Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:25:34 (4098720): wrapper (7.7.26015): starting
06:25:34 (4098720): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 06:25:34] Arguments: --nthreads 8
[2026-01-09 06:25:34] Threads: 8
[2026-01-09 06:25:34] Checking for CVMFS
[2026-01-09 06:25:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 06:25:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 06:25:35] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 06:25:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 06:25:37] 2.13.3.0 11900 93348 424412 154942 2 477 32578741 32935936 23931 16776704 0 394958856 99.479 506793487 32813 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 06:25:37] CVMFS is ok
[2026-01-09 06:25:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 06:25:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 06:25:37] Further information can be found at the LHC@home message board.
[2026-01-09 06:25:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 06:25:37] Checking for apptainer binary...
[2026-01-09 06:25:37] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 06:25:37] Running /usr/bin/apptainer --version
[2026-01-09 06:25:37] apptainer version 1.4.5-2.el9
[2026-01-09 06:25:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 06:25:37] c6-12-27-1.aglt2.org
[2026-01-09 06:25:37] apptainer works
[2026-01-09 06:25:37] Set ATHENA_PROC_NUMBER=8
[2026-01-09 06:25:37] Set ATHENA_CORE_NUMBER=8
[2026-01-09 06:25:37] Starting ATLAS job with PandaID=6963373992
[2026-01-09 06:25:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 14:37:43]  *** The last 200 lines of the pilot log: ***
[2026-01-09 14:37:43] 2026-01-09 19:37:00,923 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 14:37:43] 2026-01-09 19:37:01,586 | INFO     | time since job start (29427s) is within the limit (349056.0s)
[2026-01-09 14:37:43] 2026-01-09 19:37:03,441 | INFO     | monitor loop #1780: job 0:6963373992 is in state 'finished'
[2026-01-09 14:37:43] 2026-01-09 19:37:03,442 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 14:37:43] 2026-01-09 19:37:03,595 | INFO     | time since job start (29429s) is within the limit (349056.0s)
[2026-01-09 14:37:43] 2026-01-09 19:37:05,601 | INFO     | time since job start (29431s) is within the limit (349056.0s)
[2026-01-09 14:37:43] 2026-01-09 19:37:05,946 | INFO     | monitor loop #1781: job 0:6963373992 is in state 'finished'
[2026-01-09 14:37:43] 2026-01-09 19:37:05,946 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 14:37:43] 2026-01-09 19:37:07,609 | INFO     | time since job start (29433s) is within the limit (349056.0s)
[2026-01-09 14:37:43] 2026-01-09 19:37:08,092 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 14:37:43] 2026-01-09 19:37:08,114 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2695.4489687499995
[2026-01-09 14:37:43] 2026-01-09 19:37:08,162 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963373992/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 14:37:43] 2026-01-09 19:37:08,171 | INFO     | extracted standard info from prmon json
[2026-01-09 14:37:43] 2026-01-09 19:37:08,171 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 14:37:43] 2026-01-09 19:37:08,171 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 14:37:43] 2026-01-09 19:37:08,175 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 14:37:43] 2026-01-09 19:37:08,176 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 14:37:43] 2026-01-09 19:37:08,212 | INFO     | fitting pss+swap vs Time
