Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:54:27 (3423988): wrapper (7.7.26015): starting
07:54:27 (3423988): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 07:54:27] Arguments: --nthreads 8
[2026-01-09 07:54:27] Threads: 8
[2026-01-09 07:54:27] Checking for CVMFS
[2026-01-09 07:54:27] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 07:54:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 07:54:28] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 07:54:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 07:54:29] 2.13.3.0 11793 93437 383280 154944 0 185 17778723 32935936 26015 16776704 0 350886885 99.505 461706329 34941 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 07:54:29] CVMFS is ok
[2026-01-09 07:54:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 07:54:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 07:54:29] Further information can be found at the LHC@home message board.
[2026-01-09 07:54:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 07:54:29] Checking for apptainer binary...
[2026-01-09 07:54:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 07:54:29] Running /usr/bin/apptainer --version
[2026-01-09 07:54:29] apptainer version 1.4.5-2.el9
[2026-01-09 07:54:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 07:54:29] c6-2-11-2.aglt2.org
[2026-01-09 07:54:29] apptainer works
[2026-01-09 07:54:29] Set ATHENA_PROC_NUMBER=8
[2026-01-09 07:54:29] Set ATHENA_CORE_NUMBER=8
[2026-01-09 07:54:29] Starting ATLAS job with PandaID=6963187161
[2026-01-09 07:54:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 12:15:13]  *** The last 200 lines of the pilot log: ***
[2026-01-09 12:15:13] 2026-01-09 17:14:05,786 | INFO     | time since job start (15504s) is within the limit (349056.0s)
[2026-01-09 12:15:13] 2026-01-09 17:14:07,011 | INFO     | monitor loop #949: job 0:6963187161 is in state 'finished'
[2026-01-09 12:15:13] 2026-01-09 17:14:07,012 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 12:15:13] 2026-01-09 17:14:07,305 | INFO     | PID=3438096 has CPU usage=14.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-09 12:15:13] 2026-01-09 17:14:07,305 | INFO     | .. there are 24 such processes running
[2026-01-09 12:15:13] 2026-01-09 17:14:08,306 | INFO     | time since job start (15507s) is within the limit (349056.0s)
[2026-01-09 12:15:13] 2026-01-09 17:14:09,516 | INFO     | monitor loop #950: job 0:6963187161 is in state 'finished'
[2026-01-09 12:15:13] 2026-01-09 17:14:09,516 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 12:15:13] 2026-01-09 17:14:10,313 | INFO     | time since job start (15509s) is within the limit (349056.0s)
[2026-01-09 12:15:13] 2026-01-09 17:14:10,853 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 12:15:13] 2026-01-09 17:14:10,866 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2694.6812187500004
[2026-01-09 12:15:13] 2026-01-09 17:14:10,884 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6963187161/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 12:15:13] 2026-01-09 17:14:10,884 | INFO     | extracted standard info from prmon json
[2026-01-09 12:15:13] 2026-01-09 17:14:10,884 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 12:15:13] 2026-01-09 17:14:10,884 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 12:15:13] 2026-01-09 17:14:10,885 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 12:15:13] 2026-01-09 17:14:10,885 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 12:15:13] 2026-01-09 17:14:10,890 | INFO     | fitting pss+swap vs Time
