Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:04:35 (122124): wrapper (7.7.26015): starting
16:04:35 (122124): wrapper: running run_atlas (--nthreads 4)
[2026-01-09 16:04:35] Arguments: --nthreads 4
[2026-01-09 16:04:35] Threads: 4
[2026-01-09 16:04:35] Checking for CVMFS
[2026-01-09 16:04:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 16:04:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 16:04:35] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 16:04:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 16:04:35] 2.9.2.0 3040 398 64760 154947 2 56 20515336 36864001 0 130560 0 285411 99.985 17895 9262 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-09 16:04:35] CVMFS is ok
[2026-01-09 16:04:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 16:04:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 16:04:35] Further information can be found at the LHC@home message board.
[2026-01-09 16:04:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 16:04:35] Checking for apptainer binary...
[2026-01-09 16:04:35] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 16:04:35] Running /usr/bin/apptainer --version
[2026-01-09 16:04:35] apptainer version 1.4.1-1.1
[2026-01-09 16:04:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 16:04:35] cosA131
[2026-01-09 16:04:35] apptainer works
[2026-01-09 16:04:35] Set ATHENA_PROC_NUMBER=4
[2026-01-09 16:04:35] Set ATHENA_CORE_NUMBER=4
[2026-01-09 16:04:35] Starting ATLAS job with PandaID=6963190157
[2026-01-09 16:04:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 17:41:04]  *** The last 200 lines of the pilot log: ***
[2026-01-09 17:41:04]  scope=mc23_13p6TeV
[2026-01-09 17:41:04]  status=None
[2026-01-09 17:41:04]  status_code=0
[2026-01-09 17:41:04]  storage_token=
[2026-01-09 17:41:04]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6963190157/log.47898826._038742.job.log.tgz.1
[2026-01-09 17:41:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/27/c3/log.47898826._038742.job.log.tgz.1
[2026-01-09 17:41:04]  workdir=None
[2026-01-09 17:41:04] ]
[2026-01-09 17:41:04] 2026-01-09 16:40:23,083 | INFO     | transferring file log.47898826._038742.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6963190157/log.47898826._038742.job.log.tgz.1 to /local/data/boinc/
[2026-01-09 17:41:04] 2026-01-09 16:40:23,083 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6963190157/log.47898826._038742.job.log.tgz.1 /local/data/boinc/slots/0/log.47898826._0387
[2026-01-09 17:41:04] 2026-01-09 16:40:23,101 | INFO     | adding to output.list: log.47898826._038742.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/27/c3/log.47898826._038742.job.log.tg
[2026-01-09 17:41:04] 2026-01-09 16:40:23,101 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-09 17:41:04] 2026-01-09 16:40:23,101 | INFO     | summary of transferred files:
[2026-01-09 17:41:04] 2026-01-09 16:40:23,101 | INFO     |  -- lfn=log.47898826._038742.job.log.tgz.1, status_code=0, status=transferred
[2026-01-09 17:41:04] 2026-01-09 16:40:23,101 | INFO     | stage-out finished correctly
[2026-01-09 17:41:04] 2026-01-09 16:40:24,749 | INFO     | time since job start (5742s) is within the limit (349056.0s)
[2026-01-09 17:41:04] 2026-01-09 16:40:25,023 | WARNING  | process 132474 can no longer be monitored (due to stat problems) - aborting
[2026-01-09 17:41:04] 2026-01-09 16:40:25,023 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6963190157/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 17:41:04] 2026-01-09 16:40:25,062 | INFO     | number of running child processes to parent process 132474: 1
[2026-01-09 17:41:04] 2026-01-09 16:40:25,062 | INFO     | maximum number of monitored processes: 6
[2026-01-09 17:41:04] 2026-01-09 16:40:26,250 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-09 17:41:04] 2026-01-09 16:40:26,755 | INFO     | time since job start (5744s) is within the limit (349056.0s)
[2026-01-09 17:41:04] 2026-01-09 16:40:27,566 | INFO     | monitor loop #440: job 0:6963190157 is in state 'finished'
