Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
08:34:41 (558533): wrapper (7.7.26015): starting
08:34:41 (558533): wrapper: running run_atlas (--nthreads 3)
[2026-01-10 08:34:41] Arguments: --nthreads 3
[2026-01-10 08:34:41] Threads: 3
[2026-01-10 08:34:41] Checking for CVMFS
[2026-01-10 08:34:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:34:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:34:41] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:34:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:34:41] 2.9.2.0 3516 2324 86628 154972 0 57 16823935 36864000 0 130560 0 1452105 99.988 82274 4837 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-10 08:34:41] CVMFS is ok
[2026-01-10 08:34:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:34:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:34:41] Further information can be found at the LHC@home message board.
[2026-01-10 08:34:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:34:41] Checking for apptainer binary...
[2026-01-10 08:34:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:34:41] Running /usr/bin/apptainer --version
[2026-01-10 08:34:41] apptainer version 1.4.1-1.1
[2026-01-10 08:34:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:34:41] thA352a
[2026-01-10 08:34:41] apptainer works
[2026-01-10 08:34:41] Set ATHENA_PROC_NUMBER=3
[2026-01-10 08:34:41] Set ATHENA_CORE_NUMBER=3
[2026-01-10 08:34:41] Starting ATLAS job with PandaID=6963402573
[2026-01-10 08:34:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 10:35:01]  *** The last 200 lines of the pilot log: ***
[2026-01-10 10:35:01] 2026-01-10 09:33:50,398 | INFO     | executing command: lscpu
[2026-01-10 10:35:01] 2026-01-10 09:33:50,411 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 10:35:01] 2026-01-10 09:33:50,639 | INFO     | monitor loop #548: job 0:6963402573 is in state 'finished'
[2026-01-10 10:35:01] 2026-01-10 09:33:50,640 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 10:35:01] 2026-01-10 09:33:52,083 | INFO     | time since job start (7146s) is within the limit (349056.0s)
[2026-01-10 10:35:01] 2026-01-10 09:33:53,142 | INFO     | monitor loop #549: job 0:6963402573 is in state 'finished'
[2026-01-10 10:35:01] 2026-01-10 09:33:53,142 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 10:35:01] 2026-01-10 09:33:54,088 | INFO     | time since job start (7148s) is within the limit (349056.0s)
[2026-01-10 10:35:01] 2026-01-10 09:33:54,566 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 10:35:01] 2026-01-10 09:33:54,567 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3640.6129166666665
[2026-01-10 10:35:01] 2026-01-10 09:33:54,569 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6963402573/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 10:35:01] 2026-01-10 09:33:54,569 | INFO     | extracted standard info from prmon json
[2026-01-10 10:35:01] 2026-01-10 09:33:54,569 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 10:35:01] 2026-01-10 09:33:54,569 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 10:35:01] 2026-01-10 09:33:54,569 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 10:35:01] 2026-01-10 09:33:54,569 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 10:35:01] 2026-01-10 09:33:54,570 | INFO     | fitting pss+swap vs Time
[2026-01-10 10:35:01] 2026-01-10 09:33:54,570 | INFO     | sum of square deviations: 496597218.0
