Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:10:39 (18501): wrapper (7.7.26015): starting
15:10:39 (18501): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 15:10:39] Arguments: --nthreads 8
[2026-01-09 15:10:39] Threads: 8
[2026-01-09 15:10:39] Checking for CVMFS
[2026-01-09 15:10:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 15:10:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 15:10:39] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 15:10:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 15:10:39] 2.11.2.0 15174 35500 97664 154945 2 57 13096104 25165825 0 130560 0 16395703 99.884 7424867 3711 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 15:10:39] CVMFS is ok
[2026-01-09 15:10:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 15:10:39] Checking for apptainer binary...
[2026-01-09 15:10:39] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 15:10:39] Running /usr/bin/apptainer --version
[2026-01-09 15:10:39] apptainer version 1.3.2-1.el7
[2026-01-09 15:10:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 15:10:41] cg-vwn376.simple-grid.lan
[2026-01-09 15:10:41] apptainer works
[2026-01-09 15:10:41] Set ATHENA_PROC_NUMBER=8
[2026-01-09 15:10:41] Set ATHENA_CORE_NUMBER=8
[2026-01-09 15:10:41] Starting ATLAS job with PandaID=6963757462
[2026-01-09 15:10:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/18 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 18:14:23]  *** The last 200 lines of the pilot log: ***
[2026-01-09 18:14:23] 2026-01-09 17:13:35,325 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 18:14:23] 2026-01-09 17:13:35,326 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 18:14:23] 2026-01-09 17:13:35,328 | INFO     | using path: /var/lib/boinc/slots/18/PanDA_Pilot-6963757462/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 18:14:23] 2026-01-09 17:13:35,329 | INFO     | extracted standard info from prmon json
[2026-01-09 18:14:23] 2026-01-09 17:13:35,329 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 18:14:23] 2026-01-09 17:13:35,329 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 18:14:23] 2026-01-09 17:13:35,330 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 18:14:23] 2026-01-09 17:13:35,330 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 18:14:23] 2026-01-09 17:13:35,334 | INFO     | fitting pss+swap vs Time
[2026-01-09 18:14:23] 2026-01-09 17:13:35,335 | INFO     | sum of square deviations: 1778377530.0
[2026-01-09 18:14:23] 2026-01-09 17:13:35,336 | INFO     | sum of deviations: 29866639745.0
[2026-01-09 18:14:23] 2026-01-09 17:13:35,336 | INFO     | mean x: 1767973323.0
[2026-01-09 18:14:23] 2026-01-09 17:13:35,336 | INFO     | mean y: 2489594.4245810057
[2026-01-09 18:14:23] 2026-01-09 17:13:35,337 | INFO     | intersect: -29689418578.083385
[2026-01-09 18:14:23] 2026-01-09 17:13:35,337 | INFO     | chi2: 1.6464432693154882
[2026-01-09 18:14:23] 2026-01-09 17:13:35,337 | INFO     | sum of square deviations: 1633472487.5
[2026-01-09 18:14:23] 2026-01-09 17:13:35,339 | INFO     | sum of deviations: 29103304045.0
[2026-01-09 18:14:23] 2026-01-09 17:13:35,339 | INFO     | mean x: 1767973170.5
[2026-01-09 18:14:23] 2026-01-09 17:13:35,339 | INFO     | mean y: 2488790.8735632184
