Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:21:36 (14205): wrapper (7.7.26015): starting
15:21:36 (14205): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 15:21:36] Arguments: --nthreads 8
[2026-01-09 15:21:36] Threads: 8
[2026-01-09 15:21:36] Checking for CVMFS
[2026-01-09 15:21:36] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 15:21:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 15:21:36] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 15:21:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 15:21:36] 2.11.2.0 18312 35527 97424 154946 0 56 22947080 25165824 0 130560 0 15287594 99.841 9648593 3413 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 15:21:36] CVMFS is ok
[2026-01-09 15:21:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 15:21:37] Checking for apptainer binary...
[2026-01-09 15:21:37] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 15:21:37] Running /usr/bin/apptainer --version
[2026-01-09 15:21:37] apptainer version 1.3.2-1.el7
[2026-01-09 15:21:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 15:21:38] cg-vwn442.simple-grid.lan
[2026-01-09 15:21:38] apptainer works
[2026-01-09 15:21:38] Set ATHENA_PROC_NUMBER=8
[2026-01-09 15:21:38] Set ATHENA_CORE_NUMBER=8
[2026-01-09 15:21:38] Starting ATLAS job with PandaID=6963187351
[2026-01-09 15:21:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 18:12:15]  *** The last 200 lines of the pilot log: ***
[2026-01-09 18:12:15] 2026-01-09 17:11:07,793 | INFO     | executing command: lscpu
[2026-01-09 18:12:15] 2026-01-09 17:11:07,817 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 18:12:15] 2026-01-09 17:11:08,774 | INFO     | monitor loop #690: job 0:6963187351 is in state 'finished'
[2026-01-09 18:12:15] 2026-01-09 17:11:08,775 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 18:12:15] 2026-01-09 17:11:08,914 | INFO     | time since job start (10155s) is within the limit (349056.0s)
[2026-01-09 18:12:15] 2026-01-09 17:11:10,919 | INFO     | time since job start (10157s) is within the limit (349056.0s)
[2026-01-09 18:12:15] 2026-01-09 17:11:11,278 | INFO     | monitor loop #691: job 0:6963187351 is in state 'finished'
[2026-01-09 18:12:15] 2026-01-09 17:11:11,278 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 18:12:15] 2026-01-09 17:11:12,571 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 18:12:15] 2026-01-09 17:11:12,572 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 18:12:15] 2026-01-09 17:11:12,574 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6963187351/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 18:12:15] 2026-01-09 17:11:12,575 | INFO     | extracted standard info from prmon json
[2026-01-09 18:12:15] 2026-01-09 17:11:12,575 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 18:12:15] 2026-01-09 17:11:12,576 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 18:12:15] 2026-01-09 17:11:12,576 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 18:12:15] 2026-01-09 17:11:12,576 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 18:12:15] 2026-01-09 17:11:12,580 | INFO     | fitting pss+swap vs Time
[2026-01-09 18:12:15] 2026-01-09 17:11:12,580 | INFO     | sum of square deviations: 1418361477.5
[2026-01-09 18:12:15] 2026-01-09 17:11:12,582 | INFO     | sum of deviations: -7304255228.999999
