Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:11:52 (29662): wrapper (7.7.26015): starting
15:11:52 (29662): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 15:11:52] Arguments: --nthreads 8
[2026-01-09 15:11:52] Threads: 8
[2026-01-09 15:11:52] Checking for CVMFS
[2026-01-09 15:11:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 15:11:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 15:11:52] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 15:11:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 15:11:53] 2.11.2.0 16377 35496 96644 154945 0 57 20914659 25165824 0 130560 0 15422876 99.831 8990760 2144 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 15:11:53] CVMFS is ok
[2026-01-09 15:11:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 15:11:53] Checking for apptainer binary...
[2026-01-09 15:11:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 15:11:53] Running /usr/bin/apptainer --version
[2026-01-09 15:11:53] apptainer version 1.3.2-1.el7
[2026-01-09 15:11:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 15:11:54] cg-vwn414.simple-grid.lan
[2026-01-09 15:11:54] apptainer works
[2026-01-09 15:11:54] Set ATHENA_PROC_NUMBER=8
[2026-01-09 15:11:54] Set ATHENA_CORE_NUMBER=8
[2026-01-09 15:11:54] Starting ATLAS job with PandaID=6963668252
[2026-01-09 15:11:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 17:58:31]  *** The last 200 lines of the pilot log: ***
[2026-01-09 17:58:31] 2026-01-09 16:57:39,870 | INFO     | time since job start (9930s) is within the limit (349056.0s)
[2026-01-09 17:58:31] 2026-01-09 16:57:41,084 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 17:58:31] 2026-01-09 16:57:41,085 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 17:58:31] 2026-01-09 16:57:41,087 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6963668252/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 17:58:31] 2026-01-09 16:57:41,087 | INFO     | extracted standard info from prmon json
[2026-01-09 17:58:31] 2026-01-09 16:57:41,088 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 17:58:31] 2026-01-09 16:57:41,088 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 17:58:31] 2026-01-09 16:57:41,088 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 17:58:31] 2026-01-09 16:57:41,088 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 17:58:31] 2026-01-09 16:57:41,092 | INFO     | fitting pss+swap vs Time
[2026-01-09 17:58:31] 2026-01-09 16:57:41,093 | INFO     | sum of square deviations: 1342841922.0
[2026-01-09 17:58:31] 2026-01-09 16:57:41,094 | INFO     | sum of deviations: 23670381134.999992
[2026-01-09 17:58:31] 2026-01-09 16:57:41,094 | INFO     | mean x: 1767972902.0
[2026-01-09 17:58:31] 2026-01-09 16:57:41,094 | INFO     | mean y: 2458513.1656441716
[2026-01-09 17:58:31] 2026-01-09 16:57:41,094 | INFO     | intersect: -31161740147.212486
[2026-01-09 17:58:31] 2026-01-09 16:57:41,095 | INFO     | chi2: 2.32980386165219
[2026-01-09 17:58:31] 2026-01-09 16:57:41,095 | INFO     | sum of square deviations: 1223016419.5
[2026-01-09 17:58:31] 2026-01-09 16:57:41,096 | INFO     | sum of deviations: 33493751137.499996
[2026-01-09 17:58:31] 2026-01-09 16:57:41,097 | INFO     | mean x: 1767972749.5
[2026-01-09 17:58:31] 2026-01-09 16:57:41,097 | INFO     | mean y: 2470674.2974683545
