Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:56:12 (1178): wrapper (7.7.26015): starting
06:56:12 (1178): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 06:56:12] Arguments: --nthreads 8
[2026-01-09 06:56:12] Threads: 8
[2026-01-09 06:56:12] Checking for CVMFS
[2026-01-09 06:56:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 06:56:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 06:56:13] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 06:56:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 06:56:13] 2.11.2.0 2776 106406 91428 154942 1 58 17302683 20275201 1 130560 0 22040647 99.794 6628376 31572 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 06:56:13] CVMFS is ok
[2026-01-09 06:56:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 06:56:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 06:56:13] Further information can be found at the LHC@home message board.
[2026-01-09 06:56:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 06:56:13] Checking for apptainer binary...
[2026-01-09 06:56:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 06:56:13] Running /usr/bin/apptainer --version
[2026-01-09 06:56:13] apptainer version 1.3.2-1.el7
[2026-01-09 06:56:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 06:56:15] c-115-7.aglt2.org
[2026-01-09 06:56:15] apptainer works
[2026-01-09 06:56:15] Set ATHENA_PROC_NUMBER=8
[2026-01-09 06:56:15] Set ATHENA_CORE_NUMBER=8
[2026-01-09 06:56:15] Starting ATLAS job with PandaID=6963188650
[2026-01-09 06:56:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 09:33:55]  *** The last 200 lines of the pilot log: ***
[2026-01-09 09:33:55] 2026-01-09 14:32:43,989 | INFO     | time since job start (9369s) is within the limit (349056.0s)
[2026-01-09 09:33:55] 2026-01-09 14:32:43,990 | INFO     | 9372s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-09 09:33:55] 2026-01-09 14:32:45,996 | INFO     | time since job start (9371s) is within the limit (349056.0s)
[2026-01-09 09:33:55] 2026-01-09 14:32:46,292 | INFO     | monitor loop #695: job 0:6963188650 is in state 'finished'
[2026-01-09 09:33:55] 2026-01-09 14:32:46,292 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 09:33:55] 2026-01-09 14:32:48,002 | INFO     | time since job start (9374s) is within the limit (349056.0s)
[2026-01-09 09:33:55] 2026-01-09 14:32:48,795 | INFO     | monitor loop #696: job 0:6963188650 is in state 'finished'
[2026-01-09 09:33:55] 2026-01-09 14:32:48,795 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 09:33:55] 2026-01-09 14:32:48,848 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 09:33:55] 2026-01-09 14:32:48,852 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1712.375
[2026-01-09 09:33:55] 2026-01-09 14:32:48,854 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963188650/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 09:33:55] 2026-01-09 14:32:48,856 | INFO     | extracted standard info from prmon json
[2026-01-09 09:33:55] 2026-01-09 14:32:48,856 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 09:33:55] 2026-01-09 14:32:48,856 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 09:33:55] 2026-01-09 14:32:48,857 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 09:33:55] 2026-01-09 14:32:48,857 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 09:33:55] 2026-01-09 14:32:48,861 | INFO     | fitting pss+swap vs Time
[2026-01-09 09:33:55] 2026-01-09 14:32:48,861 | INFO     | sum of square deviations: 1110539892.0
[2026-01-09 09:33:55] 2026-01-09 14:32:48,862 | INFO     | sum of deviations: -9943196847.000002
[2026-01-09 09:33:55] 2026-01-09 14:32:48,862 | INFO     | mean x: 1767964461.0
[2026-01-09 09:33:55] 2026-01-09 14:32:48,862 | INFO     | mean y: 2564343.0196078434
[2026-01-09 09:33:55] 2026-01-09 14:32:48,862 | INFO     | intersect: 15831998999.855202