[2026-01-09 17:41:04] 2026-01-09 16:40:27,566 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 17:41:04] 2026-01-09 16:40:28,757 | INFO     | time since job start (5746s) is within the limit (349056.0s)
[2026-01-09 17:41:04] 2026-01-09 16:40:28,912 | INFO     | job 6963190157 has state=finished
[2026-01-09 17:41:04] 2026-01-09 16:40:28,913 | INFO     | preparing for final server update for job 6963190157 in state='finished'
[2026-01-09 17:41:04] 2026-01-09 16:40:28,913 | INFO     | this job has now completed (state=finished)
[2026-01-09 17:41:04] 2026-01-09 16:40:28,913 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-09 17:41:04] 2026-01-09 16:40:28,913 | INFO     | log transfer has been attempted: DONE
[2026-01-09 17:41:04] 2026-01-09 16:40:28,913 | INFO     | job 6963190157 has finished - writing final server update
[2026-01-09 17:41:04] 2026-01-09 16:40:28,913 | INFO     | total number of processed events: 400 (read)
[2026-01-09 17:41:04] 2026-01-09 16:40:28,914 | INFO     | executing command: lscpu
[2026-01-09 17:41:04] 2026-01-09 16:40:28,934 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 17:41:04] 2026-01-09 16:40:30,069 | INFO     | monitor loop #441: job 0:6963190157 is in state 'finished'
[2026-01-09 17:41:04] 2026-01-09 16:40:30,069 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 17:41:04] 2026-01-09 16:40:30,763 | INFO     | time since job start (5748s) is within the limit (349056.0s)
[2026-01-09 17:41:04] 2026-01-09 16:40:31,839 | INFO     | PID=125903 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 17:41:04] 2026-01-09 16:40:32,018 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 17:41:04] 2026-01-09 16:40:32,019 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3344.91525
[2026-01-09 17:41:04] 2026-01-09 16:40:32,021 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6963190157/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 17:41:04] 2026-01-09 16:40:32,021 | INFO     | extracted standard info from prmon json
[2026-01-09 17:41:04] 2026-01-09 16:40:32,021 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 17:41:04] 2026-01-09 16:40:32,021 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 17:41:04] 2026-01-09 16:40:32,021 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 17:41:04] 2026-01-09 16:40:32,021 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 17:41:04] 2026-01-09 16:40:32,022 | INFO     | fitting pss+swap vs Time
[2026-01-09 17:41:04] 2026-01-09 16:40:32,022 | INFO     | sum of square deviations: 204163828.0
[2026-01-09 17:41:04] 2026-01-09 16:40:32,022 | INFO     | sum of deviations: -3403362935.0
[2026-01-09 17:41:04] 2026-01-09 16:40:32,022 | INFO     | mean x: 1767974033.0
[2026-01-09 17:41:04] 2026-01-09 16:40:32,022 | INFO     | mean y: 2421131.793103448
[2026-01-09 17:41:04] 2026-01-09 16:40:32,022 | INFO     | intersect: 29474131928.451298
[2026-01-09 17:41:04] 2026-01-09 16:40:32,022 | INFO     | chi2: 0.0594700547724528
[2026-01-09 17:41:04] 2026-01-09 16:40:32,022 | INFO     | current memory leak: -16.67 B/s (using 87 data points, chi2=0.06)
[2026-01-09 17:41:04] 2026-01-09 16:40:32,023 | INFO     | could have reported an average CPU frequency of 3735 MHz (7 samples)
[2026-01-09 17:41:04] 2026-01-09 16:40:32,023 | INFO     | ..............................
[2026-01-09 17:41:04] 2026-01-09 16:40:32,023 | INFO     | . Timing measurements:
[2026-01-09 17:41:04] 2026-01-09 16:40:32,023 | INFO     | . get job = 0 s
[2026-01-09 17:41:04] 2026-01-09 16:40:32,023 | INFO     | . initial setup = 1 s
[2026-01-09 17:41:04] 2026-01-09 16:40:32,023 | INFO     | . payload setup = 3 s
[2026-01-09 17:41:04] 2026-01-09 16:40:32,023 | INFO     | . stage-in = 0 s
[2026-01-09 17:41:04] 2026-01-09 16:40:32,023 | INFO     | . payload execution = 5718 s
[2026-01-09 17:41:04] 2026-01-09 16:40:32,023 | INFO     | . stage-out = 0 s
[2026-01-09 17:41:04] 2026-01-09 16:40:32,023 | INFO     | . log creation = 0 s
[2026-01-09 17:41:04] 2026-01-09 16:40:32,023 | INFO     | ..............................
