Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:54:55 (17646): wrapper (7.7.26015): starting
05:54:55 (17646): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 05:54:55] Arguments: --nthreads 12
[2026-01-09 05:54:55] Threads: 12
[2026-01-09 05:54:55] Checking for CVMFS
[2026-01-09 05:54:55] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 05:54:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 05:54:55] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 05:54:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 05:54:55] 2.11.2.0 3165 136569 97828 154940 0 56 13547130 20275201 1 130560 0 50530253 99.887 8114495 40745 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 05:54:55] CVMFS is ok
[2026-01-09 05:54:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 05:54:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 05:54:55] Further information can be found at the LHC@home message board.
[2026-01-09 05:54:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 05:54:55] Checking for apptainer binary...
[2026-01-09 05:54:55] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 05:54:55] Running /usr/bin/apptainer --version
[2026-01-09 05:54:55] apptainer version 1.3.2-1.el7
[2026-01-09 05:54:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 05:54:57] c-115-40.aglt2.org
[2026-01-09 05:54:57] apptainer works
[2026-01-09 05:54:57] Set ATHENA_PROC_NUMBER=12
[2026-01-09 05:54:57] Set ATHENA_CORE_NUMBER=12
[2026-01-09 05:54:57] Starting ATLAS job with PandaID=6963190173
[2026-01-09 05:54:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 07:28:43]  *** The last 200 lines of the pilot log: ***
[2026-01-09 07:28:43]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6963190173/log.47898826._038758.job.log.tgz.1
[2026-01-09 07:28:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/24/c8/log.47898826._038758.job.log.tgz.1
[2026-01-09 07:28:43]  workdir=None
[2026-01-09 07:28:43] ]
[2026-01-09 07:28:43] 2026-01-09 12:28:00,947 | INFO     | transferring file log.47898826._038758.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6963190173/log.47898826._038758.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-09 07:28:43] 2026-01-09 12:28:00,947 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6963190173/log.47898826._038758.job.log.tgz.1 /tmp/boinchome/slots/0/log.47898826._038758.job
[2026-01-09 07:28:43] 2026-01-09 12:28:00,968 | INFO     | adding to output.list: log.47898826._038758.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/24/c8/log.47898826._038758.job.log.tg
[2026-01-09 07:28:43] 2026-01-09 12:28:00,969 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-09 07:28:43] 2026-01-09 12:28:00,970 | INFO     | summary of transferred files:
[2026-01-09 07:28:43] 2026-01-09 12:28:00,970 | INFO     |  -- lfn=log.47898826._038758.job.log.tgz.1, status_code=0, status=transferred
[2026-01-09 07:28:43] 2026-01-09 12:28:00,970 | INFO     | stage-out finished correctly
[2026-01-09 07:28:43] 2026-01-09 12:28:02,100 | WARNING  | process 27897 can no longer be monitored (due to stat problems) - aborting
[2026-01-09 07:28:43] 2026-01-09 12:28:02,101 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963190173/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 07:28:43] 2026-01-09 12:28:02,132 | INFO     | time since job start (5570s) is within the limit (349056.0s)
[2026-01-09 07:28:43] 2026-01-09 12:28:02,187 | INFO     | number of running child processes to parent process 27897: 1
[2026-01-09 07:28:43] 2026-01-09 12:28:02,187 | INFO     | maximum number of monitored processes: 6
[2026-01-09 07:28:43] 2026-01-09 12:28:04,133 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-09 07:28:43] 2026-01-09 12:28:04,144 | INFO     | time since job start (5572s) is within the limit (349056.0s)
[2026-01-09 07:28:43] 2026-01-09 12:28:04,696 | INFO     | monitor loop #414: job 0:6963190173 is in state 'finished'
[2026-01-09 07:28:43] 2026-01-09 12:28:04,696 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 07:28:43] 2026-01-09 12:28:05,819 | INFO     | job 6963190173 has state=finished
[2026-01-09 07:28:43] 2026-01-09 12:28:05,820 | INFO     | preparing for final server update for job 6963190173 in state='finished'