[2026-01-09 17:58:31] 2026-01-09 16:57:41,097 | INFO     | intersect: -48415554092.568405
[2026-01-09 17:58:31] 2026-01-09 16:57:41,097 | INFO     | chi2: 1.558158562593044
[2026-01-09 17:58:31] 2026-01-09 16:57:41,097 | INFO     | current chi2=1.558158562593044 (change=33.12061207212227 %)
[2026-01-09 17:58:31] 2026-01-09 16:57:41,098 | INFO     | sum of square deviations: 1110539892.0
[2026-01-09 17:58:31] 2026-01-09 16:57:41,099 | INFO     | sum of deviations: 32348999487.0
[2026-01-09 17:58:31] 2026-01-09 16:57:41,099 | INFO     | mean x: 1767972597.0
[2026-01-09 17:58:31] 2026-01-09 16:57:41,099 | INFO     | mean y: 2469121.6928104577
[2026-01-09 17:58:31] 2026-01-09 16:57:41,099 | INFO     | intersect: -51496936748.71158
[2026-01-09 17:58:31] 2026-01-09 16:57:41,100 | INFO     | chi2: 1.5579185645987954
[2026-01-09 17:58:31] 2026-01-09 16:57:41,100 | INFO     | current chi2=1.5579185645987954 (change=0.015402668252791758 %)
[2026-01-09 17:58:31] 2026-01-09 16:57:41,100 | INFO     | right removable region: 152
[2026-01-09 17:58:31] 2026-01-09 16:57:41,100 | INFO     | sum of square deviations: 1223016419.5
[2026-01-09 17:58:31] 2026-01-09 16:57:41,101 | INFO     | sum of deviations: 66680472.49999809
[2026-01-09 17:58:31] 2026-01-09 16:57:41,102 | INFO     | mean x: 1767973054.5
[2026-01-09 17:58:31] 2026-01-09 16:57:41,102 | INFO     | mean y: 2488102.930379747
[2026-01-09 17:58:31] 2026-01-09 16:57:41,102 | INFO     | intersect: -93904125.95688325
[2026-01-09 17:58:31] 2026-01-09 16:57:41,102 | INFO     | chi2: 0.9345358255493807
[2026-01-09 17:58:31] 2026-01-09 16:57:41,102 | INFO     | current chi2=0.9345358255493807 (change=59.88778965768171 %)
[2026-01-09 17:58:31] 2026-01-09 16:57:41,103 | INFO     | sum of square deviations: 1110539892.0
[2026-01-09 17:58:31] 2026-01-09 16:57:41,104 | INFO     | sum of deviations: -8896051205.0
[2026-01-09 17:58:31] 2026-01-09 16:57:41,104 | INFO     | mean x: 1767973207.0
[2026-01-09 17:58:31] 2026-01-09 16:57:41,104 | INFO     | mean y: 2500257.4444444445
[2026-01-09 17:58:31] 2026-01-09 16:57:41,105 | INFO     | intersect: 14164963300.726158
[2026-01-09 17:58:31] 2026-01-09 16:57:41,105 | INFO     | chi2: 0.8220854511598367
[2026-01-09 17:58:31] 2026-01-09 16:57:41,105 | INFO     | current chi2=0.8220854511598367 (change=12.032751588034463 %)
[2026-01-09 17:58:31] 2026-01-09 16:57:41,105 | INFO     | left removable region: 20
[2026-01-09 17:58:31] 2026-01-09 16:57:41,105 | INFO     | sum of square deviations: 713140813.0
[2026-01-09 17:58:31] 2026-01-09 16:57:41,106 | INFO     | sum of deviations: -1781861605.9999998
[2026-01-09 17:58:31] 2026-01-09 16:57:41,106 | INFO     | mean x: 1767973176.5
[2026-01-09 17:58:31] 2026-01-09 16:57:41,107 | INFO     | mean y: 2519529.8333333335
[2026-01-09 17:58:31] 2026-01-09 16:57:41,107 | INFO     | intersect: 4419997068.933611
[2026-01-09 17:58:31] 2026-01-09 16:57:41,107 | INFO     | chi2: 0.0027015416012196205
[2026-01-09 17:58:31] 2026-01-09 16:57:41,107 | INFO     | current memory leak: -2.50 B/s (using 132 data points, chi2=0.00)
[2026-01-09 17:58:31] 2026-01-09 16:57:41,108 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-01-09 17:58:31] 2026-01-09 16:57:41,108 | INFO     | ..............................
