Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:08:35 (2337397): wrapper (7.7.26015): starting
07:08:35 (2337397): wrapper: running run_atlas (--nthreads 9)
[2026-01-09 07:08:35] Arguments: --nthreads 9
[2026-01-09 07:08:35] Threads: 9
[2026-01-09 07:08:35] Checking for CVMFS
[2026-01-09 07:08:36] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 07:08:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 07:08:36] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 07:08:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 07:08:37] 2.13.3.0 12548 93388 391704 154942 3 269 32695191 40960001 9028 16776704 34 388532642 99.608 403636324 36437 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 07:08:37] CVMFS is ok
[2026-01-09 07:08:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 07:08:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 07:08:37] Further information can be found at the LHC@home message board.
[2026-01-09 07:08:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 07:08:37] Checking for apptainer binary...
[2026-01-09 07:08:37] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 07:08:37] Running /usr/bin/apptainer --version
[2026-01-09 07:08:38] apptainer version 1.4.5-2.el9
[2026-01-09 07:08:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 07:08:39] c7-11-12.aglt2.org
[2026-01-09 07:08:39] apptainer works
[2026-01-09 07:08:39] Set ATHENA_PROC_NUMBER=9
[2026-01-09 07:08:39] Set ATHENA_CORE_NUMBER=9
[2026-01-09 07:08:39] Starting ATLAS job with PandaID=6963161668
[2026-01-09 07:08:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 12:32:01]  *** The last 200 lines of the pilot log: ***
[2026-01-09 12:32:01] 2026-01-09 17:30:55,371 | INFO     | time since job start (19233s) is within the limit (349056.0s)
[2026-01-09 12:32:01] 2026-01-09 17:30:55,814 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 12:32:01] 2026-01-09 17:30:55,818 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3292.63840625
[2026-01-09 12:32:01] 2026-01-09 17:30:55,829 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6963161668/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 12:32:01] 2026-01-09 17:30:55,830 | INFO     | extracted standard info from prmon json
[2026-01-09 12:32:01] 2026-01-09 17:30:55,830 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 12:32:01] 2026-01-09 17:30:55,830 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 12:32:01] 2026-01-09 17:30:55,831 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 12:32:01] 2026-01-09 17:30:55,831 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 12:32:01] 2026-01-09 17:30:55,834 | INFO     | fitting pss+swap vs Time
[2026-01-09 12:32:01] 2026-01-09 17:30:55,835 | INFO     | sum of square deviations: 9417191138.87179
[2026-01-09 12:32:01] 2026-01-09 17:30:55,837 | INFO     | sum of deviations: 181086728295.6028
[2026-01-09 12:32:01] 2026-01-09 17:30:55,837 | INFO     | mean x: 1767970292.628205
[2026-01-09 12:32:01] 2026-01-09 17:30:55,837 | INFO     | mean y: 2502106.7724358975
[2026-01-09 12:32:01] 2026-01-09 17:30:55,837 | INFO     | intersect: -33994466978.23829
[2026-01-09 12:32:01] 2026-01-09 17:30:55,837 | INFO     | chi2: 6.462768556000019
[2026-01-09 12:32:01] 2026-01-09 17:30:55,838 | INFO     | sum of square deviations: 8971650798.788239
[2026-01-09 12:32:01] 2026-01-09 17:30:55,840 | INFO     | sum of deviations: 197337117888.48523
[2026-01-09 12:32:01] 2026-01-09 17:30:55,840 | INFO     | mean x: 1767970140.1302931