[2026-01-09 07:28:43] 2026-01-09 12:28:05,880 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-09 07:28:43] 2026-01-09 12:28:05,880 | INFO     | this job has now completed (state=finished)
[2026-01-09 07:28:43] 2026-01-09 12:28:05,880 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-09 07:28:43] 2026-01-09 12:28:05,881 | INFO     | log transfer has been attempted: DONE
[2026-01-09 07:28:43] 2026-01-09 12:28:05,881 | INFO     | job 6963190173 has finished - writing final server update
[2026-01-09 07:28:43] 2026-01-09 12:28:05,881 | INFO     | total number of processed events: 400 (read)
[2026-01-09 07:28:43] 2026-01-09 12:28:05,882 | INFO     | executing command: lscpu
[2026-01-09 07:28:43] 2026-01-09 12:28:05,908 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 07:28:43] 2026-01-09 12:28:06,151 | INFO     | time since job start (5574s) is within the limit (349056.0s)
[2026-01-09 07:28:43] 2026-01-09 12:28:07,209 | INFO     | monitor loop #415: job 0:6963190173 is in state 'finished'
[2026-01-09 07:28:43] 2026-01-09 12:28:07,209 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 07:28:43] 2026-01-09 12:28:07,266 | INFO     | PID=21461 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 07:28:43] 2026-01-09 12:28:08,266 | INFO     | time since job start (5576s) is within the limit (349056.0s)
[2026-01-09 07:28:43] 2026-01-09 12:28:09,712 | INFO     | monitor loop #416: job 0:6963190173 is in state 'finished'
[2026-01-09 07:28:43] 2026-01-09 12:28:09,712 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 07:28:43] 2026-01-09 12:28:10,272 | INFO     | time since job start (5578s) is within the limit (349056.0s)
[2026-01-09 07:28:43] 2026-01-09 12:28:10,496 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 07:28:43] 2026-01-09 12:28:10,500 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1751.25
[2026-01-09 07:28:43] 2026-01-09 12:28:10,503 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963190173/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 07:28:43] 2026-01-09 12:28:10,503 | INFO     | extracted standard info from prmon json
[2026-01-09 07:28:43] 2026-01-09 12:28:10,504 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 07:28:43] 2026-01-09 12:28:10,504 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 07:28:43] 2026-01-09 12:28:10,504 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 07:28:43] 2026-01-09 12:28:10,504 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 07:28:43] 2026-01-09 12:28:10,506 | INFO     | fitting pss+swap vs Time
[2026-01-09 07:28:43] 2026-01-09 12:28:10,506 | INFO     | sum of square deviations: 183761585.0
[2026-01-09 07:28:43] 2026-01-09 12:28:10,506 | INFO     | sum of deviations: -2263251829.0000005
[2026-01-09 07:28:43] 2026-01-09 12:28:10,506 | INFO     | mean x: 1767958977.5
[2026-01-09 07:28:43] 2026-01-09 12:28:10,507 | INFO     | mean y: 2714396.6904761903
[2026-01-09 07:28:43] 2026-01-09 12:28:10,507 | INFO     | intersect: 21777321910.13702
[2026-01-09 07:28:43] 2026-01-09 12:28:10,507 | INFO     | chi2: 0.04142111222831936
[2026-01-09 07:28:43] 2026-01-09 12:28:10,507 | INFO     | current memory leak: -12.32 B/s (using 84 data points, chi2=0.04)
[2026-01-09 07:28:43] 2026-01-09 12:28:10,507 | INFO     | could have reported an average CPU frequency of 2103 MHz (7 samples)
[2026-01-09 07:28:43] 2026-01-09 12:28:10,507 | INFO     | ..............................
[2026-01-09 07:28:43] 2026-01-09 12:28:10,508 | INFO     | . Timing measurements:
[2026-01-09 07:28:43] 2026-01-09 12:28:10,508 | INFO     | . get job = 0 s
[2026-01-09 07:28:43] 2026-01-09 12:28:10,508 | INFO     | . initial setup = 2 s
[2026-01-09 07:28:43] 2026-01-09 12:28:10,508 | INFO     | . payload setup = 7 s
[2026-01-09 07:28:43] 2026-01-09 12:28:10,508 | INFO     | . stage-in = 0 s
[2026-01-09 07:28:43] 2026-01-09 12:28:10,508 | INFO     | . payload execution = 5540 s
[2026-01-09 07:28:43] 2026-01-09 12:28:10,508 | INFO     | . stage-out = 0 s
[2026-01-09 07:28:43] 2026-01-09 12:28:10,508 | INFO     | . log creation = 0 s
[2026-01-09 07:28:43] 2026-01-09 12:28:10,508 | INFO     | ..............................