[2026-01-10 10:35:01] 2026-01-10 09:33:54,570 | INFO     | sum of deviations: -8388995354.0
[2026-01-10 10:35:01] 2026-01-10 09:33:54,570 | INFO     | mean x: 1768034044.0
[2026-01-10 10:35:01] 2026-01-10 09:33:54,570 | INFO     | mean y: 2412985.358974359
[2026-01-10 10:35:01] 2026-01-10 09:33:54,570 | INFO     | intersect: 29869735723.421177
[2026-01-10 10:35:01] 2026-01-10 09:33:54,570 | INFO     | chi2: 1.5648696256732035
[2026-01-10 10:35:01] 2026-01-10 09:33:54,571 | INFO     | sum of square deviations: 435610028.0
[2026-01-10 10:35:01] 2026-01-10 09:33:54,571 | INFO     | sum of deviations: -7418974909.500001
[2026-01-10 10:35:01] 2026-01-10 09:33:54,571 | INFO     | mean x: 1768033891.5
[2026-01-10 10:35:01] 2026-01-10 09:33:54,571 | INFO     | mean y: 2415412.526785714
[2026-01-10 10:35:01] 2026-01-10 09:33:54,571 | INFO     | intersect: 30114208615.285995
[2026-01-10 10:35:01] 2026-01-10 09:33:54,571 | INFO     | chi2: 1.5644772485390346
[2026-01-10 10:35:01] 2026-01-10 09:33:54,571 | INFO     | current chi2=1.5644772485390346 (change=0.025074110183469965 %)
[2026-01-10 10:35:01] 2026-01-10 09:33:54,571 | INFO     | right removable region: 111
[2026-01-10 10:35:01] 2026-01-10 09:33:54,571 | INFO     | sum of square deviations: 435610028.0
[2026-01-10 10:35:01] 2026-01-10 09:33:54,571 | INFO     | sum of deviations: -22553331201.0
[2026-01-10 10:35:01] 2026-01-10 09:33:54,571 | INFO     | mean x: 1768034196.5
[2026-01-10 10:35:01] 2026-01-10 09:33:54,571 | INFO     | mean y: 2447429.089285714
[2026-01-10 10:35:01] 2026-01-10 09:33:54,571 | INFO     | intersect: 91540883748.92169
[2026-01-10 10:35:01] 2026-01-10 09:33:54,571 | INFO     | chi2: 0.11114423559990955
[2026-01-10 10:35:01] 2026-01-10 09:33:54,571 | INFO     | current chi2=0.11114423559990955 (change=92.89754023105309 %)
[2026-01-10 10:35:01] 2026-01-10 09:33:54,571 | INFO     | sum of square deviations: 379832238.0
[2026-01-10 10:35:01] 2026-01-10 09:33:54,572 | INFO     | sum of deviations: -17875059115.999996
[2026-01-10 10:35:01] 2026-01-10 09:33:54,572 | INFO     | mean x: 1768034349.0
[2026-01-10 10:35:01] 2026-01-10 09:33:54,572 | INFO     | mean y: 2434619.3457943927
[2026-01-10 10:35:01] 2026-01-10 09:33:54,572 | INFO     | intersect: 83206847899.01472
[2026-01-10 10:35:01] 2026-01-10 09:33:54,572 | INFO     | chi2: 0.10062476386129315
[2026-01-10 10:35:01] 2026-01-10 09:33:54,572 | INFO     | current chi2=0.10062476386129315 (change=9.464702943734991 %)
[2026-01-10 10:35:01] 2026-01-10 09:33:54,572 | INFO     | left removable region: 20
[2026-01-10 10:35:01] 2026-01-10 09:33:54,572 | INFO     | sum of square deviations: 233641590.0
[2026-01-10 10:35:01] 2026-01-10 09:33:54,572 | INFO     | sum of deviations: -9147758189.0
[2026-01-10 10:35:01] 2026-01-10 09:33:54,572 | INFO     | mean x: 1768034471.0
[2026-01-10 10:35:01] 2026-01-10 09:33:54,572 | INFO     | mean y: 2413760.5934065934
[2026-01-10 10:35:01] 2026-01-10 09:33:54,572 | INFO     | intersect: 69226184282.4621
[2026-01-10 10:35:01] 2026-01-10 09:33:54,572 | INFO     | chi2: 0.06909017955229922
[2026-01-10 10:35:01] 2026-01-10 09:33:54,572 | INFO     | current memory leak: -39.15 B/s (using 91 data points, chi2=0.07)
[2026-01-10 10:35:01] 2026-01-10 09:33:54,572 | INFO     | could have reported an average CPU frequency of 3903 MHz (7 samples)
[2026-01-10 10:35:01] 2026-01-10 09:33:54,572 | INFO     | ..............................