[2026-01-09 12:32:01] 2026-01-09 17:30:55,840 | INFO     | mean y: 2507580.1628664494
[2026-01-09 12:32:01] 2026-01-09 17:30:55,840 | INFO     | intersect: -38885110740.12842
[2026-01-09 12:32:01] 2026-01-09 17:30:55,840 | INFO     | chi2: 5.810667465354362
[2026-01-09 12:32:01] 2026-01-09 17:30:55,840 | INFO     | current chi2=5.810667465354362 (change=10.090119814676763 %)
[2026-01-09 12:32:01] 2026-01-09 17:30:55,840 | INFO     | right removable region: 306
[2026-01-09 12:32:01] 2026-01-09 17:30:55,841 | INFO     | sum of square deviations: 8971626398.788242
[2026-01-09 12:32:01] 2026-01-09 17:30:55,843 | INFO     | sum of deviations: 72555119657.26398
[2026-01-09 12:32:01] 2026-01-09 17:30:55,843 | INFO     | mean x: 1767970445.1302931
[2026-01-09 12:32:01] 2026-01-09 17:30:55,843 | INFO     | mean y: 2539229.068403909
[2026-01-09 12:32:01] 2026-01-09 17:30:55,843 | INFO     | intersect: -14295348522.28293
[2026-01-09 12:32:01] 2026-01-09 17:30:55,843 | INFO     | chi2: 2.002563965721357
[2026-01-09 12:32:01] 2026-01-09 17:30:55,843 | INFO     | current chi2=2.002563965721357 (change=69.01383751608773 %)
[2026-01-09 12:32:01] 2026-01-09 17:30:55,843 | INFO     | sum of square deviations: 8540359478.463602
[2026-01-09 12:32:01] 2026-01-09 17:30:55,846 | INFO     | sum of deviations: 19957255481.3907
[2026-01-09 12:32:01] 2026-01-09 17:30:55,846 | INFO     | mean x: 1767970597.6291392
[2026-01-09 12:32:01] 2026-01-09 17:30:55,846 | INFO     | mean y: 2557745.3874172186
[2026-01-09 12:32:01] 2026-01-09 17:30:55,846 | INFO     | intersect: -4128865643.69213
[2026-01-09 12:32:01] 2026-01-09 17:30:55,846 | INFO     | chi2: 0.7987789354812899
[2026-01-09 12:32:01] 2026-01-09 17:30:55,846 | INFO     | current chi2=0.7987789354812899 (change=60.112188716351135 %)
[2026-01-09 12:32:01] 2026-01-09 17:30:55,847 | INFO     | sum of square deviations: 8123158242.390584
[2026-01-09 12:32:01] 2026-01-09 17:30:55,848 | INFO     | sum of deviations: 7570629346.2020035
[2026-01-09 12:32:01] 2026-01-09 17:30:55,849 | INFO     | mean x: 1767970750.1245792
[2026-01-09 12:32:01] 2026-01-09 17:30:55,849 | INFO     | mean y: 2562260.616161616
[2026-01-09 12:32:01] 2026-01-09 17:30:55,849 | INFO     | intersect: -1645152931.520845
[2026-01-09 12:32:01] 2026-01-09 17:30:55,849 | INFO     | chi2: 0.7457381877878374
[2026-01-09 12:32:01] 2026-01-09 17:30:55,849 | INFO     | current chi2=0.7457381877878374 (change=6.640228646176519 %)
[2026-01-09 12:32:01] 2026-01-09 17:30:55,849 | INFO     | left removable region: 30
[2026-01-09 12:32:01] 2026-01-09 17:30:55,849 | INFO     | sum of square deviations: 6518982252.811578
[2026-01-09 12:32:01] 2026-01-09 17:30:55,851 | INFO     | sum of deviations: 15758392206.188414
[2026-01-09 12:32:01] 2026-01-09 17:30:55,851 | INFO     | mean x: 1767971024.6231885
[2026-01-09 12:32:01] 2026-01-09 17:30:55,851 | INFO     | mean y: 2572852.3768115942
[2026-01-09 12:32:01] 2026-01-09 17:30:55,851 | INFO     | intersect: -4271158803.078006
[2026-01-09 12:32:01] 2026-01-09 17:30:55,852 | INFO     | chi2: 0.0032487376271886294
[2026-01-09 12:32:01] 2026-01-09 17:30:55,852 | INFO     | current memory leak: 2.42 B/s (using 276 data points, chi2=0.00)
[2026-01-09 12:32:01] 2026-01-09 17:30:55,852 | INFO     | could have reported an average CPU frequency of 3287 MHz (14 samples)
[2026-01-09 12:32:01] 2026-01-09 17:30:55,853 | INFO     | ..............................