[2026-01-09 14:37:43] 2026-01-09 19:37:08,230 | INFO     | sum of square deviations: 34292552529.991703
[2026-01-09 14:37:43] 2026-01-09 19:37:08,256 | INFO     | sum of deviations: 47098155851.20412
[2026-01-09 14:37:43] 2026-01-09 19:37:08,256 | INFO     | mean x: 1767972724.1708333
[2026-01-09 14:37:43] 2026-01-09 19:37:08,256 | INFO     | mean y: 2513331.314583333
[2026-01-09 14:37:43] 2026-01-09 19:37:08,256 | INFO     | intersect: -2425659807.178119
[2026-01-09 14:37:43] 2026-01-09 19:37:08,257 | INFO     | chi2: 3.5789403726602522
[2026-01-09 14:37:43] 2026-01-09 19:37:08,258 | INFO     | sum of square deviations: 33232099370.071583
[2026-01-09 14:37:43] 2026-01-09 19:37:08,303 | INFO     | sum of deviations: 76186706953.73898
[2026-01-09 14:37:43] 2026-01-09 19:37:08,303 | INFO     | mean x: 1767972571.6757894
[2026-01-09 14:37:43] 2026-01-09 19:37:08,303 | INFO     | mean y: 2517477.829473684
[2026-01-09 14:37:43] 2026-01-09 19:37:08,304 | INFO     | intersect: -4050672382.989768
[2026-01-09 14:37:43] 2026-01-09 19:37:08,304 | INFO     | chi2: 2.901936929310658
[2026-01-09 14:37:43] 2026-01-09 19:37:08,304 | INFO     | current chi2=2.901936929310658 (change=18.91630965749711 %)
[2026-01-09 14:37:43] 2026-01-09 19:37:08,305 | INFO     | right removable region: 474
[2026-01-09 14:37:43] 2026-01-09 19:37:08,305 | INFO     | sum of square deviations: 33231932107.71796
[2026-01-09 14:37:43] 2026-01-09 19:37:08,351 | INFO     | sum of deviations: -71634979774.30316
[2026-01-09 14:37:43] 2026-01-09 19:37:08,351 | INFO     | mean x: 1767972876.6778948
[2026-01-09 14:37:43] 2026-01-09 19:37:08,351 | INFO     | mean y: 2530365.0568421055
[2026-01-09 14:37:43] 2026-01-09 19:37:08,351 | INFO     | intersect: 3813584770.555101
[2026-01-09 14:37:43] 2026-01-09 19:37:08,352 | INFO     | chi2: 1.1031112714948614
[2026-01-09 14:37:43] 2026-01-09 19:37:08,352 | INFO     | current chi2=1.1031112714948614 (change=69.17771304820843 %)
[2026-01-09 14:37:43] 2026-01-09 19:37:08,352 | INFO     | sum of square deviations: 32193521144.342186
[2026-01-09 14:37:43] 2026-01-09 19:37:08,380 | INFO     | sum of deviations: -103665534477.63617
[2026-01-09 14:37:43] 2026-01-09 19:37:08,381 | INFO     | mean x: 1767973029.1765957
[2026-01-09 14:37:43] 2026-01-09 19:37:08,399 | INFO     | mean y: 2535061.814893617
[2026-01-09 14:37:43] 2026-01-09 19:37:08,399 | INFO     | intersect: 5695539818.576246
[2026-01-09 14:37:43] 2026-01-09 19:37:08,400 | INFO     | chi2: 0.9179478569877171
[2026-01-09 14:37:43] 2026-01-09 19:37:08,400 | INFO     | current chi2=0.9179478569877171 (change=16.785560921358684 %)
[2026-01-09 14:37:43] 2026-01-09 19:37:08,400 | INFO     | left removable region: 20
[2026-01-09 14:37:43] 2026-01-09 19:37:08,401 | INFO     | sum of square deviations: 29016286972.328075
[2026-01-09 14:37:43] 2026-01-09 19:37:08,422 | INFO     | sum of deviations: -87084333061.45598
[2026-01-09 14:37:43] 2026-01-09 19:37:08,422 | INFO     | mean x: 1767973151.19163
[2026-01-09 14:37:43] 2026-01-09 19:37:08,422 | INFO     | mean y: 2541615.1431718064
[2026-01-09 14:37:43] 2026-01-09 19:37:08,422 | INFO     | intersect: 5308622399.6664715
[2026-01-09 14:37:43] 2026-01-09 19:37:08,441 | INFO     | chi2: 0.16805499006421173
[2026-01-09 14:37:43] 2026-01-09 19:37:08,442 | INFO     | current memory leak: -3.00 B/s (using 454 data points, chi2=0.17)
[2026-01-09 14:37:43] 2026-01-09 19:37:08,442 | INFO     | could have reported an average CPU frequency of 2692 MHz (20 samples)
[2026-01-09 14:37:43] 2026-01-09 19:37:08,443 | INFO     | ..............................
