2026-01-09 19:47:31] 2026-01-09 18:46:29,630 | INFO     | intersect: -108374925565.73615
[2026-01-09 19:47:31] 2026-01-09 18:46:29,630 | INFO     | chi2: 2.6401362681666924
[2026-01-09 19:47:31] 2026-01-09 18:46:29,630 | INFO     | sum of square deviations: 338804492.0
[2026-01-09 19:47:31] 2026-01-09 18:46:29,631 | INFO     | sum of deviations: 22667089674.0
[2026-01-09 19:47:31] 2026-01-09 18:46:29,631 | INFO     | mean x: 1767980919.0
[2026-01-09 19:47:31] 2026-01-09 18:46:29,631 | INFO     | mean y: 2644876.0485436893
[2026-01-09 19:47:31] 2026-01-09 18:46:29,631 | INFO     | intersect: -118280857790.42122
[2026-01-09 19:47:31] 2026-01-09 18:46:29,631 | INFO     | chi2: 2.64755156236388
[2026-01-09 19:47:31] 2026-01-09 18:46:29,631 | INFO     | current chi2=2.64755156236388 (change=-0.28086785847370754 %)
[2026-01-09 19:47:31] 2026-01-09 18:46:29,631 | INFO     | right removable region: 102
[2026-01-09 19:47:31] 2026-01-09 18:46:29,632 | INFO     | sum of square deviations: 338804492.0
[2026-01-09 19:47:31] 2026-01-09 18:46:29,632 | INFO     | sum of deviations: -4272796301.000001
[2026-01-09 19:47:31] 2026-01-09 18:46:29,632 | INFO     | mean x: 1767981224.0
[2026-01-09 19:47:31] 2026-01-09 18:46:29,632 | INFO     | mean y: 2731174.2718446604
[2026-01-09 19:47:31] 2026-01-09 18:46:29,632 | INFO     | intersect: 22299435652.867287
[2026-01-09 19:47:31] 2026-01-09 18:46:29,632 | INFO     | chi2: 0.13948704446900306
[2026-01-09 19:47:31] 2026-01-09 18:46:29,632 | INFO     | current chi2=0.13948704446900306 (change=94.71667253880564 %)
[2026-01-09 19:47:31] 2026-01-09 18:46:29,633 | INFO     | sum of square deviations: 291817564.5
[2026-01-09 19:47:31] 2026-01-09 18:46:29,633 | INFO     | sum of deviations: -4864516553.000001
[2026-01-09 19:47:31] 2026-01-09 18:46:29,633 | INFO     | mean x: 1767981376.5
[2026-01-09 19:47:31] 2026-01-09 18:46:29,633 | INFO     | mean y: 2732728.285714286
[2026-01-09 19:47:31] 2026-01-09 18:46:29,633 | INFO     | intersect: 29474483978.47469
[2026-01-09 19:47:31] 2026-01-09 18:46:29,633 | INFO     | chi2: 0.08516053921067608
[2026-01-09 19:47:31] 2026-01-09 18:46:29,633 | INFO     | current chi2=0.08516053921067608 (change=38.9473484545724 %)
[2026-01-09 19:47:31] 2026-01-09 18:46:29,633 | INFO     | sum of square deviations: 249388862.0
[2026-01-09 19:47:31] 2026-01-09 18:46:29,634 | INFO     | sum of deviations: 48743087.0
[2026-01-09 19:47:31] 2026-01-09 18:46:29,634 | INFO     | mean x: 1767981529.0
[2026-01-09 19:47:31] 2026-01-09 18:46:29,634 | INFO     | mean y: 2715035.634408602
[2026-01-09 19:47:31] 2026-01-09 18:46:29,634 | INFO     | intersect: -342837194.69109815
[2026-01-09 19:47:31] 2026-01-09 18:46:29,634 | INFO     | chi2: 0.02239047381017649
[2026-01-09 19:47:31] 2026-01-09 18:46:29,634 | INFO     | current chi2=0.02239047381017649 (change=73.70792386038634 %)
[2026-01-09 19:47:31] 2026-01-09 18:46:29,634 | INFO     | sum of square deviations: 211285822.0