[2026-01-09 12:32:01] 2026-01-09 17:30:55,853 | INFO     | . Timing measurements:
[2026-01-09 12:32:01] 2026-01-09 17:30:55,853 | INFO     | . get job = 0 s
[2026-01-09 12:32:01] 2026-01-09 17:30:55,853 | INFO     | . initial setup = 9 s
[2026-01-09 12:32:01] 2026-01-09 17:30:55,853 | INFO     | . payload setup = 75 s
[2026-01-09 12:32:01] 2026-01-09 17:30:55,853 | INFO     | . stage-in = 0 s
[2026-01-09 12:32:01] 2026-01-09 17:30:55,853 | INFO     | . payload execution = 19062 s
[2026-01-09 12:32:01] 2026-01-09 17:30:55,853 | INFO     | . stage-out = 3 s
[2026-01-09 12:32:01] 2026-01-09 17:30:55,853 | INFO     | . log creation = 0 s
[2026-01-09 12:32:01] 2026-01-09 17:30:55,853 | INFO     | ..............................
[2026-01-09 12:32:01] 2026-01-09 17:30:56,220 | INFO     | 
[2026-01-09 12:32:01] 2026-01-09 17:30:56,221 | INFO     | job summary report
[2026-01-09 12:32:01] 2026-01-09 17:30:56,221 | INFO     | --------------------------------------------------
[2026-01-09 12:32:01] 2026-01-09 17:30:56,221 | INFO     | PanDA job id: 6963161668
[2026-01-09 12:32:01] 2026-01-09 17:30:56,221 | INFO     | task id: 47898826
[2026-01-09 12:32:01] 2026-01-09 17:30:56,221 | INFO     | errors: (none)
[2026-01-09 12:32:01] 2026-01-09 17:30:56,221 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 12:32:01] 2026-01-09 17:30:56,221 | INFO     | pilot state: finished 
[2026-01-09 12:32:01] 2026-01-09 17:30:56,222 | INFO     | transexitcode: 0
[2026-01-09 12:32:01] 2026-01-09 17:30:56,222 | INFO     | exeerrorcode: 0
[2026-01-09 12:32:01] 2026-01-09 17:30:56,222 | INFO     | exeerrordiag: 
[2026-01-09 12:32:01] 2026-01-09 17:30:56,222 | INFO     | exitcode: 0
[2026-01-09 12:32:01] 2026-01-09 17:30:56,222 | INFO     | exitmsg: OK
[2026-01-09 12:32:01] 2026-01-09 17:30:56,222 | INFO     | cpuconsumptiontime: 46305 s
[2026-01-09 12:32:01] 2026-01-09 17:30:56,222 | INFO     | nevents: 400
[2026-01-09 12:32:01] 2026-01-09 17:30:56,222 | INFO     | neventsw: 0
[2026-01-09 12:32:01] 2026-01-09 17:30:56,222 | INFO     | pid: 2356597
[2026-01-09 12:32:01] 2026-01-09 17:30:56,222 | INFO     | pgrp: 2356597
[2026-01-09 12:32:01] 2026-01-09 17:30:56,222 | INFO     | corecount: 9
[2026-01-09 12:32:01] 2026-01-09 17:30:56,222 | INFO     | event service: False
[2026-01-09 12:32:01] 2026-01-09 17:30:56,222 | INFO     | sizes: {0: 2283142, 1: 2283827, 2: 2284026, 13: 2284026, 24: 2284082, 33: 2284372, 35: 2284556, 19141: 2317862, 19145: 2326860, 19149: 2326916, 19158: 2327110}
[2026-01-09 12:32:01] 2026-01-09 17:30:56,223 | INFO     | --------------------------------------------------
[2026-01-09 12:32:01] 2026-01-09 17:30:56,223 | INFO     | 
[2026-01-09 12:32:01] 2026-01-09 17:30:56,223 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-09 12:32:01] 2026-01-09 17:30:56,245 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 12:32:01] 2026-01-09 17:30:56,245 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 12:32:01] 2026-01-09 17:30:56,245 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 12:32:01] 2026-01-09 17:30:56,245 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 12:32:01] 2026-01-09 17:30:56,245 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 12:32:01] 2026-01-09 17:30:56,245 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 12:32:01] 2026-01-09 17:30:56,245 