[2026-01-09 14:37:43] 2026-01-09 19:37:08,443 | INFO     | . Timing measurements:
[2026-01-09 14:37:43] 2026-01-09 19:37:08,443 | INFO     | . get job = 0 s
[2026-01-09 14:37:43] 2026-01-09 19:37:08,443 | INFO     | . initial setup = 4 s
[2026-01-09 14:37:43] 2026-01-09 19:37:08,443 | INFO     | . payload setup = 32 s
[2026-01-09 14:37:43] 2026-01-09 19:37:08,443 | INFO     | . stage-in = 0 s
[2026-01-09 14:37:43] 2026-01-09 19:37:08,443 | INFO     | . payload execution = 29293 s
[2026-01-09 14:37:43] 2026-01-09 19:37:08,443 | INFO     | . stage-out = 4 s
[2026-01-09 14:37:43] 2026-01-09 19:37:08,443 | INFO     | . log creation = 0 s
[2026-01-09 14:37:43] 2026-01-09 19:37:08,443 | INFO     | ..............................
[2026-01-09 14:37:43] 2026-01-09 19:37:08,695 | INFO     | 
[2026-01-09 14:37:43] 2026-01-09 19:37:08,695 | INFO     | job summary report
[2026-01-09 14:37:43] 2026-01-09 19:37:08,695 | INFO     | --------------------------------------------------
[2026-01-09 14:37:43] 2026-01-09 19:37:08,696 | INFO     | PanDA job id: 6963373992
[2026-01-09 14:37:43] 2026-01-09 19:37:08,696 | INFO     | task id: 47898826
[2026-01-09 14:37:43] 2026-01-09 19:37:08,696 | INFO     | errors: (none)
[2026-01-09 14:37:43] 2026-01-09 19:37:08,696 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 14:37:43] 2026-01-09 19:37:08,696 | INFO     | pilot state: finished 
[2026-01-09 14:37:43] 2026-01-09 19:37:08,696 | INFO     | transexitcode: 0
[2026-01-09 14:37:43] 2026-01-09 19:37:08,696 | INFO     | exeerrorcode: 0
[2026-01-09 14:37:43] 2026-01-09 19:37:08,696 | INFO     | exeerrordiag: 
[2026-01-09 14:37:43] 2026-01-09 19:37:08,696 | INFO     | exitcode: 0
[2026-01-09 14:37:43] 2026-01-09 19:37:08,696 | INFO     | exitmsg: OK
[2026-01-09 14:37:43] 2026-01-09 19:37:08,696 | INFO     | cpuconsumptiontime: 60436 s
[2026-01-09 14:37:43] 2026-01-09 19:37:08,696 | INFO     | nevents: 400
[2026-01-09 14:37:43] 2026-01-09 19:37:08,697 | INFO     | neventsw: 0
[2026-01-09 14:37:43] 2026-01-09 19:37:08,697 | INFO     | pid: 4129454
[2026-01-09 14:37:43] 2026-01-09 19:37:08,697 | INFO     | pgrp: 4129454
[2026-01-09 14:37:43] 2026-01-09 19:37:08,697 | INFO     | corecount: 8
[2026-01-09 14:37:43] 2026-01-09 19:37:08,697 | INFO     | event service: False
[2026-01-09 14:37:43] 2026-01-09 19:37:08,697 | INFO     | sizes: {0: 2283748, 1: 2283947, 12: 2283947, 24: 2283975, 28: 2284265, 35: 2284293, 29330: 2322154, 29331: 2322153, 29337: 2331207, 29339: 2331263, 29373: 2331457}
[2026-01-09 14:37:43] 2026-01-09 19:37:08,697 | INFO     | --------------------------------------------------
[2026-01-09 14:37:43] 2026-01-09 19:37:08,697 | INFO     | 
[2026-01-09 14:37:43] 2026-01-09 19:37:08,697 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-09 14:37:43] 2026-01-09 19:37:08,772 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 14:37:43] 2026-01-09 19:37:08,772 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 14:37:43] 2026-01-09 19:37:08,772 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 14:37:43] 2026-01-09 19:37:08,772 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 14:37:43] 2026-01-09 19:37:08,772 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 14:37:43] 2026-01-09 19:37:08,772 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 14:37:43] 2026-01-09 