Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:09:10 (4854): wrapper (7.7.26015): starting
06:09:10 (4854): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 06:09:10] Arguments: --nthreads 8
[2026-01-09 06:09:10] Threads: 8
[2026-01-09 06:09:10] Checking for CVMFS
[2026-01-09 06:09:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 06:09:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 06:09:10] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 06:09:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 06:09:11] 2.11.2.0 2840 130916 82652 154941 1 56 12945019 20275200 1 130560 0 31810710 99.817 8392059 30783 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 06:09:11] CVMFS is ok
[2026-01-09 06:09:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 06:09:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 06:09:11] Further information can be found at the LHC@home message board.
[2026-01-09 06:09:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 06:09:11] Checking for apptainer binary...
[2026-01-09 06:09:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 06:09:11] Running /usr/bin/apptainer --version
[2026-01-09 06:09:11] apptainer version 1.3.2-1.el7
[2026-01-09 06:09:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 06:09:12] c-204-39.aglt2.org
[2026-01-09 06:09:12] apptainer works
[2026-01-09 06:09:12] Set ATHENA_PROC_NUMBER=8
[2026-01-09 06:09:12] Set ATHENA_CORE_NUMBER=8
[2026-01-09 06:09:12] Starting ATLAS job with PandaID=6963160849
[2026-01-09 06:09:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 09:08:52]  *** The last 200 lines of the pilot log: ***
[2026-01-09 09:08:52] 2026-01-09 14:08:08,028 | INFO     | mean x: 1767962308.0
[2026-01-09 09:08:52] 2026-01-09 14:08:08,029 | INFO     | mean y: 2468844.9657142856
[2026-01-09 09:08:52] 2026-01-09 14:08:08,029 | INFO     | intersect: -33521304891.32235
[2026-01-09 09:08:52] 2026-01-09 14:08:08,029 | INFO     | chi2: 1.443276290990597
[2026-01-09 09:08:52] 2026-01-09 14:08:08,029 | INFO     | sum of square deviations: 1523386702.5
[2026-01-09 09:08:52] 2026-01-09 14:08:08,030 | INFO     | sum of deviations: 30461969245.0
[2026-01-09 09:08:52] 2026-01-09 14:08:08,030 | INFO     | mean x: 1767962155.5
[2026-01-09 09:08:52] 2026-01-09 14:08:08,031 | INFO     | mean y: 2467689.1764705884
[2026-01-09 09:08:52] 2026-01-09 14:08:08,031 | INFO     | intersect: -35350085092.58507
[2026-01-09 09:08:52] 2026-01-09 14:08:08,031 | INFO     | chi2: 1.4439778055422656
[2026-01-09 09:08:52] 2026-01-09 14:08:08,031 | INFO     | current chi2=1.4439778055422656 (change=-0.048605700519557676 %)
[2026-01-09 09:08:52] 2026-01-09 14:08:08,031 | INFO     | right removable region: 169
[2026-01-09 09:08:52] 2026-01-09 14:08:08,032 | INFO     | sum of square deviations: 1523386702.5
[2026-01-09 09:08:52] 2026-01-09 14:08:08,033 | INFO     | sum of deviations: 5282470161.500001
[2026-01-09 09:08:52] 2026-01-09 14:08:08,033 | INFO     | mean x: 1767962460.5
[2026-01-09 09:08:52] 2026-01-09 14:08:08,033 | INFO     | mean y: 2497366.7
[2026-01-09 09:08:52] 2026-01-09 14:08:08,033 | INFO     | intersect: -6128059588.3508625
[2026-01-09 09:08:52] 2026-01-09 14:08:08,033 | INFO     | chi2: 0.019870989100597397
[2026-01-09 09:08:52] 2026-01-09 14:08:08,033 | INFO     | current chi2=0.019870989100597397 (change=98.62320269343863 %)
[2026-01-09 09:08:52] 2026-01-09 14:08:08,034 | INFO     | sum of square deviations: 1392881930.0
