Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:34:00 (31434): wrapper (7.7.26015): starting
15:34:00 (31434): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 15:34:00] Arguments: --nthreads 8
[2026-01-09 15:34:00] Threads: 8
[2026-01-09 15:34:00] Checking for CVMFS
[2026-01-09 15:34:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 15:34:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 15:34:00] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 15:34:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 15:34:00] 2.11.2.0 17161 15783 98156 154946 0 56 20742815 25165824 0 130560 0 2056312 99.352 2726490 3220 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 15:34:00] CVMFS is ok
[2026-01-09 15:34:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 15:34:00] Checking for apptainer binary...
[2026-01-09 15:34:00] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 15:34:00] Running /usr/bin/apptainer --version
[2026-01-09 15:34:00] apptainer version 1.3.2-1.el7
[2026-01-09 15:34:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 15:34:02] cg-vwn491.simple-grid.lan
[2026-01-09 15:34:02] apptainer works
[2026-01-09 15:34:02] Set ATHENA_PROC_NUMBER=8
[2026-01-09 15:34:02] Set ATHENA_CORE_NUMBER=8
[2026-01-09 15:34:02] Starting ATLAS job with PandaID=6963190177
[2026-01-09 15:34:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 18:05:39]  *** The last 200 lines of the pilot log: ***
[2026-01-09 18:05:39] 2026-01-09 17:05:13,205 | INFO     | monitor loop #619: job 0:6963190177 is in state 'finished'
[2026-01-09 18:05:39] 2026-01-09 17:05:13,206 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 18:05:39] 2026-01-09 17:05:13,919 | INFO     | time since job start (9056s) is within the limit (349056.0s)
[2026-01-09 18:05:39] 2026-01-09 17:05:15,707 | INFO     | monitor loop #620: job 0:6963190177 is in state 'finished'
[2026-01-09 18:05:39] 2026-01-09 17:05:15,708 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 18:05:39] 2026-01-09 17:05:15,925 | INFO     | time since job start (9058s) is within the limit (349056.0s)
[2026-01-09 18:05:39] 2026-01-09 17:05:15,951 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 18:05:39] 2026-01-09 17:05:15,952 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2026-01-09 18:05:39] 2026-01-09 17:05:15,954 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-6963190177/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 18:05:39] 2026-01-09 17:05:15,955 | INFO     | extracted standard info from prmon json
[2026-01-09 18:05:39] 2026-01-09 17:05:15,955 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 18:05:39] 2026-01-09 17:05:15,955 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 18:05:39] 2026-01-09 17:05:15,956 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 18:05:39] 2026-01-09 17:05:15,956 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 18:05:39] 2026-01-09 17:05:15,959 | INFO     | fitting pss+swap vs Time
[2026-01-09 18:05:39] 2026-01-09 17:05:15,960 | INFO     | sum of square deviations: 1005179777.0
[2026-01-09 18:05:39] 2026-01-09 17:05:15,961 | INFO     | sum of deviations: 5321977421.499999
[2026-01-09 18:05:39] 2026-01-09 17:05:15,961 | INFO     | mean x: 1767973774.5
[2026-01-09 18:05:39] 2026-01-09 17:05:15,961 | INFO     | mean y: 2517133.3986486485
[2026-01-09 18:05:39] 2026-01-09 17:05:15,961 | INFO     | intersect: -9358113397.5647
[2026-01-09 18:05:39] 2026-01-09 17:05:15,961 | INFO     | chi2: 1.620650692055442
[2026-01-09 18:05:39] 2026-01-09 17:05:15,962 | INFO     | sum of square deviations: 906703512.0