[2026-01-09 12:15:13] 2026-01-09 17:14:10,890 | INFO     | sum of square deviations: 4962268669.650766
[2026-01-09 12:15:13] 2026-01-09 17:14:10,892 | INFO     | sum of deviations: 58426969448.079346
[2026-01-09 12:15:13] 2026-01-09 17:14:10,892 | INFO     | mean x: 1767971126.8412697
[2026-01-09 12:15:13] 2026-01-09 17:14:10,892 | INFO     | mean y: 2498846.126984127
[2026-01-09 12:15:13] 2026-01-09 17:14:10,892 | INFO     | intersect: -20814027200.680378
[2026-01-09 12:15:13] 2026-01-09 17:14:10,893 | INFO     | chi2: 2.1328054708816753
[2026-01-09 12:15:13] 2026-01-09 17:14:10,893 | INFO     | sum of square deviations: 4672699165.10933
[2026-01-09 12:15:13] 2026-01-09 17:14:10,895 | INFO     | sum of deviations: 57012435656.631516
[2026-01-09 12:15:13] 2026-01-09 17:14:10,895 | INFO     | mean x: 1767970974.3360324
[2026-01-09 12:15:13] 2026-01-09 17:14:10,895 | INFO     | mean y: 2498101.052631579
[2026-01-09 12:15:13] 2026-01-09 17:14:10,895 | INFO     | intersect: -21568830986.375744
[2026-01-09 12:15:13] 2026-01-09 17:14:10,895 | INFO     | chi2: 2.133913265119758
[2026-01-09 12:15:13] 2026-01-09 17:14:10,895 | INFO     | current chi2=2.133913265119758 (change=-0.051940706886158546 %)
[2026-01-09 12:15:13] 2026-01-09 17:14:10,895 | INFO     | right removable region: 246
[2026-01-09 12:15:13] 2026-01-09 17:14:10,896 | INFO     | sum of square deviations: 4672707951.749023
[2026-01-09 12:15:13] 2026-01-09 17:14:10,898 | INFO     | sum of deviations: 5627820754.846152
[2026-01-09 12:15:13] 2026-01-09 17:14:10,898 | INFO     | mean x: 1767971279.3441296
[2026-01-09 12:15:13] 2026-01-09 17:14:10,898 | INFO     | mean y: 2526486.3076923075
[2026-01-09 12:15:13] 2026-01-09 17:14:10,898 | INFO     | intersect: -2126822397.1680052
[2026-01-09 12:15:13] 2026-01-09 17:14:10,898 | INFO     | chi2: 0.11469637670294397
[2026-01-09 12:15:13] 2026-01-09 17:14:10,898 | INFO     | current chi2=0.11469637670294397 (change=94.62227670226625 %)
[2026-01-09 12:15:13] 2026-01-09 17:14:10,899 | INFO     | sum of square deviations: 4394636065.342957
[2026-01-09 12:15:13] 2026-01-09 17:14:10,900 | INFO     | sum of deviations: 1291882583.9545443
[2026-01-09 12:15:13] 2026-01-09 17:14:10,900 | INFO     | mean x: 1767971431.8471074
[2026-01-09 12:15:13] 2026-01-09 17:14:10,901 | INFO     | mean y: 2528835.8636363638
[2026-01-09 12:15:13] 2026-01-09 17:14:10,901 | INFO     | intersect: -517198274.1340861
[2026-01-09 12:15:13] 2026-01-09 17:14:10,901 | INFO     | chi2: 0.09239644554383507
[2026-01-09 12:15:13] 2026-01-09 17:14:10,901 | INFO     | current chi2=0.09239644554383507 (change=19.442576827744304 %)
[2026-01-09 12:15:13] 2026-01-09 17:14:10,901 | INFO     | left removable region: 20
[2026-01-09 12:15:13] 2026-01-09 17:14:10,902 | INFO     | sum of square deviations: 3579330241.610634
[2026-01-09 12:15:13] 2026-01-09 17:14:10,903 | INFO     | sum of deviations: 11653095745.557524
[2026-01-09 12:15:13] 2026-01-09 17:14:10,903 | INFO     | mean x: 1767971553.8318584
[2026-01-09 12:15:13] 2026-01-09 17:14:10,903 | INFO     | mean y: 2522172.1725663715
[2026-01-09 12:15:13] 2026-01-09 17:14:10,903 | INFO     | intersect: -5753398740.828764
[2026-01-09 12:15:13] 2026-01-09 17:14:10,904 | INFO     | chi2: 0.002303153693894591
[2026-01-09 12:15:13] 2026-01-09 17:14:10,904 | INFO     | current memory leak: 3.26 B/s (using 226 data points, chi2=0.00)
[2026-01-09 12:15:13] 2026-01-09 17:14:10,904 | INFO     | could have reported an average CPU frequency of 2680 MHz (12 samples)
[2026-01-09 12:15:13] 2026-01-09 17:14:10,905 | INFO     | ..............................