[2026-01-09 18:14:23] 2026-01-09 17:13:35,339 | INFO     | intersect: -31497191257.74074
[2026-01-09 18:14:23] 2026-01-09 17:13:35,339 | INFO     | chi2: 1.6473250308858665
[2026-01-09 18:14:23] 2026-01-09 17:13:35,340 | INFO     | current chi2=1.6473250308858665 (change=-0.05355553919235976 %)
[2026-01-09 18:14:23] 2026-01-09 17:13:35,340 | INFO     | right removable region: 173
[2026-01-09 18:14:23] 2026-01-09 17:13:35,340 | INFO     | sum of square deviations: 1633472487.5
[2026-01-09 18:14:23] 2026-01-09 17:13:35,341 | INFO     | sum of deviations: -1346085017.499999
[2026-01-09 18:14:23] 2026-01-09 17:13:35,342 | INFO     | mean x: 1767973475.5
[2026-01-09 18:14:23] 2026-01-09 17:13:35,342 | INFO     | mean y: 2522120.8103448274
[2026-01-09 18:14:23] 2026-01-09 17:13:35,342 | INFO     | intersect: 1459444490.1306005
[2026-01-09 18:14:23] 2026-01-09 17:13:35,342 | INFO     | chi2: 0.0730652219863611
[2026-01-09 18:14:23] 2026-01-09 17:13:35,342 | INFO     | current chi2=0.0730652219863611 (change=95.56223871492773 %)
[2026-01-09 18:14:23] 2026-01-09 17:13:35,343 | INFO     | sum of square deviations: 1496660620.0
[2026-01-09 18:14:23] 2026-01-09 17:13:35,344 | INFO     | sum of deviations: -7433020068.0
[2026-01-09 18:14:23] 2026-01-09 17:13:35,344 | INFO     | mean x: 1767973628.0
[2026-01-09 18:14:23] 2026-01-09 17:13:35,344 | INFO     | mean y: 2528853.023668639
[2026-01-09 18:14:23] 2026-01-09 17:13:35,344 | INFO     | intersect: 8782998707.718428
[2026-01-09 18:14:23] 2026-01-09 17:13:35,345 | INFO     | chi2: 0.01306704736512319
[2026-01-09 18:14:23] 2026-01-09 17:13:35,345 | INFO     | current chi2=0.01306704736512319 (change=82.11591368659307 %)
[2026-01-09 18:14:23] 2026-01-09 17:13:35,345 | INFO     | sum of square deviations: 1367709365.0
[2026-01-09 18:14:23] 2026-01-09 17:13:35,346 | INFO     | sum of deviations: -7560468130.5
[2026-01-09 18:14:23] 2026-01-09 17:13:35,346 | INFO     | mean x: 1767973780.5
[2026-01-09 18:14:23] 2026-01-09 17:13:35,347 | INFO     | mean y: 2528996.4207317075
[2026-01-09 18:14:23] 2026-01-09 17:13:35,347 | INFO     | intersect: 9775591728.23134
[2026-01-09 18:14:23] 2026-01-09 17:13:35,347 | INFO     | chi2: 0.012125758219324366
[2026-01-09 18:14:23] 2026-01-09 17:13:35,347 | INFO     | current chi2=0.012125758219324366 (change=7.203533587175835 %)
[2026-01-09 18:14:23] 2026-01-09 17:13:35,347 | INFO     | left removable region: 30
[2026-01-09 18:14:23] 2026-01-09 17:13:35,348 | INFO     | sum of square deviations: 906703512.0
[2026-01-09 18:14:23] 2026-01-09 17:13:35,349 | INFO     | sum of deviations: -4763191405.000005
[2026-01-09 18:14:23] 2026-01-09 17:13:35,349 | INFO     | mean x: 1767974055.0
[2026-01-09 18:14:23] 2026-01-09 17:13:35,349 | INFO     | mean y: 2525830.5314685316
[2026-01-09 18:14:23] 2026-01-09 17:13:35,349 | INFO     | intersect: 9290235331.582796
[2026-01-09 18:14:23] 2026-01-09 17:13:35,349 | INFO     | chi2: 0.01145838625854849
[2026-01-09 18:14:23] 2026-01-09 17:13:35,350 | INFO     | current memory leak: -5.25 B/s (using 143 data points, chi2=0.01)
[2026-01-09 18:14:23] 2026-01-09 17:13:35,350 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-01-09 18:14:23] 2026-01-09 17:13:35,350 | INFO     | ..............................
