Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:55:00 (3237): wrapper (7.7.26015): starting
14:55:00 (3237): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 14:55:00] Arguments: --nthreads 8
[2026-01-09 14:55:00] Threads: 8
[2026-01-09 14:55:00] Checking for CVMFS
[2026-01-09 14:55:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 14:55:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 14:55:01] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 14:55:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 14:55:01] 2.11.2.0 28971 35502 96040 154945 0 57 18701628 25165825 0 130560 0 17852075 99.843 9772677 4145 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 14:55:01] CVMFS is ok
[2026-01-09 14:55:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 14:55:01] Checking for apptainer binary...
[2026-01-09 14:55:01] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 14:55:01] Running /usr/bin/apptainer --version
[2026-01-09 14:55:01] apptainer version 1.3.2-1.el7
[2026-01-09 14:55:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 14:55:02] cg-vwn489.simple-grid.lan
[2026-01-09 14:55:02] apptainer works
[2026-01-09 14:55:02] Set ATHENA_PROC_NUMBER=8
[2026-01-09 14:55:02] Set ATHENA_CORE_NUMBER=8
[2026-01-09 14:55:02] Starting ATLAS job with PandaID=6963403792
[2026-01-09 14:55:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 17:27:38]  *** The last 200 lines of the pilot log: ***
[2026-01-09 17:27:38] 2026-01-09 16:26:42,253 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 17:27:38] 2026-01-09 16:26:42,254 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2026-01-09 17:27:38] 2026-01-09 16:26:42,256 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6963403792/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 17:27:38] 2026-01-09 16:26:42,257 | INFO     | extracted standard info from prmon json
[2026-01-09 17:27:38] 2026-01-09 16:26:42,257 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 17:27:38] 2026-01-09 16:26:42,257 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 17:27:38] 2026-01-09 16:26:42,257 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 17:27:38] 2026-01-09 16:26:42,257 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 17:27:38] 2026-01-09 16:26:42,261 | INFO     | fitting pss+swap vs Time
[2026-01-09 17:27:38] 2026-01-09 16:26:42,261 | INFO     | sum of square deviations: 1025693650.0
[2026-01-09 17:27:38] 2026-01-09 16:26:42,262 | INFO     | sum of deviations: 2202639117.9999943
[2026-01-09 17:27:38] 2026-01-09 16:26:42,262 | INFO     | mean x: 1767971461.0
[2026-01-09 17:27:38] 2026-01-09 16:26:42,262 | INFO     | mean y: 2482799.1073825504
[2026-01-09 17:27:38] 2026-01-09 16:26:42,263 | INFO     | intersect: -3794170421.380237
[2026-01-09 17:27:38] 2026-01-09 16:26:42,263 | INFO     | chi2: 2.3213101291147313
[2026-01-09 17:27:38] 2026-01-09 16:26:42,263 | INFO     | sum of square deviations: 925859220.0
[2026-01-09 17:27:38] 2026-01-09 16:26:42,264 | INFO     | sum of deviations: 11822282266.000004
[2026-01-09 17:27:38] 2026-01-09 16:26:42,264 | INFO     | mean x: 1767971308.5
[2026-01-09 17:27:38] 2026-01-09 16:26:42,264 | INFO     | mean y: 2497085.861111111