[2026-01-09 09:08:52] 2026-01-09 14:08:08,035 | INFO     | sum of deviations: 6185689140.0
[2026-01-09 09:08:52] 2026-01-09 14:08:08,035 | INFO     | mean x: 1767962613.0
[2026-01-09 09:08:52] 2026-01-09 14:08:08,035 | INFO     | mean y: 2496288.793939394
[2026-01-09 09:08:52] 2026-01-09 14:08:08,035 | INFO     | intersect: -7848899367.6635475
[2026-01-09 09:08:52] 2026-01-09 14:08:08,035 | INFO     | chi2: 0.0015229410530334193
[2026-01-09 09:08:52] 2026-01-09 14:08:08,035 | INFO     | current chi2=0.0015229410530334193 (change=92.33585683468755 %)
[2026-01-09 09:08:52] 2026-01-09 14:08:08,036 | INFO     | sum of square deviations: 1270051720.0
[2026-01-09 09:08:52] 2026-01-09 14:08:08,037 | INFO     | sum of deviations: 4904970014.499999
[2026-01-09 09:08:52] 2026-01-09 14:08:08,037 | INFO     | mean x: 1767962765.5
[2026-01-09 09:08:52] 2026-01-09 14:08:08,037 | INFO     | mean y: 2497874.36875
[2026-01-09 09:08:52] 2026-01-09 14:08:08,037 | INFO     | intersect: -6825416465.631509
[2026-01-09 09:08:52] 2026-01-09 14:08:08,037 | INFO     | chi2: 0.0006661892708905286
[2026-01-09 09:08:52] 2026-01-09 14:08:08,037 | INFO     | current chi2=0.0006661892708905286 (change=56.2563981341496 %)
[2026-01-09 09:08:52] 2026-01-09 14:08:08,038 | INFO     | sum of square deviations: 1154663510.0
[2026-01-09 09:08:52] 2026-01-09 14:08:08,038 | INFO     | sum of deviations: 4119227825.0
[2026-01-09 09:08:52] 2026-01-09 14:08:08,039 | INFO     | mean x: 1767962918.0
[2026-01-09 09:08:52] 2026-01-09 14:08:08,039 | INFO     | mean y: 2498913.0
[2026-01-09 09:08:52] 2026-01-09 14:08:08,039 | INFO     | intersect: -6304656359.789207
[2026-01-09 09:08:52] 2026-01-09 14:08:08,039 | INFO     | chi2: 0.0004879052911908317
[2026-01-09 09:08:52] 2026-01-09 14:08:08,039 | INFO     | current chi2=0.0004879052911908317 (change=26.761760882365422 %)
[2026-01-09 09:08:52] 2026-01-09 14:08:08,040 | INFO     | sum of square deviations: 1046484737.5
[2026-01-09 09:08:52] 2026-01-09 14:08:08,040 | INFO     | sum of deviations: 3509395849.5000005
[2026-01-09 09:08:52] 2026-01-09 14:08:08,041 | INFO     | mean x: 1767963070.5
[2026-01-09 09:08:52] 2026-01-09 14:08:08,041 | INFO     | mean y: 2499771.033333333
[2026-01-09 09:08:52] 2026-01-09 14:08:08,041 | INFO     | intersect: -5926380067.677144
[2026-01-09 09:08:52] 2026-01-09 14:08:08,041 | INFO     | chi2: 0.00039813837189628376
[2026-01-09 09:08:52] 2026-01-09 14:08:08,041 | INFO     | current chi2=0.00039813837189628376 (change=18.39843119459795 %)
[2026-01-09 09:08:52] 2026-01-09 14:08:08,041 | INFO     | left removable region: 50
[2026-01-09 09:08:52] 2026-01-09 14:08:08,042 | INFO     | sum of square deviations: 522502820.0
[2026-01-09 09:08:52] 2026-01-09 14:08:08,042 | INFO     | sum of deviations: 1334179678.0000002
[2026-01-09 09:08:52] 2026-01-09 14:08:08,042 | INFO     | mean x: 1767963650.0
[2026-01-09 09:08:52] 2026-01-09 14:08:08,043 | INFO     | mean y: 2503101.117647059
[2026-01-09 09:08:52] 2026-01-09 14:08:08,043 | INFO     | intersect: -4511886262.891345
[2026-01-09 09:08:52] 2026-01-09 14:08:08,043 | INFO     | chi2: 0.0001579076198175901
[2026-01-09 09:08:52] 2026-01-09 14:08:08,043 | INFO     | current memory leak: 2.55 B/s (using 119 data points, chi2=0.00)
[2026-01-09 09:08:52] 2026-01-09 14:08:08,043 | INFO     | could have reported an average CPU frequency of 2010 MHz (9 samples)
[2026-01-09 09:08:52] 2026-01-09 14:08:08,044 | INFO     | ..............................