[2026-01-09 18:05:39] 2026-01-09 17:05:15,963 | INFO     | sum of deviations: 5360864769.000005
[2026-01-09 18:05:39] 2026-01-09 17:05:15,963 | INFO     | mean x: 1767973622.0
[2026-01-09 18:05:39] 2026-01-09 17:05:15,963 | INFO     | mean y: 2517193.643356643
[2026-01-09 18:05:39] 2026-01-09 17:05:15,963 | INFO     | intersect: -10450588344.455774
[2026-01-09 18:05:39] 2026-01-09 17:05:15,963 | INFO     | chi2: 1.62223450913835
[2026-01-09 18:05:39] 2026-01-09 17:05:15,964 | INFO     | current chi2=1.62223450913835 (change=-0.09772723330648046 %)
[2026-01-09 18:05:39] 2026-01-09 17:05:15,964 | INFO     | right removable region: 142
[2026-01-09 18:05:39] 2026-01-09 17:05:15,964 | INFO     | sum of square deviations: 906703512.0
[2026-01-09 18:05:39] 2026-01-09 17:05:15,965 | INFO     | sum of deviations: -16948214624.000006
[2026-01-09 18:05:39] 2026-01-09 17:05:15,965 | INFO     | mean x: 1767973927.0
[2026-01-09 18:05:39] 2026-01-09 17:05:15,965 | INFO     | mean y: 2551075.062937063
[2026-01-09 18:05:39] 2026-01-09 17:05:15,965 | INFO     | intersect: 33049739232.896076
[2026-01-09 18:05:39] 2026-01-09 17:05:15,965 | INFO     | chi2: 0.14337106018992607
[2026-01-09 18:05:39] 2026-01-09 17:05:15,966 | INFO     | current chi2=0.14337106018992607 (change=91.15348786183584 %)
[2026-01-09 18:05:39] 2026-01-09 17:05:15,966 | INFO     | sum of square deviations: 814878534.5
[2026-01-09 18:05:39] 2026-01-09 17:05:15,967 | INFO     | sum of deviations: -18695650636.0
[2026-01-09 18:05:39] 2026-01-09 17:05:15,967 | INFO     | mean x: 1767974079.5
[2026-01-09 18:05:39] 2026-01-09 17:05:15,967 | INFO     | mean y: 2553920.9565217393
[2026-01-09 18:05:39] 2026-01-09 17:05:15,967 | INFO     | intersect: 40564949817.317795
[2026-01-09 18:05:39] 2026-01-09 17:05:15,968 | INFO     | chi2: 0.11276714962198897
[2026-01-09 18:05:39] 2026-01-09 17:05:15,968 | INFO     | current chi2=0.11276714962198897 (change=21.345947032403597 %)
[2026-01-09 18:05:39] 2026-01-09 17:05:15,968 | INFO     | left removable region: 20
[2026-01-09 18:05:39] 2026-01-09 17:05:15,968 | INFO     | sum of square deviations: 563026370.5
[2026-01-09 18:05:39] 2026-01-09 17:05:15,969 | INFO     | sum of deviations: -9634368303.999992
[2026-01-09 18:05:39] 2026-01-09 17:05:15,969 | INFO     | mean x: 1767974201.5
[2026-01-09 18:05:39] 2026-01-09 17:05:15,969 | INFO     | mean y: 2539132.7213114756
[2026-01-09 18:05:39] 2026-01-09 17:05:15,969 | INFO     | intersect: 30255677354.461662
[2026-01-09 18:05:39] 2026-01-09 17:05:15,970 | INFO     | chi2: 0.08620176039286488
[2026-01-09 18:05:39] 2026-01-09 17:05:15,970 | INFO     | current memory leak: -17.11 B/s (using 122 data points, chi2=0.09)
[2026-01-09 18:05:39] 2026-01-09 17:05:15,970 | INFO     | could have reported an average CPU frequency of 2249 MHz (8 samples)
[2026-01-09 18:05:39] 2026-01-09 17:05:15,971 | INFO     | ..............................
[2026-01-09 18:05:39] 2026-01-09 17:05:15,971 | INFO     | . Timing measurements:
[2026-01-09 18:05:39] 2026-01-09 17:05:15,971 | INFO     | . get job = 0 s
[2026-01-09 18:05:39] 2026-01-09 17:05:15,971 | INFO     | . initial setup = 1 s
[2026-01-09 18:05:39] 2026-01-09 17:05:15,971 | INFO     | . payload setup = 7 s
[2026-01-09 18:05:39] 2026-01-09 17:05:15,971 | INFO     | . stage-in = 0 s
[2026-01-09 18:05:39] 2026-01-09 17:05:15,971 | INFO     | . payload execution = 9018 s
[2026-01-09 18:05:39] 2026-01-09 17:05:15,971 | INFO     | . stage-out = 1 s
[2026-01-09 18:05:39] 2026-01-09 17:05:15,971 | INFO     | . log creation = 0 s
[2026-01-09 18:05:39] 2026-01-09 17:05:15,971 | INFO     | ..............................