[2026-01-09 17:27:38] 2026-01-09 16:26:42,265 | INFO     | intersect: -22572701600.691227
[2026-01-09 17:27:38] 2026-01-09 16:26:42,265 | INFO     | chi2: 1.5621339853117286
[2026-01-09 17:27:38] 2026-01-09 16:26:42,265 | INFO     | current chi2=1.5621339853117286 (change=32.70464098188064 %)
[2026-01-09 17:27:38] 2026-01-09 16:26:42,265 | INFO     | sum of square deviations: 832722590.0
[2026-01-09 17:27:38] 2026-01-09 16:26:42,266 | INFO     | sum of deviations: 11450189707.999996
[2026-01-09 17:27:38] 2026-01-09 16:26:42,266 | INFO     | mean x: 1767971156.0
[2026-01-09 17:27:38] 2026-01-09 16:26:42,267 | INFO     | mean y: 2496476.5755395684
[2026-01-09 17:27:38] 2026-01-09 16:26:42,267 | INFO     | intersect: -24307646394.019646
[2026-01-09 17:27:38] 2026-01-09 16:26:42,267 | INFO     | chi2: 1.564160757770854
[2026-01-09 17:27:38] 2026-01-09 16:26:42,267 | INFO     | current chi2=1.564160757770854 (change=-0.12974382979837454 %)
[2026-01-09 17:27:38] 2026-01-09 16:26:42,267 | INFO     | right removable region: 138
[2026-01-09 17:27:38] 2026-01-09 16:26:42,268 | INFO     | sum of square deviations: 925859220.0
[2026-01-09 17:27:38] 2026-01-09 16:26:42,269 | INFO     | sum of deviations: -19501461032.5
[2026-01-09 17:27:38] 2026-01-09 16:26:42,269 | INFO     | mean x: 1767971613.5
[2026-01-09 17:27:38] 2026-01-09 16:26:42,269 | INFO     | mean y: 2515411.2291666665
[2026-01-09 17:27:38] 2026-01-09 16:26:42,269 | INFO     | intersect: 37241470084.312614
[2026-01-09 17:27:38] 2026-01-09 16:26:42,269 | INFO     | chi2: 0.8942169820566834
[2026-01-09 17:27:38] 2026-01-09 16:26:42,269 | INFO     | current chi2=0.8942169820566834 (change=61.47791840301377 %)
[2026-01-09 17:27:38] 2026-01-09 16:26:42,270 | INFO     | sum of square deviations: 832722590.0
[2026-01-09 17:27:38] 2026-01-09 16:26:42,271 | INFO     | sum of deviations: -17644272265.0
[2026-01-09 17:27:38] 2026-01-09 16:26:42,271 | INFO     | mean x: 1767971766.0
[2026-01-09 17:27:38] 2026-01-09 16:26:42,271 | INFO     | mean y: 2512274.45323741
[2026-01-09 17:27:38] 2026-01-09 16:26:42,271 | INFO     | intersect: 37463457336.76609
[2026-01-09 17:27:38] 2026-01-09 16:26:42,271 | INFO     | chi2: 0.877959026241011
[2026-01-09 17:27:38] 2026-01-09 16:26:42,271 | INFO     | current chi2=0.877959026241011 (change=1.8181220153389896 %)
[2026-01-09 17:27:38] 2026-01-09 16:26:42,272 | INFO     | left removable region: 20
[2026-01-09 17:27:38] 2026-01-09 16:26:42,272 | INFO     | sum of square deviations: 509440249.5
[2026-01-09 17:27:38] 2026-01-09 16:26:42,272 | INFO     | sum of deviations: 1841216130.9999998
[2026-01-09 17:27:38] 2026-01-09 16:26:42,273 | INFO     | mean x: 1767971735.5
[2026-01-09 17:27:38] 2026-01-09 16:26:42,273 | INFO     | mean y: 2508723.305084746
[2026-01-09 17:27:38] 2026-01-09 16:26:42,273 | INFO     | intersect: -6387284940.916699
[2026-01-09 17:27:38] 2026-01-09 16:26:42,273 | INFO     | chi2: 0.0005736921578911754
[2026-01-09 17:27:38] 2026-01-09 16:26:42,273 | INFO     | current memory leak: 3.61 B/s (using 118 data points, chi2=0.00)
[2026-01-09 17:27:38] 2026-01-09 16:26:42,274 | INFO     | could have reported an average CPU frequency of 2249 MHz (8 samples)
[2026-01-09 17:27:38] 2026-01-09 16:26:42,274 | INFO     | ..............................