[2026-01-09 09:33:55] 2026-01-09 14:32:48,862 | INFO     | chi2: 1.5136951707004709
[2026-01-09 09:33:55] 2026-01-09 14:32:48,863 | INFO     | sum of square deviations: 1005179777.0
[2026-01-09 09:33:55] 2026-01-09 14:32:48,863 | INFO     | sum of deviations: -9180925474.999996
[2026-01-09 09:33:55] 2026-01-09 14:32:48,864 | INFO     | mean x: 1767964308.5
[2026-01-09 09:33:55] 2026-01-09 14:32:48,864 | INFO     | mean y: 2565446.756756757
[2026-01-09 09:33:55] 2026-01-09 14:32:48,864 | INFO     | intersect: 16150471453.423664
[2026-01-09 09:33:55] 2026-01-09 14:32:48,864 | INFO     | chi2: 1.5130604606205378
[2026-01-09 09:33:55] 2026-01-09 14:32:48,864 | INFO     | current chi2=1.5130604606205378 (change=0.04193116898426669 %)
[2026-01-09 09:33:55] 2026-01-09 14:32:48,864 | INFO     | right removable region: 147
[2026-01-09 09:33:55] 2026-01-09 14:32:48,865 | INFO     | sum of square deviations: 1005179777.0
[2026-01-09 09:33:55] 2026-01-09 14:32:48,865 | INFO     | sum of deviations: -31413640767.5
[2026-01-09 09:33:55] 2026-01-09 14:32:48,865 | INFO     | mean x: 1767964613.5
[2026-01-09 09:33:55] 2026-01-09 14:32:48,865 | INFO     | mean y: 2594921.439189189
[2026-01-09 09:33:55] 2026-01-09 14:32:48,866 | INFO     | intersect: 55254607077.80888
[2026-01-09 09:33:55] 2026-01-09 14:32:48,866 | INFO     | chi2: 0.15263129715483106
[2026-01-09 09:33:55] 2026-01-09 14:32:48,866 | INFO     | current chi2=0.15263129715483106 (change=89.91664239212707 %)
[2026-01-09 09:33:55] 2026-01-09 14:32:48,866 | INFO     | sum of square deviations: 906703512.0
[2026-01-09 09:33:55] 2026-01-09 14:32:48,867 | INFO     | sum of deviations: -29551639343.999992
[2026-01-09 09:33:55] 2026-01-09 14:32:48,867 | INFO     | mean x: 1767964766.0
[2026-01-09 09:33:55] 2026-01-09 14:32:48,867 | INFO     | mean y: 2591969.146853147
[2026-01-09 09:33:55] 2026-01-09 14:32:48,867 | INFO     | intersect: 57624798618.02915
[2026-01-09 09:33:55] 2026-01-09 14:32:48,867 | INFO     | chi2: 0.1397806931801436
[2026-01-09 09:33:55] 2026-01-09 14:32:48,868 | INFO     | current chi2=0.1397806931801436 (change=8.419376768875683 %)
[2026-01-09 09:33:55] 2026-01-09 14:32:48,868 | INFO     | left removable region: 20
[2026-01-09 09:33:55] 2026-01-09 14:32:48,868 | INFO     | sum of square deviations: 635130048.0
[2026-01-09 09:33:55] 2026-01-09 14:32:48,869 | INFO     | sum of deviations: -19819691475.0
[2026-01-09 09:33:55] 2026-01-09 14:32:48,869 | INFO     | mean x: 1767964888.0
[2026-01-09 09:33:55] 2026-01-09 14:32:48,869 | INFO     | mean y: 2579219.094488189
[2026-01-09 09:33:55] 2026-01-09 14:32:48,869 | INFO     | intersect: 55173199360.80275
[2026-01-09 09:33:55] 2026-01-09 14:32:48,869 | INFO     | chi2: 0.1270729548777516
[2026-01-09 09:33:55] 2026-01-09 14:32:48,869 | INFO     | current memory leak: -31.21 B/s (using 127 data points, chi2=0.13)
[2026-01-09 09:33:55] 2026-01-09 14:32:48,870 | INFO     | could have reported an average CPU frequency of 2174 MHz (9 samples)
[2026-01-09 09:33:55] 2026-01-09 14:32:48,870 | INFO     | ..............................
[2026-01-09 09:33:55] 2026-01-09 14:32:48,870 | INFO     | . Timing measurements:
[2026-01-09 09:33:55] 2026-01-09 14:32:48,870 | INFO     | . get job = 0 s
[2026-01-09 09:33:55] 2026-01-09 14:32:48,870 | INFO     | . initial setup = 2 s
[2026-01-09 09:33:55] 2026-01-09 14:32:48,870 | INFO     | . payload setup = 8 s
[2026-01-09 09:33:55] 2026-01-09 14:32:48,870 | INFO     | . stage-in = 0 s
[2026-01-09 09:33:55] 2026-01-09 14:32:48,871 | INFO     | . payload execution = 9332 s
[2026-01-09 09:33:55] 2026-01-09 14:32:48,871 | INFO     | . stage-out = 0 s
[2026-01-09 09:33:55] 2026-01-09 14:32:48,871 | INFO     | . log creation = 0 s
[2026-01-09 09:33:55] 2026-01-09 14:32:48,871 | INFO     | ..............................