[2026-01-09 18:12:15] 2026-01-09 17:11:12,582 | INFO     | mean x: 1767973575.5
[2026-01-09 18:12:15] 2026-01-09 17:11:12,582 | INFO     | mean y: 2536422.8192771086
[2026-01-09 18:12:15] 2026-01-09 17:11:12,582 | INFO     | intersect: 9107218436.843943
[2026-01-09 18:12:15] 2026-01-09 17:11:12,582 | INFO     | chi2: 1.6943386636347857
[2026-01-09 18:12:15] 2026-01-09 17:11:12,583 | INFO     | sum of square deviations: 1294014960.0
[2026-01-09 18:12:15] 2026-01-09 17:11:12,584 | INFO     | sum of deviations: -6778901512.999999
[2026-01-09 18:12:15] 2026-01-09 17:11:12,584 | INFO     | mean x: 1767973423.0
[2026-01-09 18:12:15] 2026-01-09 17:11:12,584 | INFO     | mean y: 2537068.136645963
[2026-01-09 18:12:15] 2026-01-09 17:11:12,585 | INFO     | intersect: 9264344761.70341
[2026-01-09 18:12:15] 2026-01-09 17:11:12,585 | INFO     | chi2: 1.693961860187139
[2026-01-09 18:12:15] 2026-01-09 17:11:12,585 | INFO     | current chi2=1.693961860187139 (change=0.02223896885162561 %)
[2026-01-09 18:12:15] 2026-01-09 17:11:12,586 | INFO     | right removable region: 160
[2026-01-09 18:12:15] 2026-01-09 17:11:12,586 | INFO     | sum of square deviations: 1294014960.0
[2026-01-09 18:12:15] 2026-01-09 17:11:12,587 | INFO     | sum of deviations: -33080434200.0
[2026-01-09 18:12:15] 2026-01-09 17:11:12,587 | INFO     | mean x: 1767973728.0
[2026-01-09 18:12:15] 2026-01-09 17:11:12,587 | INFO     | mean y: 2567604.416149068
[2026-01-09 18:12:15] 2026-01-09 17:11:12,588 | INFO     | intersect: 45199370102.304344
[2026-01-09 18:12:15] 2026-01-09 17:11:12,588 | INFO     | chi2: 0.17672584487460283
[2026-01-09 18:12:15] 2026-01-09 17:11:12,588 | INFO     | current chi2=0.17672584487460283 (change=89.56962685986986 %)
[2026-01-09 18:12:15] 2026-01-09 17:11:12,588 | INFO     | sum of square deviations: 1177156955.0
[2026-01-09 18:12:15] 2026-01-09 17:11:12,589 | INFO     | sum of deviations: -32495687315.499996
[2026-01-09 18:12:15] 2026-01-09 17:11:12,590 | INFO     | mean x: 1767973880.5
[2026-01-09 18:12:15] 2026-01-09 17:11:12,590 | INFO     | mean y: 2566769.737179487
[2026-01-09 18:12:15] 2026-01-09 17:11:12,590 | INFO     | intersect: 48807890612.63896
[2026-01-09 18:12:15] 2026-01-09 17:11:12,590 | INFO     | chi2: 0.15535090215159622
[2026-01-09 18:12:15] 2026-01-09 17:11:12,590 | INFO     | current chi2=0.15535090215159622 (change=12.094972717868945 %)
[2026-01-09 18:12:15] 2026-01-09 17:11:12,590 | INFO     | left removable region: 20
[2026-01-09 18:12:15] 2026-01-09 17:11:12,591 | INFO     | sum of square deviations: 850825255.0
[2026-01-09 18:12:15] 2026-01-09 17:11:12,592 | INFO     | sum of deviations: -22279703043.500004
[2026-01-09 18:12:15] 2026-01-09 17:11:12,592 | INFO     | mean x: 1767974002.5
[2026-01-09 18:12:15] 2026-01-09 17:11:12,592 | INFO     | mean y: 2555127.535714286
[2026-01-09 18:12:15] 2026-01-09 17:11:12,592 | INFO     | intersect: 46298707636.934525
[2026-01-09 18:12:15] 2026-01-09 17:11:12,592 | INFO     | chi2: 0.14137016193596225
[2026-01-09 18:12:15] 2026-01-09 17:11:12,593 | INFO     | current memory leak: -26.19 B/s (using 140 data points, chi2=0.14)
[2026-01-09 18:12:15] 2026-01-09 17:11:12,593 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-01-09 18:12:15] 2026-01-09 17:11:12,594 | INFO     | ..............................