[2026-01-09 17:27:38] 2026-01-09 16:26:42,274 | INFO     | . Timing measurements:
[2026-01-09 17:27:38] 2026-01-09 16:26:42,274 | INFO     | . get job = 0 s
[2026-01-09 17:27:38] 2026-01-09 16:26:42,274 | INFO     | . initial setup = 2 s
[2026-01-09 17:27:38] 2026-01-09 16:26:42,275 | INFO     | . payload setup = 7 s
[2026-01-09 17:27:38] 2026-01-09 16:26:42,275 | INFO     | . stage-in = 0 s
[2026-01-09 17:27:38] 2026-01-09 16:26:42,275 | INFO     | . payload execution = 9051 s
[2026-01-09 17:27:38] 2026-01-09 16:26:42,275 | INFO     | . stage-out = 0 s
[2026-01-09 17:27:38] 2026-01-09 16:26:42,275 | INFO     | . log creation = 0 s
[2026-01-09 17:27:38] 2026-01-09 16:26:42,275 | INFO     | ..............................
[2026-01-09 17:27:38] 2026-01-09 16:26:42,454 | INFO     | PID=6965 has CPU usage=8.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-09 17:27:38] 2026-01-09 16:26:42,491 | INFO     | 
[2026-01-09 17:27:38] 2026-01-09 16:26:42,491 | INFO     | job summary report
[2026-01-09 17:27:38] 2026-01-09 16:26:42,492 | INFO     | --------------------------------------------------
[2026-01-09 17:27:38] 2026-01-09 16:26:42,492 | INFO     | PanDA job id: 6963403792
[2026-01-09 17:27:38] 2026-01-09 16:26:42,492 | INFO     | task id: 47898826
[2026-01-09 17:27:38] 2026-01-09 16:26:42,492 | INFO     | errors: (none)
[2026-01-09 17:27:38] 2026-01-09 16:26:42,492 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 17:27:38] 2026-01-09 16:26:42,492 | INFO     | pilot state: finished 
[2026-01-09 17:27:38] 2026-01-09 16:26:42,492 | INFO     | transexitcode: 0
[2026-01-09 17:27:38] 2026-01-09 16:26:42,492 | INFO     | exeerrorcode: 0
[2026-01-09 17:27:38] 2026-01-09 16:26:42,492 | INFO     | exeerrordiag: 
[2026-01-09 17:27:38] 2026-01-09 16:26:42,492 | INFO     | exitcode: 0
[2026-01-09 17:27:38] 2026-01-09 16:26:42,493 | INFO     | exitmsg: OK
[2026-01-09 17:27:38] 2026-01-09 16:26:42,493 | INFO     | cpuconsumptiontime: 68119 s
[2026-01-09 17:27:38] 2026-01-09 16:26:42,493 | INFO     | nevents: 400
[2026-01-09 17:27:38] 2026-01-09 16:26:42,493 | INFO     | neventsw: 0
[2026-01-09 17:27:38] 2026-01-09 16:26:42,493 | INFO     | pid: 13404
[2026-01-09 17:27:38] 2026-01-09 16:26:42,493 | INFO     | pgrp: 13404
[2026-01-09 17:27:38] 2026-01-09 16:26:42,493 | INFO     | corecount: 8
[2026-01-09 17:27:38] 2026-01-09 16:26:42,493 | INFO     | event service: False
[2026-01-09 17:27:38] 2026-01-09 16:26:42,493 | INFO     | sizes: {0: 2283916, 1: 2283944, 5: 2284206, 12: 2284262, 9062: 2312111, 9063: 2321295, 9069: 2321433}
[2026-01-09 17:27:38] 2026-01-09 16:26:42,493 | INFO     | --------------------------------------------------
[2026-01-09 17:27:38] 2026-01-09 16:26:42,494 | INFO     | 
[2026-01-09 17:27:38] 2026-01-09 16:26:42,494 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2026-01-09 17:27:38] 2026-01-09 16:26:42,516 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 17:27:38] 2026-01-09 16:26:42,517 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 17:27:38] 2026-01-09 16:26:42,517 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 17:27:38] 2026-01-09 16:26:42,517 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 17:27:38] 2026-01-09 16:26:42,518 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 17:27:38] 2026-01-09 