[2026-01-09 19:47:31] 2026-01-09 18:46:29,635 | INFO     | sum of deviations: 654841344.0
[2026-01-09 19:47:31] 2026-01-09 18:46:29,635 | INFO     | mean x: 1767981681.5
[2026-01-09 19:47:31] 2026-01-09 18:46:29,635 | INFO     | mean y: 2712794.5681818184
[2026-01-09 19:47:31] 2026-01-09 18:46:29,635 | INFO     | intersect: -5476819573.111652
[2026-01-09 19:47:31] 2026-01-09 18:46:29,635 | INFO     | chi2: 0.0016627539604226168
[2026-01-09 19:47:31] 2026-01-09 18:46:29,635 | INFO     | current chi2=0.0016627539604226168 (change=92.57383307508708 %)
[2026-01-09 19:47:31] 2026-01-09 18:46:29,635 | INFO     | sum of square deviations: 177275882.0
[2026-01-09 19:47:31] 2026-01-09 18:46:29,636 | INFO     | sum of deviations: 399710978.9999994
[2026-01-09 19:47:31] 2026-01-09 18:46:29,636 | INFO     | mean x: 1767981834.0
[2026-01-09 19:47:31] 2026-01-09 18:46:29,636 | INFO     | mean y: 2713938.795180723
[2026-01-09 19:47:31] 2026-01-09 18:46:29,636 | INFO     | intersect: -3983624990.9547467
[2026-01-09 19:47:31] 2026-01-09 18:46:29,636 | INFO     | chi2: 0.0015562328025120102
[2026-01-09 19:47:31] 2026-01-09 18:46:29,636 | INFO     | current chi2=0.0015562328025120102 (change=6.4063090779547665 %)
[2026-01-09 19:47:31] 2026-01-09 18:46:29,636 | INFO     | left removable region: 50
[2026-01-09 19:47:31] 2026-01-09 18:46:29,636 | INFO     | sum of square deviations: 43584073.0
[2026-01-09 19:47:31] 2026-01-09 18:46:29,637 | INFO     | sum of deviations: -281863584.5
[2026-01-09 19:47:31] 2026-01-09 18:46:29,637 | INFO     | mean x: 1767982413.5
[2026-01-09 19:47:31] 2026-01-09 18:46:29,637 | INFO     | mean y: 2717339.0576923075
[2026-01-09 19:47:31] 2026-01-09 18:46:29,637 | INFO     | intersect: 11436478025.032845
[2026-01-09 19:47:31] 2026-01-09 18:46:29,637 | INFO     | chi2: 0.00025474648889972065
[2026-01-09 19:47:31] 2026-01-09 18:46:29,637 | INFO     | current memory leak: -6.47 B/s (using 52 data points, chi2=0.00)
[2026-01-09 19:47:31] 2026-01-09 18:46:29,638 | INFO     | could have reported an average CPU frequency of 3095 MHz (7 samples)
[2026-01-09 19:47:31] 2026-01-09 18:46:29,638 | INFO     | ..............................
[2026-01-09 19:47:31] 2026-01-09 18:46:29,638 | INFO     | . Timing measurements:
[2026-01-09 19:47:31] 2026-01-09 18:46:29,638 | INFO     | . get job = 0 s
[2026-01-09 19:47:31] 2026-01-09 18:46:29,638 | INFO     | . initial setup = 6 s
[2026-01-09 19:47:31] 2026-01-09 18:46:29,638 | INFO     | . payload setup = 11 s
[2026-01-09 19:47:31] 2026-01-09 18:46:29,638 | INFO     | . stage-in = 0 s
[2026-01-09 19:47:31] 2026-01-09 18:46:29,638 | INFO     | . payload execution = 6565 s
[2026-01-09 19:47:31] 2026-01-09 18:46:29,638 | INFO     | . stage-out = 0 s
[2026-01-09 19:47:31] 2026-01-09 18:46:29,639 | INFO     | . log creation = 0 s
[2026-01-09 19:47:31] 2026-01-09 18:46:29,639 | INFO     | ..............................