[2026-01-09 17:58:31] 2026-01-09 16:57:41,108 | INFO     | . Timing measurements:
[2026-01-09 17:58:31] 2026-01-09 16:57:41,108 | INFO     | . get job = 0 s
[2026-01-09 17:58:31] 2026-01-09 16:57:41,108 | INFO     | . initial setup = 2 s
[2026-01-09 17:58:31] 2026-01-09 16:57:41,109 | INFO     | . payload setup = 7 s
[2026-01-09 17:58:31] 2026-01-09 16:57:41,109 | INFO     | . stage-in = 0 s
[2026-01-09 17:58:31] 2026-01-09 16:57:41,109 | INFO     | . payload execution = 9893 s
[2026-01-09 17:58:31] 2026-01-09 16:57:41,109 | INFO     | . stage-out = 1 s
[2026-01-09 17:58:31] 2026-01-09 16:57:41,109 | INFO     | . log creation = 0 s
[2026-01-09 17:58:31] 2026-01-09 16:57:41,109 | INFO     | ..............................
[2026-01-09 17:58:31] 2026-01-09 16:57:41,226 | INFO     | 
[2026-01-09 17:58:31] 2026-01-09 16:57:41,226 | INFO     | job summary report
[2026-01-09 17:58:31] 2026-01-09 16:57:41,227 | INFO     | --------------------------------------------------
[2026-01-09 17:58:31] 2026-01-09 16:57:41,227 | INFO     | PanDA job id: 6963668252
[2026-01-09 17:58:31] 2026-01-09 16:57:41,227 | INFO     | task id: 47898826
[2026-01-09 17:58:31] 2026-01-09 16:57:41,227 | INFO     | errors: (none)
[2026-01-09 17:58:31] 2026-01-09 16:57:41,227 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 17:58:31] 2026-01-09 16:57:41,227 | INFO     | pilot state: finished 
[2026-01-09 17:58:31] 2026-01-09 16:57:41,227 | INFO     | transexitcode: 0
[2026-01-09 17:58:31] 2026-01-09 16:57:41,227 | INFO     | exeerrorcode: 0
[2026-01-09 17:58:31] 2026-01-09 16:57:41,228 | INFO     | exeerrordiag: 
[2026-01-09 17:58:31] 2026-01-09 16:57:41,228 | INFO     | exitcode: 0
[2026-01-09 17:58:31] 2026-01-09 16:57:41,228 | INFO     | exitmsg: OK
[2026-01-09 17:58:31] 2026-01-09 16:57:41,228 | INFO     | cpuconsumptiontime: 73280 s
[2026-01-09 17:58:31] 2026-01-09 16:57:41,228 | INFO     | nevents: 400
[2026-01-09 17:58:31] 2026-01-09 16:57:41,228 | INFO     | neventsw: 0
[2026-01-09 17:58:31] 2026-01-09 16:57:41,228 | INFO     | pid: 7450
[2026-01-09 17:58:31] 2026-01-09 16:57:41,228 | INFO     | pgrp: 7450
[2026-01-09 17:58:31] 2026-01-09 16:57:41,228 | INFO     | corecount: 8
[2026-01-09 17:58:31] 2026-01-09 16:57:41,229 | INFO     | event service: False
[2026-01-09 17:58:31] 2026-01-09 16:57:41,229 | INFO     | sizes: {0: 2283919, 6: 2284181, 11: 2284209, 9905: 2312550, 9907: 2321548, 9908: 2321604, 9915: 2321990}
[2026-01-09 17:58:31] 2026-01-09 16:57:41,229 | INFO     | --------------------------------------------------
[2026-01-09 17:58:31] 2026-01-09 16:57:41,229 | INFO     | 
[2026-01-09 17:58:31] 2026-01-09 16:57:41,229 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-01-09 17:58:31] 2026-01-09 16:57:41,255 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 17:58:31] 2026-01-09 16:57:41,255 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 17:58:31] 2026-01-09 16:57:41,255 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 17:58:31] 2026-01-09 16:57:41,255 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 17:58:31] 2026-01-09 16:57:41,255 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 17:58:31] 2026-01-09 16:57:41,256 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 17:58:31] 2026-01-09 16:57:41,256 