[2026-01-09 12:15:13] 2026-01-09 17:14:10,905 | INFO     | . Timing measurements:
[2026-01-09 12:15:13] 2026-01-09 17:14:10,905 | INFO     | . get job = 0 s
[2026-01-09 12:15:13] 2026-01-09 17:14:10,905 | INFO     | . initial setup = 7 s
[2026-01-09 12:15:13] 2026-01-09 17:14:10,905 | INFO     | . payload setup = 38 s
[2026-01-09 12:15:13] 2026-01-09 17:14:10,905 | INFO     | . stage-in = 0 s
[2026-01-09 12:15:13] 2026-01-09 17:14:10,905 | INFO     | . payload execution = 15393 s
[2026-01-09 12:15:13] 2026-01-09 17:14:10,905 | INFO     | . stage-out = 2 s
[2026-01-09 12:15:13] 2026-01-09 17:14:10,905 | INFO     | . log creation = 0 s
[2026-01-09 12:15:13] 2026-01-09 17:14:10,905 | INFO     | ..............................
[2026-01-09 12:15:13] 2026-01-09 17:14:11,176 | INFO     | 
[2026-01-09 12:15:13] 2026-01-09 17:14:11,176 | INFO     | job summary report
[2026-01-09 12:15:13] 2026-01-09 17:14:11,176 | INFO     | --------------------------------------------------
[2026-01-09 12:15:13] 2026-01-09 17:14:11,177 | INFO     | PanDA job id: 6963187161
[2026-01-09 12:15:13] 2026-01-09 17:14:11,177 | INFO     | task id: 47898826
[2026-01-09 12:15:13] 2026-01-09 17:14:11,177 | INFO     | errors: (none)
[2026-01-09 12:15:13] 2026-01-09 17:14:11,177 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 12:15:13] 2026-01-09 17:14:11,177 | INFO     | pilot state: finished 
[2026-01-09 12:15:13] 2026-01-09 17:14:11,177 | INFO     | transexitcode: 0
[2026-01-09 12:15:13] 2026-01-09 17:14:11,177 | INFO     | exeerrorcode: 0
[2026-01-09 12:15:13] 2026-01-09 17:14:11,177 | INFO     | exeerrordiag: 
[2026-01-09 12:15:13] 2026-01-09 17:14:11,177 | INFO     | exitcode: 0
[2026-01-09 12:15:13] 2026-01-09 17:14:11,177 | INFO     | exitmsg: OK
[2026-01-09 12:15:13] 2026-01-09 17:14:11,177 | INFO     | cpuconsumptiontime: 56682 s
[2026-01-09 12:15:13] 2026-01-09 17:14:11,177 | INFO     | nevents: 400
[2026-01-09 12:15:13] 2026-01-09 17:14:11,177 | INFO     | neventsw: 0
[2026-01-09 12:15:13] 2026-01-09 17:14:11,177 | INFO     | pid: 3446318
[2026-01-09 12:15:13] 2026-01-09 17:14:11,177 | INFO     | pgrp: 3446318
[2026-01-09 12:15:13] 2026-01-09 17:14:11,178 | INFO     | corecount: 8
[2026-01-09 12:15:13] 2026-01-09 17:14:11,178 | INFO     | event service: False
[2026-01-09 12:15:13] 2026-01-09 17:14:11,178 | INFO     | sizes: {0: 2283744, 1: 2283828, 2: 2284027, 13: 2284027, 24: 2284083, 31: 2284373, 35: 2284529, 15436: 2315589, 15440: 2324643, 15448: 2324781}
[2026-01-09 12:15:13] 2026-01-09 17:14:11,178 | INFO     | --------------------------------------------------
[2026-01-09 12:15:13] 2026-01-09 17:14:11,178 | INFO     | 
[2026-01-09 12:15:13] 2026-01-09 17:14:11,178 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-01-09 12:15:13] 2026-01-09 17:14:11,201 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 12:15:13] 2026-01-09 17:14:11,202 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 12:15:13] 2026-01-09 17:14:11,202 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 12:15:13] 2026-01-09 17:14:11,202 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 12:15:13] 2026-01-09 17:14:11,202 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 12:15:13] 2026-01-09 17:14:11,202 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 12:15:13] 2026-01-09 17:14:11,202 