19:37:08,772 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 14:37:43] 2026-01-09 19:37:08,772 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 14:37:43] 2026-01-09 19:37:08,773 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 14:37:43] 2026-01-09 19:37:08,773 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 14:37:43] 2026-01-09 19:37:08,773 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 14:37:43] 2026-01-09 19:37:08,773 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 14:37:43] 2026-01-09 19:37:08,773 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 14:37:43] 2026-01-09 19:37:08,773 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 14:37:43] 2026-01-09 19:37:08,773 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 14:37:43] 2026-01-09 19:37:08,773 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 14:37:43] 2026-01-09 19:37:08,773 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 14:37:43] 2026-01-09 19:37:08,773 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 14:37:43] 2026-01-09 19:37:08,773 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 14:37:43] 2026-01-09 19:37:08,774 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 14:37:43] 2026-01-09 19:37:08,774 | INFO     | job 6963373992 has completed (purged errors)
[2026-01-09 14:37:43] 2026-01-09 19:37:08,774 | INFO     | overall cleanup function is called
[2026-01-09 14:37:43] 2026-01-09 19:37:09,787 | INFO     | --- collectZombieJob: --- 10, [4129454]
[2026-01-09 14:37:43] 2026-01-09 19:37:09,787 | INFO     | zombie collector waiting for pid 4129454
[2026-01-09 14:37:43] 2026-01-09 19:37:09,787 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 14:37:43] 2026-01-09 19:37:09,788 | INFO     | collected zombie processes
[2026-01-09 14:37:43] 2026-01-09 19:37:09,788 | INFO     | will attempt to kill all subprocesses of pid=4129454
[2026-01-09 14:37:43] 2026-01-09 19:37:11,237 | INFO     | process IDs to be killed: [4129454] (in reverse order)
[2026-01-09 14:37:43] 2026-01-09 19:37:12,034 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 14:37:43] 2026-01-09 19:37:12,035 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 14:37:43] 2026-01-09 19:37:12,135 | INFO     | did not find any defunct processes belonging to 4129454
[2026-01-09 14:37:43] 2026-01-09 19:37:12,230 | INFO     | did not find any defunct processes belonging to 4129454
[2026-01-09 14:37:43] 2026-01-09 19:37:12,231 | INFO     | ready for new job
[2026-01-09 14:37:43] 2026-01-09 19:37:12,231 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 14:37:43] 2026-01-09 19:37:12,279 | INFO     | ***************************************
[2026-01-09 14:37:43] 2026-01-09 19:37:12,280 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 14:37:43] 2026-01-09 19:37:12,280 | INFO     | ***************************************
[2026-01-09 14:37:43] 2026-01-09 19:37:12,280 | INFO     | 
[2026-01-09 14:37:43] 2026-01-09 19:37:12,308 | INFO     | architecture information:
[2026-01-09 14:37:43] 2026-01-09 19:37:12,331 | INFO     | executing command: cat /etc/os-release
[2026-01-09 14:37:43] 2026-01-09 19:37:12,397 | INFO     | cat /etc/os-release:
[2026-01-09 14:37:43] NAME="CentOS Linux"
[2026-01-09 14:37:43] VERSION="7 (Core)"
[2026-01-09 14:37:43] ID="centos"
[2026-01-09 14:37:43] ID_LIKE="rhel fedora"