[2026-01-09 18:14:23] 2026-01-09 17:13:35,350 | INFO     | . Timing measurements:
[2026-01-09 18:14:23] 2026-01-09 17:13:35,351 | INFO     | . get job = 0 s
[2026-01-09 18:14:23] 2026-01-09 17:13:35,351 | INFO     | . initial setup = 2 s
[2026-01-09 18:14:23] 2026-01-09 17:13:35,351 | INFO     | . payload setup = 8 s
[2026-01-09 18:14:23] 2026-01-09 17:13:35,351 | INFO     | . stage-in = 0 s
[2026-01-09 18:14:23] 2026-01-09 17:13:35,351 | INFO     | . payload execution = 10915 s
[2026-01-09 18:14:23] 2026-01-09 17:13:35,351 | INFO     | . stage-out = 1 s
[2026-01-09 18:14:23] 2026-01-09 17:13:35,351 | INFO     | . log creation = 0 s
[2026-01-09 18:14:23] 2026-01-09 17:13:35,351 | INFO     | ..............................
[2026-01-09 18:14:23] 2026-01-09 17:13:35,470 | INFO     | 
[2026-01-09 18:14:23] 2026-01-09 17:13:35,470 | INFO     | job summary report
[2026-01-09 18:14:23] 2026-01-09 17:13:35,470 | INFO     | --------------------------------------------------
[2026-01-09 18:14:23] 2026-01-09 17:13:35,470 | INFO     | PanDA job id: 6963757462
[2026-01-09 18:14:23] 2026-01-09 17:13:35,470 | INFO     | task id: 47898826
[2026-01-09 18:14:23] 2026-01-09 17:13:35,471 | INFO     | errors: (none)
[2026-01-09 18:14:23] 2026-01-09 17:13:35,471 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 18:14:23] 2026-01-09 17:13:35,471 | INFO     | pilot state: finished 
[2026-01-09 18:14:23] 2026-01-09 17:13:35,471 | INFO     | transexitcode: 0
[2026-01-09 18:14:23] 2026-01-09 17:13:35,471 | INFO     | exeerrorcode: 0
[2026-01-09 18:14:23] 2026-01-09 17:13:35,471 | INFO     | exeerrordiag: 
[2026-01-09 18:14:23] 2026-01-09 17:13:35,471 | INFO     | exitcode: 0
[2026-01-09 18:14:23] 2026-01-09 17:13:35,471 | INFO     | exitmsg: OK
[2026-01-09 18:14:23] 2026-01-09 17:13:35,471 | INFO     | cpuconsumptiontime: 81143 s
[2026-01-09 18:14:23] 2026-01-09 17:13:35,472 | INFO     | nevents: 400
[2026-01-09 18:14:23] 2026-01-09 17:13:35,472 | INFO     | neventsw: 0
[2026-01-09 18:14:23] 2026-01-09 17:13:35,472 | INFO     | pid: 28663
[2026-01-09 18:14:23] 2026-01-09 17:13:35,472 | INFO     | pgrp: 28663
[2026-01-09 18:14:23] 2026-01-09 17:13:35,472 | INFO     | corecount: 8
[2026-01-09 18:14:23] 2026-01-09 17:13:35,472 | INFO     | event service: False
[2026-01-09 18:14:23] 2026-01-09 17:13:35,472 | INFO     | sizes: {0: 2283920, 1: 2283920, 6: 2284210, 12: 2284238, 10927: 2312866, 10928: 2312865, 10930: 2322049, 10931: 2322133, 10939: 2322391}
[2026-01-09 18:14:23] 2026-01-09 17:13:35,472 | INFO     | --------------------------------------------------
[2026-01-09 18:14:23] 2026-01-09 17:13:35,472 | INFO     | 
[2026-01-09 18:14:23] 2026-01-09 17:13:35,473 | INFO     | executing command: ls -lF /var/lib/boinc/slots/18
[2026-01-09 18:14:23] 2026-01-09 17:13:35,508 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 18:14:23] 2026-01-09 17:13:35,508 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 18:14:23] 2026-01-09 17:13:35,508 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 18:14:23] 2026-01-09 17:13:35,509 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 18:14:23] 2026-01-09 17:13:35,509 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 18:14:23] 2026-01-09 17:13:35,509 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 18:14:23] 2026-01-09 