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 12:15:13] 2026-01-09 17:14:11,202 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 12:15:13] 2026-01-09 17:14:11,202 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 12:15:13] 2026-01-09 17:14:11,202 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 12:15:13] 2026-01-09 17:14:11,202 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 12:15:13] 2026-01-09 17:14:11,203 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 12:15:13] 2026-01-09 17:14:11,203 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 12:15:13] 2026-01-09 17:14:11,203 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 12:15:13] 2026-01-09 17:14:11,203 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 12:15:13] 2026-01-09 17:14:11,203 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 12:15:13] 2026-01-09 17:14:11,203 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 12:15:13] 2026-01-09 17:14:11,203 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 12:15:13] 2026-01-09 17:14:11,203 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 12:15:13] 2026-01-09 17:14:11,203 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 12:15:13] 2026-01-09 17:14:11,203 | INFO     | job 6963187161 has completed (purged errors)
[2026-01-09 12:15:13] 2026-01-09 17:14:11,203 | INFO     | overall cleanup function is called
[2026-01-09 12:15:13] 2026-01-09 17:14:12,212 | INFO     | --- collectZombieJob: --- 10, [3446318]
[2026-01-09 12:15:13] 2026-01-09 17:14:12,212 | INFO     | zombie collector waiting for pid 3446318
[2026-01-09 12:15:13] 2026-01-09 17:14:12,212 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 12:15:13] 2026-01-09 17:14:12,213 | INFO     | collected zombie processes
[2026-01-09 12:15:13] 2026-01-09 17:14:12,213 | INFO     | will attempt to kill all subprocesses of pid=3446318
[2026-01-09 12:15:13] 2026-01-09 17:14:12,671 | INFO     | process IDs to be killed: [3446318] (in reverse order)
[2026-01-09 12:15:13] 2026-01-09 17:14:12,790 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 12:15:13] 2026-01-09 17:14:12,790 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 12:15:13] 2026-01-09 17:14:12,807 | INFO     | did not find any defunct processes belonging to 3446318
[2026-01-09 12:15:13] 2026-01-09 17:14:12,823 | INFO     | did not find any defunct processes belonging to 3446318
[2026-01-09 12:15:13] 2026-01-09 17:14:12,823 | INFO     | ready for new job
[2026-01-09 12:15:13] 2026-01-09 17:14:12,824 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 12:15:13] 2026-01-09 17:14:12,826 | INFO     | ***************************************
[2026-01-09 12:15:13] 2026-01-09 17:14:12,826 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 12:15:13] 2026-01-09 17:14:12,826 | INFO     | ***************************************
[2026-01-09 12:15:13] 2026-01-09 17:14:12,826 | INFO     | 
[2026-01-09 12:15:13] 2026-01-09 17:14:12,831 | INFO     | architecture information:
[2026-01-09 12:15:13] 2026-01-09 17:14:12,831 | INFO     | executing command: cat /etc/os-release
[2026-01-09 12:15:13] 2026-01-09 17:14:12,859 | INFO     | cat /etc/os-release:
[2026-01-09 12:15:13] NAME="CentOS Linux"
[2026-01-09 12:15:13] VERSION="7 (Core)"
[2026-01-09 12:15:13] ID="centos"
[2026-01-09 12:15:13] ID_LIKE="rhel fedora"