[2026-01-09 14:37:43] VERSION_ID="7"
[2026-01-09 14:37:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 14:37:43] ANSI_COLOR="0;31"
[2026-01-09 14:37:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 14:37:43] HOME_URL="https://www.centos.org/"
[2026-01-09 14:37:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 14:37:43] 
[2026-01-09 14:37:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 14:37:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 14:37:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 14:37:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 14:37:43] 
[2026-01-09 14:37:43] 2026-01-09 19:37:12,398 | INFO     | ***************************************
[2026-01-09 14:37:43] 2026-01-09 19:37:12,903 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-09 14:37:43] 2026-01-09 19:37:12,972 | INFO     | sufficient remaining disk space (93397712896 B)
[2026-01-09 14:37:43] 2026-01-09 19:37:12,973 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 14:37:43] 2026-01-09 19:37:12,973 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 14:37:43] 2026-01-09 19:37:12,973 | INFO     | update_server=False
[2026-01-09 14:37:43] 2026-01-09 19:37:12,973 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 14:37:43] 2026-01-09 19:37:12,973 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 14:37:43] 2026-01-09 19:37:12,973 | INFO     | aborting loop
[2026-01-09 14:37:43] 2026-01-09 19:37:13,038 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 14:37:43] 2026-01-09 19:37:13,072 | INFO     | all job control threads have been joined
[2026-01-09 14:37:43] 2026-01-09 19:37:13,274 | INFO     | all data control threads have been joined
[2026-01-09 14:37:43] 2026-01-09 19:37:13,284 | INFO     | all payload control threads have been joined
[2026-01-09 14:37:43] 2026-01-09 19:37:13,657 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 14:37:43] 2026-01-09 19:37:13,723 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 14:37:43] 2026-01-09 19:37:13,979 | INFO     | [job] retrieve thread has finished
[2026-01-09 14:37:43] 2026-01-09 19:37:13,980 | INFO     | [job] job monitor thread has finished
[2026-01-09 14:37:43] 2026-01-09 19:37:14,078 | INFO     | [job] control thread has finished
[2026-01-09 14:37:43] 2026-01-09 19:37:14,268 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 14:37:43] 2026-01-09 19:37:14,280 | INFO     | [data] control thread has finished
[2026-01-09 14:37:43] 2026-01-09 19:37:14,290 | INFO     | [payload] control thread has finished
[2026-01-09 14:37:43] 2026-01-09 19:37:14,458 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 14:37:43] 2026-01-09 19:37:14,459 | INFO     | [data] copytool_in thread has finished
[2026-01-09 14:37:43] 2026-01-09 19:37:14,459 | INFO     | [job] validate thread has finished
[2026-01-09 14:37:43] 2026-01-09 19:37:14,729 | INFO     | [job] queue monitor thread has finished
[2026-01-09 14:37:43] 2026-01-09 19:37:15,085 | INFO     | [payload] failed_post thread has finished
[2026-01-09 14:37:43] 2026-01-09 19:37:15,102 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 14:37:43] 2026-01-09 19:37:15,103 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 14:37:43] 2026-01-09 19:37:15,435 | INFO     | [payload] validate_post thread has finished