[2026-01-09 18:12:15] 2026-01-09 17:11:12,594 | INFO     | . Timing measurements:
[2026-01-09 18:12:15] 2026-01-09 17:11:12,594 | INFO     | . get job = 0 s
[2026-01-09 18:12:15] 2026-01-09 17:11:12,594 | INFO     | . initial setup = 2 s
[2026-01-09 18:12:15] 2026-01-09 17:11:12,594 | INFO     | . payload setup = 7 s
[2026-01-09 18:12:15] 2026-01-09 17:11:12,594 | INFO     | . stage-in = 0 s
[2026-01-09 18:12:15] 2026-01-09 17:11:12,594 | INFO     | . payload execution = 10124 s
[2026-01-09 18:12:15] 2026-01-09 17:11:12,594 | INFO     | . stage-out = 1 s
[2026-01-09 18:12:15] 2026-01-09 17:11:12,594 | INFO     | . log creation = 0 s
[2026-01-09 18:12:15] 2026-01-09 17:11:12,595 | INFO     | ..............................
[2026-01-09 18:12:15] 2026-01-09 17:11:12,711 | INFO     | 
[2026-01-09 18:12:15] 2026-01-09 17:11:12,711 | INFO     | job summary report
[2026-01-09 18:12:15] 2026-01-09 17:11:12,712 | INFO     | --------------------------------------------------
[2026-01-09 18:12:15] 2026-01-09 17:11:12,712 | INFO     | PanDA job id: 6963187351
[2026-01-09 18:12:15] 2026-01-09 17:11:12,712 | INFO     | task id: 47898826
[2026-01-09 18:12:15] 2026-01-09 17:11:12,712 | INFO     | errors: (none)
[2026-01-09 18:12:15] 2026-01-09 17:11:12,712 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 18:12:15] 2026-01-09 17:11:12,712 | INFO     | pilot state: finished 
[2026-01-09 18:12:15] 2026-01-09 17:11:12,712 | INFO     | transexitcode: 0
[2026-01-09 18:12:15] 2026-01-09 17:11:12,712 | INFO     | exeerrorcode: 0
[2026-01-09 18:12:15] 2026-01-09 17:11:12,712 | INFO     | exeerrordiag: 
[2026-01-09 18:12:15] 2026-01-09 17:11:12,713 | INFO     | exitcode: 0
[2026-01-09 18:12:15] 2026-01-09 17:11:12,713 | INFO     | exitmsg: OK
[2026-01-09 18:12:15] 2026-01-09 17:11:12,713 | INFO     | cpuconsumptiontime: 77074 s
[2026-01-09 18:12:15] 2026-01-09 17:11:12,713 | INFO     | nevents: 400
[2026-01-09 18:12:15] 2026-01-09 17:11:12,713 | INFO     | neventsw: 0
[2026-01-09 18:12:15] 2026-01-09 17:11:12,713 | INFO     | pid: 24413
[2026-01-09 18:12:15] 2026-01-09 17:11:12,713 | INFO     | pgrp: 24413
[2026-01-09 18:12:15] 2026-01-09 17:11:12,713 | INFO     | corecount: 8
[2026-01-09 18:12:15] 2026-01-09 17:11:12,713 | INFO     | event service: False
[2026-01-09 18:12:15] 2026-01-09 17:11:12,713 | INFO     | sizes: {0: 2283798, 1: 2283997, 6: 2284259, 12: 2284287, 10135: 2312722, 10136: 2312721, 10137: 2321903, 10138: 2321959, 10144: 2322217}
[2026-01-09 18:12:15] 2026-01-09 17:11:12,714 | INFO     | --------------------------------------------------
[2026-01-09 18:12:15] 2026-01-09 17:11:12,714 | INFO     | 
[2026-01-09 18:12:15] 2026-01-09 17:11:12,714 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-01-09 18:12:15] 2026-01-09 17:11:12,737 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 18:12:15] 2026-01-09 17:11:12,737 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 18:12:15] 2026-01-09 17:11:12,737 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 18:12:15] 2026-01-09 17:11:12,737 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 18:12:15] 2026-01-09 17:11:12,738 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 18:12:15] 2026-01-09 17:11:12,738 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 18:12:15] 