16:26:42,518 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 17:27:38] 2026-01-09 16:26:42,518 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 17:27:38] 2026-01-09 16:26:42,518 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 17:27:38] 2026-01-09 16:26:42,518 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 17:27:38] 2026-01-09 16:26:42,518 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 17:27:38] 2026-01-09 16:26:42,518 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 17:27:38] 2026-01-09 16:26:42,518 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 17:27:38] 2026-01-09 16:26:42,518 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 17:27:38] 2026-01-09 16:26:42,519 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 17:27:38] 2026-01-09 16:26:42,519 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 17:27:38] 2026-01-09 16:26:42,519 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 17:27:38] 2026-01-09 16:26:42,519 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 17:27:38] 2026-01-09 16:26:42,519 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 17:27:38] 2026-01-09 16:26:42,519 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 17:27:38] 2026-01-09 16:26:42,519 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 17:27:38] 2026-01-09 16:26:42,519 | INFO     | job 6963403792 has completed (purged errors)
[2026-01-09 17:27:38] 2026-01-09 16:26:42,519 | INFO     | overall cleanup function is called
[2026-01-09 17:27:38] 2026-01-09 16:26:43,527 | INFO     | --- collectZombieJob: --- 10, [13404]
[2026-01-09 17:27:38] 2026-01-09 16:26:43,528 | INFO     | zombie collector waiting for pid 13404
[2026-01-09 17:27:38] 2026-01-09 16:26:43,528 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 17:27:38] 2026-01-09 16:26:43,528 | INFO     | collected zombie processes
[2026-01-09 17:27:38] 2026-01-09 16:26:43,528 | INFO     | will attempt to kill all subprocesses of pid=13404
[2026-01-09 17:27:38] 2026-01-09 16:26:43,587 | INFO     | process IDs to be killed: [13404] (in reverse order)
[2026-01-09 17:27:38] 2026-01-09 16:26:43,639 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 17:27:38] 2026-01-09 16:26:43,639 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 17:27:38] 2026-01-09 16:26:43,641 | INFO     | did not find any defunct processes belonging to 13404
[2026-01-09 17:27:38] 2026-01-09 16:26:43,643 | INFO     | did not find any defunct processes belonging to 13404
[2026-01-09 17:27:38] 2026-01-09 16:26:43,643 | INFO     | ready for new job
[2026-01-09 17:27:38] 2026-01-09 16:26:43,643 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 17:27:38] 2026-01-09 16:26:43,645 | INFO     | ***************************************
[2026-01-09 17:27:38] 2026-01-09 16:26:43,645 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 17:27:38] 2026-01-09 16:26:43,645 | INFO     | ***************************************
[2026-01-09 17:27:38] 2026-01-09 16:26:43,645 | INFO     | 
[2026-01-09 17:27:38] 2026-01-09 16:26:43,646 | INFO     | pilot is running in a VM
[2026-01-09 17:27:38] 2026-01-09 16:26:43,646 | INFO     | architecture information:
[2026-01-09 17:27:38] 2026-01-09 16:26:43,646 | INFO     | executing command: cat /etc/os-release
[2026-01-09 17:27:38] 2026-01-09 16:26:43,663 | INFO     | cat /etc/os-release:
[2026-01-09 17:27:38] NAME="CentOS Linux"
[2026-01-09 17:27:38] VERSION="7 (Core)"
[2026-01-09 17:27:38] ID="centos"
[2026-01-09 17:27:38] ID_LIKE="rhel fedora"
[2026-01-09 17:27:38] VERSION_ID="7"
[2026-01-09 17:27:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 17:27:38] ANSI_COLOR="0;31"
[2026-01-09 17:27:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 17:27:38] HOME_URL="https://www.centos.org/"
[2026-01-09 17:27:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 17:27:38] 
[2026-01-09 17:27:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 17:27:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 17:27:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 17:27:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 17:27:38] 
[2026-01-09 17:27:38] 2026-01-09 16:26:43,664 | INFO     | ***************************************
[2026-01-09 17:27:38] 2026-01-09 16:26:44,167 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2026-01-09 17:27:38] 2026-01-09 16:26:44,185 | INFO     | sufficient remaining disk space (499039338496 B)
[2026-01-09 17:27:38] 2026-01-09 16:26:44,185 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 17:27:38] 2026-01-09 16:26:44,185 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 17:27:38] 2026-01-09 16:26:44,185 | INFO     | update_server=False
[2026-01-09 17:27:38] 2026-01-09 16:26:44,185 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 17:27:38] 2026-01-09 16:26:44,186 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 17:27:38] 2026-01-09 16:26:44,281 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 17:27:38] 2026-01-09 16:26:44,690 | INFO     | all payload control threads have been joined
[2026-01-09 17:27:38] 2026-01-09 16:26:44,930 | INFO     | all job control threads have been joined
[2026-01-09 17:27:38] 2026-01-09 16:26:44,932 | INFO     | all data control threads have been joined
[2026-01-09 17:27:38] 2026-01-09 16:26:45,050 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 17:27:38] 2026-01-09 16:26:45,051 | INFO     | aborting loop
[2026-01-09 17:27:38] 2026-01-09 16:26:45,191 | INFO     | [job] retrieve thread has finished
[2026-01-09 17:27:38] 2026-01-09 16:26:45,192 | INFO     | [job] queue monitor thread has finished
[2026-01-09 17:27:38] 2026-01-09 16:26:45,202 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 17:27:38] 2026-01-09 16:26:45,327 | INFO     | [data] copytool_in thread has finished
[2026-01-09 17:27:38] 2026-01-09 16:26:45,395 | INFO     | [payload] failed_post thread has finished
[2026-01-09 17:27:38] 2026-01-09 16:26:45,424 | INFO     | [job] validate thread has finished
[2026-01-09 17:27:38] 2026-01-09 16:26:45,696 | INFO     | [payload] control thread has finished
[2026-01-09 17:27:38] 2026-01-09 16:26:45,709 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 17:27:38] 2026-01-09 16:26:45,810 | INFO     | [payload] validate_post thread has finished
[2026-01-09 17:27:38] 2026-01-09 16:26:45,936 | INFO     | [job] control thread has finished
[2026-01-09 17:27:38] 2026-01-09 16:26:45,938 | INFO     | [data] control thread has finished
[2026-01-09 17:27:38] 2026-01-09 16:26:46,056 | INFO     | [job] job monitor thread has finished
[2026-01-09 17:27:38] 2026-01-09 16:26:46,287 | INFO     | [data] copytool_out thread has finished