[2026-01-09 18:05:39] 2026-01-09 17:05:16,078 | INFO     | 
[2026-01-09 18:05:39] 2026-01-09 17:05:16,079 | INFO     | job summary report
[2026-01-09 18:05:39] 2026-01-09 17:05:16,079 | INFO     | --------------------------------------------------
[2026-01-09 18:05:39] 2026-01-09 17:05:16,079 | INFO     | PanDA job id: 6963190177
[2026-01-09 18:05:39] 2026-01-09 17:05:16,079 | INFO     | task id: 47898826
[2026-01-09 18:05:39] 2026-01-09 17:05:16,079 | INFO     | errors: (none)
[2026-01-09 18:05:39] 2026-01-09 17:05:16,079 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 18:05:39] 2026-01-09 17:05:16,080 | INFO     | pilot state: finished 
[2026-01-09 18:05:39] 2026-01-09 17:05:16,080 | INFO     | transexitcode: 0
[2026-01-09 18:05:39] 2026-01-09 17:05:16,080 | INFO     | exeerrorcode: 0
[2026-01-09 18:05:39] 2026-01-09 17:05:16,080 | INFO     | exeerrordiag: 
[2026-01-09 18:05:39] 2026-01-09 17:05:16,080 | INFO     | exitcode: 0
[2026-01-09 18:05:39] 2026-01-09 17:05:16,080 | INFO     | exitmsg: OK
[2026-01-09 18:05:39] 2026-01-09 17:05:16,080 | INFO     | cpuconsumptiontime: 66930 s
[2026-01-09 18:05:39] 2026-01-09 17:05:16,080 | INFO     | nevents: 400
[2026-01-09 18:05:39] 2026-01-09 17:05:16,080 | INFO     | neventsw: 0
[2026-01-09 18:05:39] 2026-01-09 17:05:16,080 | INFO     | pid: 9215
[2026-01-09 18:05:39] 2026-01-09 17:05:16,081 | INFO     | pgrp: 9215
[2026-01-09 18:05:39] 2026-01-09 17:05:16,081 | INFO     | corecount: 8
[2026-01-09 18:05:39] 2026-01-09 17:05:16,081 | INFO     | event service: False
[2026-01-09 18:05:39] 2026-01-09 17:05:16,081 | INFO     | sizes: {0: 2283800, 1: 2283999, 6: 2284261, 12: 2284289, 9030: 2312139, 9033: 2321137, 9034: 2321321, 9041: 2321515}
[2026-01-09 18:05:39] 2026-01-09 17:05:16,081 | INFO     | --------------------------------------------------
[2026-01-09 18:05:39] 2026-01-09 17:05:16,081 | INFO     | 
[2026-01-09 18:05:39] 2026-01-09 17:05:16,081 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2026-01-09 18:05:39] 2026-01-09 17:05:16,104 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 18:05:39] 2026-01-09 17:05:16,104 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 18:05:39] 2026-01-09 17:05:16,104 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 18:05:39] 2026-01-09 17:05:16,104 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 18:05:39] 2026-01-09 17:05:16,104 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 18:05:39] 2026-01-09 17:05:16,105 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 18:05:39] 2026-01-09 17:05:16,105 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 18:05:39] 2026-01-09 17:05:16,105 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 18:05:39] 2026-01-09 17:05:16,105 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 18:05:39] 2026-01-09 17:05:16,105 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 18:05:39] 2026-01-09 17:05:16,105 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 18:05:39] 2026-01-09 17:05:16,105 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 18:05:39] 2026-01-09 17:05:16,105 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 18:05:39] 2026-01-09 17:05:16,105 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 18:05:39] 2026-01-09 17:05:16,106 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 18:05:39] 2026-01-09 17:05:16,106 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 18:05:39] 2026-01-09 17:05:16,106 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 18:05:39] 2026-01-09 17:05:16,106 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 18:05:39] 2026-01-09 17:05:16,106 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 18:05:39] 2026-01-09 17:05:16,106 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 18:05:39] 2026-01-09 17:05:16,106 | INFO     | job 6963190177 has completed (purged errors)
[2026-01-09 18:05:39] 2026-01-09 17:05:16,106 | INFO     | overall cleanup function is called