[2026-01-09 07:28:43] 2026-01-09 12:28:10,582 | INFO     | 
[2026-01-09 07:28:43] 2026-01-09 12:28:10,582 | INFO     | job summary report
[2026-01-09 07:28:43] 2026-01-09 12:28:10,583 | INFO     | --------------------------------------------------
[2026-01-09 07:28:43] 2026-01-09 12:28:10,583 | INFO     | PanDA job id: 6963190173
[2026-01-09 07:28:43] 2026-01-09 12:28:10,583 | INFO     | task id: 47898826
[2026-01-09 07:28:43] 2026-01-09 12:28:10,583 | INFO     | errors: (none)
[2026-01-09 07:28:43] 2026-01-09 12:28:10,583 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 07:28:43] 2026-01-09 12:28:10,583 | INFO     | pilot state: finished 
[2026-01-09 07:28:43] 2026-01-09 12:28:10,584 | INFO     | transexitcode: 0
[2026-01-09 07:28:43] 2026-01-09 12:28:10,584 | INFO     | exeerrorcode: 0
[2026-01-09 07:28:43] 2026-01-09 12:28:10,584 | INFO     | exeerrordiag: 
[2026-01-09 07:28:43] 2026-01-09 12:28:10,584 | INFO     | exitcode: 0
[2026-01-09 07:28:43] 2026-01-09 12:28:10,584 | INFO     | exitmsg: OK
[2026-01-09 07:28:43] 2026-01-09 12:28:10,584 | INFO     | cpuconsumptiontime: 60364 s
[2026-01-09 07:28:43] 2026-01-09 12:28:10,585 | INFO     | nevents: 400
[2026-01-09 07:28:43] 2026-01-09 12:28:10,585 | INFO     | neventsw: 0
[2026-01-09 07:28:43] 2026-01-09 12:28:10,585 | INFO     | pid: 27897
[2026-01-09 07:28:43] 2026-01-09 12:28:10,585 | INFO     | pgrp: 27897
[2026-01-09 07:28:43] 2026-01-09 12:28:10,585 | INFO     | corecount: 12
[2026-01-09 07:28:43] 2026-01-09 12:28:10,585 | INFO     | event service: False
[2026-01-09 07:28:43] 2026-01-09 12:28:10,586 | INFO     | sizes: {0: 2283971, 5: 2284233, 11: 2284289, 5551: 2310873, 5552: 2319871, 5556: 2319927, 5562: 2320249}
[2026-01-09 07:28:43] 2026-01-09 12:28:10,586 | INFO     | --------------------------------------------------
[2026-01-09 07:28:43] 2026-01-09 12:28:10,586 | INFO     | 
[2026-01-09 07:28:43] 2026-01-09 12:28:10,586 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 07:28:43] 2026-01-09 12:28:10,611 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 07:28:43] 2026-01-09 12:28:10,611 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 07:28:43] 2026-01-09 12:28:10,612 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 07:28:43] 2026-01-09 12:28:10,612 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 07:28:43] 2026-01-09 12:28:10,612 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 07:28:43] 2026-01-09 12:28:10,612 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 07:28:43] 2026-01-09 12:28:10,612 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 07:28:43] 2026-01-09 12:28:10,612 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 07:28:43] 2026-01-09 12:28:10,613 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 07:28:43] 2026-01-09 12:28:10,613 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 07:28:43] 2026-01-09 12:28:10,613 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 07:28:43] 2026-01-09 12:28:10,613 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 07:28:43] 2026-01-09 12:28:10,613 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 07:28:43] 2026-01-09 12:28:10,613 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 07:28:43] 2026-01-09 12:28:10,614 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 07:28:43] 2026-01-09 12:28:10,614 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 07:28:43] 2026-01-09 12:28:10,614 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 07:28:43] 2026-01-09 12:28:10,614 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 07:28:43] 2026-01-09 12:28:10,614 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 07:28:43] 2026-01-09 12:28:10,614 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 07:28:43] 2026-01-09 12:28:10,614 | INFO     | job 6963190173 has completed (purged errors)
[2026-01-09 07:28:43] 2026-01-09 12:28:10,615 | INFO     | overall cleanup function is called