2026-01-09 17:11:12,738 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 18:12:15] 2026-01-09 17:11:12,738 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 18:12:15] 2026-01-09 17:11:12,738 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 18:12:15] 2026-01-09 17:11:12,738 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 18:12:15] 2026-01-09 17:11:12,738 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 18:12:15] 2026-01-09 17:11:12,738 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 18:12:15] 2026-01-09 17:11:12,738 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 18:12:15] 2026-01-09 17:11:12,739 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 18:12:15] 2026-01-09 17:11:12,739 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 18:12:15] 2026-01-09 17:11:12,739 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 18:12:15] 2026-01-09 17:11:12,739 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 18:12:15] 2026-01-09 17:11:12,739 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 18:12:15] 2026-01-09 17:11:12,739 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 18:12:15] 2026-01-09 17:11:12,739 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 18:12:15] 2026-01-09 17:11:12,739 | INFO     | job 6963187351 has completed (purged errors)
[2026-01-09 18:12:15] 2026-01-09 17:11:12,740 | INFO     | overall cleanup function is called
[2026-01-09 18:12:15] 2026-01-09 17:11:13,748 | INFO     | --- collectZombieJob: --- 10, [24413]
[2026-01-09 18:12:15] 2026-01-09 17:11:13,748 | INFO     | zombie collector waiting for pid 24413
[2026-01-09 18:12:15] 2026-01-09 17:11:13,748 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 18:12:15] 2026-01-09 17:11:13,748 | INFO     | collected zombie processes
[2026-01-09 18:12:15] 2026-01-09 17:11:13,748 | INFO     | will attempt to kill all subprocesses of pid=24413
[2026-01-09 18:12:15] 2026-01-09 17:11:13,811 | INFO     | process IDs to be killed: [24413] (in reverse order)
[2026-01-09 18:12:15] 2026-01-09 17:11:13,856 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 18:12:15] 2026-01-09 17:11:13,856 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 18:12:15] 2026-01-09 17:11:13,859 | INFO     | did not find any defunct processes belonging to 24413
[2026-01-09 18:12:15] 2026-01-09 17:11:13,860 | INFO     | did not find any defunct processes belonging to 24413
[2026-01-09 18:12:15] 2026-01-09 17:11:13,860 | INFO     | ready for new job
[2026-01-09 18:12:15] 2026-01-09 17:11:13,861 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 18:12:15] 2026-01-09 17:11:13,862 | INFO     | ***************************************
[2026-01-09 18:12:15] 2026-01-09 17:11:13,863 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 18:12:15] 2026-01-09 17:11:13,863 | INFO     | ***************************************
[2026-01-09 18:12:15] 2026-01-09 17:11:13,863 | INFO     | 
[2026-01-09 18:12:15] 2026-01-09 17:11:13,863 | INFO     | pilot is running in a VM
[2026-01-09 18:12:15] 2026-01-09 17:11:13,864 | INFO     | architecture information:
[2026-01-09 18:12:15] 2026-01-09 17:11:13,864 | INFO     | executing command: cat /etc/os-release
[2026-01-09 18:12:15] 2026-01-09 17:11:13,880 | INFO     | cat /etc/os-release:
[2026-01-09 18:12:15] NAME="CentOS Linux"