[2026-01-10 10:35:01] 2026-01-10 09:33:54,572 | INFO     | . Timing measurements:
[2026-01-10 10:35:01] 2026-01-10 09:33:54,572 | INFO     | . get job = 0 s
[2026-01-10 10:35:01] 2026-01-10 09:33:54,573 | INFO     | . initial setup = 1 s
[2026-01-10 10:35:01] 2026-01-10 09:33:54,573 | INFO     | . payload setup = 2 s
[2026-01-10 10:35:01] 2026-01-10 09:33:54,573 | INFO     | . stage-in = 0 s
[2026-01-10 10:35:01] 2026-01-10 09:33:54,573 | INFO     | . payload execution = 7122 s
[2026-01-10 10:35:01] 2026-01-10 09:33:54,573 | INFO     | . stage-out = 0 s
[2026-01-10 10:35:01] 2026-01-10 09:33:54,573 | INFO     | . log creation = 0 s
[2026-01-10 10:35:01] 2026-01-10 09:33:54,573 | INFO     | ..............................
[2026-01-10 10:35:01] 2026-01-10 09:33:54,603 | INFO     | 
[2026-01-10 10:35:01] 2026-01-10 09:33:54,603 | INFO     | job summary report
[2026-01-10 10:35:01] 2026-01-10 09:33:54,603 | INFO     | --------------------------------------------------
[2026-01-10 10:35:01] 2026-01-10 09:33:54,603 | INFO     | PanDA job id: 6963402573
[2026-01-10 10:35:01] 2026-01-10 09:33:54,603 | INFO     | task id: 47898826
[2026-01-10 10:35:01] 2026-01-10 09:33:54,603 | INFO     | errors: (none)
[2026-01-10 10:35:01] 2026-01-10 09:33:54,603 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 10:35:01] 2026-01-10 09:33:54,603 | INFO     | pilot state: finished 
[2026-01-10 10:35:01] 2026-01-10 09:33:54,603 | INFO     | transexitcode: 0
[2026-01-10 10:35:01] 2026-01-10 09:33:54,603 | INFO     | exeerrorcode: 0
[2026-01-10 10:35:01] 2026-01-10 09:33:54,603 | INFO     | exeerrordiag: 
[2026-01-10 10:35:01] 2026-01-10 09:33:54,603 | INFO     | exitcode: 0
[2026-01-10 10:35:01] 2026-01-10 09:33:54,604 | INFO     | exitmsg: OK
[2026-01-10 10:35:01] 2026-01-10 09:33:54,604 | INFO     | cpuconsumptiontime: 20784 s
[2026-01-10 10:35:01] 2026-01-10 09:33:54,604 | INFO     | nevents: 400
[2026-01-10 10:35:01] 2026-01-10 09:33:54,604 | INFO     | neventsw: 0
[2026-01-10 10:35:01] 2026-01-10 09:33:54,604 | INFO     | pid: 568706
[2026-01-10 10:35:01] 2026-01-10 09:33:54,604 | INFO     | pgrp: 568706
[2026-01-10 10:35:01] 2026-01-10 09:33:54,604 | INFO     | corecount: 3
[2026-01-10 10:35:01] 2026-01-10 09:33:54,604 | INFO     | event service: False
[2026-01-10 10:35:01] 2026-01-10 09:33:54,604 | INFO     | sizes: {0: 2283968, 3: 2284230, 11: 2284258, 7129: 2320694, 7131: 2320694, 7135: 2320888}
[2026-01-10 10:35:01] 2026-01-10 09:33:54,604 | INFO     | --------------------------------------------------
[2026-01-10 10:35:01] 2026-01-10 09:33:54,604 | INFO     | 
[2026-01-10 10:35:01] 2026-01-10 09:33:54,604 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-01-10 10:35:01] 2026-01-10 09:33:54,616 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 10:35:01] 2026-01-10 09:33:54,616 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 10:35:01] 2026-01-10 09:33:54,616 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 10:35:01] 2026-01-10 09:33:54,616 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 10:35:01] 2026-01-10 09:33:54,616 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 10:35:01] 2026-01-10 09:33:54,616 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 10:35:01] 2026-01-10 09:33:54,616 