[2026-01-09 17:27:38] 2026-01-09 16:26:46,605 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 17:27:38] 2026-01-09 16:26:46,888 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 17:27:38] 2026-01-09 16:26:50,894 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 17:27:38] 2026-01-09 16:26:54,294 | INFO     | job.realtimelogging is not enabled
[2026-01-09 17:27:38] 2026-01-09 16:26:55,300 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 17:27:38] 2026-01-09 16:27:14,531 | INFO     | PID=6965 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-09 17:27:38] 2026-01-09 16:27:14,532 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 17:27:38] 2026-01-09 16:27:14,532 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 17:27:38] 2026-01-09 16:27:14,532 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 17:27:38] 2026-01-09 16:27:31,637 | INFO     | [monitor] cgroup control has ended
[2026-01-09 17:27:38] 2026-01-09 16:27:32,642 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139643833165632)>', '<ExcThread(monitor, started 139643362187008)>']
[2026-01-09 17:27:38] 2026-01-09 16:27:33,629 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 17:27:38] 2026-01-09 16:27:33,629 | INFO     | [monitor] control thread has ended
[2026-01-09 17:27:38] 2026-01-09 16:27:37,668 | INFO     | all workflow threads have been joined
[2026-01-09 17:27:38] 2026-01-09 16:27:37,668 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 17:27:38] 2026-01-09 16:27:37,669 | INFO     | traces error code: 0
[2026-01-09 17:27:38] 2026-01-09 16:27:37,669 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 17:27:38] 2026-01-09 16:27:37,794 [wrapper] ==== pilot stdout END ====
[2026-01-09 17:27:38] 2026-01-09 16:27:37,799 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 17:27:38] 2026-01-09 16:27:37,803 [wrapper] pilotpid: 6965
[2026-01-09 17:27:38] 2026-01-09 16:27:37,810 [wrapper] Pilot exit status: 0
[2026-01-09 17:27:38] 2026-01-09 16:27:37,848 [wrapper] pandaids: 6963403792
[2026-01-09 17:27:38] 2026-01-09 16:27:37,882 [wrapper] cleanup supervisor_pilot 29943 6966
[2026-01-09 17:27:38] 2026-01-09 16:27:37,887 [wrapper] Test setup, not cleaning
[2026-01-09 17:27:38] 2026-01-09 16:27:37,893 [wrapper] apfmon messages muted
[2026-01-09 17:27:38] 2026-01-09 16:27:37,897 [wrapper] ==== wrapper stdout END ====
[2026-01-09 17:27:38] 2026-01-09 16:27:37,902 [wrapper] ==== wrapper stderr END ====
[2026-01-09 17:27:38]  *** Error codes and diagnostics ***
[2026-01-09 17:27:38]     "exeErrorCode": 0,
[2026-01-09 17:27:38]     "exeErrorDiag": "",
[2026-01-09 17:27:38]     "pilotErrorCode": 0,
[2026-01-09 17:27:38]     "pilotErrorDiag": "",
[2026-01-09 17:27:38]  *** Listing of results directory ***
[2026-01-09 17:27:38] total 448076
[2026-01-09 17:27:38] -rw-r--r--. 1 boinc boinc    579449 Jan  9 05:21 pilot3.tar.gz
[2026-01-09 17:27:38] -rwx------. 1 boinc boinc     36322 Jan  9 05:23 runpilot2-wrapper.sh
[2026-01-09 17:27:38] -rw-r--r--. 1 boinc boinc      5112 Jan  9 05:24 queuedata.json
[2026-01-09 17:27:38] -rw-r--r--. 1 boinc boinc       100 Jan  9 14:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 17:27:38] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 14:55 run_atlas