[2026-01-09 09:33:55] 2026-01-09 14:32:49,395 | INFO     | 
[2026-01-09 09:33:55] 2026-01-09 14:32:49,395 | INFO     | job summary report
[2026-01-09 09:33:55] 2026-01-09 14:32:49,395 | INFO     | --------------------------------------------------
[2026-01-09 09:33:55] 2026-01-09 14:32:49,395 | INFO     | PanDA job id: 6963188650
[2026-01-09 09:33:55] 2026-01-09 14:32:49,395 | INFO     | task id: 47898826
[2026-01-09 09:33:55] 2026-01-09 14:32:49,396 | INFO     | errors: (none)
[2026-01-09 09:33:55] 2026-01-09 14:32:49,396 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 09:33:55] 2026-01-09 14:32:49,396 | INFO     | pilot state: finished 
[2026-01-09 09:33:55] 2026-01-09 14:32:49,396 | INFO     | transexitcode: 0
[2026-01-09 09:33:55] 2026-01-09 14:32:49,396 | INFO     | exeerrorcode: 0
[2026-01-09 09:33:55] 2026-01-09 14:32:49,396 | INFO     | exeerrordiag: 
[2026-01-09 09:33:55] 2026-01-09 14:32:49,397 | INFO     | exitcode: 0
[2026-01-09 09:33:55] 2026-01-09 14:32:49,397 | INFO     | exitmsg: OK
[2026-01-09 09:33:55] 2026-01-09 14:32:49,397 | INFO     | cpuconsumptiontime: 70462 s
[2026-01-09 09:33:55] 2026-01-09 14:32:49,397 | INFO     | nevents: 400
[2026-01-09 09:33:55] 2026-01-09 14:32:49,397 | INFO     | neventsw: 0
[2026-01-09 09:33:55] 2026-01-09 14:32:49,398 | INFO     | pid: 11847
[2026-01-09 09:33:55] 2026-01-09 14:32:49,398 | INFO     | pgrp: 11847
[2026-01-09 09:33:55] 2026-01-09 14:32:49,398 | INFO     | corecount: 8
[2026-01-09 09:33:55] 2026-01-09 14:32:49,398 | INFO     | event service: False
[2026-01-09 09:33:55] 2026-01-09 14:32:49,398 | INFO     | sizes: {0: 2283971, 6: 2284233, 11: 2284261, 9344: 2312597, 9345: 2321595, 9349: 2321651, 9357: 2322037}
[2026-01-09 09:33:55] 2026-01-09 14:32:49,398 | INFO     | --------------------------------------------------
[2026-01-09 09:33:55] 2026-01-09 14:32:49,399 | INFO     | 
[2026-01-09 09:33:55] 2026-01-09 14:32:49,399 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 09:33:55] 2026-01-09 14:32:49,427 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 09:33:55] 2026-01-09 14:32:49,428 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 09:33:55] 2026-01-09 14:32:49,428 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 09:33:55] 2026-01-09 14:32:49,428 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 09:33:55] 2026-01-09 14:32:49,428 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 09:33:55] 2026-01-09 14:32:49,428 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 09:33:55] 2026-01-09 14:32:49,428 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 09:33:55] 2026-01-09 14:32:49,429 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 09:33:55] 2026-01-09 14:32:49,429 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 09:33:55] 2026-01-09 14:32:49,429 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 09:33:55] 2026-01-09 14:32:49,429 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 09:33:55] 2026-01-09 14:32:49,429 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 09:33:55] 2026-01-09 14:32:49,429 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 09:33:55] 2026-01-09 14:32:49,430 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 09:33:55] 2026-01-09 14:32:49,430 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 09:33:55] 2026-01-09 14:32:49,430 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 09:33:55] 2026-01-09 14:32:49,430 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 09:33:55] 2026-01-09 14:32:49,430 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 09:33:55] 2026-01-09 14:32:49,430 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 09:33:55] 2026-01-09 14:32:49,430 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 09:33:55] 2026-01-09 14:32:49,431 | INFO     | job 6963188650 has completed (purged errors)
[2026-01-09 09:33:55] 2026-01-09 14:32:49,431 | INFO     | overall cleanup function is called