[2026-01-09 09:08:52] 2026-01-09 14:08:08,044 | INFO     | . Timing measurements:
[2026-01-09 09:08:52] 2026-01-09 14:08:08,044 | INFO     | . get job = 0 s
[2026-01-09 09:08:52] 2026-01-09 14:08:08,044 | INFO     | . initial setup = 2 s
[2026-01-09 09:08:52] 2026-01-09 14:08:08,044 | INFO     | . payload setup = 8 s
[2026-01-09 09:08:52] 2026-01-09 14:08:08,044 | INFO     | . stage-in = 0 s
[2026-01-09 09:08:52] 2026-01-09 14:08:08,044 | INFO     | . payload execution = 10678 s
[2026-01-09 09:08:52] 2026-01-09 14:08:08,045 | INFO     | . stage-out = 0 s
[2026-01-09 09:08:52] 2026-01-09 14:08:08,045 | INFO     | . log creation = 0 s
[2026-01-09 09:08:52] 2026-01-09 14:08:08,045 | INFO     | ..............................
[2026-01-09 09:08:52] 2026-01-09 14:08:08,138 | INFO     | 
[2026-01-09 09:08:52] 2026-01-09 14:08:08,138 | INFO     | job summary report
[2026-01-09 09:08:52] 2026-01-09 14:08:08,138 | INFO     | --------------------------------------------------
[2026-01-09 09:08:52] 2026-01-09 14:08:08,139 | INFO     | PanDA job id: 6963160849
[2026-01-09 09:08:52] 2026-01-09 14:08:08,139 | INFO     | task id: 47898826
[2026-01-09 09:08:52] 2026-01-09 14:08:08,139 | INFO     | errors: (none)
[2026-01-09 09:08:52] 2026-01-09 14:08:08,139 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 09:08:52] 2026-01-09 14:08:08,139 | INFO     | pilot state: finished 
[2026-01-09 09:08:52] 2026-01-09 14:08:08,140 | INFO     | transexitcode: 0
[2026-01-09 09:08:52] 2026-01-09 14:08:08,140 | INFO     | exeerrorcode: 0
[2026-01-09 09:08:52] 2026-01-09 14:08:08,140 | INFO     | exeerrordiag: 
[2026-01-09 09:08:52] 2026-01-09 14:08:08,140 | INFO     | exitcode: 0
[2026-01-09 09:08:52] 2026-01-09 14:08:08,140 | INFO     | exitmsg: OK
[2026-01-09 09:08:52] 2026-01-09 14:08:08,140 | INFO     | cpuconsumptiontime: 80899 s
[2026-01-09 09:08:52] 2026-01-09 14:08:08,141 | INFO     | nevents: 400
[2026-01-09 09:08:52] 2026-01-09 14:08:08,141 | INFO     | neventsw: 0
[2026-01-09 09:08:52] 2026-01-09 14:08:08,141 | INFO     | pid: 14917
[2026-01-09 09:08:52] 2026-01-09 14:08:08,141 | INFO     | pgrp: 14917
[2026-01-09 09:08:52] 2026-01-09 14:08:08,141 | INFO     | corecount: 8
[2026-01-09 09:08:52] 2026-01-09 14:08:08,141 | INFO     | event service: False
[2026-01-09 09:08:52] 2026-01-09 14:08:08,142 | INFO     | sizes: {0: 2283800, 1: 2283999, 6: 2284261, 11: 2284289, 10690: 2313262, 10691: 2322260, 10693: 2322444, 10701: 2322702}
[2026-01-09 09:08:52] 2026-01-09 14:08:08,142 | INFO     | --------------------------------------------------
[2026-01-09 09:08:52] 2026-01-09 14:08:08,142 | INFO     | 
[2026-01-09 09:08:52] 2026-01-09 14:08:08,142 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 09:08:52] 2026-01-09 14:08:08,170 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 09:08:52] 2026-01-09 14:08:08,171 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 09:08:52] 2026-01-09 14:08:08,171 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 09:08:52] 2026-01-09 14:08:08,171 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 09:08:52] 2026-01-09 14:08:08,171 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 09:08:52] 2026-01-09 14:08:08,172 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 09:08:52] 2026-01-09 14:08:08,172 