[2026-01-09 18:12:15] VERSION="7 (Core)"
[2026-01-09 18:12:15] ID="centos"
[2026-01-09 18:12:15] ID_LIKE="rhel fedora"
[2026-01-09 18:12:15] VERSION_ID="7"
[2026-01-09 18:12:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 18:12:15] ANSI_COLOR="0;31"
[2026-01-09 18:12:15] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 18:12:15] HOME_URL="https://www.centos.org/"
[2026-01-09 18:12:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 18:12:15] 
[2026-01-09 18:12:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 18:12:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 18:12:15] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 18:12:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 18:12:15] 
[2026-01-09 18:12:15] 2026-01-09 17:11:13,881 | INFO     | ***************************************
[2026-01-09 18:12:15] 2026-01-09 17:11:14,384 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-01-09 18:12:15] 2026-01-09 17:11:14,403 | INFO     | sufficient remaining disk space (498110300160 B)
[2026-01-09 18:12:15] 2026-01-09 17:11:14,403 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 18:12:15] 2026-01-09 17:11:14,403 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 18:12:15] 2026-01-09 17:11:14,403 | INFO     | update_server=False
[2026-01-09 18:12:15] 2026-01-09 17:11:14,404 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 18:12:15] 2026-01-09 17:11:14,404 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 18:12:15] 2026-01-09 17:11:14,404 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 18:12:15] 2026-01-09 17:11:14,554 | INFO     | all payload control threads have been joined
[2026-01-09 18:12:15] 2026-01-09 17:11:14,594 | INFO     | all job control threads have been joined
[2026-01-09 18:12:15] 2026-01-09 17:11:14,787 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 18:12:15] 2026-01-09 17:11:14,787 | INFO     | aborting loop
[2026-01-09 18:12:15] 2026-01-09 17:11:15,335 | INFO     | all data control threads have been joined
[2026-01-09 18:12:15] 2026-01-09 17:11:15,409 | INFO     | [job] retrieve thread has finished
[2026-01-09 18:12:15] 2026-01-09 17:11:15,410 | INFO     | [job] queue monitor thread has finished
[2026-01-09 18:12:15] 2026-01-09 17:11:15,455 | INFO     | [payload] failed_post thread has finished
[2026-01-09 18:12:15] 2026-01-09 17:11:15,560 | INFO     | [payload] control thread has finished
[2026-01-09 18:12:15] 2026-01-09 17:11:15,600 | INFO     | [job] control thread has finished
[2026-01-09 18:12:15] 2026-01-09 17:11:15,640 | INFO     | [job] validate thread has finished
[2026-01-09 18:12:15] 2026-01-09 17:11:15,793 | INFO     | [job] job monitor thread has finished
[2026-01-09 18:12:15] 2026-01-09 17:11:15,960 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 18:12:15] 2026-01-09 17:11:16,263 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 18:12:15] 2026-01-09 17:11:16,341 | INFO     | [data] control thread has finished
[2026-01-09 18:12:15] 2026-01-09 17:11:16,410 | INFO     | [data] copytool_out thread has finished
[2026-01-09 18:12:15] 2026-01-09 17:11:16,492 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 18:12:15] 2026-01-09 17:11:16,880 | INFO     | [data] copytool_in thread has finished