[2026-01-09 09:33:55] 2026-01-09 14:32:50,439 | INFO     | --- collectZombieJob: --- 10, [11847]
[2026-01-09 09:33:55] 2026-01-09 14:32:50,439 | INFO     | zombie collector waiting for pid 11847
[2026-01-09 09:33:55] 2026-01-09 14:32:50,440 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 09:33:55] 2026-01-09 14:32:50,440 | INFO     | collected zombie processes
[2026-01-09 09:33:55] 2026-01-09 14:32:50,440 | INFO     | will attempt to kill all subprocesses of pid=11847
[2026-01-09 09:33:55] 2026-01-09 14:32:50,524 | INFO     | process IDs to be killed: [11847] (in reverse order)
[2026-01-09 09:33:55] 2026-01-09 14:32:50,576 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 09:33:55] 2026-01-09 14:32:50,576 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 09:33:55] 2026-01-09 14:32:50,580 | INFO     | did not find any defunct processes belonging to 11847
[2026-01-09 09:33:55] 2026-01-09 14:32:50,583 | INFO     | did not find any defunct processes belonging to 11847
[2026-01-09 09:33:55] 2026-01-09 14:32:50,583 | INFO     | ready for new job
[2026-01-09 09:33:55] 2026-01-09 14:32:50,583 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 09:33:55] 2026-01-09 14:32:50,585 | INFO     | ***************************************
[2026-01-09 09:33:55] 2026-01-09 14:32:50,585 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 09:33:55] 2026-01-09 14:32:50,585 | INFO     | ***************************************
[2026-01-09 09:33:55] 2026-01-09 14:32:50,585 | INFO     | 
[2026-01-09 09:33:55] 2026-01-09 14:32:50,586 | INFO     | architecture information:
[2026-01-09 09:33:55] 2026-01-09 14:32:50,586 | INFO     | executing command: cat /etc/os-release
[2026-01-09 09:33:55] 2026-01-09 14:32:50,606 | INFO     | cat /etc/os-release:
[2026-01-09 09:33:55] NAME="CentOS Linux"
[2026-01-09 09:33:55] VERSION="7 (Core)"
[2026-01-09 09:33:55] ID="centos"
[2026-01-09 09:33:55] ID_LIKE="rhel fedora"
[2026-01-09 09:33:55] VERSION_ID="7"
[2026-01-09 09:33:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 09:33:55] ANSI_COLOR="0;31"
[2026-01-09 09:33:55] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 09:33:55] HOME_URL="https://www.centos.org/"
[2026-01-09 09:33:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 09:33:55] 
[2026-01-09 09:33:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 09:33:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 09:33:55] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 09:33:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 09:33:55] 
[2026-01-09 09:33:55] 2026-01-09 14:32:50,607 | INFO     | ***************************************
[2026-01-09 09:33:55] 2026-01-09 14:32:51,110 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 09:33:55] 2026-01-09 14:32:51,129 | INFO     | sufficient remaining disk space (18533580800 B)
[2026-01-09 09:33:55] 2026-01-09 14:32:51,130 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 09:33:55] 2026-01-09 14:32:51,130 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 09:33:55] 2026-01-09 14:32:51,130 | INFO     | update_server=False
[2026-01-09 09:33:55] 2026-01-09 14:32:51,131 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 09:33:55] 2026-01-09 14:32:51,131 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 09:33:55] 2026-01-09 14:32:51,131 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 09:33:55] 2026-01-09 14:32:51,299 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 09:33:55] 2026-01-09 14:32:51,299 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 09:33:55] 2026-01-09 14:32:51,306 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 09:33:55] 2026-01-09 14:32:51,307 | INFO     | will abort loop
[2026-01-09 09:33:55] 2026-01-09 14:32:51,667 | INFO     | all data control threads have been joined
[2026-01-09 09:33:55] 2026-01-09 14:32:52,067 | INFO     | all job control threads have been joined
[2026-01-09 09:33:55] 2026-01-09 14:32:52,109 | INFO     | all payload control threads have been joined