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 09:08:52] 2026-01-09 14:08:08,172 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 09:08:52] 2026-01-09 14:08:08,172 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 09:08:52] 2026-01-09 14:08:08,172 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 09:08:52] 2026-01-09 14:08:08,172 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 09:08:52] 2026-01-09 14:08:08,173 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 09:08:52] 2026-01-09 14:08:08,173 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 09:08:52] 2026-01-09 14:08:08,173 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 09:08:52] 2026-01-09 14:08:08,173 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 09:08:52] 2026-01-09 14:08:08,173 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 09:08:52] 2026-01-09 14:08:08,173 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 09:08:52] 2026-01-09 14:08:08,174 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 09:08:52] 2026-01-09 14:08:08,174 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 09:08:52] 2026-01-09 14:08:08,174 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 09:08:52] 2026-01-09 14:08:08,174 | INFO     | job 6963160849 has completed (purged errors)
[2026-01-09 09:08:52] 2026-01-09 14:08:08,175 | INFO     | overall cleanup function is called
[2026-01-09 09:08:52] 2026-01-09 14:08:09,183 | INFO     | --- collectZombieJob: --- 10, [14917]
[2026-01-09 09:08:52] 2026-01-09 14:08:09,183 | INFO     | zombie collector waiting for pid 14917
[2026-01-09 09:08:52] 2026-01-09 14:08:09,183 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 09:08:52] 2026-01-09 14:08:09,184 | INFO     | collected zombie processes
[2026-01-09 09:08:52] 2026-01-09 14:08:09,184 | INFO     | will attempt to kill all subprocesses of pid=14917
[2026-01-09 09:08:52] 2026-01-09 14:08:09,276 | INFO     | process IDs to be killed: [14917] (in reverse order)
[2026-01-09 09:08:52] 2026-01-09 14:08:09,332 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 09:08:52] 2026-01-09 14:08:09,332 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 09:08:52] 2026-01-09 14:08:09,337 | INFO     | did not find any defunct processes belonging to 14917
[2026-01-09 09:08:52] 2026-01-09 14:08:09,340 | INFO     | did not find any defunct processes belonging to 14917
[2026-01-09 09:08:52] 2026-01-09 14:08:09,340 | INFO     | ready for new job
[2026-01-09 09:08:52] 2026-01-09 14:08:09,340 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 09:08:52] 2026-01-09 14:08:09,342 | INFO     | ***************************************
[2026-01-09 09:08:52] 2026-01-09 14:08:09,343 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 09:08:52] 2026-01-09 14:08:09,343 | INFO     | ***************************************
[2026-01-09 09:08:52] 2026-01-09 14:08:09,343 | INFO     | 
[2026-01-09 09:08:52] 2026-01-09 14:08:09,343 | INFO     | architecture information:
[2026-01-09 09:08:52] 2026-01-09 14:08:09,344 | INFO     | executing command: cat /etc/os-release
[2026-01-09 09:08:52] 2026-01-09 14:08:09,363 | INFO     | cat /etc/os-release:
[2026-01-09 09:08:52] NAME="CentOS Linux"
[2026-01-09 09:08:52] VERSION="7 (Core)"
[2026-01-09 09:08:52] ID="centos"