[2026-01-09 18:12:15] 2026-01-09 17:11:16,961 | INFO     | [payload] validate_post thread has finished
[2026-01-09 18:12:15] 2026-01-09 17:11:17,393 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 18:12:15] 2026-01-09 17:11:21,401 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 18:12:15] 2026-01-09 17:11:25,335 | INFO     | job.realtimelogging is not enabled
[2026-01-09 18:12:15] 2026-01-09 17:11:26,341 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 18:12:15] 2026-01-09 17:11:44,046 | INFO     | PID=17952 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 18:12:15] 2026-01-09 17:11:44,046 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 18:12:15] 2026-01-09 17:11:44,047 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 18:12:15] 2026-01-09 17:11:44,047 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 18:12:15] 2026-01-09 17:12:09,545 | INFO     | [monitor] cgroup control has ended
[2026-01-09 18:12:15] 2026-01-09 17:12:09,674 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140387059873600)>', '<ExcThread(monitor, started 140386592855808)>']
[2026-01-09 18:12:15] 2026-01-09 17:12:10,120 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 18:12:15] 2026-01-09 17:12:10,120 | INFO     | [monitor] control thread has ended
[2026-01-09 18:12:15] 2026-01-09 17:12:14,700 | INFO     | all workflow threads have been joined
[2026-01-09 18:12:15] 2026-01-09 17:12:14,700 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 18:12:15] 2026-01-09 17:12:14,700 | INFO     | traces error code: 0
[2026-01-09 18:12:15] 2026-01-09 17:12:14,701 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 18:12:15] 2026-01-09 17:12:14,849 [wrapper] ==== pilot stdout END ====
[2026-01-09 18:12:15] 2026-01-09 17:12:14,853 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 18:12:15] 2026-01-09 17:12:14,857 [wrapper] pilotpid: 17952
[2026-01-09 18:12:15] 2026-01-09 17:12:14,860 [wrapper] Pilot exit status: 0
[2026-01-09 18:12:15] 2026-01-09 17:12:14,875 [wrapper] pandaids: 6963187351
[2026-01-09 18:12:15] 2026-01-09 17:12:14,912 [wrapper] cleanup supervisor_pilot  9084 17953
[2026-01-09 18:12:15] 2026-01-09 17:12:14,917 [wrapper] Test setup, not cleaning
[2026-01-09 18:12:15] 2026-01-09 17:12:14,920 [wrapper] apfmon messages muted
[2026-01-09 18:12:15] 2026-01-09 17:12:14,924 [wrapper] ==== wrapper stdout END ====
[2026-01-09 18:12:15] 2026-01-09 17:12:14,927 [wrapper] ==== wrapper stderr END ====
[2026-01-09 18:12:15]  *** Error codes and diagnostics ***
[2026-01-09 18:12:15]     "exeErrorCode": 0,
[2026-01-09 18:12:15]     "exeErrorDiag": "",
[2026-01-09 18:12:15]     "pilotErrorCode": 0,
[2026-01-09 18:12:15]     "pilotErrorDiag": "",
[2026-01-09 18:12:15]  *** Listing of results directory ***
[2026-01-09 18:12:15] total 442616
[2026-01-09 18:12:15] -rw-r--r--. 1 boinc boinc    579449 Jan  9 05:21 pilot3.tar.gz
[2026-01-09 18:12:15] -rwx------. 1 boinc boinc     36322 Jan  9 05:25 runpilot2-wrapper.sh
[2026-01-09 18:12:15] -rw-r--r--. 1 boinc boinc      5112 Jan  9 05:29 queuedata.json
[2026-01-09 18:12:15] -rw-r--r--. 1 boinc boinc       100 Jan  9 15:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 18:12:15] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 15:21 run_atlas
[2026-01-09 18:12:15] -rw-r--r--. 1 boinc boinc       105 Jan  9 15:21 job.xml