[2026-01-09 17:41:04] 2026-01-09 16:40:32,186 | INFO     | 
[2026-01-09 17:41:04] 2026-01-09 16:40:32,186 | INFO     | job summary report
[2026-01-09 17:41:04] 2026-01-09 16:40:32,186 | INFO     | --------------------------------------------------
[2026-01-09 17:41:04] 2026-01-09 16:40:32,186 | INFO     | PanDA job id: 6963190157
[2026-01-09 17:41:04] 2026-01-09 16:40:32,186 | INFO     | task id: 47898826
[2026-01-09 17:41:04] 2026-01-09 16:40:32,186 | INFO     | errors: (none)
[2026-01-09 17:41:04] 2026-01-09 16:40:32,186 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 17:41:04] 2026-01-09 16:40:32,186 | INFO     | pilot state: finished 
[2026-01-09 17:41:04] 2026-01-09 16:40:32,187 | INFO     | transexitcode: 0
[2026-01-09 17:41:04] 2026-01-09 16:40:32,187 | INFO     | exeerrorcode: 0
[2026-01-09 17:41:04] 2026-01-09 16:40:32,187 | INFO     | exeerrordiag: 
[2026-01-09 17:41:04] 2026-01-09 16:40:32,187 | INFO     | exitcode: 0
[2026-01-09 17:41:04] 2026-01-09 16:40:32,187 | INFO     | exitmsg: OK
[2026-01-09 17:41:04] 2026-01-09 16:40:32,187 | INFO     | cpuconsumptiontime: 21968 s
[2026-01-09 17:41:04] 2026-01-09 16:40:32,187 | INFO     | nevents: 400
[2026-01-09 17:41:04] 2026-01-09 16:40:32,187 | INFO     | neventsw: 0
[2026-01-09 17:41:04] 2026-01-09 16:40:32,187 | INFO     | pid: 132474
[2026-01-09 17:41:04] 2026-01-09 16:40:32,187 | INFO     | pgrp: 132474
[2026-01-09 17:41:04] 2026-01-09 16:40:32,187 | INFO     | corecount: 4
[2026-01-09 17:41:04] 2026-01-09 16:40:32,187 | INFO     | event service: False
[2026-01-09 17:41:04] 2026-01-09 16:40:32,187 | INFO     | sizes: {0: 2283803, 1: 2284002, 4: 2284264, 11: 2284292, 5726: 2311095, 5727: 2320099, 5730: 2320283, 5736: 2320477}
[2026-01-09 17:41:04] 2026-01-09 16:40:32,187 | INFO     | --------------------------------------------------
[2026-01-09 17:41:04] 2026-01-09 16:40:32,187 | INFO     | 
[2026-01-09 17:41:04] 2026-01-09 16:40:32,187 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-01-09 17:41:04] 2026-01-09 16:40:32,205 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 17:41:04] 2026-01-09 16:40:32,205 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 17:41:04] 2026-01-09 16:40:32,205 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 17:41:04] 2026-01-09 16:40:32,205 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 17:41:04] 2026-01-09 16:40:32,205 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 17:41:04] 2026-01-09 16:40:32,205 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 17:41:04] 2026-01-09 16:40:32,205 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 17:41:04] 2026-01-09 16:40:32,205 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 17:41:04] 2026-01-09 16:40:32,205 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 17:41:04] 2026-01-09 16:40:32,205 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 17:41:04] 2026-01-09 16:40:32,205 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 17:41:04] 2026-01-09 16:40:32,205 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 17:41:04] 2026-01-09 16:40:32,205 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 17:41:04] 2026-01-09 16:40:32,205 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 17:41:04] 2026-01-09 16:40:32,205 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 17:41:04] 2026-01-09 16:40:32,205 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 17:41:04] 2026-01-09 16:40:32,205 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 17:41:04] 2026-01-09 16:40:32,205 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 17:41:04] 2026-01-09 16:40:32,205 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 17:41:04] 2026-01-09 16:40:32,206 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 17:41:04] 2026-01-09 16:40:32,206 | INFO     | job 6963190157 has completed (purged errors)
[2026-01-09 17:41:04] 2026-01-09 16:40:32,206 | INFO     | overall cleanup function is called