[2026-01-09 09:08:52] ID_LIKE="rhel fedora"
[2026-01-09 09:08:52] VERSION_ID="7"
[2026-01-09 09:08:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 09:08:52] ANSI_COLOR="0;31"
[2026-01-09 09:08:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 09:08:52] HOME_URL="https://www.centos.org/"
[2026-01-09 09:08:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 09:08:52] 
[2026-01-09 09:08:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 09:08:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 09:08:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 09:08:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 09:08:52] 
[2026-01-09 09:08:52] 2026-01-09 14:08:09,363 | INFO     | ***************************************
[2026-01-09 09:08:52] 2026-01-09 14:08:09,866 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 09:08:52] 2026-01-09 14:08:09,885 | INFO     | sufficient remaining disk space (18506317824 B)
[2026-01-09 09:08:52] 2026-01-09 14:08:09,886 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 09:08:52] 2026-01-09 14:08:09,886 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 09:08:52] 2026-01-09 14:08:09,886 | INFO     | update_server=False
[2026-01-09 09:08:52] 2026-01-09 14:08:09,886 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 09:08:52] 2026-01-09 14:08:09,887 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 09:08:52] 2026-01-09 14:08:09,887 | INFO     | aborting loop
[2026-01-09 09:08:52] 2026-01-09 14:08:09,887 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 09:08:52] 2026-01-09 14:08:09,924 | INFO     | all job control threads have been joined
[2026-01-09 09:08:52] 2026-01-09 14:08:10,737 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 09:08:52] 2026-01-09 14:08:10,891 | INFO     | [job] queue monitor thread has finished
[2026-01-09 09:08:52] 2026-01-09 14:08:10,892 | INFO     | [job] retrieve thread has finished
[2026-01-09 09:08:52] 2026-01-09 14:08:10,892 | INFO     | [job] job monitor thread has finished
[2026-01-09 09:08:52] 2026-01-09 14:08:10,901 | INFO     | all data control threads have been joined
[2026-01-09 09:08:52] 2026-01-09 14:08:10,901 | INFO     | all payload control threads have been joined
[2026-01-09 09:08:52] 2026-01-09 14:08:10,907 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 09:08:52] 2026-01-09 14:08:10,928 | INFO     | [payload] validate_post thread has finished
[2026-01-09 09:08:52] 2026-01-09 14:08:10,930 | INFO     | [job] control thread has finished
[2026-01-09 09:08:52] 2026-01-09 14:08:11,127 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 09:08:52] 2026-01-09 14:08:11,147 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 09:08:52] 2026-01-09 14:08:11,525 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 09:08:52] 2026-01-09 14:08:11,875 | INFO     | [job] validate thread has finished
[2026-01-09 09:08:52] 2026-01-09 14:08:11,876 | INFO     | [data] copytool_in thread has finished
[2026-01-09 09:08:52] 2026-01-09 14:08:11,906 | INFO     | [data] control thread has finished
[2026-01-09 09:08:52] 2026-01-09 14:08:11,907 | INFO     | [payload] control thread has finished
[2026-01-09 09:08:52] 2026-01-09 14:08:12,138 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 09:08:52] 2026-01-09 14:08:12,138 | INFO     | [payload] failed_post thread has finished