17:13:35,509 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 18:14:23] 2026-01-09 17:13:35,509 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 18:14:23] 2026-01-09 17:13:35,509 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 18:14:23] 2026-01-09 17:13:35,509 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 18:14:23] 2026-01-09 17:13:35,509 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 18:14:23] 2026-01-09 17:13:35,510 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 18:14:23] 2026-01-09 17:13:35,510 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 18:14:23] 2026-01-09 17:13:35,510 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 18:14:23] 2026-01-09 17:13:35,510 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 18:14:23] 2026-01-09 17:13:35,510 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 18:14:23] 2026-01-09 17:13:35,510 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 18:14:23] 2026-01-09 17:13:35,510 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 18:14:23] 2026-01-09 17:13:35,510 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 18:14:23] 2026-01-09 17:13:35,511 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 18:14:23] 2026-01-09 17:13:35,511 | INFO     | job 6963757462 has completed (purged errors)
[2026-01-09 18:14:23] 2026-01-09 17:13:35,511 | INFO     | overall cleanup function is called
[2026-01-09 18:14:23] 2026-01-09 17:13:36,519 | INFO     | --- collectZombieJob: --- 10, [28663]
[2026-01-09 18:14:23] 2026-01-09 17:13:36,519 | INFO     | zombie collector waiting for pid 28663
[2026-01-09 18:14:23] 2026-01-09 17:13:36,520 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 18:14:23] 2026-01-09 17:13:36,520 | INFO     | collected zombie processes
[2026-01-09 18:14:23] 2026-01-09 17:13:36,520 | INFO     | will attempt to kill all subprocesses of pid=28663
[2026-01-09 18:14:23] 2026-01-09 17:13:36,585 | INFO     | process IDs to be killed: [28663] (in reverse order)
[2026-01-09 18:14:23] 2026-01-09 17:13:36,662 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 18:14:23] 2026-01-09 17:13:36,663 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 18:14:23] 2026-01-09 17:13:36,665 | INFO     | did not find any defunct processes belonging to 28663
[2026-01-09 18:14:23] 2026-01-09 17:13:36,666 | INFO     | did not find any defunct processes belonging to 28663
[2026-01-09 18:14:23] 2026-01-09 17:13:36,666 | INFO     | ready for new job
[2026-01-09 18:14:23] 2026-01-09 17:13:36,667 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 18:14:23] 2026-01-09 17:13:36,668 | INFO     | ***************************************
[2026-01-09 18:14:23] 2026-01-09 17:13:36,669 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 18:14:23] 2026-01-09 17:13:36,669 | INFO     | ***************************************
[2026-01-09 18:14:23] 2026-01-09 17:13:36,669 | INFO     | 
[2026-01-09 18:14:23] 2026-01-09 17:13:36,669 | INFO     | pilot is running in a VM
[2026-01-09 18:14:23] 2026-01-09 17:13:36,670 | INFO     | architecture information:
[2026-01-09 18:14:23] 2026-01-09 17:13:36,670 | INFO     | executing command: cat /etc/os-release
[2026-01-09 18:14:23] 2026-01-09 17:13:36,688 | INFO     | cat /etc/os-release:
[2026-01-09 18:14:23] NAME="CentOS Linux"