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 12:32:01] 2026-01-09 17:30:56,245 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 12:32:01] 2026-01-09 17:30:56,245 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 12:32:01] 2026-01-09 17:30:56,245 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 12:32:01] 2026-01-09 17:30:56,245 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 12:32:01] 2026-01-09 17:30:56,246 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 12:32:01] 2026-01-09 17:30:56,246 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 12:32:01] 2026-01-09 17:30:56,246 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 12:32:01] 2026-01-09 17:30:56,246 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 12:32:01] 2026-01-09 17:30:56,246 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 12:32:01] 2026-01-09 17:30:56,246 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 12:32:01] 2026-01-09 17:30:56,246 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 12:32:01] 2026-01-09 17:30:56,246 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 12:32:01] 2026-01-09 17:30:56,246 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 12:32:01] 2026-01-09 17:30:56,246 | INFO     | job 6963161668 has completed (purged errors)
[2026-01-09 12:32:01] 2026-01-09 17:30:56,246 | INFO     | overall cleanup function is called
[2026-01-09 12:32:01] 2026-01-09 17:30:57,255 | INFO     | --- collectZombieJob: --- 10, [2356597]
[2026-01-09 12:32:01] 2026-01-09 17:30:57,255 | INFO     | zombie collector waiting for pid 2356597
[2026-01-09 12:32:01] 2026-01-09 17:30:57,255 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 12:32:01] 2026-01-09 17:30:57,255 | INFO     | collected zombie processes
[2026-01-09 12:32:01] 2026-01-09 17:30:57,255 | INFO     | will attempt to kill all subprocesses of pid=2356597
[2026-01-09 12:32:01] 2026-01-09 17:30:57,917 | INFO     | process IDs to be killed: [2356597] (in reverse order)
[2026-01-09 12:32:01] 2026-01-09 17:30:58,024 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 12:32:01] 2026-01-09 17:30:58,025 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 12:32:01] 2026-01-09 17:30:58,074 | INFO     | did not find any defunct processes belonging to 2356597
[2026-01-09 12:32:01] 2026-01-09 17:30:58,107 | INFO     | did not find any defunct processes belonging to 2356597
[2026-01-09 12:32:01] 2026-01-09 17:30:58,107 | INFO     | ready for new job
[2026-01-09 12:32:01] 2026-01-09 17:30:58,107 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 12:32:01] 2026-01-09 17:30:58,112 | INFO     | ***************************************
[2026-01-09 12:32:01] 2026-01-09 17:30:58,112 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 12:32:01] 2026-01-09 17:30:58,112 | INFO     | ***************************************
[2026-01-09 12:32:01] 2026-01-09 17:30:58,112 | INFO     | 
[2026-01-09 12:32:01] 2026-01-09 17:30:58,128 | INFO     | architecture information:
[2026-01-09 12:32:01] 2026-01-09 17:30:58,158 | INFO     | executing command: cat /etc/os-release
[2026-01-09 12:32:01] 2026-01-09 17:30:58,222 | INFO     | cat /etc/os-release:
[2026-01-09 12:32:01] NAME="CentOS Linux"
[2026-01-09 12:32:01] VERSION="7 (Core)"
[2026-01-09 12:32:01] ID="centos"
[2026-01-09 12:32:01] ID_LIKE="rhel fedora"
[2026-01-09 12:32:01] VERSION_ID="7"