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 10:35:01] 2026-01-10 09:33:54,616 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 10:35:01] 2026-01-10 09:33:54,616 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 10:35:01] 2026-01-10 09:33:54,616 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 10:35:01] 2026-01-10 09:33:54,616 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 10:35:01] 2026-01-10 09:33:54,616 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 10:35:01] 2026-01-10 09:33:54,616 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 10:35:01] 2026-01-10 09:33:54,616 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 10:35:01] 2026-01-10 09:33:54,616 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 10:35:01] 2026-01-10 09:33:54,616 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 10:35:01] 2026-01-10 09:33:54,616 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 10:35:01] 2026-01-10 09:33:54,616 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 10:35:01] 2026-01-10 09:33:54,617 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 10:35:01] 2026-01-10 09:33:54,617 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 10:35:01] 2026-01-10 09:33:54,617 | INFO     | job 6963402573 has completed (purged errors)
[2026-01-10 10:35:01] 2026-01-10 09:33:54,617 | INFO     | overall cleanup function is called
[2026-01-10 10:35:01] 2026-01-10 09:33:55,623 | INFO     | --- collectZombieJob: --- 10, [568706]
[2026-01-10 10:35:01] 2026-01-10 09:33:55,623 | INFO     | zombie collector waiting for pid 568706
[2026-01-10 10:35:01] 2026-01-10 09:33:55,623 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 10:35:01] 2026-01-10 09:33:55,623 | INFO     | collected zombie processes
[2026-01-10 10:35:01] 2026-01-10 09:33:55,623 | INFO     | will attempt to kill all subprocesses of pid=568706
[2026-01-10 10:35:01] 2026-01-10 09:33:55,665 | INFO     | process IDs to be killed: [568706] (in reverse order)
[2026-01-10 10:35:01] 2026-01-10 09:33:55,689 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 10:35:01] 2026-01-10 09:33:55,689 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 10:35:01] 2026-01-10 09:33:55,690 | INFO     | did not find any defunct processes belonging to 568706
[2026-01-10 10:35:01] 2026-01-10 09:33:55,691 | INFO     | did not find any defunct processes belonging to 568706
[2026-01-10 10:35:01] 2026-01-10 09:33:55,691 | INFO     | ready for new job
[2026-01-10 10:35:01] 2026-01-10 09:33:55,691 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 10:35:01] 2026-01-10 09:33:55,692 | INFO     | ***************************************
[2026-01-10 10:35:01] 2026-01-10 09:33:55,692 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 10:35:01] 2026-01-10 09:33:55,692 | INFO     | ***************************************
[2026-01-10 10:35:01] 2026-01-10 09:33:55,692 | INFO     | 
[2026-01-10 10:35:01] 2026-01-10 09:33:55,693 | INFO     | architecture information:
[2026-01-10 10:35:01] 2026-01-10 09:33:55,693 | INFO     | executing command: cat /etc/os-release
[2026-01-10 10:35:01] 2026-01-10 09:33:55,701 | INFO     | cat /etc/os-release:
[2026-01-10 10:35:01] NAME="CentOS Linux"
[2026-01-10 10:35:01] VERSION="7 (Core)"
[2026-01-10 10:35:01] ID="centos"
[2026-01-10 10:35:01] ID_LIKE="rhel fedora"