[2026-01-09 17:41:04] 2026-01-09 16:40:33,212 | INFO     | --- collectZombieJob: --- 10, [132474]
[2026-01-09 17:41:04] 2026-01-09 16:40:33,212 | INFO     | zombie collector waiting for pid 132474
[2026-01-09 17:41:04] 2026-01-09 16:40:33,212 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 17:41:04] 2026-01-09 16:40:33,212 | INFO     | collected zombie processes
[2026-01-09 17:41:04] 2026-01-09 16:40:33,213 | INFO     | will attempt to kill all subprocesses of pid=132474
[2026-01-09 17:41:04] 2026-01-09 16:40:33,255 | INFO     | process IDs to be killed: [132474] (in reverse order)
[2026-01-09 17:41:04] 2026-01-09 16:40:33,287 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 17:41:04] 2026-01-09 16:40:33,287 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 17:41:04] 2026-01-09 16:40:33,289 | INFO     | did not find any defunct processes belonging to 132474
[2026-01-09 17:41:04] 2026-01-09 16:40:33,290 | INFO     | did not find any defunct processes belonging to 132474
[2026-01-09 17:41:04] 2026-01-09 16:40:33,290 | INFO     | ready for new job
[2026-01-09 17:41:04] 2026-01-09 16:40:33,290 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 17:41:04] 2026-01-09 16:40:33,291 | INFO     | ***************************************
[2026-01-09 17:41:04] 2026-01-09 16:40:33,291 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 17:41:04] 2026-01-09 16:40:33,291 | INFO     | ***************************************
[2026-01-09 17:41:04] 2026-01-09 16:40:33,291 | INFO     | 
[2026-01-09 17:41:04] 2026-01-09 16:40:33,292 | INFO     | architecture information:
[2026-01-09 17:41:04] 2026-01-09 16:40:33,292 | INFO     | executing command: cat /etc/os-release
[2026-01-09 17:41:04] 2026-01-09 16:40:33,304 | INFO     | cat /etc/os-release:
[2026-01-09 17:41:04] NAME="CentOS Linux"
[2026-01-09 17:41:04] VERSION="7 (Core)"
[2026-01-09 17:41:04] ID="centos"
[2026-01-09 17:41:04] ID_LIKE="rhel fedora"
[2026-01-09 17:41:04] VERSION_ID="7"
[2026-01-09 17:41:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 17:41:04] ANSI_COLOR="0;31"
[2026-01-09 17:41:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 17:41:04] HOME_URL="https://www.centos.org/"
[2026-01-09 17:41:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 17:41:04] 
[2026-01-09 17:41:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 17:41:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 17:41:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 17:41:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 17:41:04] 
[2026-01-09 17:41:04] 2026-01-09 16:40:33,305 | INFO     | ***************************************
[2026-01-09 17:41:04] 2026-01-09 16:40:33,808 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-09 17:41:04] 2026-01-09 16:40:33,825 | INFO     | sufficient remaining disk space (340563853312 B)
[2026-01-09 17:41:04] 2026-01-09 16:40:33,825 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 17:41:04] 2026-01-09 16:40:33,826 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 17:41:04] 2026-01-09 16:40:33,826 | INFO     | update_server=False
[2026-01-09 17:41:04] 2026-01-09 16:40:33,826 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 17:41:04] 2026-01-09 16:40:33,826 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 17:41:04] 2026-01-09 16:40:33,826 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 17:41:04] 2026-01-09 16:40:33,826 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 17:41:04] 2026-01-09 16:40:33,826 | INFO     | aborting loop
[2026-01-09 17:41:04] 2026-01-09 16:40:34,124 | INFO     | all job control threads have been joined
[2026-01-09 17:41:04] 2026-01-09 16:40:34,193 | INFO     | all payload control threads have been joined
[2026-01-09 17:41:04] 2026-01-09 16:40:34,203 | INFO     | all data control threads have been joined
[2026-01-09 17:41:04] 2026-01-09 16:40:34,831 | INFO     | [job] retrieve thread has finished