[2026-01-09 18:14:23] VERSION="7 (Core)"
[2026-01-09 18:14:23] ID="centos"
[2026-01-09 18:14:23] ID_LIKE="rhel fedora"
[2026-01-09 18:14:23] VERSION_ID="7"
[2026-01-09 18:14:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 18:14:23] ANSI_COLOR="0;31"
[2026-01-09 18:14:23] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 18:14:23] HOME_URL="https://www.centos.org/"
[2026-01-09 18:14:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 18:14:23] 
[2026-01-09 18:14:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 18:14:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 18:14:23] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 18:14:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 18:14:23] 
[2026-01-09 18:14:23] 2026-01-09 17:13:36,688 | INFO     | ***************************************
[2026-01-09 18:14:23] 2026-01-09 17:13:37,192 | INFO     | executing command: df -mP /var/lib/boinc/slots/18
[2026-01-09 18:14:23] 2026-01-09 17:13:37,219 | INFO     | sufficient remaining disk space (498111348736 B)
[2026-01-09 18:14:23] 2026-01-09 17:13:37,219 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 18:14:23] 2026-01-09 17:13:37,220 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 18:14:23] 2026-01-09 17:13:37,220 | INFO     | update_server=False
[2026-01-09 18:14:23] 2026-01-09 17:13:37,220 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 18:14:23] 2026-01-09 17:13:37,220 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 18:14:23] 2026-01-09 17:13:37,221 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 18:14:23] 2026-01-09 17:13:37,301 | INFO     | all job control threads have been joined
[2026-01-09 18:14:23] 2026-01-09 17:13:37,312 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 18:14:23] 2026-01-09 17:13:37,313 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 18:14:23] 2026-01-09 17:13:37,313 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 18:14:23] 2026-01-09 17:13:37,313 | INFO     | will abort loop
[2026-01-09 18:14:23] 2026-01-09 17:13:37,701 | INFO     | all data control threads have been joined
[2026-01-09 18:14:23] 2026-01-09 17:13:38,029 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 18:14:23] 2026-01-09 17:13:38,208 | INFO     | all payload control threads have been joined
[2026-01-09 18:14:23] 2026-01-09 17:13:38,226 | INFO     | [job] retrieve thread has finished
[2026-01-09 18:14:23] 2026-01-09 17:13:38,227 | INFO     | [job] queue monitor thread has finished
[2026-01-09 18:14:23] 2026-01-09 17:13:38,245 | INFO     | [payload] failed_post thread has finished
[2026-01-09 18:14:23] 2026-01-09 17:13:38,307 | INFO     | [job] control thread has finished
[2026-01-09 18:14:23] 2026-01-09 17:13:38,319 | INFO     | [job] job monitor thread has finished
[2026-01-09 18:14:23] 2026-01-09 17:13:38,390 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 18:14:23] 2026-01-09 17:13:38,544 | INFO     | [data] copytool_in thread has finished
[2026-01-09 18:14:23] 2026-01-09 17:13:38,704 | INFO     | [data] control thread has finished
[2026-01-09 18:14:23] 2026-01-09 17:13:38,771 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 18:14:23] 2026-01-09 17:13:39,014 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 18:14:23] 2026-01-09 17:13:39,213 | INFO     | [payload] control thread has finished