[2026-01-10 10:35:01] VERSION_ID="7"
[2026-01-10 10:35:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 10:35:01] ANSI_COLOR="0;31"
[2026-01-10 10:35:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 10:35:01] HOME_URL="https://www.centos.org/"
[2026-01-10 10:35:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 10:35:01] 
[2026-01-10 10:35:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 10:35:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 10:35:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 10:35:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 10:35:01] 
[2026-01-10 10:35:01] 2026-01-10 09:33:55,701 | INFO     | ***************************************
[2026-01-10 10:35:01] 2026-01-10 09:33:56,204 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-10 10:35:01] 2026-01-10 09:33:56,217 | INFO     | sufficient remaining disk space (243029508096 B)
[2026-01-10 10:35:01] 2026-01-10 09:33:56,217 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 10:35:01] 2026-01-10 09:33:56,217 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 10:35:01] 2026-01-10 09:33:56,217 | INFO     | update_server=False
[2026-01-10 10:35:01] 2026-01-10 09:33:56,217 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 10:35:01] 2026-01-10 09:33:56,218 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 10:35:01] 2026-01-10 09:33:56,403 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 10:35:01] 2026-01-10 09:33:56,545 | INFO     | all payload control threads have been joined
[2026-01-10 10:35:01] 2026-01-10 09:33:56,651 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 10:35:01] 2026-01-10 09:33:56,651 | INFO     | aborting loop
[2026-01-10 10:35:01] 2026-01-10 09:33:56,962 | INFO     | all data control threads have been joined
[2026-01-10 10:35:01] 2026-01-10 09:33:57,014 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 10:35:01] 2026-01-10 09:33:57,223 | INFO     | [job] retrieve thread has finished
[2026-01-10 10:35:01] 2026-01-10 09:33:57,223 | INFO     | [job] queue monitor thread has finished
[2026-01-10 10:35:01] 2026-01-10 09:33:57,245 | INFO     | [job] validate thread has finished
[2026-01-10 10:35:01] 2026-01-10 09:33:57,331 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 10:35:01] 2026-01-10 09:33:57,551 | INFO     | [payload] control thread has finished
[2026-01-10 10:35:01] 2026-01-10 09:33:57,576 | INFO     | all job control threads have been joined
[2026-01-10 10:35:01] 2026-01-10 09:33:57,657 | INFO     | [job] job monitor thread has finished
[2026-01-10 10:35:01] 2026-01-10 09:33:57,726 | INFO     | [payload] validate_post thread has finished
[2026-01-10 10:35:01] 2026-01-10 09:33:57,968 | INFO     | [data] control thread has finished
[2026-01-10 10:35:01] 2026-01-10 09:33:58,105 | INFO     | [data] copytool_in thread has finished
[2026-01-10 10:35:01] 2026-01-10 09:33:58,582 | INFO     | [job] control thread has finished
[2026-01-10 10:35:01] 2026-01-10 09:33:58,688 | INFO     | [payload] failed_post thread has finished
[2026-01-10 10:35:01] 2026-01-10 09:33:58,697 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 10:35:01] 2026-01-10 09:33:58,725 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 10:35:01] 2026-01-10 09:33:59,020 | INFO     | [data] copytool_out thread has finished