[2026-01-09 19:47:31] 2026-01-09 18:46:29,710 | INFO     | 
[2026-01-09 19:47:31] 2026-01-09 18:46:29,710 | INFO     | job summary report
[2026-01-09 19:47:31] 2026-01-09 18:46:29,710 | INFO     | --------------------------------------------------
[2026-01-09 19:47:31] 2026-01-09 18:46:29,710 | INFO     | PanDA job id: 6963188284
[2026-01-09 19:47:31] 2026-01-09 18:46:29,710 | INFO     | task id: 47898826
[2026-01-09 19:47:31] 2026-01-09 18:46:29,710 | INFO     | errors: (none)
[2026-01-09 19:47:31] 2026-01-09 18:46:29,710 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 19:47:31] 2026-01-09 18:46:29,710 | INFO     | pilot state: finished 
[2026-01-09 19:47:31] 2026-01-09 18:46:29,710 | INFO     | transexitcode: 0
[2026-01-09 19:47:31] 2026-01-09 18:46:29,710 | INFO     | exeerrorcode: 0
[2026-01-09 19:47:31] 2026-01-09 18:46:29,710 | INFO     | exeerrordiag: 
[2026-01-09 19:47:31] 2026-01-09 18:46:29,710 | INFO     | exitcode: 0
[2026-01-09 19:47:31] 2026-01-09 18:46:29,710 | INFO     | exitmsg: OK
[2026-01-09 19:47:31] 2026-01-09 18:46:29,711 | INFO     | cpuconsumptiontime: 61781 s
[2026-01-09 19:47:31] 2026-01-09 18:46:29,711 | INFO     | nevents: 400
[2026-01-09 19:47:31] 2026-01-09 18:46:29,711 | INFO     | neventsw: 0
[2026-01-09 19:47:31] 2026-01-09 18:46:29,711 | INFO     | pid: 566526
[2026-01-09 19:47:31] 2026-01-09 18:46:29,711 | INFO     | pgrp: 566526
[2026-01-09 19:47:31] 2026-01-09 18:46:29,711 | INFO     | corecount: 12
[2026-01-09 19:47:31] 2026-01-09 18:46:29,711 | INFO     | event service: False
[2026-01-09 19:47:31] 2026-01-09 18:46:29,711 | INFO     | sizes: {0: 2283979, 4: 2284241, 11: 2284269, 6580: 2311427, 6581: 2320441, 6584: 2320497, 6599: 2320819}
[2026-01-09 19:47:31] 2026-01-09 18:46:29,711 | INFO     | --------------------------------------------------
[2026-01-09 19:47:31] 2026-01-09 18:46:29,711 | INFO     | 
[2026-01-09 19:47:31] 2026-01-09 18:46:29,711 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/14
[2026-01-09 19:47:31] 2026-01-09 18:46:29,730 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 19:47:31] 2026-01-09 18:46:29,730 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 19:47:31] 2026-01-09 18:46:29,730 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 19:47:31] 2026-01-09 18:46:29,730 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 19:47:31] 2026-01-09 18:46:29,730 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 19:47:31] 2026-01-09 18:46:29,730 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 19:47:31] 2026-01-09 18:46:29,730 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 19:47:31] 2026-01-09 18:46:29,731 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 19:47:31] 2026-01-09 18:46:29,731 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 19:47:31] 2026-01-09 18:46:29,731 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 19:47:31] 2026-01-09 18:46:29,731 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 19:47:31] 2026-01-09 18:46:29,731 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 19:47:31] 2026-01-09 18:46:29,731 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 19:47:31] 2026-01-09 18:46:29,731 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 19:47:31] 2026-01-09 18:46:29,731 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 19:47:31] 2026-01-09 18:46:29,731 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 19:47:31] 2026-01-09 18:46:29,731 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 19:47:31] 2026-01-09 18:46:29,731 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 19:47:31] 2026-01-09 18:46:29,731 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 19:47:31] 2026-01-09 18:46:29,731 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 19:47:31] 2026-01-09 18:46:29,731 | INFO     | job 6963188284 has completed (purged errors)