[2026-01-09 18:05:39] 2026-01-09 17:05:17,114 | INFO     | --- collectZombieJob: --- 10, [9215]
[2026-01-09 18:05:39] 2026-01-09 17:05:17,115 | INFO     | zombie collector waiting for pid 9215
[2026-01-09 18:05:39] 2026-01-09 17:05:17,115 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 18:05:39] 2026-01-09 17:05:17,115 | INFO     | collected zombie processes
[2026-01-09 18:05:39] 2026-01-09 17:05:17,115 | INFO     | will attempt to kill all subprocesses of pid=9215
[2026-01-09 18:05:39] 2026-01-09 17:05:17,176 | INFO     | process IDs to be killed: [9215] (in reverse order)
[2026-01-09 18:05:39] 2026-01-09 17:05:17,220 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 18:05:39] 2026-01-09 17:05:17,220 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 18:05:39] 2026-01-09 17:05:17,222 | INFO     | did not find any defunct processes belonging to 9215
[2026-01-09 18:05:39] 2026-01-09 17:05:17,223 | INFO     | did not find any defunct processes belonging to 9215
[2026-01-09 18:05:39] 2026-01-09 17:05:17,224 | INFO     | ready for new job
[2026-01-09 18:05:39] 2026-01-09 17:05:17,224 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 18:05:39] 2026-01-09 17:05:17,225 | INFO     | ***************************************
[2026-01-09 18:05:39] 2026-01-09 17:05:17,226 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 18:05:39] 2026-01-09 17:05:17,226 | INFO     | ***************************************
[2026-01-09 18:05:39] 2026-01-09 17:05:17,226 | INFO     | 
[2026-01-09 18:05:39] 2026-01-09 17:05:17,226 | INFO     | pilot is running in a VM
[2026-01-09 18:05:39] 2026-01-09 17:05:17,227 | INFO     | architecture information:
[2026-01-09 18:05:39] 2026-01-09 17:05:17,227 | INFO     | executing command: cat /etc/os-release
[2026-01-09 18:05:39] 2026-01-09 17:05:17,248 | INFO     | cat /etc/os-release:
[2026-01-09 18:05:39] NAME="CentOS Linux"
[2026-01-09 18:05:39] VERSION="7 (Core)"
[2026-01-09 18:05:39] ID="centos"
[2026-01-09 18:05:39] ID_LIKE="rhel fedora"
[2026-01-09 18:05:39] VERSION_ID="7"
[2026-01-09 18:05:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 18:05:39] ANSI_COLOR="0;31"
[2026-01-09 18:05:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 18:05:39] HOME_URL="https://www.centos.org/"
[2026-01-09 18:05:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 18:05:39] 
[2026-01-09 18:05:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 18:05:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 18:05:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 18:05:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 18:05:39] 
[2026-01-09 18:05:39] 2026-01-09 17:05:17,248 | INFO     | ***************************************
[2026-01-09 18:05:39] 2026-01-09 17:05:17,751 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2026-01-09 18:05:39] 2026-01-09 17:05:17,771 | INFO     | sufficient remaining disk space (497898487808 B)
[2026-01-09 18:05:39] 2026-01-09 17:05:17,772 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 18:05:39] 2026-01-09 17:05:17,772 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 18:05:39] 2026-01-09 17:05:17,772 | INFO     | update_server=False
[2026-01-09 18:05:39] 2026-01-09 17:05:17,772 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 18:05:39] 2026-01-09 17:05:17,773 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-09 18:05:39] 2026-01-09 17:05:17,773 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 18:05:39] 2026-01-09 17:05:17,774 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 18:05:39] 2026-01-09 17:05:17,774 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 18:05:39] 2026-01-09 17:05:17,774 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 18:05:39] 2026-01-09 17:05:18,130 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 18:05:39] 2026-01-09 17:05:18,211 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 18:05:39] 2026-01-09 17:05:18,212 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 18:05:39] 2026-01-09 17:05:18,212 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 18:05:39] 2026-01-09 17:05:18,212 | INFO     | will abort loop