[2026-01-10 10:35:01] 2026-01-10 09:34:00,410 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 10:35:01] 2026-01-10 09:34:06,608 | INFO     | job.realtimelogging is not enabled
[2026-01-10 10:35:01] 2026-01-10 09:34:07,614 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 10:35:01] 2026-01-10 09:34:27,204 | INFO     | PID=562253 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 10:35:01] 2026-01-10 09:34:27,204 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 10:35:01] 2026-01-10 09:34:27,204 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 10:35:01] 2026-01-10 09:34:27,204 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 10:35:01] 2026-01-10 09:34:45,567 [wrapper] supervise_pilot (15 min periods counter: 9)
[2026-01-10 10:35:01] 2026-01-10 09:34:54,985 | INFO     | [monitor] cgroup control has ended
[2026-01-10 10:35:01] 2026-01-10 09:34:56,804 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140243100321600)>', '<ExcThread(monitor, started 140242476586752)>']
[2026-01-10 10:35:01] 2026-01-10 09:34:57,358 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 10:35:01] 2026-01-10 09:34:57,359 | INFO     | [monitor] control thread has ended
[2026-01-10 10:35:01] 2026-01-10 09:35:01,829 | INFO     | all workflow threads have been joined
[2026-01-10 10:35:01] 2026-01-10 09:35:01,829 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 10:35:01] 2026-01-10 09:35:01,830 | INFO     | traces error code: 0
[2026-01-10 10:35:01] 2026-01-10 09:35:01,830 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 10:35:01] 2026-01-10 09:35:01,879 [wrapper] ==== pilot stdout END ====
[2026-01-10 10:35:01] 2026-01-10 09:35:01,882 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 10:35:01] 2026-01-10 09:35:01,884 [wrapper] pilotpid: 562253
[2026-01-10 10:35:01] 2026-01-10 09:35:01,886 [wrapper] Pilot exit status: 0
[2026-01-10 10:35:01] 2026-01-10 09:35:01,893 [wrapper] pandaids: 6963402573
[2026-01-10 10:35:01] 2026-01-10 09:35:01,909 [wrapper] cleanup supervisor_pilot  586459 562254
[2026-01-10 10:35:01] 2026-01-10 09:35:01,911 [wrapper] Test setup, not cleaning
[2026-01-10 10:35:01] 2026-01-10 09:35:01,914 [wrapper] apfmon messages muted
[2026-01-10 10:35:01] 2026-01-10 09:35:01,916 [wrapper] ==== wrapper stdout END ====
[2026-01-10 10:35:01] 2026-01-10 09:35:01,918 [wrapper] ==== wrapper stderr END ====
[2026-01-10 10:35:01]  *** Error codes and diagnostics ***
[2026-01-10 10:35:01]     "exeErrorCode": 0,
[2026-01-10 10:35:01]     "exeErrorDiag": "",
[2026-01-10 10:35:01]     "pilotErrorCode": 0,
[2026-01-10 10:35:01]     "pilotErrorDiag": "",
[2026-01-10 10:35:01]  *** Listing of results directory ***
[2026-01-10 10:35:01] total 443180
[2026-01-10 10:35:01] -rw-r--r-- 1 boinc boinc    579449 Jan  9 05:21 pilot3.tar.gz
[2026-01-10 10:35:01] -rwx------ 1 boinc boinc     36322 Jan  9 05:23 runpilot2-wrapper.sh
[2026-01-10 10:35:01] -rw-r--r-- 1 boinc boinc      5112 Jan  9 05:24 queuedata.json
[2026-01-10 10:35:01] -rw-r--r-- 1 boinc boinc       100 Jan 10 08:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 10:35:01] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 08:34 run_atlas
[2026-01-10 10:35:01] -rw-r--r-- 1 boinc boinc       105 Jan 10 08:34 job.xml