[2026-01-09 12:32:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 12:32:01] ANSI_COLOR="0;31"
[2026-01-09 12:32:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 12:32:01] HOME_URL="https://www.centos.org/"
[2026-01-09 12:32:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 12:32:01] 
[2026-01-09 12:32:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 12:32:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 12:32:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 12:32:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 12:32:01] 
[2026-01-09 12:32:01] 2026-01-09 17:30:58,222 | INFO     | ***************************************
[2026-01-09 12:32:01] 2026-01-09 17:30:58,734 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-09 12:32:01] 2026-01-09 17:30:58,818 | INFO     | sufficient remaining disk space (84702920704 B)
[2026-01-09 12:32:01] 2026-01-09 17:30:58,818 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 12:32:01] 2026-01-09 17:30:58,819 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 12:32:01] 2026-01-09 17:30:58,819 | INFO     | update_server=False
[2026-01-09 12:32:01] 2026-01-09 17:30:58,819 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 12:32:01] 2026-01-09 17:30:58,819 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:32:01] 2026-01-09 17:30:58,819 | INFO     | aborting loop
[2026-01-09 12:32:01] 2026-01-09 17:30:58,904 | INFO     | all job control threads have been joined
[2026-01-09 12:32:01] 2026-01-09 17:30:59,053 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 12:32:01] 2026-01-09 17:30:59,677 | INFO     | all data control threads have been joined
[2026-01-09 12:32:01] 2026-01-09 17:30:59,738 | INFO     | all payload control threads have been joined
[2026-01-09 12:32:01] 2026-01-09 17:30:59,824 | INFO     | [job] retrieve thread has finished
[2026-01-09 12:32:01] 2026-01-09 17:30:59,824 | INFO     | [job] job monitor thread has finished
[2026-01-09 12:32:01] 2026-01-09 17:30:59,827 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 12:32:01] 2026-01-09 17:30:59,910 | INFO     | [job] control thread has finished
[2026-01-09 12:32:01] 2026-01-09 17:30:59,911 | INFO     | [payload] failed_post thread has finished
[2026-01-09 12:32:01] 2026-01-09 17:31:00,684 | INFO     | [data] control thread has finished
[2026-01-09 12:32:01] 2026-01-09 17:31:00,744 | INFO     | [payload] control thread has finished
[2026-01-09 12:32:01] 2026-01-09 17:31:01,030 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:32:01] 2026-01-09 17:31:01,073 | INFO     | [data] copytool_in thread has finished
[2026-01-09 12:32:01] 2026-01-09 17:31:01,074 | INFO     | [data] copytool_out thread has finished
[2026-01-09 12:32:01] 2026-01-09 17:31:01,217 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 12:32:01] 2026-01-09 17:31:01,264 | INFO     | [job] validate thread has finished
[2026-01-09 12:32:01] 2026-01-09 17:31:01,272 | INFO     | [payload] validate_post thread has finished
[2026-01-09 12:32:01] 2026-01-09 17:31:01,282 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 12:32:01] 2026-01-09 17:31:02,031 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 12:32:01] 2026-01-09 17:31:02,036 | INFO     | [job] queue monitor thread has finished