[2026-01-09 14:37:43] 2026-01-09 19:37:15,664 | INFO     | [data] copytool_out thread has finished
[2026-01-09 14:37:43] 2026-01-09 19:37:17,052 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 14:37:43] 2026-01-09 19:37:25,779 | INFO     | [monitor] cgroup control has ended
[2026-01-09 14:37:43] 2026-01-09 19:37:27,300 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140361046083392)>', '<ExcThread(monitor, started 140360688834304)>']
[2026-01-09 14:37:43] 2026-01-09 19:37:32,326 | INFO     | all workflow threads have been joined
[2026-01-09 14:37:43] 2026-01-09 19:37:32,326 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 14:37:43] 2026-01-09 19:37:32,327 | INFO     | traces error code: 0
[2026-01-09 14:37:43] 2026-01-09 19:37:32,327 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 14:37:43] 2026-01-09 19:37:41,779 | INFO     | PID=4111098 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 14:37:43] 2026-01-09 19:37:41,785 | INFO     | .. there are 23 such processes running
[2026-01-09 14:37:43] 2026-01-09 19:37:41,786 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 14:37:43] 2026-01-09 19:37:41,786 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 14:37:43] 2026-01-09 19:37:41,786 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 14:37:43] 2026-01-09 19:37:41,786 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 14:37:43] 2026-01-09 19:37:41,786 | INFO     | [monitor] control thread has ended
[2026-01-09 14:37:43] 2026-01-09 19:37:42,494 [wrapper] ==== pilot stdout END ====
[2026-01-09 14:37:43] 2026-01-09 19:37:42,510 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 14:37:43] 2026-01-09 19:37:42,546 [wrapper] pilotpid: 4111098
[2026-01-09 14:37:43] 2026-01-09 19:37:42,573 [wrapper] Pilot exit status: 0
[2026-01-09 14:37:43] 2026-01-09 19:37:42,779 [wrapper] pandaids: 6963373992
[2026-01-09 14:37:43] 2026-01-09 19:37:43,124 [wrapper] cleanup supervisor_pilot 1403783 4111099
[2026-01-09 14:37:43] 2026-01-09 19:37:43,136 [wrapper] Test setup, not cleaning
[2026-01-09 14:37:43] 2026-01-09 19:37:43,163 [wrapper] apfmon messages muted
[2026-01-09 14:37:43] 2026-01-09 19:37:43,179 [wrapper] ==== wrapper stdout END ====
[2026-01-09 14:37:43] 2026-01-09 19:37:43,193 [wrapper] ==== wrapper stderr END ====
[2026-01-09 14:37:43]  *** Error codes and diagnostics ***
[2026-01-09 14:37:43]     "exeErrorCode": 0,
[2026-01-09 14:37:43]     "exeErrorDiag": "",
[2026-01-09 14:37:43]     "pilotErrorCode": 0,
[2026-01-09 14:37:43]     "pilotErrorDiag": "",
[2026-01-09 14:37:43]  *** Listing of results directory ***
[2026-01-09 14:37:43] total 448996
[2026-01-09 14:37:43] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-09 14:37:43] -rwx------. 1 boincer umatlas     36322 Jan  8 23:23 runpilot2-wrapper.sh
[2026-01-09 14:37:43] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 23:24 queuedata.json
[2026-01-09 14:37:43] -rw-r--r--. 1 boincer umatlas       100 Jan  9 06:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 14:37:43] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 06:25 run_atlas
[2026-01-09 14:37:43] -rw-r--r--. 1 boincer umatlas       105 Jan  9 06:25 job.xml
[2026-01-09 14:37:43] -rw-r--r--. 2 boincer umatlas 225301423 Jan  9 06:25 EVNT.47898824._000787.pool.root.1
[2026-01-09 14:37:43] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 06:25 start_atlas.sh