[2026-01-09 18:14:23] 2026-01-09 17:13:39,226 | INFO     | [data] copytool_out thread has finished
[2026-01-09 18:14:23] 2026-01-09 17:13:39,466 | INFO     | [job] validate thread has finished
[2026-01-09 18:14:23] 2026-01-09 17:13:39,550 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 18:14:23] 2026-01-09 17:13:39,705 | INFO     | [payload] validate_post thread has finished
[2026-01-09 18:14:23] 2026-01-09 17:13:42,036 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 18:14:23] 2026-01-09 17:14:07,660 | INFO     | PID=22232 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 18:14:23] 2026-01-09 17:14:07,661 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 18:14:23] 2026-01-09 17:14:07,661 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 18:14:23] 2026-01-09 17:14:07,661 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 18:14:23] 2026-01-09 17:14:16,864 | INFO     | [monitor] cgroup control has ended
[2026-01-09 18:14:23] 2026-01-09 17:14:17,679 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140460644382528)>', '<ExcThread(monitor, started 140459951236864)>']
[2026-01-09 18:14:23] 2026-01-09 17:14:17,713 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 18:14:23] 2026-01-09 17:14:17,713 | INFO     | [monitor] control thread has ended
[2026-01-09 18:14:23] 2026-01-09 17:14:22,705 | INFO     | all workflow threads have been joined
[2026-01-09 18:14:23] 2026-01-09 17:14:22,705 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 18:14:23] 2026-01-09 17:14:22,706 | INFO     | traces error code: 0
[2026-01-09 18:14:23] 2026-01-09 17:14:22,706 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 18:14:23] 2026-01-09 17:14:22,896 [wrapper] ==== pilot stdout END ====
[2026-01-09 18:14:23] 2026-01-09 17:14:22,902 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 18:14:23] 2026-01-09 17:14:22,906 [wrapper] pilotpid: 22232
[2026-01-09 18:14:23] 2026-01-09 17:14:22,910 [wrapper] Pilot exit status: 0
[2026-01-09 18:14:23] 2026-01-09 17:14:22,942 [wrapper] pandaids: 6963757462
[2026-01-09 18:14:23] 2026-01-09 17:14:23,008 [wrapper] cleanup supervisor_pilot 15259 22233
[2026-01-09 18:14:23] 2026-01-09 17:14:23,017 [wrapper] Test setup, not cleaning
[2026-01-09 18:14:23] 2026-01-09 17:14:23,021 [wrapper] apfmon messages muted
[2026-01-09 18:14:23] 2026-01-09 17:14:23,026 [wrapper] ==== wrapper stdout END ====
[2026-01-09 18:14:23] 2026-01-09 17:14:23,029 [wrapper] ==== wrapper stderr END ====
[2026-01-09 18:14:23]  *** Error codes and diagnostics ***
[2026-01-09 18:14:23]     "exeErrorCode": 0,
[2026-01-09 18:14:23]     "exeErrorDiag": "",
[2026-01-09 18:14:23]     "pilotErrorCode": 0,
[2026-01-09 18:14:23]     "pilotErrorDiag": "",
[2026-01-09 18:14:23]  *** Listing of results directory ***
[2026-01-09 18:14:23] total 446296
[2026-01-09 18:14:23] -rw-r--r--. 1 boinc boinc    579449 Jan  9 05:21 pilot3.tar.gz
[2026-01-09 18:14:23] -rwx------. 1 boinc boinc     36322 Jan  9 05:23 runpilot2-wrapper.sh
[2026-01-09 18:14:23] -rw-r--r--. 1 boinc boinc      5112 Jan  9 05:26 queuedata.json
[2026-01-09 18:14:23] -rw-r--r--. 1 boinc boinc       100 Jan  9 15:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 18:14:23] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 15:10 run_atlas