[2026-01-09 18:05:39] 2026-01-09 17:05:18,420 | INFO     | all job control threads have been joined
[2026-01-09 18:05:39] 2026-01-09 17:05:18,509 | INFO     | all payload control threads have been joined
[2026-01-09 18:05:39] 2026-01-09 17:05:18,566 | INFO     | all data control threads have been joined
[2026-01-09 18:05:39] 2026-01-09 17:05:18,741 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 18:05:39] 2026-01-09 17:05:18,778 | INFO     | [job] retrieve thread has finished
[2026-01-09 18:05:39] 2026-01-09 17:05:18,779 | INFO     | [job] queue monitor thread has finished
[2026-01-09 18:05:39] 2026-01-09 17:05:18,883 | INFO     | [payload] failed_post thread has finished
[2026-01-09 18:05:39] 2026-01-09 17:05:19,004 | INFO     | [payload] validate_post thread has finished
[2026-01-09 18:05:39] 2026-01-09 17:05:19,101 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 18:05:39] 2026-01-09 17:05:19,123 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 18:05:39] 2026-01-09 17:05:19,218 | INFO     | [job] job monitor thread has finished
[2026-01-09 18:05:39] 2026-01-09 17:05:19,426 | INFO     | [job] control thread has finished
[2026-01-09 18:05:39] 2026-01-09 17:05:19,515 | INFO     | [payload] control thread has finished
[2026-01-09 18:05:39] 2026-01-09 17:05:19,537 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 18:05:39] 2026-01-09 17:05:19,572 | INFO     | [data] control thread has finished
[2026-01-09 18:05:39] 2026-01-09 17:05:19,908 | INFO     | [data] copytool_in thread has finished
[2026-01-09 18:05:39] 2026-01-09 17:05:20,034 | INFO     | [job] validate thread has finished
[2026-01-09 18:05:39] 2026-01-09 17:05:20,136 | INFO     | [data] copytool_out thread has finished
[2026-01-09 18:05:39] 2026-01-09 17:05:22,748 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 18:05:39] 2026-01-09 17:05:28,548 | INFO     | job.realtimelogging is not enabled
[2026-01-09 18:05:39] 2026-01-09 17:05:29,554 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 18:05:39] 2026-01-09 17:05:32,176 | INFO     | [monitor] cgroup control has ended
[2026-01-09 18:05:39] 2026-01-09 17:05:34,082 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139949002131264)>', '<ExcThread(monitor, started 139948338435840)>']
[2026-01-09 18:05:39] 2026-01-09 17:05:34,863 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 18:05:39] 2026-01-09 17:05:34,863 | INFO     | [monitor] control thread has ended
[2026-01-09 18:05:39] 2026-01-09 17:05:39,098 | INFO     | all workflow threads have been joined
[2026-01-09 18:05:39] 2026-01-09 17:05:39,099 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 18:05:39] 2026-01-09 17:05:39,099 | INFO     | traces error code: 0
[2026-01-09 18:05:39] 2026-01-09 17:05:39,099 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 18:05:39] 2026-01-09 17:05:39,236 [wrapper] ==== pilot stdout END ====
[2026-01-09 18:05:39] 2026-01-09 17:05:39,241 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 18:05:39] 2026-01-09 17:05:39,247 [wrapper] pilotpid: 2764
[2026-01-09 18:05:39] 2026-01-09 17:05:39,254 [wrapper] Pilot exit status: 0
[2026-01-09 18:05:39] 2026-01-09 17:05:39,275 [wrapper] pandaids: 6963190177
[2026-01-09 18:05:39] 2026-01-09 17:05:39,305 [wrapper] cleanup supervisor_pilot 25720 2765
[2026-01-09 18:05:39] 2026-01-09 17:05:39,310 [wrapper] Test setup, not cleaning
[2026-01-09 18:05:39] 2026-01-09 17:05:39,313 [wrapper] apfmon messages muted
[2026-01-09 18:05:39] 2026-01-09 17:05:39,317 [wrapper] ==== wrapper stdout END ====
[2026-01-09 18:05:39] 2026-01-09 17:05:39,320 [wrapper] ==== wrapper stderr END ====
[2026-01-09 18:05:39]  *** Error codes and diagnostics ***
[2026-01-09 18:05:39]     "exeErrorCode": 0,
[2026-01-09 18:05:39]     "exeErrorDiag": "",
[2026-01-09 18:05:39]     "pilotErrorCode": 0,