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 17:58:31] 2026-01-09 16:57:41,256 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 17:58:31] 2026-01-09 16:57:41,256 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 17:58:31] 2026-01-09 16:57:41,256 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 17:58:31] 2026-01-09 16:57:41,256 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 17:58:31] 2026-01-09 16:57:41,256 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 17:58:31] 2026-01-09 16:57:41,256 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 17:58:31] 2026-01-09 16:57:41,257 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 17:58:31] 2026-01-09 16:57:41,257 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 17:58:31] 2026-01-09 16:57:41,257 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 17:58:31] 2026-01-09 16:57:41,257 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 17:58:31] 2026-01-09 16:57:41,257 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 17:58:31] 2026-01-09 16:57:41,257 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 17:58:31] 2026-01-09 16:57:41,257 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 17:58:31] 2026-01-09 16:57:41,258 | INFO     | job 6963668252 has completed (purged errors)
[2026-01-09 17:58:31] 2026-01-09 16:57:41,258 | INFO     | overall cleanup function is called
[2026-01-09 17:58:31] 2026-01-09 16:57:42,266 | INFO     | --- collectZombieJob: --- 10, [7450]
[2026-01-09 17:58:31] 2026-01-09 16:57:42,266 | INFO     | zombie collector waiting for pid 7450
[2026-01-09 17:58:31] 2026-01-09 16:57:42,266 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 17:58:31] 2026-01-09 16:57:42,266 | INFO     | collected zombie processes
[2026-01-09 17:58:31] 2026-01-09 16:57:42,266 | INFO     | will attempt to kill all subprocesses of pid=7450
[2026-01-09 17:58:31] 2026-01-09 16:57:42,327 | INFO     | process IDs to be killed: [7450] (in reverse order)
[2026-01-09 17:58:31] 2026-01-09 16:57:42,372 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 17:58:31] 2026-01-09 16:57:42,373 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 17:58:31] 2026-01-09 16:57:42,375 | INFO     | did not find any defunct processes belonging to 7450
[2026-01-09 17:58:31] 2026-01-09 16:57:42,376 | INFO     | did not find any defunct processes belonging to 7450
[2026-01-09 17:58:31] 2026-01-09 16:57:42,377 | INFO     | ready for new job
[2026-01-09 17:58:31] 2026-01-09 16:57:42,377 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 17:58:31] 2026-01-09 16:57:42,379 | INFO     | ***************************************
[2026-01-09 17:58:31] 2026-01-09 16:57:42,379 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 17:58:31] 2026-01-09 16:57:42,379 | INFO     | ***************************************
[2026-01-09 17:58:31] 2026-01-09 16:57:42,379 | INFO     | 
[2026-01-09 17:58:31] 2026-01-09 16:57:42,380 | INFO     | pilot is running in a VM
[2026-01-09 17:58:31] 2026-01-09 16:57:42,380 | INFO     | architecture information:
[2026-01-09 17:58:31] 2026-01-09 16:57:42,380 | INFO     | executing command: cat /etc/os-release
[2026-01-09 17:58:31] 2026-01-09 16:57:42,397 | INFO     | cat /etc/os-release:
[2026-01-09 17:58:31] NAME="CentOS Linux"