[2026-01-09 07:28:43] 2026-01-09 12:28:11,618 | INFO     | --- collectZombieJob: --- 10, [27897]
[2026-01-09 07:28:43] 2026-01-09 12:28:11,618 | INFO     | zombie collector waiting for pid 27897
[2026-01-09 07:28:43] 2026-01-09 12:28:11,618 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 07:28:43] 2026-01-09 12:28:11,619 | INFO     | collected zombie processes
[2026-01-09 07:28:43] 2026-01-09 12:28:11,619 | INFO     | will attempt to kill all subprocesses of pid=27897
[2026-01-09 07:28:43] 2026-01-09 12:28:11,707 | INFO     | process IDs to be killed: [27897] (in reverse order)
[2026-01-09 07:28:43] 2026-01-09 12:28:11,756 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 07:28:43] 2026-01-09 12:28:11,756 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 07:28:43] 2026-01-09 12:28:11,760 | INFO     | did not find any defunct processes belonging to 27897
[2026-01-09 07:28:43] 2026-01-09 12:28:11,763 | INFO     | did not find any defunct processes belonging to 27897
[2026-01-09 07:28:43] 2026-01-09 12:28:11,764 | INFO     | ready for new job
[2026-01-09 07:28:43] 2026-01-09 12:28:11,764 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 07:28:43] 2026-01-09 12:28:11,765 | INFO     | ***************************************
[2026-01-09 07:28:43] 2026-01-09 12:28:11,766 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 07:28:43] 2026-01-09 12:28:11,766 | INFO     | ***************************************
[2026-01-09 07:28:43] 2026-01-09 12:28:11,766 | INFO     | 
[2026-01-09 07:28:43] 2026-01-09 12:28:11,766 | INFO     | architecture information:
[2026-01-09 07:28:43] 2026-01-09 12:28:11,767 | INFO     | executing command: cat /etc/os-release
[2026-01-09 07:28:43] 2026-01-09 12:28:11,781 | INFO     | cat /etc/os-release:
[2026-01-09 07:28:43] NAME="CentOS Linux"
[2026-01-09 07:28:43] VERSION="7 (Core)"
[2026-01-09 07:28:43] ID="centos"
[2026-01-09 07:28:43] ID_LIKE="rhel fedora"
[2026-01-09 07:28:43] VERSION_ID="7"
[2026-01-09 07:28:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 07:28:43] ANSI_COLOR="0;31"
[2026-01-09 07:28:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 07:28:43] HOME_URL="https://www.centos.org/"
[2026-01-09 07:28:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 07:28:43] 
[2026-01-09 07:28:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 07:28:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 07:28:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 07:28:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 07:28:43] 
[2026-01-09 07:28:43] 2026-01-09 12:28:11,781 | INFO     | ***************************************
[2026-01-09 07:28:43] 2026-01-09 12:28:12,283 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 07:28:43] 2026-01-09 12:28:12,300 | INFO     | sufficient remaining disk space (18648924160 B)
[2026-01-09 07:28:43] 2026-01-09 12:28:12,300 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 07:28:43] 2026-01-09 12:28:12,300 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 07:28:43] 2026-01-09 12:28:12,300 | INFO     | update_server=False
[2026-01-09 07:28:43] 2026-01-09 12:28:12,300 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 07:28:43] 2026-01-09 12:28:12,301 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 07:28:43] 2026-01-09 12:28:12,301 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 07:28:43] 2026-01-09 12:28:13,230 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 07:28:43] 2026-01-09 12:28:13,231 | INFO     | aborting loop
[2026-01-09 07:28:43] 2026-01-09 12:28:13,302 | INFO     | all data control threads have been joined
[2026-01-09 07:28:43] 2026-01-09 12:28:13,303 | INFO     | [job] queue monitor thread has finished
[2026-01-09 07:28:43] 2026-01-09 12:28:13,305 | INFO     | [job] retrieve thread has finished
[2026-01-09 07:28:43] 2026-01-09 12:28:13,496 | INFO     | all payload control threads have been joined
[2026-01-09 07:28:43] 2026-01-09 12:28:13,505 | INFO     | all job control threads have been joined