[2026-01-09 19:47:31] 2026-01-09 18:46:29,732 | INFO     | overall cleanup function is called
[2026-01-09 19:47:31] 2026-01-09 18:46:30,740 | INFO     | --- collectZombieJob: --- 10, [566526]
[2026-01-09 19:47:31] 2026-01-09 18:46:30,740 | INFO     | zombie collector waiting for pid 566526
[2026-01-09 19:47:31] 2026-01-09 18:46:30,740 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 19:47:31] 2026-01-09 18:46:30,740 | INFO     | collected zombie processes
[2026-01-09 19:47:31] 2026-01-09 18:46:30,740 | INFO     | will attempt to kill all subprocesses of pid=566526
[2026-01-09 19:47:31] 2026-01-09 18:46:30,918 | INFO     | process IDs to be killed: [566526] (in reverse order)
[2026-01-09 19:47:31] 2026-01-09 18:46:31,004 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 19:47:31] 2026-01-09 18:46:31,004 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 19:47:31] 2026-01-09 18:46:31,012 | INFO     | did not find any defunct processes belonging to 566526
[2026-01-09 19:47:31] 2026-01-09 18:46:31,019 | INFO     | did not find any defunct processes belonging to 566526
[2026-01-09 19:47:31] 2026-01-09 18:46:31,019 | INFO     | ready for new job
[2026-01-09 19:47:31] 2026-01-09 18:46:31,019 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 19:47:31] 2026-01-09 18:46:31,021 | INFO     | ***************************************
[2026-01-09 19:47:31] 2026-01-09 18:46:31,021 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 19:47:31] 2026-01-09 18:46:31,021 | INFO     | ***************************************
[2026-01-09 19:47:31] 2026-01-09 18:46:31,021 | INFO     | 
[2026-01-09 19:47:31] 2026-01-09 18:46:31,022 | INFO     | architecture information:
[2026-01-09 19:47:31] 2026-01-09 18:46:31,023 | INFO     | executing command: cat /etc/os-release
[2026-01-09 19:47:31] 2026-01-09 18:46:31,037 | INFO     | cat /etc/os-release:
[2026-01-09 19:47:31] NAME="CentOS Linux"
[2026-01-09 19:47:31] VERSION="7 (Core)"
[2026-01-09 19:47:31] ID="centos"
[2026-01-09 19:47:31] ID_LIKE="rhel fedora"
[2026-01-09 19:47:31] VERSION_ID="7"
[2026-01-09 19:47:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 19:47:31] ANSI_COLOR="0;31"
[2026-01-09 19:47:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 19:47:31] HOME_URL="https://www.centos.org/"
[2026-01-09 19:47:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 19:47:31] 
[2026-01-09 19:47:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 19:47:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 19:47:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 19:47:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 19:47:31] 
[2026-01-09 19:47:31] 2026-01-09 18:46:31,037 | INFO     | ***************************************
[2026-01-09 19:47:31] 2026-01-09 18:46:31,540 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/14
[2026-01-09 19:47:31] 2026-01-09 18:46:31,562 | INFO     | sufficient remaining disk space (48680140800 B)
[2026-01-09 19:47:31] 2026-01-09 18:46:31,562 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 19:47:31] 2026-01-09 18:46:31,562 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 19:47:31] 2026-01-09 18:46:31,562 | INFO     | update_server=False
[2026-01-09 19:47:31] 2026-01-09 18:46:31,563 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 19:47:31] 2026-01-09 18:46:31,563 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 19:47:31] 2026-01-09 18:46:31,563 | INFO     | aborting loop
[2026-01-09 19:47:31] 2026-01-09 18:46:31,564 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 19:47:31] 2026-01-09 18:46:31,751 | INFO     | all job control threads have been joined
[2026-01-09 19:47:31] 2026-01-09 18:46:32,057 | INFO     | all data control threads have been joined
[2026-01-09 19:47:31] 2026-01-09 18:46:32,568 | INFO     | [job] retrieve thread has finished
[2026-01-09 19:47:31] 2026-01-09 18:46:32,569 | INFO     | [job] job monitor thread has finished