[2026-01-09 18:14:23] -rw-r--r--. 1 boinc boinc       105 Jan  9 15:10 job.xml
[2026-01-09 18:14:23] -rw-r--r--. 1 boinc boinc      6392 Jan  9 15:10 init_data.xml
[2026-01-09 18:14:23] -rw-r--r--. 2 boinc boinc 226875937 Jan  9 15:10 EVNT.47898824._000939.pool.root.1
[2026-01-09 18:14:23] -rw-r--r--. 2 boinc boinc     15847 Jan  9 15:10 start_atlas.sh
[2026-01-09 18:14:23] drwxrwx--x. 2 boinc boinc        68 Jan  9 15:10 shared
[2026-01-09 18:14:23] -rw-r--r--. 2 boinc boinc    592406 Jan  9 15:10 input.tar.gz
[2026-01-09 18:14:23] -rw-r--r--. 1 boinc boinc         0 Jan  9 15:10 boinc_lockfile
[2026-01-09 18:14:23] -rw-r--r--. 1 boinc boinc      2519 Jan  9 15:10 pandaJob.out
[2026-01-09 18:14:23] -rw-------. 1 boinc boinc    989377 Jan  9 15:10 agis_schedconf.cvmfs.json
[2026-01-09 18:14:23] drwx------. 5 boinc boinc      4096 Jan  9 15:10 pilot3
[2026-01-09 18:14:23] -rw-------. 1 boinc boinc 222516125 Jan  9 18:12 HITS.47898826._039768.pool.root.1
[2026-01-09 18:14:23] -rw-r--r--. 1 boinc boinc       530 Jan  9 18:12 boinc_task_state.xml
[2026-01-09 18:14:23] -rw-------. 1 boinc boinc        95 Jan  9 18:13 pilot_heartbeat.json
[2026-01-09 18:14:23] -rw-------. 1 boinc boinc      1012 Jan  9 18:13 memory_monitor_summary.json
[2026-01-09 18:14:23] -rw-------. 1 boinc boinc   1516240 Jan  9 18:13 agis_ddmendpoints.agis.ALL.json
[2026-01-09 18:14:23] -rw-------. 1 boinc boinc    397352 Jan  9 18:13 log.47898826._039768.job.log.tgz.1
[2026-01-09 18:14:23] -rw-------. 1 boinc boinc      7774 Jan  9 18:13 heartbeat.json
[2026-01-09 18:14:23] -rw-r--r--. 1 boinc boinc      8192 Jan  9 18:14 boinc_mmap_file
[2026-01-09 18:14:23] -rw-r--r--. 1 boinc boinc        28 Jan  9 18:14 wrapper_checkpoint.txt
[2026-01-09 18:14:23] -rw-------. 1 boinc boinc      4996 Jan  9 18:14 pilotlog.txt
[2026-01-09 18:14:23] -rw-------. 1 boinc boinc   1461986 Jan  9 18:14 log.47898826._039768.job.log.1
[2026-01-09 18:14:23] -rw-------. 1 boinc boinc       357 Jan  9 18:14 output.list
[2026-01-09 18:14:23] -rw-r--r--. 1 boinc boinc       620 Jan  9 18:14 runtime_log
[2026-01-09 18:14:23] -rw-------. 1 boinc boinc   1873920 Jan  9 18:14 result.tar.gz
[2026-01-09 18:14:23] -rw-------. 1 boinc boinc       657 Jan  9 18:14 xXvNDmTDJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmb3gKDmFpWdEm.diag
[2026-01-09 18:14:23] -rw-r--r--. 1 boinc boinc      8833 Jan  9 18:14 runtime_log.err
[2026-01-09 18:14:23] -rw-r--r--. 1 boinc boinc     20755 Jan  9 18:14 stderr.txt
[2026-01-09 18:14:23] HITS file was successfully produced:
[2026-01-09 18:14:23] -rw-------. 1 boinc boinc 222516125 Jan  9 18:12 shared/HITS.pool.root.1
[2026-01-09 18:14:23]  *** Contents of shared directory: ***
[2026-01-09 18:14:23] total 441292
[2026-01-09 18:14:23] -rw-r--r--. 2 boinc boinc 226875937 Jan  9 15:10 ATLAS.root_0
[2026-01-09 18:14:23] -rw-r--r--. 2 boinc boinc     15847 Jan  9 15:10 start_atlas.sh
[2026-01-09 18:14:23] -rw-r--r--. 2 boinc boinc    592406 Jan  9 15:10 input.tar.gz
[2026-01-09 18:14:23] -rw-------. 1 boinc boinc 222516125 Jan  9 18:12 HITS.pool.root.1
[2026-01-09 18:14:23] -rw-------. 1 boinc boinc   1873920 Jan  9 18:14 result.tar.gz
18:14:24 (18501): run_atlas exited; CPU time 81219.371727
18:14:24 (18501): called boinc_finish(0)

</stderr_txt>
]]>

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