[2026-01-09 07:28:43] 2026-01-09 12:28:13,720 | INFO     | [payload] validate_post thread has finished
[2026-01-09 07:28:43] 2026-01-09 12:28:13,871 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 07:28:43] 2026-01-09 12:28:13,970 | INFO     | [data] copytool_in thread has finished
[2026-01-09 07:28:43] 2026-01-09 12:28:14,236 | INFO     | [job] job monitor thread has finished
[2026-01-09 07:28:43] 2026-01-09 12:28:14,307 | INFO     | [data] copytool_out thread has finished
[2026-01-09 07:28:43] 2026-01-09 12:28:14,308 | INFO     | [data] control thread has finished
[2026-01-09 07:28:43] 2026-01-09 12:28:14,499 | INFO     | [job] validate thread has finished
[2026-01-09 07:28:43] 2026-01-09 12:28:14,501 | INFO     | [payload] control thread has finished
[2026-01-09 07:28:43] 2026-01-09 12:28:14,511 | INFO     | [job] control thread has finished
[2026-01-09 07:28:43] 2026-01-09 12:28:14,582 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 07:28:43] 2026-01-09 12:28:14,726 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 07:28:43] 2026-01-09 12:28:14,740 | INFO     | [payload] failed_post thread has finished
[2026-01-09 07:28:43] 2026-01-09 12:28:14,792 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 07:28:43] 2026-01-09 12:28:18,732 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 07:28:43] 2026-01-09 12:28:20,383 | INFO     | [monitor] cgroup control has ended
[2026-01-09 07:28:43] 2026-01-09 12:28:22,607 | INFO     | job.realtimelogging is not enabled
[2026-01-09 07:28:43] 2026-01-09 12:28:23,613 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 07:28:43] 2026-01-09 12:28:24,040 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140515386210112)>', '<ExcThread(monitor, started 140514787571456)>']
[2026-01-09 07:28:43] 2026-01-09 12:28:29,063 | INFO     | all workflow threads have been joined
[2026-01-09 07:28:43] 2026-01-09 12:28:29,063 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 07:28:43] 2026-01-09 12:28:29,064 | INFO     | traces error code: 0
[2026-01-09 07:28:43] 2026-01-09 12:28:29,064 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 07:28:43] 2026-01-09 12:28:43,473 | INFO     | PID=21461 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 07:28:43] 2026-01-09 12:28:43,474 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 07:28:43] 2026-01-09 12:28:43,474 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 07:28:43] 2026-01-09 12:28:43,474 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 07:28:43] 2026-01-09 12:28:43,474 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 07:28:43] 2026-01-09 12:28:43,474 | INFO     | [monitor] control thread has ended
[2026-01-09 07:28:43] 2026-01-09 12:28:43,571 [wrapper] ==== pilot stdout END ====
[2026-01-09 07:28:43] 2026-01-09 12:28:43,575 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 07:28:43] 2026-01-09 12:28:43,579 [wrapper] pilotpid: 21461
[2026-01-09 07:28:43] 2026-01-09 12:28:43,583 [wrapper] Pilot exit status: 0
[2026-01-09 07:28:43] 2026-01-09 12:28:43,599 [wrapper] pandaids: 6963190173
[2026-01-09 07:28:43] 2026-01-09 12:28:43,635 [wrapper] cleanup supervisor_pilot  7123 21462
[2026-01-09 07:28:43] 2026-01-09 12:28:43,638 [wrapper] Test setup, not cleaning
[2026-01-09 07:28:43] 2026-01-09 12:28:43,642 [wrapper] apfmon messages muted
[2026-01-09 07:28:43] 2026-01-09 12:28:43,646 [wrapper] ==== wrapper stdout END ====
[2026-01-09 07:28:43] 2026-01-09 12:28:43,649 [wrapper] ==== wrapper stderr END ====
[2026-01-09 07:28:43]  *** Error codes and diagnostics ***
[2026-01-09 07:28:43]     "exeErrorCode": 0,
[2026-01-09 07:28:43]     "exeErrorDiag": "",
[2026-01-09 07:28:43]     "pilotErrorCode": 0,
[2026-01-09 07:28:43]     "pilotErrorDiag": "",
[2026-01-09 07:28:43]  *** Listing of results directory ***
[2026-01-09 07:28:43] total 442616