[2026-01-09 09:08:52] 2026-01-09 14:08:13,150 | INFO     | [data] copytool_out thread has finished
[2026-01-09 09:08:52] 2026-01-09 14:08:14,743 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 09:08:52] 2026-01-09 14:08:39,570 | INFO     | PID=8550 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-09 09:08:52] 2026-01-09 14:08:39,570 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 09:08:52] 2026-01-09 14:08:39,570 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 09:08:52] 2026-01-09 14:08:39,571 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 09:08:52] 2026-01-09 14:08:46,939 | INFO     | [monitor] cgroup control has ended
[2026-01-09 09:08:52] 2026-01-09 14:08:47,610 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139870328301376)>', '<ExcThread(monitor, started 139869728777984)>']
[2026-01-09 09:08:52] 2026-01-09 14:08:48,615 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 09:08:52] 2026-01-09 14:08:48,615 | INFO     | [monitor] control thread has ended
[2026-01-09 09:08:52] 2026-01-09 14:08:52,615 | INFO     | all workflow threads have been joined
[2026-01-09 09:08:52] 2026-01-09 14:08:52,615 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 09:08:52] 2026-01-09 14:08:52,615 | INFO     | traces error code: 0
[2026-01-09 09:08:52] 2026-01-09 14:08:52,615 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 09:08:52] 2026-01-09 14:08:52,729 [wrapper] ==== pilot stdout END ====
[2026-01-09 09:08:52] 2026-01-09 14:08:52,734 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 09:08:52] 2026-01-09 14:08:52,738 [wrapper] pilotpid: 8550
[2026-01-09 09:08:52] 2026-01-09 14:08:52,743 [wrapper] Pilot exit status: 0
[2026-01-09 09:08:52] 2026-01-09 14:08:52,762 [wrapper] pandaids: 6963160849
[2026-01-09 09:08:52] 2026-01-09 14:08:52,814 [wrapper] cleanup supervisor_pilot 22236 8551
[2026-01-09 09:08:52] 2026-01-09 14:08:52,820 [wrapper] Test setup, not cleaning
[2026-01-09 09:08:52] 2026-01-09 14:08:52,824 [wrapper] apfmon messages muted
[2026-01-09 09:08:52] 2026-01-09 14:08:52,829 [wrapper] ==== wrapper stdout END ====
[2026-01-09 09:08:52] 2026-01-09 14:08:52,834 [wrapper] ==== wrapper stderr END ====
[2026-01-09 09:08:52]  *** Error codes and diagnostics ***
[2026-01-09 09:08:52]     "exeErrorCode": 0,
[2026-01-09 09:08:52]     "exeErrorDiag": "",
[2026-01-09 09:08:52]     "pilotErrorCode": 0,
[2026-01-09 09:08:52]     "pilotErrorDiag": "",
[2026-01-09 09:08:52]  *** Listing of results directory ***
[2026-01-09 09:08:52] total 439344
[2026-01-09 09:08:52] -rw-r--r-- 1 boincer umatlas    597923 Jan  7 08:01 pilot3.tar.gz
[2026-01-09 09:08:52] -rwx------ 1 boincer umatlas     36322 Jan  8 16:47 runpilot2-wrapper.sh
[2026-01-09 09:08:52] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 16:50 queuedata.json
[2026-01-09 09:08:52] -rw-r--r-- 1 boincer umatlas       100 Jan  9 06:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 09:08:52] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 06:09 run_atlas
[2026-01-09 09:08:52] -rw-r--r-- 1 boincer umatlas       105 Jan  9 06:09 job.xml
[2026-01-09 09:08:52] -rw-r--r-- 2 boincer umatlas 222022961 Jan  9 06:09 EVNT.47898824._001262.pool.root.1
[2026-01-09 09:08:52] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 06:09 start_atlas.sh