[2026-01-09 18:12:15] -rw-r--r--. 1 boinc boinc      6391 Jan  9 15:21 init_data.xml
[2026-01-09 18:12:15] -rw-r--r--. 2 boinc boinc 224270838 Jan  9 15:21 EVNT.47898824._001428.pool.root.1
[2026-01-09 18:12:15] -rw-r--r--. 2 boinc boinc     15847 Jan  9 15:21 start_atlas.sh
[2026-01-09 18:12:15] drwxrwx--x. 2 boinc boinc        68 Jan  9 15:21 shared
[2026-01-09 18:12:15] -rw-r--r--. 2 boinc boinc    592402 Jan  9 15:21 input.tar.gz
[2026-01-09 18:12:15] -rw-r--r--. 1 boinc boinc         0 Jan  9 15:21 boinc_lockfile
[2026-01-09 18:12:15] -rw-r--r--. 1 boinc boinc      2519 Jan  9 15:21 pandaJob.out
[2026-01-09 18:12:15] -rw-------. 1 boinc boinc    989377 Jan  9 15:21 agis_schedconf.cvmfs.json
[2026-01-09 18:12:15] -rw-------. 1 boinc boinc   1516240 Jan  9 15:21 agis_ddmendpoints.agis.ALL.json
[2026-01-09 18:12:15] drwx------. 5 boinc boinc      4096 Jan  9 15:21 pilot3
[2026-01-09 18:12:15] -rw-------. 1 boinc boinc 221585834 Jan  9 18:10 HITS.47898826._037225.pool.root.1
[2026-01-09 18:12:15] -rw-r--r--. 1 boinc boinc       531 Jan  9 18:10 boinc_task_state.xml
[2026-01-09 18:12:15] -rw-------. 1 boinc boinc      1014 Jan  9 18:11 memory_monitor_summary.json
[2026-01-09 18:12:15] -rw-------. 1 boinc boinc        95 Jan  9 18:11 pilot_heartbeat.json
[2026-01-09 18:12:15] -rw-------. 1 boinc boinc    383491 Jan  9 18:11 log.47898826._037225.job.log.tgz.1
[2026-01-09 18:12:15] -rw-------. 1 boinc boinc      7779 Jan  9 18:11 heartbeat.json
[2026-01-09 18:12:15] -rw-r--r--. 1 boinc boinc      8192 Jan  9 18:11 boinc_mmap_file
[2026-01-09 18:12:15] -rw-r--r--. 1 boinc boinc        28 Jan  9 18:11 wrapper_checkpoint.txt
[2026-01-09 18:12:15] -rw-------. 1 boinc boinc      4881 Jan  9 18:12 pilotlog.txt
[2026-01-09 18:12:15] -rw-------. 1 boinc boinc   1359304 Jan  9 18:12 log.47898826._037225.job.log.1
[2026-01-09 18:12:15] -rw-------. 1 boinc boinc       357 Jan  9 18:12 output.list
[2026-01-09 18:12:15] -rw-r--r--. 1 boinc boinc       620 Jan  9 18:12 runtime_log
[2026-01-09 18:12:15] -rw-------. 1 boinc boinc   1761280 Jan  9 18:12 result.tar.gz
[2026-01-09 18:12:15] -rw-r--r--. 1 boinc boinc      8817 Jan  9 18:12 runtime_log.err
[2026-01-09 18:12:15] -rw-------. 1 boinc boinc       655 Jan  9 18:12 2AFMDmvEJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmAJmKDmsBQjQm.diag
[2026-01-09 18:12:15] -rw-r--r--. 1 boinc boinc     21035 Jan  9 18:12 stderr.txt
[2026-01-09 18:12:15] HITS file was successfully produced:
[2026-01-09 18:12:15] -rw-------. 1 boinc boinc 221585834 Jan  9 18:10 shared/HITS.pool.root.1
[2026-01-09 18:12:15]  *** Contents of shared directory: ***
[2026-01-09 18:12:15] total 437728
[2026-01-09 18:12:15] -rw-r--r--. 2 boinc boinc 224270838 Jan  9 15:21 ATLAS.root_0
[2026-01-09 18:12:15] -rw-r--r--. 2 boinc boinc     15847 Jan  9 15:21 start_atlas.sh
[2026-01-09 18:12:15] -rw-r--r--. 2 boinc boinc    592402 Jan  9 15:21 input.tar.gz
[2026-01-09 18:12:15] -rw-------. 1 boinc boinc 221585834 Jan  9 18:10 HITS.pool.root.1
[2026-01-09 18:12:15] -rw-------. 1 boinc boinc   1761280 Jan  9 18:12 result.tar.gz
18:12:16 (14205): run_atlas exited; CPU time 77143.346746
18:12:16 (14205): called boinc_finish(0)

</stderr_txt>
]]>

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