[2026-01-09 14:37:43] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 06:25 shared
[2026-01-09 14:37:43] -rw-r--r--. 2 boincer umatlas    592405 Jan  9 06:25 input.tar.gz
[2026-01-09 14:37:43] -rw-r--r--. 1 boincer umatlas         0 Jan  9 06:25 boinc_lockfile
[2026-01-09 14:37:43] -rw-r--r--. 1 boincer umatlas      2519 Jan  9 06:25 pandaJob.out
[2026-01-09 14:37:43] -rw-------. 1 boincer umatlas        57 Jan  9 06:25 setup.sh.local
[2026-01-09 14:37:43] -rw-------. 1 boincer umatlas    989377 Jan  9 06:26 agis_schedconf.cvmfs.json
[2026-01-09 14:37:43] drwx------. 5 boincer umatlas      4096 Jan  9 06:26 pilot3
[2026-01-09 14:37:43] -rw-------. 1 boincer umatlas 221895131 Jan  9 14:34 HITS.47898826._039538.pool.root.1
[2026-01-09 14:37:43] -rw-r--r--. 1 boincer umatlas       530 Jan  9 14:34 boinc_task_state.xml
[2026-01-09 14:37:43] -rw-r--r--. 1 boincer umatlas      6879 Jan  9 14:36 init_data.xml
[2026-01-09 14:37:43] -rw-------. 1 boincer umatlas      1042 Jan  9 14:36 memory_monitor_summary.json
[2026-01-09 14:37:43] -rw-------. 1 boincer umatlas   1516240 Jan  9 14:36 agis_ddmendpoints.agis.ALL.json
[2026-01-09 14:37:43] -rw-------. 1 boincer umatlas    659417 Jan  9 14:36 log.47898826._039538.job.log.tgz.1
[2026-01-09 14:37:43] -rw-------. 1 boincer umatlas      7829 Jan  9 14:37 heartbeat.json
[2026-01-09 14:37:43] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 14:37 boinc_mmap_file
[2026-01-09 14:37:43] -rw-r--r--. 1 boincer umatlas        28 Jan  9 14:37 wrapper_checkpoint.txt
[2026-01-09 14:37:43] -rw-------. 1 boincer umatlas        95 Jan  9 14:37 pilot_heartbeat.json
[2026-01-09 14:37:43] -rw-------. 1 boincer umatlas       823 Jan  9 14:37 pilotlog.txt
[2026-01-09 14:37:43] -rw-------. 1 boincer umatlas   3672339 Jan  9 14:37 log.47898826._039538.job.log.1
[2026-01-09 14:37:43] -rw-------. 1 boincer umatlas       357 Jan  9 14:37 output.list
[2026-01-09 14:37:43] -rw-r--r--. 1 boincer umatlas       620 Jan  9 14:37 runtime_log
[2026-01-09 14:37:43] -rw-------. 1 boincer umatlas   4352000 Jan  9 14:37 result.tar.gz
[2026-01-09 14:37:43] -rw-r--r--. 1 boincer umatlas      9353 Jan  9 14:37 runtime_log.err
[2026-01-09 14:37:43] -rw-------. 1 boincer umatlas       660 Jan  9 14:37 6PIMDmHDJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmb2gKDmXFGMwm.diag
[2026-01-09 14:37:43] -rw-r--r--. 1 boincer umatlas     21464 Jan  9 14:37 stderr.txt
[2026-01-09 14:37:43] HITS file was successfully produced:
[2026-01-09 14:37:43] -rw-------. 1 boincer umatlas 221895131 Jan  9 14:34 shared/HITS.pool.root.1
[2026-01-09 14:37:43]  *** Contents of shared directory: ***
[2026-01-09 14:37:43] total 441572
[2026-01-09 14:37:43] -rw-r--r--. 2 boincer umatlas 225301423 Jan  9 06:25 ATLAS.root_0
[2026-01-09 14:37:43] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 06:25 start_atlas.sh
[2026-01-09 14:37:43] -rw-r--r--. 2 boincer umatlas    592405 Jan  9 06:25 input.tar.gz
[2026-01-09 14:37:43] -rw-------. 1 boincer umatlas 221895131 Jan  9 14:34 HITS.pool.root.1
[2026-01-09 14:37:43] -rw-------. 1 boincer umatlas   4352000 Jan  9 14:37 result.tar.gz
14:37:45 (4098720): run_atlas exited; CPU time 61663.865577
14:37:45 (4098720): called boinc_finish(0)

</stderr_txt>
]]>

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