[2026-01-09 17:41:04] 2026-01-09 16:40:34,832 | INFO     | [job] queue monitor thread has finished
[2026-01-09 17:41:04] 2026-01-09 16:40:34,832 | INFO     | [job] job monitor thread has finished
[2026-01-09 17:41:04] 2026-01-09 16:40:34,914 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 17:41:04] 2026-01-09 16:40:35,096 | INFO     | [data] copytool_in thread has finished
[2026-01-09 17:41:04] 2026-01-09 16:40:35,130 | INFO     | [job] control thread has finished
[2026-01-09 17:41:04] 2026-01-09 16:40:35,199 | INFO     | [payload] control thread has finished
[2026-01-09 17:41:04] 2026-01-09 16:40:35,209 | INFO     | [data] control thread has finished
[2026-01-09 17:41:04] 2026-01-09 16:40:35,437 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 17:41:04] 2026-01-09 16:40:35,742 | INFO     | [payload] failed_post thread has finished
[2026-01-09 17:41:04] 2026-01-09 16:40:35,832 | INFO     | [data] copytool_out thread has finished
[2026-01-09 17:41:04] 2026-01-09 16:40:36,266 | INFO     | [job] validate thread has finished
[2026-01-09 17:41:04] 2026-01-09 16:40:36,278 | INFO     | [payload] validate_post thread has finished
[2026-01-09 17:41:04] 2026-01-09 16:40:36,322 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 17:41:04] 2026-01-09 16:40:36,802 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 17:41:04] 2026-01-09 16:40:40,809 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 17:41:04] 2026-01-09 16:40:44,815 | INFO     | job.realtimelogging is not enabled
[2026-01-09 17:41:04] 2026-01-09 16:40:45,821 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 17:41:04] 2026-01-09 16:40:48,570 | INFO     | [monitor] cgroup control has ended
[2026-01-09 17:41:04] 2026-01-09 16:40:49,338 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139865789015872)>', '<ExcThread(monitor, started 139865064728320)>']
[2026-01-09 17:41:04] 2026-01-09 16:40:54,364 | INFO     | all workflow threads have been joined
[2026-01-09 17:41:04] 2026-01-09 16:40:54,364 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 17:41:04] 2026-01-09 16:40:54,364 | INFO     | traces error code: 0
[2026-01-09 17:41:04] 2026-01-09 16:40:54,364 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 17:41:04] 2026-01-09 16:41:03,944 | INFO     | PID=125903 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 17:41:04] 2026-01-09 16:41:03,944 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 17:41:04] 2026-01-09 16:41:03,944 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 17:41:04] 2026-01-09 16:41:03,944 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 17:41:04] 2026-01-09 16:41:03,944 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 17:41:04] 2026-01-09 16:41:03,944 | INFO     | [monitor] control thread has ended
[2026-01-09 17:41:04] 2026-01-09 16:41:04,018 [wrapper] ==== pilot stdout END ====
[2026-01-09 17:41:04] 2026-01-09 16:41:04,023 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 17:41:04] 2026-01-09 16:41:04,026 [wrapper] pilotpid: 125903
[2026-01-09 17:41:04] 2026-01-09 16:41:04,030 [wrapper] Pilot exit status: 0
[2026-01-09 17:41:04] 2026-01-09 16:41:04,041 [wrapper] pandaids: 6963190157
[2026-01-09 17:41:04] 2026-01-09 16:41:04,062 [wrapper] cleanup supervisor_pilot  144744 125904
[2026-01-09 17:41:04] 2026-01-09 16:41:04,065 [wrapper] Test setup, not cleaning
[2026-01-09 17:41:04] 2026-01-09 16:41:04,069 [wrapper] apfmon messages muted
[2026-01-09 17:41:04] 2026-01-09 16:41:04,073 [wrapper] ==== wrapper stdout END ====
[2026-01-09 17:41:04] 2026-01-09 16:41:04,076 [wrapper] ==== wrapper stderr END ====
[2026-01-09 17:41:04]  *** Error codes and diagnostics ***
[2026-01-09 17:41:04]     "exeErrorCode": 0,
[2026-01-09 17:41:04]     "exeErrorDiag": "",
[2026-01-09 17:41:04]     "pilotErrorCode": 0,
[2026-01-09 17:41:04]     "pilotErrorDiag": "",
[2026-01-09 17:41:04]  *** Listing of results directory ***