[2026-01-09 17:27:38] -rw-r--r--. 1 boinc boinc       105 Jan  9 14:55 job.xml
[2026-01-09 17:27:38] -rw-r--r--. 2 boinc boinc 226194519 Jan  9 14:55 EVNT.47898824._000367.pool.root.1
[2026-01-09 17:27:38] -rw-r--r--. 2 boinc boinc     15847 Jan  9 14:55 start_atlas.sh
[2026-01-09 17:27:38] drwxrwx--x. 2 boinc boinc        68 Jan  9 14:55 shared
[2026-01-09 17:27:38] -rw-r--r--. 2 boinc boinc    592401 Jan  9 14:55 input.tar.gz
[2026-01-09 17:27:38] -rw-r--r--. 1 boinc boinc      6391 Jan  9 14:55 init_data.xml
[2026-01-09 17:27:38] -rw-r--r--. 1 boinc boinc         0 Jan  9 14:55 boinc_lockfile
[2026-01-09 17:27:38] -rw-r--r--. 1 boinc boinc      2517 Jan  9 14:55 pandaJob.out
[2026-01-09 17:27:38] -rw-------. 1 boinc boinc    989377 Jan  9 14:55 agis_schedconf.cvmfs.json
[2026-01-09 17:27:38] -rw-------. 1 boinc boinc   1516240 Jan  9 14:55 agis_ddmendpoints.agis.ALL.json
[2026-01-09 17:27:38] drwx------. 5 boinc boinc      4096 Jan  9 14:55 pilot3
[2026-01-09 17:27:38] -rw-------. 1 boinc boinc 225516832 Jan  9 17:25 HITS.47898826._039560.pool.root.1
[2026-01-09 17:27:38] -rw-r--r--. 1 boinc boinc       530 Jan  9 17:26 boinc_task_state.xml
[2026-01-09 17:27:38] -rw-------. 1 boinc boinc      1015 Jan  9 17:26 memory_monitor_summary.json
[2026-01-09 17:27:38] -rw-------. 1 boinc boinc    387506 Jan  9 17:26 log.47898826._039560.job.log.tgz.1
[2026-01-09 17:27:38] -rw-------. 1 boinc boinc      7763 Jan  9 17:26 heartbeat.json
[2026-01-09 17:27:38] -rw-r--r--. 1 boinc boinc      8192 Jan  9 17:27 boinc_mmap_file
[2026-01-09 17:27:38] -rw-r--r--. 1 boinc boinc        27 Jan  9 17:27 wrapper_checkpoint.txt
[2026-01-09 17:27:38] -rw-------. 1 boinc boinc        95 Jan  9 17:27 pilot_heartbeat.json
[2026-01-09 17:27:38] -rw-------. 1 boinc boinc      4881 Jan  9 17:27 pilotlog.txt
[2026-01-09 17:27:38] -rw-------. 1 boinc boinc   1221269 Jan  9 17:27 log.47898826._039560.job.log.1
[2026-01-09 17:27:38] -rw-------. 1 boinc boinc       357 Jan  9 17:27 output.list
[2026-01-09 17:27:38] -rw-r--r--. 1 boinc boinc       620 Jan  9 17:27 runtime_log
[2026-01-09 17:27:38] -rw-------. 1 boinc boinc   1628160 Jan  9 17:27 result.tar.gz
[2026-01-09 17:27:38] -rw-------. 1 boinc boinc       652 Jan  9 17:27 ztjMDmHDJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmt2gKDmD55Dtn.diag
[2026-01-09 17:27:38] -rw-r--r--. 1 boinc boinc      8832 Jan  9 17:27 runtime_log.err
[2026-01-09 17:27:38] -rw-r--r--. 1 boinc boinc     20803 Jan  9 17:27 stderr.txt
[2026-01-09 17:27:38] HITS file was successfully produced:
[2026-01-09 17:27:38] -rw-------. 1 boinc boinc 225516832 Jan  9 17:25 shared/HITS.pool.root.1
[2026-01-09 17:27:38]  *** Contents of shared directory: ***
[2026-01-09 17:27:38] total 443316
[2026-01-09 17:27:38] -rw-r--r--. 2 boinc boinc 226194519 Jan  9 14:55 ATLAS.root_0
[2026-01-09 17:27:38] -rw-r--r--. 2 boinc boinc     15847 Jan  9 14:55 start_atlas.sh
[2026-01-09 17:27:38] -rw-r--r--. 2 boinc boinc    592401 Jan  9 14:55 input.tar.gz
[2026-01-09 17:27:38] -rw-------. 1 boinc boinc 225516832 Jan  9 17:25 HITS.pool.root.1
[2026-01-09 17:27:38] -rw-------. 1 boinc boinc   1628160 Jan  9 17:27 result.tar.gz
17:27:39 (3237): run_atlas exited; CPU time 68174.803128
17:27:39 (3237): called boinc_finish(0)

</stderr_txt>
]]>

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