[2026-01-09 09:33:55] 2026-01-09 14:32:52,136 | INFO     | [job] retrieve thread has finished
[2026-01-09 09:33:55] 2026-01-09 14:32:52,310 | INFO     | [job] job monitor thread has finished
[2026-01-09 09:33:55] 2026-01-09 14:32:52,569 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 09:33:55] 2026-01-09 14:32:52,570 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 09:33:55] 2026-01-09 14:32:52,589 | INFO     | [data] copytool_in thread has finished
[2026-01-09 09:33:55] 2026-01-09 14:32:52,673 | INFO     | [data] control thread has finished
[2026-01-09 09:33:55] 2026-01-09 14:32:53,072 | INFO     | [job] control thread has finished
[2026-01-09 09:33:55] 2026-01-09 14:32:53,079 | INFO     | [payload] validate_post thread has finished
[2026-01-09 09:33:55] 2026-01-09 14:32:53,114 | INFO     | [payload] control thread has finished
[2026-01-09 09:33:55] 2026-01-09 14:32:53,137 | INFO     | [data] copytool_out thread has finished
[2026-01-09 09:33:55] 2026-01-09 14:32:53,489 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 09:33:55] 2026-01-09 14:32:53,500 | INFO     | [payload] failed_post thread has finished
[2026-01-09 09:33:55] 2026-01-09 14:32:53,557 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 09:33:55] 2026-01-09 14:32:53,585 | INFO     | [job] validate thread has finished
[2026-01-09 09:33:55] 2026-01-09 14:32:53,965 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 09:33:55] 2026-01-09 14:32:54,971 | INFO     | [job] queue monitor thread has finished
[2026-01-09 09:33:55] 2026-01-09 14:32:55,138 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 09:33:55] 2026-01-09 14:33:21,212 | INFO     | PID=5378 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-09 09:33:55] 2026-01-09 14:33:21,213 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 09:33:55] 2026-01-09 14:33:21,213 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 09:33:55] 2026-01-09 14:33:21,213 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 09:33:55] 2026-01-09 14:33:49,469 | INFO     | [monitor] cgroup control has ended
[2026-01-09 09:33:55] 2026-01-09 14:33:50,258 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140132309829440)>', '<ExcThread(monitor, started 140131419809536)>']
[2026-01-09 09:33:55] 2026-01-09 14:33:50,357 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 09:33:55] 2026-01-09 14:33:50,357 | INFO     | [monitor] control thread has ended
[2026-01-09 09:33:55] 2026-01-09 14:33:55,265 | INFO     | all workflow threads have been joined
[2026-01-09 09:33:55] 2026-01-09 14:33:55,265 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 09:33:55] 2026-01-09 14:33:55,272 | INFO     | traces error code: 0
[2026-01-09 09:33:55] 2026-01-09 14:33:55,272 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 09:33:55] 2026-01-09 14:33:55,401 [wrapper] ==== pilot stdout END ====
[2026-01-09 09:33:55] 2026-01-09 14:33:55,405 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 09:33:55] 2026-01-09 14:33:55,410 [wrapper] pilotpid: 5378
[2026-01-09 09:33:55] 2026-01-09 14:33:55,414 [wrapper] Pilot exit status: 0
[2026-01-09 09:33:55] 2026-01-09 14:33:55,434 [wrapper] pandaids: 6963188650
[2026-01-09 09:33:55] 2026-01-09 14:33:55,489 [wrapper] cleanup supervisor_pilot 13572 5379
[2026-01-09 09:33:55] 2026-01-09 14:33:55,494 [wrapper] Test setup, not cleaning
[2026-01-09 09:33:55] 2026-01-09 14:33:55,499 [wrapper] apfmon messages muted
[2026-01-09 09:33:55] 2026-01-09 14:33:55,504 [wrapper] ==== wrapper stdout END ====
[2026-01-09 09:33:55] 2026-01-09 14:33:55,508 [wrapper] ==== wrapper stderr END ====
[2026-01-09 09:33:55]  *** Error codes and diagnostics ***
[2026-01-09 09:33:55]     "exeErrorCode": 0,
[2026-01-09 09:33:55]     "exeErrorDiag": "",
[2026-01-09 09:33:55]     "pilotErrorCode": 0,
[2026-01-09 09:33:55]     "pilotErrorDiag": "",
[2026-01-09 09:33:55]  *** Listing of results directory ***
[2026-01-09 09:33:55] total 440844