[2026-01-09 17:41:04] total 439956
[2026-01-09 17:41:04] -rw-r--r-- 1 boinc boinc    579449 Jan  9 05:21 pilot3.tar.gz
[2026-01-09 17:41:04] -rwx------ 1 boinc boinc     36322 Jan  9 05:23 runpilot2-wrapper.sh
[2026-01-09 17:41:04] -rw-r--r-- 1 boinc boinc      5112 Jan  9 05:24 queuedata.json
[2026-01-09 17:41:04] -rw-r--r-- 1 boinc boinc       100 Jan  9 16:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 17:41:04] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 16:04 run_atlas
[2026-01-09 17:41:04] -rw-r--r-- 1 boinc boinc       105 Jan  9 16:04 job.xml
[2026-01-09 17:41:04] -rw-r--r-- 2 boinc boinc 223561411 Jan  9 16:04 EVNT.47898824._001488.pool.root.1
[2026-01-09 17:41:04] -rw-r--r-- 2 boinc boinc    592403 Jan  9 16:04 input.tar.gz
[2026-01-09 17:41:04] -rw-r--r-- 2 boinc boinc     15847 Jan  9 16:04 start_atlas.sh
[2026-01-09 17:41:04] drwxrwx--x 2 boinc boinc      4096 Jan  9 16:04 shared
[2026-01-09 17:41:04] -rw-r--r-- 1 boinc boinc         0 Jan  9 16:04 boinc_setup_complete
[2026-01-09 17:41:04] -rw-r--r-- 1 boinc boinc      6377 Jan  9 16:04 init_data.xml
[2026-01-09 17:41:04] -rw-r--r-- 1 boinc boinc         0 Jan  9 16:04 boinc_lockfile
[2026-01-09 17:41:04] -rw-r--r-- 1 boinc boinc      2520 Jan  9 16:04 pandaJob.out
[2026-01-09 17:41:04] -rw------- 1 boinc boinc    989377 Jan  9 16:04 agis_schedconf.cvmfs.json
[2026-01-09 17:41:04] -rw------- 1 boinc boinc   1516240 Jan  9 16:04 agis_ddmendpoints.agis.ALL.json
[2026-01-09 17:41:04] drwx------ 5 boinc boinc      4096 Jan  9 16:04 pilot3
[2026-01-09 17:41:04] -rw------- 1 boinc boinc 220799058 Jan  9 17:40 HITS.47898826._038742.pool.root.1
[2026-01-09 17:41:04] -rw-r--r-- 1 boinc boinc       530 Jan  9 17:40 boinc_task_state.xml
[2026-01-09 17:41:04] -rw------- 1 boinc boinc        95 Jan  9 17:40 pilot_heartbeat.json
[2026-01-09 17:41:04] -rw------- 1 boinc boinc      1019 Jan  9 17:40 memory_monitor_summary.json
[2026-01-09 17:41:04] -rw------- 1 boinc boinc    286801 Jan  9 17:40 log.47898826._038742.job.log.tgz.1
[2026-01-09 17:41:04] -rw------- 1 boinc boinc      7774 Jan  9 17:40 heartbeat.json
[2026-01-09 17:41:04] -rw-r--r-- 1 boinc boinc      8192 Jan  9 17:40 boinc_mmap_file
[2026-01-09 17:41:04] -rw-r--r-- 1 boinc boinc        27 Jan  9 17:40 wrapper_checkpoint.txt
[2026-01-09 17:41:04] -rw------- 1 boinc boinc       746 Jan  9 17:41 pilotlog.txt
[2026-01-09 17:41:04] -rw------- 1 boinc boinc    835304 Jan  9 17:41 log.47898826._038742.job.log.1
[2026-01-09 17:41:04] -rw------- 1 boinc boinc       357 Jan  9 17:41 output.list
[2026-01-09 17:41:04] -rw-r--r-- 1 boinc boinc       620 Jan  9 17:41 runtime_log
[2026-01-09 17:41:04] -rw------- 1 boinc boinc   1136640 Jan  9 17:41 result.tar.gz
[2026-01-09 17:41:04] -rw-r--r-- 1 boinc boinc      8902 Jan  9 17:41 runtime_log.err
[2026-01-09 17:41:04] -rw------- 1 boinc boinc       660 Jan  9 17:41 gGOODmrCJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmE0gKDmF7IGMo.diag
[2026-01-09 17:41:04] -rw-r--r-- 1 boinc boinc     22078 Jan  9 17:41 stderr.txt
[2026-01-09 17:41:04] HITS file was successfully produced:
[2026-01-09 17:41:04] -rw------- 1 boinc boinc 220799058 Jan  9 17:40 shared/HITS.pool.root.1
[2026-01-09 17:41:04]  *** Contents of shared directory: ***
[2026-01-09 17:41:04] total 435668
[2026-01-09 17:41:04] -rw-r--r-- 2 boinc boinc 223561411 Jan  9 16:04 ATLAS.root_0
[2026-01-09 17:41:04] -rw-r--r-- 2 boinc boinc    592403 Jan  9 16:04 input.tar.gz
[2026-01-09 17:41:04] -rw-r--r-- 2 boinc boinc     15847 Jan  9 16:04 start_atlas.sh
[2026-01-09 17:41:04] -rw------- 1 boinc boinc 220799058 Jan  9 17:40 HITS.pool.root.1
[2026-01-09 17:41:04] -rw------- 1 boinc boinc   1136640 Jan  9 17:41 result.tar.gz
17:41:05 (122124): run_atlas exited; CPU time 21988.187730
17:41:05 (122124): called boinc_finish(0)

</stderr_txt>
]]>

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