[2026-01-10 10:35:01] -rw-r--r-- 2 boinc boinc 226176312 Jan 10 08:34 EVNT.47898824._000142.pool.root.1
[2026-01-10 10:35:01] -rw-r--r-- 2 boinc boinc    592398 Jan 10 08:34 input.tar.gz
[2026-01-10 10:35:01] -rw-r--r-- 2 boinc boinc     15847 Jan 10 08:34 start_atlas.sh
[2026-01-10 10:35:01] drwxrwx--x 2 boinc boinc      4096 Jan 10 08:34 shared
[2026-01-10 10:35:01] -rw-r--r-- 1 boinc boinc         0 Jan 10 08:34 boinc_setup_complete
[2026-01-10 10:35:01] -rw-r--r-- 1 boinc boinc      6439 Jan 10 08:34 init_data.xml
[2026-01-10 10:35:01] -rw-r--r-- 1 boinc boinc         0 Jan 10 08:34 boinc_lockfile
[2026-01-10 10:35:01] -rw-r--r-- 1 boinc boinc      2517 Jan 10 08:34 pandaJob.out
[2026-01-10 10:35:01] -rw------- 1 boinc boinc    989374 Jan 10 08:34 agis_schedconf.cvmfs.json
[2026-01-10 10:35:01] -rw------- 1 boinc boinc   1516240 Jan 10 08:34 agis_ddmendpoints.agis.ALL.json
[2026-01-10 10:35:01] drwx------ 5 boinc boinc      4096 Jan 10 08:34 pilot3
[2026-01-10 10:35:01] -rw------- 1 boinc boinc 221120441 Jan 10 10:33 HITS.47898826._039547.pool.root.1
[2026-01-10 10:35:01] -rw-r--r-- 1 boinc boinc       529 Jan 10 10:33 boinc_task_state.xml
[2026-01-10 10:35:01] -rw------- 1 boinc boinc      1019 Jan 10 10:33 memory_monitor_summary.json
[2026-01-10 10:35:01] -rw------- 1 boinc boinc    275682 Jan 10 10:33 log.47898826._039547.job.log.tgz.1
[2026-01-10 10:35:01] -rw------- 1 boinc boinc      7756 Jan 10 10:33 heartbeat.json
[2026-01-10 10:35:01] -rw------- 1 boinc boinc        95 Jan 10 10:34 pilot_heartbeat.json
[2026-01-10 10:35:01] -rw-r--r-- 1 boinc boinc      8192 Jan 10 10:34 boinc_mmap_file
[2026-01-10 10:35:01] -rw-r--r-- 1 boinc boinc        27 Jan 10 10:34 wrapper_checkpoint.txt
[2026-01-10 10:35:01] -rw------- 1 boinc boinc      4823 Jan 10 10:35 pilotlog.txt
[2026-01-10 10:35:01] -rw------- 1 boinc boinc   1026893 Jan 10 10:35 log.47898826._039547.job.log.1
[2026-01-10 10:35:01] -rw------- 1 boinc boinc       357 Jan 10 10:35 output.list
[2026-01-10 10:35:01] -rw-r--r-- 1 boinc boinc       620 Jan 10 10:35 runtime_log
[2026-01-10 10:35:01] -rw------- 1 boinc boinc   1320960 Jan 10 10:35 result.tar.gz
[2026-01-10 10:35:01] -rw-r--r-- 1 boinc boinc      8902 Jan 10 10:35 runtime_log.err
[2026-01-10 10:35:01] -rw------- 1 boinc boinc       660 Jan 10 10:35 WJTMDmHDJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmh2gKDm5IRlPo.diag
[2026-01-10 10:35:01] -rw-r--r-- 1 boinc boinc     21294 Jan 10 10:35 stderr.txt
[2026-01-10 10:35:01] HITS file was successfully produced:
[2026-01-10 10:35:01] -rw------- 1 boinc boinc 221120441 Jan 10 10:33 shared/HITS.pool.root.1
[2026-01-10 10:35:01]  *** Contents of shared directory: ***
[2026-01-10 10:35:01] total 438712
[2026-01-10 10:35:01] -rw-r--r-- 2 boinc boinc 226176312 Jan 10 08:34 ATLAS.root_0
[2026-01-10 10:35:01] -rw-r--r-- 2 boinc boinc    592398 Jan 10 08:34 input.tar.gz
[2026-01-10 10:35:01] -rw-r--r-- 2 boinc boinc     15847 Jan 10 08:34 start_atlas.sh
[2026-01-10 10:35:01] -rw------- 1 boinc boinc 221120441 Jan 10 10:33 HITS.pool.root.1
[2026-01-10 10:35:01] -rw------- 1 boinc boinc   1320960 Jan 10 10:35 result.tar.gz
10:35:03 (558533): run_atlas exited; CPU time 20812.096566
10:35:03 (558533): called boinc_finish(0)

</stderr_txt>
]]>

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