[2026-01-09 12:32:01] 2026-01-09 17:31:06,040 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 12:32:01] 2026-01-09 17:31:09,105 | INFO     | job.realtimelogging is not enabled
[2026-01-09 12:32:01] 2026-01-09 17:31:10,111 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 12:32:01] 2026-01-09 17:31:28,840 | INFO     | PID=2341901 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 12:32:01] 2026-01-09 17:31:28,841 | INFO     | .. there are 11 such processes running
[2026-01-09 12:32:01] 2026-01-09 17:31:28,841 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 12:32:01] 2026-01-09 17:31:28,842 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 12:32:01] 2026-01-09 17:31:28,842 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 12:32:01] 2026-01-09 17:31:54,319 | INFO     | [monitor] cgroup control has ended
[2026-01-09 12:32:01] 2026-01-09 17:31:55,912 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140067888240448)>', '<ExcThread(monitor, started 140066869475072)>']
[2026-01-09 12:32:01] 2026-01-09 17:31:55,985 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 12:32:01] 2026-01-09 17:31:55,985 | INFO     | [monitor] control thread has ended
[2026-01-09 12:32:01] 2026-01-09 17:32:00,939 | INFO     | all workflow threads have been joined
[2026-01-09 12:32:01] 2026-01-09 17:32:00,939 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 12:32:01] 2026-01-09 17:32:00,939 | INFO     | traces error code: 0
[2026-01-09 12:32:01] 2026-01-09 17:32:00,939 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 12:32:01] 2026-01-09 17:32:01,296 [wrapper] ==== pilot stdout END ====
[2026-01-09 12:32:01] 2026-01-09 17:32:01,305 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 12:32:01] 2026-01-09 17:32:01,313 [wrapper] pilotpid: 2341901
[2026-01-09 12:32:01] 2026-01-09 17:32:01,323 [wrapper] Pilot exit status: 0
[2026-01-09 12:32:01] 2026-01-09 17:32:01,346 [wrapper] pandaids: 6963161668
[2026-01-09 12:32:01] 2026-01-09 17:32:01,594 [wrapper] cleanup supervisor_pilot 3061557 2341902
[2026-01-09 12:32:01] 2026-01-09 17:32:01,597 [wrapper] Test setup, not cleaning
[2026-01-09 12:32:01] 2026-01-09 17:32:01,644 [wrapper] apfmon messages muted
[2026-01-09 12:32:01] 2026-01-09 17:32:01,648 [wrapper] ==== wrapper stdout END ====
[2026-01-09 12:32:01] 2026-01-09 17:32:01,661 [wrapper] ==== wrapper stderr END ====
[2026-01-09 12:32:01]  *** Error codes and diagnostics ***
[2026-01-09 12:32:01]     "exeErrorCode": 0,
[2026-01-09 12:32:01]     "exeErrorDiag": "",
[2026-01-09 12:32:01]     "pilotErrorCode": 0,
[2026-01-09 12:32:01]     "pilotErrorDiag": "",
[2026-01-09 12:32:01]  *** Listing of results directory ***
[2026-01-09 12:32:01] total 442284
[2026-01-09 12:32:01] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 16:44 pilot3.tar.gz
[2026-01-09 12:32:01] -rwx------. 1 boincer umatlas     36322 Jan  8 16:46 runpilot2-wrapper.sh
[2026-01-09 12:32:01] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 16:47 queuedata.json
[2026-01-09 12:32:01] -rw-r--r--. 1 boincer umatlas       100 Jan  9 07:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 12:32:01] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 07:08 run_atlas
[2026-01-09 12:32:01] -rw-r--r--. 1 boincer umatlas       105 Jan  9 07:08 job.xml
[2026-01-09 12:32:01] -rw-r--r--. 2 boincer umatlas 223201135 Jan  9 07:08 EVNT.47898824._001289.pool.root.1