[2026-01-09 17:58:31] VERSION="7 (Core)"
[2026-01-09 17:58:31] ID="centos"
[2026-01-09 17:58:31] ID_LIKE="rhel fedora"
[2026-01-09 17:58:31] VERSION_ID="7"
[2026-01-09 17:58:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 17:58:31] ANSI_COLOR="0;31"
[2026-01-09 17:58:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 17:58:31] HOME_URL="https://www.centos.org/"
[2026-01-09 17:58:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 17:58:31] 
[2026-01-09 17:58:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 17:58:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 17:58:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 17:58:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 17:58:31] 
[2026-01-09 17:58:31] 2026-01-09 16:57:42,397 | INFO     | ***************************************
[2026-01-09 17:58:31] 2026-01-09 16:57:42,901 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-01-09 17:58:31] 2026-01-09 16:57:42,919 | INFO     | sufficient remaining disk space (498108203008 B)
[2026-01-09 17:58:31] 2026-01-09 16:57:42,919 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 17:58:31] 2026-01-09 16:57:42,920 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 17:58:31] 2026-01-09 16:57:42,920 | INFO     | update_server=False
[2026-01-09 17:58:31] 2026-01-09 16:57:42,920 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 17:58:31] 2026-01-09 16:57:42,920 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 17:58:31] 2026-01-09 16:57:43,228 | INFO     | all job control threads have been joined
[2026-01-09 17:58:31] 2026-01-09 16:57:43,321 | INFO     | all data control threads have been joined
[2026-01-09 17:58:31] 2026-01-09 16:57:43,346 | INFO     | all payload control threads have been joined
[2026-01-09 17:58:31] 2026-01-09 16:57:43,361 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 17:58:31] 2026-01-09 16:57:43,362 | INFO     | aborting loop
[2026-01-09 17:58:31] 2026-01-09 16:57:43,926 | INFO     | [job] retrieve thread has finished
[2026-01-09 17:58:31] 2026-01-09 16:57:43,926 | INFO     | [job] queue monitor thread has finished
[2026-01-09 17:58:31] 2026-01-09 16:57:44,012 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 17:58:31] 2026-01-09 16:57:44,022 | INFO     | [data] copytool_in thread has finished
[2026-01-09 17:58:31] 2026-01-09 16:57:44,034 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 17:58:31] 2026-01-09 16:57:44,133 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 17:58:31] 2026-01-09 16:57:44,234 | INFO     | [job] control thread has finished
[2026-01-09 17:58:31] 2026-01-09 16:57:44,310 | INFO     | [payload] failed_post thread has finished
[2026-01-09 17:58:31] 2026-01-09 16:57:44,327 | INFO     | [data] control thread has finished
[2026-01-09 17:58:31] 2026-01-09 16:57:44,352 | INFO     | [payload] control thread has finished
[2026-01-09 17:58:31] 2026-01-09 16:57:44,367 | INFO     | [job] job monitor thread has finished
[2026-01-09 17:58:31] 2026-01-09 16:57:44,384 | INFO     | [job] validate thread has finished
[2026-01-09 17:58:31] 2026-01-09 16:57:44,967 | INFO     | [payload] validate_post thread has finished