[2026-01-09 09:33:55] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-09 09:33:55] -rwx------ 1 boincer umatlas     36322 Jan  8 23:25 runpilot2-wrapper.sh
[2026-01-09 09:33:55] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 23:29 queuedata.json
[2026-01-09 09:33:55] -rw-r--r-- 1 boincer umatlas       100 Jan  9 06:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 09:33:55] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 06:56 run_atlas
[2026-01-09 09:33:55] -rw-r--r-- 1 boincer umatlas       105 Jan  9 06:56 job.xml
[2026-01-09 09:33:55] -rw-r--r-- 2 boincer umatlas 224517050 Jan  9 06:56 EVNT.47898824._001448.pool.root.1
[2026-01-09 09:33:55] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 06:56 start_atlas.sh
[2026-01-09 09:33:55] drwxrwx--x 2 boincer umatlas      4096 Jan  9 06:56 shared
[2026-01-09 09:33:55] -rw-r--r-- 2 boincer umatlas    592406 Jan  9 06:56 input.tar.gz
[2026-01-09 09:33:55] -rw-r--r-- 1 boincer umatlas         0 Jan  9 06:56 boinc_lockfile
[2026-01-09 09:33:55] -rw-r--r-- 1 boincer umatlas      2520 Jan  9 06:56 pandaJob.out
[2026-01-09 09:33:55] -rw------- 1 boincer umatlas        57 Jan  9 06:56 setup.sh.local
[2026-01-09 09:33:55] -rw------- 1 boincer umatlas    989377 Jan  9 06:56 agis_schedconf.cvmfs.json
[2026-01-09 09:33:55] -rw------- 1 boincer umatlas   1516240 Jan  9 06:56 agis_ddmendpoints.agis.ALL.json
[2026-01-09 09:33:55] drwx------ 5 boincer umatlas      4096 Jan  9 06:56 pilot3
[2026-01-09 09:33:55] -rw-r--r-- 1 boincer umatlas      5908 Jan  9 09:30 init_data.xml
[2026-01-09 09:33:55] -rw------- 1 boincer umatlas 219582479 Jan  9 09:32 HITS.47898826._037737.pool.root.1
[2026-01-09 09:33:55] -rw-r--r-- 1 boincer umatlas       529 Jan  9 09:32 boinc_task_state.xml
[2026-01-09 09:33:55] -rw------- 1 boincer umatlas      1046 Jan  9 09:32 memory_monitor_summary.json
[2026-01-09 09:33:55] -rw------- 1 boincer umatlas    395681 Jan  9 09:32 log.47898826._037737.job.log.tgz.1
[2026-01-09 09:33:55] -rw------- 1 boincer umatlas        95 Jan  9 09:32 pilot_heartbeat.json
[2026-01-09 09:33:55] -rw------- 1 boincer umatlas      7844 Jan  9 09:32 heartbeat.json
[2026-01-09 09:33:55] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 09:33 boinc_mmap_file
[2026-01-09 09:33:55] -rw-r--r-- 1 boincer umatlas        27 Jan  9 09:33 wrapper_checkpoint.txt
[2026-01-09 09:33:55] -rw------- 1 boincer umatlas      4931 Jan  9 09:33 pilotlog.txt
[2026-01-09 09:33:55] -rw------- 1 boincer umatlas   1309185 Jan  9 09:33 log.47898826._037737.job.log.1
[2026-01-09 09:33:55] -rw------- 1 boincer umatlas       357 Jan  9 09:33 output.list
[2026-01-09 09:33:55] -rw-r--r-- 1 boincer umatlas       620 Jan  9 09:33 runtime_log
[2026-01-09 09:33:55] -rw------- 1 boincer umatlas   1720320 Jan  9 09:33 result.tar.gz
[2026-01-09 09:33:55] -rw------- 1 boincer umatlas       659 Jan  9 09:33 sVFODm8EJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmqKmKDmWq3Fqm.diag
[2026-01-09 09:33:55] -rw-r--r-- 1 boincer umatlas      9337 Jan  9 09:33 runtime_log.err
[2026-01-09 09:33:55] -rw-r--r-- 1 boincer umatlas     21286 Jan  9 09:33 stderr.txt
[2026-01-09 09:33:55] HITS file was successfully produced:
[2026-01-09 09:33:55] -rw------- 1 boincer umatlas 219582479 Jan  9 09:32 shared/HITS.pool.root.1
[2026-01-09 09:33:55]  *** Contents of shared directory: ***
[2026-01-09 09:33:55] total 435980
[2026-01-09 09:33:55] -rw-r--r-- 2 boincer umatlas 224517050 Jan  9 06:56 ATLAS.root_0
[2026-01-09 09:33:55] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 06:56 start_atlas.sh
[2026-01-09 09:33:55] -rw-r--r-- 2 boincer umatlas    592406 Jan  9 06:56 input.tar.gz
[2026-01-09 09:33:55] -rw------- 1 boincer umatlas 219582479 Jan  9 09:32 HITS.pool.root.1
[2026-01-09 09:33:55] -rw------- 1 boincer umatlas   1720320 Jan  9 09:33 result.tar.gz
09:33:57 (1178): run_atlas exited; CPU time 70409.810573
09:33:57 (1178): called boinc_finish(0)

</stderr_txt>
]]>

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