[2026-01-09 19:47:31] 2026-01-09 18:46:32,570 | INFO     | [job] queue monitor thread has finished
[2026-01-09 19:47:31] 2026-01-09 18:46:32,687 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 19:47:31] 2026-01-09 18:46:32,741 | INFO     | all payload control threads have been joined
[2026-01-09 19:47:31] 2026-01-09 18:46:32,756 | INFO     | [job] control thread has finished
[2026-01-09 19:47:31] 2026-01-09 18:46:32,992 | INFO     | [payload] failed_post thread has finished
[2026-01-09 19:47:31] 2026-01-09 18:46:33,063 | INFO     | [data] control thread has finished
[2026-01-09 19:47:31] 2026-01-09 18:46:33,357 | INFO     | [data] copytool_in thread has finished
[2026-01-09 19:47:31] 2026-01-09 18:46:33,503 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 19:47:31] 2026-01-09 18:46:33,512 | INFO     | [job] validate thread has finished
[2026-01-09 19:47:31] 2026-01-09 18:46:33,746 | INFO     | [payload] control thread has finished
[2026-01-09 19:47:31] 2026-01-09 18:46:33,769 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 19:47:31] 2026-01-09 18:46:33,843 | INFO     | [payload] validate_post thread has finished
[2026-01-09 19:47:31] 2026-01-09 18:46:33,851 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 19:47:31] 2026-01-09 18:46:34,149 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 19:47:31] 2026-01-09 18:46:34,692 | INFO     | [data] copytool_out thread has finished
[2026-01-09 19:47:31] 2026-01-09 18:46:38,155 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 19:47:31] 2026-01-09 18:46:42,307 | INFO     | job.realtimelogging is not enabled
[2026-01-09 19:47:31] 2026-01-09 18:46:43,312 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 19:47:31] 2026-01-09 18:47:01,657 | INFO     | PID=559976 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 19:47:31] 2026-01-09 18:47:01,658 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 19:47:31] 2026-01-09 18:47:01,658 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 19:47:31] 2026-01-09 18:47:01,658 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 19:47:31] 2026-01-09 18:47:26,069 | INFO     | [monitor] cgroup control has ended
[2026-01-09 19:47:31] 2026-01-09 18:47:26,576 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 128723926579008)>', '<ExcThread(monitor, started 128723114256128)>']
[2026-01-09 19:47:31] 2026-01-09 18:47:26,785 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 19:47:31] 2026-01-09 18:47:26,785 | INFO     | [monitor] control thread has ended
[2026-01-09 19:47:31] 2026-01-09 18:47:31,601 | INFO     | all workflow threads have been joined
[2026-01-09 19:47:31] 2026-01-09 18:47:31,601 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 19:47:31] 2026-01-09 18:47:31,602 | INFO     | traces error code: 0
[2026-01-09 19:47:31] 2026-01-09 18:47:31,602 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 19:47:31] 2026-01-09 18:47:31,727 [wrapper] ==== pilot stdout END ====
[2026-01-09 19:47:31] 2026-01-09 18:47:31,731 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 19:47:31] 2026-01-09 18:47:31,733 [wrapper] pilotpid: 559976
[2026-01-09 19:47:31] 2026-01-09 18:47:31,738 [wrapper] Pilot exit status: 0
[2026-01-09 19:47:31] 2026-01-09 18:47:31,748 [wrapper] pandaids: 6963188284
[2026-01-09 19:47:31] 2026-01-09 18:47:31,800 [wrapper] cleanup supervisor_pilot  587184 559977
[2026-01-09 19:47:31] 2026-01-09 18:47:31,804 [wrapper] Test setup, not cleaning
[2026-01-09 19:47:31] 2026-01-09 18:47:31,807 [wrapper] apfmon messages muted
[2026-01-09 19:47:31] 2026-01-09 18:47:31,811 [wrapper] ==== wrapper stdout END ====
[2026-01-09 19:47:31] 2026-01-09 18:47:31,813 [wrapper] ==== wrapper stderr END ====
[2026-01-09 19:47:31]  *** Error codes and diagnostics ***
[2026-01-09 19:47:31]     "exeErrorCode": 0,
[2026-01-09 19:47:31]     "exeErrorDiag": "",
[2026-01-09 19:47:31]     "pilotErrorCode": 0,