[2026-01-09 17:58:31] 2026-01-09 16:57:45,191 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 17:58:31] 2026-01-09 16:57:45,211 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 17:58:31] 2026-01-09 16:57:46,018 | INFO     | [data] copytool_out thread has finished
[2026-01-09 17:58:31] 2026-01-09 16:57:49,217 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 17:58:31] 2026-01-09 16:57:53,111 | INFO     | job.realtimelogging is not enabled
[2026-01-09 17:58:31] 2026-01-09 16:57:54,117 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 17:58:31] 2026-01-09 16:58:12,969 | INFO     | PID=1011 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-09 17:58:31] 2026-01-09 16:58:12,970 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 17:58:31] 2026-01-09 16:58:12,971 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 17:58:31] 2026-01-09 16:58:12,971 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 17:58:31] 2026-01-09 16:58:25,468 | INFO     | [monitor] cgroup control has ended
[2026-01-09 17:58:31] 2026-01-09 16:58:26,107 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139674919593792)>', '<ExcThread(monitor, started 139674700998400)>']
[2026-01-09 17:58:31] 2026-01-09 16:58:27,041 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 17:58:31] 2026-01-09 16:58:27,041 | INFO     | [monitor] control thread has ended
[2026-01-09 17:58:31] 2026-01-09 16:58:31,132 | INFO     | all workflow threads have been joined
[2026-01-09 17:58:31] 2026-01-09 16:58:31,133 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 17:58:31] 2026-01-09 16:58:31,133 | INFO     | traces error code: 0
[2026-01-09 17:58:31] 2026-01-09 16:58:31,133 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 17:58:31] 2026-01-09 16:58:31,283 [wrapper] ==== pilot stdout END ====
[2026-01-09 17:58:31] 2026-01-09 16:58:31,288 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 17:58:31] 2026-01-09 16:58:31,292 [wrapper] pilotpid: 1011
[2026-01-09 17:58:31] 2026-01-09 16:58:31,297 [wrapper] Pilot exit status: 0
[2026-01-09 17:58:31] 2026-01-09 16:58:31,324 [wrapper] pandaids: 6963668252
[2026-01-09 17:58:31] 2026-01-09 16:58:31,369 [wrapper] cleanup supervisor_pilot 26344 1012
[2026-01-09 17:58:31] 2026-01-09 16:58:31,377 [wrapper] Test setup, not cleaning
[2026-01-09 17:58:31] 2026-01-09 16:58:31,382 [wrapper] apfmon messages muted
[2026-01-09 17:58:31] 2026-01-09 16:58:31,388 [wrapper] ==== wrapper stdout END ====
[2026-01-09 17:58:31] 2026-01-09 16:58:31,394 [wrapper] ==== wrapper stderr END ====
[2026-01-09 17:58:31]  *** Error codes and diagnostics ***
[2026-01-09 17:58:31]     "exeErrorCode": 0,
[2026-01-09 17:58:31]     "exeErrorDiag": "",
[2026-01-09 17:58:31]     "pilotErrorCode": 0,
[2026-01-09 17:58:31]     "pilotErrorDiag": "",
[2026-01-09 17:58:31]  *** Listing of results directory ***
[2026-01-09 17:58:31] total 445108
[2026-01-09 17:58:31] -rw-r--r--. 1 boinc boinc    579449 Jan  9 05:21 pilot3.tar.gz
[2026-01-09 17:58:31] -rwx------. 1 boinc boinc     36322 Jan  9 05:23 runpilot2-wrapper.sh
[2026-01-09 17:58:31] -rw-r--r--. 1 boinc boinc      5112 Jan  9 05:26 queuedata.json
[2026-01-09 17:58:31] -rw-r--r--. 1 boinc boinc       100 Jan  9 15:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 17:58:31] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 15:11 run_atlas
[2026-01-09 17:58:31] -rw-r--r--. 1 boinc boinc       105 Jan  9 15:11 job.xml