[2026-01-09 07:28:43] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-09 07:28:43] -rwx------ 1 boincer umatlas     36322 Jan  8 23:23 runpilot2-wrapper.sh
[2026-01-09 07:28:43] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 23:24 queuedata.json
[2026-01-09 07:28:43] -rw-r--r-- 1 boincer umatlas       100 Jan  9 05:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 07:28:43] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 05:54 run_atlas
[2026-01-09 07:28:43] -rw-r--r-- 1 boincer umatlas       105 Jan  9 05:54 job.xml
[2026-01-09 07:28:43] -rw-r--r-- 2 boincer umatlas 228156993 Jan  9 05:54 EVNT.47898824._001489.pool.root.1
[2026-01-09 07:28:43] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 05:54 start_atlas.sh
[2026-01-09 07:28:43] drwxrwx--x 2 boincer umatlas      4096 Jan  9 05:54 shared
[2026-01-09 07:28:43] -rw-r--r-- 2 boincer umatlas    592397 Jan  9 05:54 input.tar.gz
[2026-01-09 07:28:43] -rw-r--r-- 1 boincer umatlas         0 Jan  9 05:54 boinc_lockfile
[2026-01-09 07:28:43] -rw-r--r-- 1 boincer umatlas      2520 Jan  9 05:54 pandaJob.out
[2026-01-09 07:28:43] -rw------- 1 boincer umatlas        57 Jan  9 05:54 setup.sh.local
[2026-01-09 07:28:43] -rw------- 1 boincer umatlas    989369 Jan  9 05:55 agis_schedconf.cvmfs.json
[2026-01-09 07:28:43] -rw------- 1 boincer umatlas   1516240 Jan  9 05:55 agis_ddmendpoints.agis.ALL.json
[2026-01-09 07:28:43] drwx------ 5 boincer umatlas      4096 Jan  9 05:55 pilot3
[2026-01-09 07:28:43] -rw-r--r-- 1 boincer umatlas      5952 Jan  9 07:22 init_data.xml
[2026-01-09 07:28:43] -rw------- 1 boincer umatlas 218789249 Jan  9 07:27 HITS.47898826._038758.pool.root.1
[2026-01-09 07:28:43] -rw-r--r-- 1 boincer umatlas       530 Jan  9 07:27 boinc_task_state.xml
[2026-01-09 07:28:43] -rw------- 1 boincer umatlas      1046 Jan  9 07:27 memory_monitor_summary.json
[2026-01-09 07:28:43] -rw------- 1 boincer umatlas    393166 Jan  9 07:28 log.47898826._038758.job.log.tgz.1
[2026-01-09 07:28:43] -rw------- 1 boincer umatlas      7848 Jan  9 07:28 heartbeat.json
[2026-01-09 07:28:43] -rw-r--r-- 1 boincer umatlas        27 Jan  9 07:28 wrapper_checkpoint.txt
[2026-01-09 07:28:43] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 07:28 boinc_mmap_file
[2026-01-09 07:28:43] -rw------- 1 boincer umatlas        95 Jan  9 07:28 pilot_heartbeat.json
[2026-01-09 07:28:43] -rw------- 1 boincer umatlas       745 Jan  9 07:28 pilotlog.txt
[2026-01-09 07:28:43] -rw------- 1 boincer umatlas    799263 Jan  9 07:28 log.47898826._038758.job.log.1
[2026-01-09 07:28:43] -rw------- 1 boincer umatlas       357 Jan  9 07:28 output.list
[2026-01-09 07:28:43] -rw-r--r-- 1 boincer umatlas       620 Jan  9 07:28 runtime_log
[2026-01-09 07:28:43] -rw------- 1 boincer umatlas   1208320 Jan  9 07:28 result.tar.gz
[2026-01-09 07:28:43] -rw-r--r-- 1 boincer umatlas      9344 Jan  9 07:28 runtime_log.err
[2026-01-09 07:28:43] -rw------- 1 boincer umatlas       659 Jan  9 07:28 neULDmrCJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmlCmKDms1SC5m.diag
[2026-01-09 07:28:43] -rw-r--r-- 1 boincer umatlas     22417 Jan  9 07:28 stderr.txt
[2026-01-09 07:28:43] HITS file was successfully produced:
[2026-01-09 07:28:43] -rw------- 1 boincer umatlas 218789249 Jan  9 07:27 shared/HITS.pool.root.1
[2026-01-09 07:28:43]  *** Contents of shared directory: ***
[2026-01-09 07:28:43] total 438256
[2026-01-09 07:28:43] -rw-r--r-- 2 boincer umatlas 228156993 Jan  9 05:54 ATLAS.root_0
[2026-01-09 07:28:43] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 05:54 start_atlas.sh
[2026-01-09 07:28:43] -rw-r--r-- 2 boincer umatlas    592397 Jan  9 05:54 input.tar.gz
[2026-01-09 07:28:43] -rw------- 1 boincer umatlas 218789249 Jan  9 07:27 HITS.pool.root.1
[2026-01-09 07:28:43] -rw------- 1 boincer umatlas   1208320 Jan  9 07:28 result.tar.gz
07:28:45 (17646): run_atlas exited; CPU time 60329.023215
07:28:45 (17646): called boinc_finish(0)

</stderr_txt>
]]>

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