[2026-01-09 19:47:31]     "pilotErrorDiag": "",
[2026-01-09 19:47:31]  *** Listing of results directory ***
[2026-01-09 19:47:31] total 435204
[2026-01-09 19:47:31] -rw-r--r-- 1 boinc boinc    579449 Jan  9 05:21 pilot3.tar.gz
[2026-01-09 19:47:31] -rwx------ 1 boinc boinc     36322 Jan  9 05:25 runpilot2-wrapper.sh
[2026-01-09 19:47:31] -rw-r--r-- 1 boinc boinc      5112 Jan  9 05:29 queuedata.json
[2026-01-09 19:47:31] -rw-r--r-- 1 boinc boinc       100 Jan  9 17:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 19:47:31] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 17:55 run_atlas
[2026-01-09 19:47:31] -rw-r--r-- 1 boinc boinc       105 Jan  9 17:55 job.xml
[2026-01-09 19:47:31] -rw-r--r-- 1 boinc boinc      9530 Jan  9 17:55 init_data.xml
[2026-01-09 19:47:31] -rw-r--r-- 2 boinc boinc 223375160 Jan  9 17:55 EVNT.47898824._001436.pool.root.1
[2026-01-09 19:47:31] -rw-r--r-- 2 boinc boinc     15847 Jan  9 17:55 start_atlas.sh
[2026-01-09 19:47:31] drwxrwx--x 2 boinc boinc      4096 Jan  9 17:55 shared
[2026-01-09 19:47:31] -rw-r--r-- 2 boinc boinc    592396 Jan  9 17:55 input.tar.gz
[2026-01-09 19:47:31] -rw-r--r-- 1 boinc boinc         0 Jan  9 17:55 boinc_lockfile
[2026-01-09 19:47:31] -rw-r--r-- 1 boinc boinc      2520 Jan  9 17:56 pandaJob.out
[2026-01-09 19:47:31] -rw------- 1 boinc boinc    989356 Jan  9 17:56 agis_schedconf.cvmfs.json
[2026-01-09 19:47:31] -rw------- 1 boinc boinc   1516240 Jan  9 17:56 agis_ddmendpoints.agis.ALL.json
[2026-01-09 19:47:31] drwx------ 5 boinc boinc      4096 Jan  9 17:56 pilot3
[2026-01-09 19:47:31] -rw------- 1 boinc boinc 215653384 Jan  9 19:45 HITS.47898826._037436.pool.root.1
[2026-01-09 19:47:31] -rw-r--r-- 1 boinc boinc       529 Jan  9 19:46 boinc_task_state.xml
[2026-01-09 19:47:31] -rw------- 1 boinc boinc      1034 Jan  9 19:46 memory_monitor_summary.json
[2026-01-09 19:47:31] -rw------- 1 boinc boinc    417240 Jan  9 19:46 log.47898826._037436.job.log.tgz.1
[2026-01-09 19:47:31] -rw------- 1 boinc boinc      7756 Jan  9 19:46 heartbeat.json
[2026-01-09 19:47:31] -rw-r--r-- 1 boinc boinc        27 Jan  9 19:47 wrapper_checkpoint.txt
[2026-01-09 19:47:31] -rw------- 1 boinc boinc        95 Jan  9 19:47 pilot_heartbeat.json
[2026-01-09 19:47:31] -rw------- 1 boinc boinc      4827 Jan  9 19:47 pilotlog.txt
[2026-01-09 19:47:31] -rw-r--r-- 1 boinc boinc      8192 Jan  9 19:47 boinc_mmap_file
[2026-01-09 19:47:31] -rw------- 1 boinc boinc    934851 Jan  9 19:47 log.47898826._037436.job.log.1
[2026-01-09 19:47:31] -rw------- 1 boinc boinc       357 Jan  9 19:47 output.list
[2026-01-09 19:47:31] -rw-r--r-- 1 boinc boinc       620 Jan  9 19:47 runtime_log
[2026-01-09 19:47:31] -rw------- 1 boinc boinc   1372160 Jan  9 19:47 result.tar.gz
[2026-01-09 19:47:31] -rw-r--r-- 1 boinc boinc      8874 Jan  9 19:47 runtime_log.err
[2026-01-09 19:47:31] -rw------- 1 boinc boinc       640 Jan  9 19:47 aqyKDmwEJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmX7gKDmg8JUom.diag
[2026-01-09 19:47:31] -rw-r--r-- 1 boinc boinc     20962 Jan  9 19:47 stderr.txt
[2026-01-09 19:47:31] HITS file was successfully produced:
[2026-01-09 19:47:31] -rw------- 1 boinc boinc 215653384 Jan  9 19:45 shared/HITS.pool.root.1
[2026-01-09 19:47:31]  *** Contents of shared directory: ***
[2026-01-09 19:47:31] total 430684
[2026-01-09 19:47:31] -rw-r--r-- 2 boinc boinc 223375160 Jan  9 17:55 ATLAS.root_0
[2026-01-09 19:47:31] -rw-r--r-- 2 boinc boinc     15847 Jan  9 17:55 start_atlas.sh
[2026-01-09 19:47:31] -rw-r--r-- 2 boinc boinc    592396 Jan  9 17:55 input.tar.gz
[2026-01-09 19:47:31] -rw------- 1 boinc boinc 215653384 Jan  9 19:45 HITS.pool.root.1
[2026-01-09 19:47:31] -rw------- 1 boinc boinc   1372160 Jan  9 19:47 result.tar.gz
19:47:33 (556196): run_atlas exited; CPU time 61569.478090
19:47:33 (556196): called boinc_finish(0)

</stderr_txt>
]]>

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