[2026-01-09 12:32:01] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 07:08 start_atlas.sh
[2026-01-09 12:32:01] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 07:08 shared
[2026-01-09 12:32:01] -rw-r--r--. 2 boincer umatlas    592397 Jan  9 07:08 input.tar.gz
[2026-01-09 12:32:01] -rw-r--r--. 1 boincer umatlas         0 Jan  9 07:08 boinc_lockfile
[2026-01-09 12:32:01] -rw-r--r--. 1 boincer umatlas      2519 Jan  9 07:08 pandaJob.out
[2026-01-09 12:32:01] -rw-------. 1 boincer umatlas        57 Jan  9 07:08 setup.sh.local
[2026-01-09 12:32:01] -rw-------. 1 boincer umatlas    989377 Jan  9 07:10 agis_schedconf.cvmfs.json
[2026-01-09 12:32:01] drwx------. 5 boincer umatlas      4096 Jan  9 07:10 pilot3
[2026-01-09 12:32:01] -rw-r--r--. 1 boincer umatlas      6902 Jan  9 12:28 init_data.xml
[2026-01-09 12:32:01] -rw-------. 1 boincer umatlas 219469756 Jan  9 12:28 HITS.47898826._033330.pool.root.1
[2026-01-09 12:32:01] -rw-r--r--. 1 boincer umatlas       530 Jan  9 12:29 boinc_task_state.xml
[2026-01-09 12:32:01] -rw-------. 1 boincer umatlas      1033 Jan  9 12:30 memory_monitor_summary.json
[2026-01-09 12:32:01] -rw-------. 1 boincer umatlas   1516240 Jan  9 12:30 agis_ddmendpoints.agis.ALL.json
[2026-01-09 12:32:01] -rw-------. 1 boincer umatlas    540847 Jan  9 12:30 log.47898826._033330.job.log.tgz.1
[2026-01-09 12:32:01] -rw-------. 1 boincer umatlas      7779 Jan  9 12:30 heartbeat.json
[2026-01-09 12:32:01] -rw-------. 1 boincer umatlas        95 Jan  9 12:31 pilot_heartbeat.json
[2026-01-09 12:32:01] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 12:31 boinc_mmap_file
[2026-01-09 12:32:01] -rw-r--r--. 1 boincer umatlas        28 Jan  9 12:31 wrapper_checkpoint.txt
[2026-01-09 12:32:01] -rw-------. 1 boincer umatlas      4896 Jan  9 12:32 pilotlog.txt
[2026-01-09 12:32:01] -rw-------. 1 boincer umatlas   2609655 Jan  9 12:32 log.47898826._033330.job.log.1
[2026-01-09 12:32:01] -rw-------. 1 boincer umatlas       357 Jan  9 12:32 output.list
[2026-01-09 12:32:01] -rw-r--r--. 1 boincer umatlas       620 Jan  9 12:32 runtime_log
[2026-01-09 12:32:01] -rw-------. 1 boincer umatlas   3174400 Jan  9 12:32 result.tar.gz
[2026-01-09 12:32:01] -rw-r--r--. 1 boincer umatlas      9343 Jan  9 12:32 runtime_log.err
[2026-01-09 12:32:01] -rw-------. 1 boincer umatlas       655 Jan  9 12:32 i4wLDmG1Cy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmhVlKDmAFGlbn.diag
[2026-01-09 12:32:01] -rw-r--r--. 1 boincer umatlas     21188 Jan  9 12:32 stderr.txt
[2026-01-09 12:32:01] HITS file was successfully produced:
[2026-01-09 12:32:01] -rw-------. 1 boincer umatlas 219469756 Jan  9 12:28 shared/HITS.pool.root.1
[2026-01-09 12:32:01]  *** Contents of shared directory: ***
[2026-01-09 12:32:01] total 436004
[2026-01-09 12:32:01] -rw-r--r--. 2 boincer umatlas 223201135 Jan  9 07:08 ATLAS.root_0
[2026-01-09 12:32:01] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 07:08 start_atlas.sh
[2026-01-09 12:32:01] -rw-r--r--. 2 boincer umatlas    592397 Jan  9 07:08 input.tar.gz
[2026-01-09 12:32:01] -rw-------. 1 boincer umatlas 219469756 Jan  9 12:28 HITS.pool.root.1
[2026-01-09 12:32:01] -rw-------. 1 boincer umatlas   3174400 Jan  9 12:32 result.tar.gz
12:32:03 (2337397): run_atlas exited; CPU time 46722.558906
12:32:03 (2337397): called boinc_finish(0)

</stderr_txt>
]]>

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