[2026-01-09 17:58:31] -rw-r--r--. 1 boinc boinc      6390 Jan  9 15:11 init_data.xml
[2026-01-09 17:58:31] -rw-r--r--. 2 boinc boinc 225430513 Jan  9 15:11 EVNT.47898824._001001.pool.root.1
[2026-01-09 17:58:31] -rw-r--r--. 2 boinc boinc     15847 Jan  9 15:11 start_atlas.sh
[2026-01-09 17:58:31] drwxrwx--x. 2 boinc boinc        68 Jan  9 15:11 shared
[2026-01-09 17:58:31] -rw-r--r--. 2 boinc boinc    592398 Jan  9 15:11 input.tar.gz
[2026-01-09 17:58:31] -rw-r--r--. 1 boinc boinc         0 Jan  9 15:11 boinc_lockfile
[2026-01-09 17:58:31] -rw-r--r--. 1 boinc boinc      2519 Jan  9 15:11 pandaJob.out
[2026-01-09 17:58:31] -rw-------. 1 boinc boinc    989377 Jan  9 15:12 agis_schedconf.cvmfs.json
[2026-01-09 17:58:31] -rw-------. 1 boinc boinc   1516240 Jan  9 15:12 agis_ddmendpoints.agis.ALL.json
[2026-01-09 17:58:31] drwx------. 5 boinc boinc      4096 Jan  9 15:12 pilot3
[2026-01-09 17:58:31] -rw-------. 1 boinc boinc 222994527 Jan  9 17:56 HITS.47898826._039708.pool.root.1
[2026-01-09 17:58:31] -rw-r--r--. 1 boinc boinc       530 Jan  9 17:56 boinc_task_state.xml
[2026-01-09 17:58:31] -rw-------. 1 boinc boinc      1011 Jan  9 17:57 memory_monitor_summary.json
[2026-01-09 17:58:31] -rw-------. 1 boinc boinc    394332 Jan  9 17:57 log.47898826._039708.job.log.tgz.1
[2026-01-09 17:58:31] -rw-------. 1 boinc boinc      7770 Jan  9 17:57 heartbeat.json
[2026-01-09 17:58:31] -rw-r--r--. 1 boinc boinc      8192 Jan  9 17:58 boinc_mmap_file
[2026-01-09 17:58:31] -rw-r--r--. 1 boinc boinc        28 Jan  9 17:58 wrapper_checkpoint.txt
[2026-01-09 17:58:31] -rw-------. 1 boinc boinc        95 Jan  9 17:58 pilot_heartbeat.json
[2026-01-09 17:58:31] -rw-------. 1 boinc boinc      4880 Jan  9 17:58 pilotlog.txt
[2026-01-09 17:58:31] -rw-------. 1 boinc boinc   1337660 Jan  9 17:58 log.47898826._039708.job.log.1
[2026-01-09 17:58:31] -rw-------. 1 boinc boinc       357 Jan  9 17:58 output.list
[2026-01-09 17:58:31] -rw-r--r--. 1 boinc boinc       620 Jan  9 17:58 runtime_log
[2026-01-09 17:58:31] -rw-------. 1 boinc boinc   1751040 Jan  9 17:58 result.tar.gz
[2026-01-09 17:58:31] -rw-r--r--. 1 boinc boinc      8816 Jan  9 17:58 runtime_log.err
[2026-01-09 17:58:31] -rw-------. 1 boinc boinc       653 Jan  9 17:58 rTyMDmHDJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmtGmKDmi5O3pn.diag
[2026-01-09 17:58:31] -rw-r--r--. 1 boinc boinc     20699 Jan  9 17:58 stderr.txt
[2026-01-09 17:58:31] HITS file was successfully produced:
[2026-01-09 17:58:31] -rw-------. 1 boinc boinc 222994527 Jan  9 17:56 shared/HITS.pool.root.1
[2026-01-09 17:58:31]  *** Contents of shared directory: ***
[2026-01-09 17:58:31] total 440228
[2026-01-09 17:58:31] -rw-r--r--. 2 boinc boinc 225430513 Jan  9 15:11 ATLAS.root_0
[2026-01-09 17:58:31] -rw-r--r--. 2 boinc boinc     15847 Jan  9 15:11 start_atlas.sh
[2026-01-09 17:58:31] -rw-r--r--. 2 boinc boinc    592398 Jan  9 15:11 input.tar.gz
[2026-01-09 17:58:31] -rw-------. 1 boinc boinc 222994527 Jan  9 17:56 HITS.pool.root.1
[2026-01-09 17:58:31] -rw-------. 1 boinc boinc   1751040 Jan  9 17:58 result.tar.gz
17:58:32 (29662): run_atlas exited; CPU time 73344.064230
17:58:32 (29662): called boinc_finish(0)

</stderr_txt>
]]>

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