[2026-01-09 18:05:39]     "pilotErrorDiag": "",
[2026-01-09 18:05:39]  *** Listing of results directory ***
[2026-01-09 18:05:39] total 446856
[2026-01-09 18:05:39] -rw-r--r--. 1 boinc boinc    579449 Jan  9 05:21 pilot3.tar.gz
[2026-01-09 18:05:39] -rwx------. 1 boinc boinc     36322 Jan  9 05:23 runpilot2-wrapper.sh
[2026-01-09 18:05:39] -rw-r--r--. 1 boinc boinc      5112 Jan  9 05:24 queuedata.json
[2026-01-09 18:05:39] -rw-r--r--. 1 boinc boinc       100 Jan  9 15:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 18:05:39] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 15:34 run_atlas
[2026-01-09 18:05:39] -rw-r--r--. 1 boinc boinc       105 Jan  9 15:34 job.xml
[2026-01-09 18:05:39] -rw-r--r--. 1 boinc boinc      6390 Jan  9 15:34 init_data.xml
[2026-01-09 18:05:39] -rw-r--r--. 2 boinc boinc 228156993 Jan  9 15:34 EVNT.47898824._001489.pool.root.1
[2026-01-09 18:05:39] -rw-r--r--. 2 boinc boinc     15847 Jan  9 15:34 start_atlas.sh
[2026-01-09 18:05:39] drwxrwx--x. 2 boinc boinc        68 Jan  9 15:34 shared
[2026-01-09 18:05:39] -rw-r--r--. 2 boinc boinc    592399 Jan  9 15:34 input.tar.gz
[2026-01-09 18:05:39] -rw-r--r--. 1 boinc boinc         0 Jan  9 15:34 boinc_lockfile
[2026-01-09 18:05:39] -rw-r--r--. 1 boinc boinc      2520 Jan  9 15:34 pandaJob.out
[2026-01-09 18:05:39] -rw-------. 1 boinc boinc    989377 Jan  9 15:34 agis_schedconf.cvmfs.json
[2026-01-09 18:05:39] -rw-------. 1 boinc boinc   1516240 Jan  9 15:34 agis_ddmendpoints.agis.ALL.json
[2026-01-09 18:05:39] drwx------. 5 boinc boinc      4096 Jan  9 15:34 pilot3
[2026-01-09 18:05:39] -rw-------. 1 boinc boinc 222329888 Jan  9 18:04 HITS.47898826._038762.pool.root.1
[2026-01-09 18:05:39] -rw-r--r--. 1 boinc boinc       530 Jan  9 18:04 boinc_task_state.xml
[2026-01-09 18:05:39] -rw-------. 1 boinc boinc      1026 Jan  9 18:05 memory_monitor_summary.json
[2026-01-09 18:05:39] -rw-------. 1 boinc boinc        95 Jan  9 18:05 pilot_heartbeat.json
[2026-01-09 18:05:39] -rw-------. 1 boinc boinc    383255 Jan  9 18:05 log.47898826._038762.job.log.tgz.1
[2026-01-09 18:05:39] -rw-------. 1 boinc boinc      7772 Jan  9 18:05 heartbeat.json
[2026-01-09 18:05:39] -rw-r--r--. 1 boinc boinc      8192 Jan  9 18:05 boinc_mmap_file
[2026-01-09 18:05:39] -rw-r--r--. 1 boinc boinc        27 Jan  9 18:05 wrapper_checkpoint.txt
[2026-01-09 18:05:39] -rw-------. 1 boinc boinc      4873 Jan  9 18:05 pilotlog.txt
[2026-01-09 18:05:39] -rw-------. 1 boinc boinc   1216338 Jan  9 18:05 log.47898826._038762.job.log.1
[2026-01-09 18:05:39] -rw-------. 1 boinc boinc       357 Jan  9 18:05 output.list
[2026-01-09 18:05:39] -rw-r--r--. 1 boinc boinc       620 Jan  9 18:05 runtime_log
[2026-01-09 18:05:39] -rw-------. 1 boinc boinc   1617920 Jan  9 18:05 result.tar.gz
[2026-01-09 18:05:39] -rw-r--r--. 1 boinc boinc      8816 Jan  9 18:05 runtime_log.err
[2026-01-09 18:05:39] -rw-------. 1 boinc boinc       652 Jan  9 18:05 hRXLDmrCJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmnCmKDmWc8OGo.diag
[2026-01-09 18:05:39] -rw-r--r--. 1 boinc boinc     20843 Jan  9 18:05 stderr.txt
[2026-01-09 18:05:39] HITS file was successfully produced:
[2026-01-09 18:05:39] -rw-------. 1 boinc boinc 222329888 Jan  9 18:04 shared/HITS.pool.root.1
[2026-01-09 18:05:39]  *** Contents of shared directory: ***
[2026-01-09 18:05:39] total 442108
[2026-01-09 18:05:39] -rw-r--r--. 2 boinc boinc 228156993 Jan  9 15:34 ATLAS.root_0
[2026-01-09 18:05:39] -rw-r--r--. 2 boinc boinc     15847 Jan  9 15:34 start_atlas.sh
[2026-01-09 18:05:39] -rw-r--r--. 2 boinc boinc    592399 Jan  9 15:34 input.tar.gz
[2026-01-09 18:05:39] -rw-------. 1 boinc boinc 222329888 Jan  9 18:04 HITS.pool.root.1
[2026-01-09 18:05:39] -rw-------. 1 boinc boinc   1617920 Jan  9 18:05 result.tar.gz
18:05:40 (31434): run_atlas exited; CPU time 66989.866334
18:05:40 (31434): called boinc_finish(0)

</stderr_txt>
]]>

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