[2026-01-09 09:08:52] drwxrwx--x 2 boincer umatlas      4096 Jan  9 06:09 shared
[2026-01-09 09:08:52] -rw-r--r-- 2 boincer umatlas    610543 Jan  9 06:09 input.tar.gz
[2026-01-09 09:08:52] -rw-r--r-- 1 boincer umatlas         0 Jan  9 06:09 boinc_lockfile
[2026-01-09 09:08:52] -rw-r--r-- 1 boincer umatlas      2520 Jan  9 06:09 pandaJob.out
[2026-01-09 09:08:52] -rw------- 1 boincer umatlas        57 Jan  9 06:09 setup.sh.local
[2026-01-09 09:08:52] -rw------- 1 boincer umatlas    989369 Jan  9 06:09 agis_schedconf.cvmfs.json
[2026-01-09 09:08:52] -rw------- 1 boincer umatlas   1516240 Jan  9 06:09 agis_ddmendpoints.agis.ALL.json
[2026-01-09 09:08:52] drwx------ 7 boincer umatlas      4096 Jan  9 06:09 pilot3
[2026-01-09 09:08:52] -rw-r--r-- 1 boincer umatlas      5911 Jan  9 09:03 init_data.xml
[2026-01-09 09:08:52] -rw------- 1 boincer umatlas 220083672 Jan  9 09:07 HITS.47898826._032672.pool.root.1
[2026-01-09 09:08:52] -rw-r--r-- 1 boincer umatlas       530 Jan  9 09:07 boinc_task_state.xml
[2026-01-09 09:08:52] -rw------- 1 boincer umatlas      1048 Jan  9 09:07 memory_monitor_summary.json
[2026-01-09 09:08:52] -rw------- 1 boincer umatlas    424920 Jan  9 09:07 log.47898826._032672.job.log.tgz.1
[2026-01-09 09:08:52] -rw------- 1 boincer umatlas        95 Jan  9 09:08 pilot_heartbeat.json
[2026-01-09 09:08:52] -rw------- 1 boincer umatlas      7844 Jan  9 09:08 heartbeat.json
[2026-01-09 09:08:52] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 09:08 boinc_mmap_file
[2026-01-09 09:08:52] -rw-r--r-- 1 boincer umatlas        28 Jan  9 09:08 wrapper_checkpoint.txt
[2026-01-09 09:08:52] -rw------- 1 boincer umatlas      4745 Jan  9 09:08 pilotlog.txt
[2026-01-09 09:08:52] -rw------- 1 boincer umatlas   1492060 Jan  9 09:08 log.47898826._032672.job.log.1
[2026-01-09 09:08:52] -rw------- 1 boincer umatlas       357 Jan  9 09:08 output.list
[2026-01-09 09:08:52] -rw-r--r-- 1 boincer umatlas       620 Jan  9 09:08 runtime_log
[2026-01-09 09:08:52] -rw------- 1 boincer umatlas   1935360 Jan  9 09:08 result.tar.gz
[2026-01-09 09:08:52] -rw------- 1 boincer umatlas       662 Jan  9 09:08 YWcMDmO2Cy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmoZlKDmmFqHan.diag
[2026-01-09 09:08:52] -rw-r--r-- 1 boincer umatlas      9343 Jan  9 09:08 runtime_log.err
[2026-01-09 09:08:52] -rw-r--r-- 1 boincer umatlas     20858 Jan  9 09:08 stderr.txt
[2026-01-09 09:08:53] HITS file was successfully produced:
[2026-01-09 09:08:53] -rw------- 1 boincer umatlas 220083672 Jan  9 09:07 shared/HITS.pool.root.1
[2026-01-09 09:08:53]  *** Contents of shared directory: ***
[2026-01-09 09:08:53] total 434256
[2026-01-09 09:08:53] -rw-r--r-- 2 boincer umatlas 222022961 Jan  9 06:09 ATLAS.root_0
[2026-01-09 09:08:53] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 06:09 start_atlas.sh
[2026-01-09 09:08:53] -rw-r--r-- 2 boincer umatlas    610543 Jan  9 06:09 input.tar.gz
[2026-01-09 09:08:53] -rw------- 1 boincer umatlas 220083672 Jan  9 09:07 HITS.pool.root.1
[2026-01-09 09:08:53] -rw------- 1 boincer umatlas   1935360 Jan  9 09:08 result.tar.gz
09:08:54 (4854): run_atlas exited; CPU time 80857.831534
09:08:54 (4854): called boinc_finish(0)

</stderr_txt>
]]>

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