[2026-01-09 12:15:13] VERSION_ID="7"
[2026-01-09 12:15:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 12:15:13] ANSI_COLOR="0;31"
[2026-01-09 12:15:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 12:15:13] HOME_URL="https://www.centos.org/"
[2026-01-09 12:15:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 12:15:13] 
[2026-01-09 12:15:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 12:15:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 12:15:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 12:15:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 12:15:13] 
[2026-01-09 12:15:13] 2026-01-09 17:14:12,860 | INFO     | ***************************************
[2026-01-09 12:15:13] 2026-01-09 17:14:13,362 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-01-09 12:15:13] 2026-01-09 17:14:13,384 | INFO     | sufficient remaining disk space (94076141568 B)
[2026-01-09 12:15:13] 2026-01-09 17:14:13,384 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 12:15:13] 2026-01-09 17:14:13,384 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 12:15:13] 2026-01-09 17:14:13,384 | INFO     | update_server=False
[2026-01-09 12:15:13] 2026-01-09 17:14:13,384 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 12:15:13] 2026-01-09 17:14:13,385 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 12:15:13] 2026-01-09 17:14:13,389 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:15:13] 2026-01-09 17:14:13,389 | INFO     | aborting loop
[2026-01-09 12:15:13] 2026-01-09 17:14:13,395 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 12:15:13] 2026-01-09 17:14:13,976 | INFO     | all data control threads have been joined
[2026-01-09 12:15:13] 2026-01-09 17:14:14,162 | INFO     | all job control threads have been joined
[2026-01-09 12:15:13] 2026-01-09 17:14:14,393 | INFO     | [job] retrieve thread has finished
[2026-01-09 12:15:13] 2026-01-09 17:14:14,395 | INFO     | [job] job monitor thread has finished
[2026-01-09 12:15:13] 2026-01-09 17:14:14,466 | INFO     | [payload] validate_post thread has finished
[2026-01-09 12:15:13] 2026-01-09 17:14:14,517 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 12:15:13] 2026-01-09 17:14:14,533 | INFO     | all payload control threads have been joined
[2026-01-09 12:15:13] 2026-01-09 17:14:14,733 | INFO     | [job] validate thread has finished
[2026-01-09 12:15:13] 2026-01-09 17:14:14,956 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 12:15:13] 2026-01-09 17:14:14,981 | INFO     | [data] control thread has finished
[2026-01-09 12:15:13] 2026-01-09 17:14:15,168 | INFO     | [job] control thread has finished
[2026-01-09 12:15:13] 2026-01-09 17:14:15,233 | INFO     | [payload] failed_post thread has finished
[2026-01-09 12:15:13] 2026-01-09 17:14:15,392 | INFO     | [data] copytool_out thread has finished
[2026-01-09 12:15:13] 2026-01-09 17:14:15,538 | INFO     | [payload] control thread has finished
[2026-01-09 12:15:13] 2026-01-09 17:14:15,582 | INFO     | [data] copytool_in thread has finished
[2026-01-09 12:15:13] 2026-01-09 17:14:15,618 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 12:15:13] 2026-01-09 17:14:15,880 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 12:15:13] 2026-01-09 17:14:16,030 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:15:13] 2026-01-09 17:14:17,036 | INFO     | [job] queue monitor thread has finished
[2026-01-09 12:15:13] 2026-01-09 17:14:17,403 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 12:15:13] 2026-01-09 17:14:43,965 | INFO     | PID=3438096 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 12:15:13] 2026-01-09 17:14:43,966 | INFO     | .. there are 24 such processes running
[2026-01-09 12:15:13] 2026-01-09 17:14:43,966 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 12:15:13] 2026-01-09 17:14:43,966 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 12:15:13] 2026-01-09 17:14:43,966 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 12:15:13] 2026-01-09 17:15:07,817 | INFO     | [monitor] cgroup control has ended
[2026-01-09 12:15:13] 2026-01-09 17:15:07,933 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140493920618304)>', '<ExcThread(monitor, started 140493044299520)>']
[2026-01-09 12:15:13] 2026-01-09 17:15:08,116 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 12:15:13] 2026-01-09 17:15:08,116 | INFO     | [monitor] control thread has ended
[2026-01-09 12:15:13] 2026-01-09 17:15:12,959 | INFO     | all workflow threads have been joined
[2026-01-09 12:15:13] 2026-01-09 17:15:12,959 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 12:15:13] 2026-01-09 17:15:12,960 | INFO     | traces error code: 0
[2026-01-09 12:15:13] 2026-01-09 17:15:12,960 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 12:15:13] 2026-01-09 17:15:13,119 [wrapper] ==== pilot stdout END ====
[2026-01-09 12:15:13] 2026-01-09 17:15:13,122 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 12:15:13] 2026-01-09 17:15:13,125 [wrapper] pilotpid: 3438096
[2026-01-09 12:15:13] 2026-01-09 17:15:13,127 [wrapper] Pilot exit status: 0
[2026-01-09 12:15:13] 2026-01-09 17:15:13,143 [wrapper] pandaids: 6963187161
[2026-01-09 12:15:13] 2026-01-09 17:15:13,342 [wrapper] cleanup supervisor_pilot  347341 3438097
[2026-01-09 12:15:13] 2026-01-09 17:15:13,380 [wrapper] Test setup, not cleaning
[2026-01-09 12:15:13] 2026-01-09 17:15:13,383 [wrapper] apfmon messages muted
[2026-01-09 12:15:13] 2026-01-09 17:15:13,386 [wrapper] ==== wrapper stdout END ====
[2026-01-09 12:15:13] 2026-01-09 17:15:13,388 [wrapper] ==== wrapper stderr END ====
[2026-01-09 12:15:13]  *** Error codes and diagnostics ***
[2026-01-09 12:15:13]     "exeErrorCode": 0,
[2026-01-09 12:15:13]     "exeErrorDiag": "",
[2026-01-09 12:15:13]     "pilotErrorCode": 0,
[2026-01-09 12:15:13]     "pilotErrorDiag": "",
[2026-01-09 12:15:13]  *** Listing of results directory ***
[2026-01-09 12:15:13] total 435672
[2026-01-09 12:15:13] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-09 12:15:13] -rwx------. 1 boincer umatlas     36322 Jan  8 23:25 runpilot2-wrapper.sh
[2026-01-09 12:15:13] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 23:28 queuedata.json
[2026-01-09 12:15:13] -rw-r--r--. 1 boincer umatlas       100 Jan  9 07:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 12:15:13] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 07:54 run_atlas
[2026-01-09 12:15:13] -rw-r--r--. 1 boincer umatlas       105 Jan  9 07:54 job.xml
[2026-01-09 12:15:13] -rw-r--r--. 2 boincer umatlas 222232026 Jan  9 07:54 EVNT.47898824._001420.pool.root.1
[2026-01-09 12:15:13] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 07:54 shared
[2026-01-09 12:15:13] -rw-r--r--. 2 boincer umatlas    592396 Jan  9 07:54 input.tar.gz
[2026-01-09 12:15:13] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 07:54 start_atlas.sh
[2026-01-09 12:15:13] -rw-r--r--. 1 boincer umatlas         0 Jan  9 07:54 boinc_lockfile
[2026-01-09 12:15:13] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 07:54 pandaJob.out
[2026-01-09 12:15:13] -rw-------. 1 boincer umatlas        57 Jan  9 07:54 setup.sh.local
[2026-01-09 12:15:13] -rw-------. 1 boincer umatlas    989377 Jan  9 07:55 agis_schedconf.cvmfs.json
[2026-01-09 12:15:13] drwx------. 5 boincer umatlas      4096 Jan  9 07:55 pilot3
[2026-01-09 12:15:13] -rw-r--r--. 1 boincer umatlas      6877 Jan  9 12:11 init_data.xml
[2026-01-09 12:15:13] -rw-------. 1 boincer umatlas 215143937 Jan  9 12:13 HITS.47898826._037035.pool.root.1
[2026-01-09 12:15:13] -rw-r--r--. 1 boincer umatlas       531 Jan  9 12:13 boinc_task_state.xml
[2026-01-09 12:15:13] -rw-------. 1 boincer umatlas      1044 Jan  9 12:13 memory_monitor_summary.json
[2026-01-09 12:15:13] -rw-------. 1 boincer umatlas   1516240 Jan  9 12:14 agis_ddmendpoints.agis.ALL.json
[2026-01-09 12:15:13] -rw-------. 1 boincer umatlas    468264 Jan  9 12:14 log.47898826._037035.job.log.tgz.1
[2026-01-09 12:15:13] -rw-------. 1 boincer umatlas        95 Jan  9 12:14 pilot_heartbeat.json
[2026-01-09 12:15:13] -rw-------. 1 boincer umatlas      7840 Jan  9 12:14 heartbeat.json
[2026-01-09 12:15:13] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 12:14 boinc_mmap_file
[2026-01-09 12:15:13] -rw-r--r--. 1 boincer umatlas        28 Jan  9 12:14 wrapper_checkpoint.txt
[2026-01-09 12:15:13] -rw-------. 1 boincer umatlas      4824 Jan  9 12:15 pilotlog.txt
[2026-01-09 12:15:13] -rw-------. 1 boincer umatlas   1948863 Jan  9 12:15 log.47898826._037035.job.log.1
[2026-01-09 12:15:13] -rw-------. 1 boincer umatlas       357 Jan  9 12:15 output.list
[2026-01-09 12:15:13] -rw-r--r--. 1 boincer umatlas       620 Jan  9 12:15 runtime_log
[2026-01-09 12:15:13] -rw-------. 1 boincer umatlas   2437120 Jan  9 12:15 result.tar.gz
[2026-01-09 12:15:13] -rw-r--r--. 1 boincer umatlas      9348 Jan  9 12:15 runtime_log.err
[2026-01-09 12:15:13] -rw-------. 1 boincer umatlas       657 Jan  9 12:15 RFGKDmjEJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmk4gKDm1npBBo.diag
[2026-01-09 12:15:13] -rw-r--r--. 1 boincer umatlas     21513 Jan  9 12:15 stderr.txt
[2026-01-09 12:15:13] HITS file was successfully produced:
[2026-01-09 12:15:13] -rw-------. 1 boincer umatlas 215143937 Jan  9 12:13 shared/HITS.pool.root.1
[2026-01-09 12:15:13]  *** Contents of shared directory: ***
[2026-01-09 12:15:13] total 430112
[2026-01-09 12:15:13] -rw-r--r--. 2 boincer umatlas 222232026 Jan  9 07:54 ATLAS.root_0
[2026-01-09 12:15:13] -rw-r--r--. 2 boincer umatlas    592396 Jan  9 07:54 input.tar.gz
[2026-01-09 12:15:13] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 07:54 start_atlas.sh
[2026-01-09 12:15:13] -rw-------. 1 boincer umatlas 215143937 Jan  9 12:13 HITS.pool.root.1
[2026-01-09 12:15:13] -rw-------. 1 boincer umatlas   2437120 Jan  9 12:15 result.tar.gz
12:15:14 (3423988): run_atlas exited; CPU time 57340.353382
12:15:14 (3423988): called boinc_finish(0)

</stderr_txt>
]]>

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