Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:50:32 (10581): wrapper (7.7.26015): starting
14:50:32 (10581): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 14:50:32] Arguments: --nthreads 8
[2026-01-09 14:50:32] Threads: 8
[2026-01-09 14:50:32] Checking for CVMFS
[2026-01-09 14:50:32] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 14:50:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 14:50:32] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 14:50:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 14:50:32] 2.11.2.0 17366 35480 92952 154945 2 57 15920788 25165825 0 130560 0 16352443 99.823 10707932 3887 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 14:50:32] CVMFS is ok
[2026-01-09 14:50:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 14:50:32] Checking for apptainer binary...
[2026-01-09 14:50:32] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 14:50:32] Running /usr/bin/apptainer --version
[2026-01-09 14:50:32] apptainer version 1.3.2-1.el7
[2026-01-09 14:50:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 14:50:34] cg-vwn463.simple-grid.lan
[2026-01-09 14:50:34] apptainer works
[2026-01-09 14:50:34] Set ATHENA_PROC_NUMBER=8
[2026-01-09 14:50:34] Set ATHENA_CORE_NUMBER=8
[2026-01-09 14:50:34] Starting ATLAS job with PandaID=6963161487
[2026-01-09 14:50:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 17:28:10]  *** The last 200 lines of the pilot log: ***
[2026-01-09 17:28:10] 2026-01-09 16:27:20,722 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 17:28:10] 2026-01-09 16:27:20,977 | INFO     | time since job start (9392s) is within the limit (349056.0s)
[2026-01-09 17:28:10] 2026-01-09 16:27:22,007 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 17:28:10] 2026-01-09 16:27:22,008 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2250.0
[2026-01-09 17:28:10] 2026-01-09 16:27:22,010 | INFO     | using path: /var/lib/boinc/slots/14/PanDA_Pilot-6963161487/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 17:28:10] 2026-01-09 16:27:22,011 | INFO     | extracted standard info from prmon json
[2026-01-09 17:28:10] 2026-01-09 16:27:22,011 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 17:28:10] 2026-01-09 16:27:22,011 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 17:28:10] 2026-01-09 16:27:22,011 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 17:28:10] 2026-01-09 16:27:22,011 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 17:28:10] 2026-01-09 16:27:22,015 | INFO     | fitting pss+swap vs Time
[2026-01-09 17:28:10] 2026-01-09 16:27:22,015 | INFO     | sum of square deviations: 1132458442.5
[2026-01-09 17:28:10] 2026-01-09 16:27:22,016 | INFO     | sum of deviations: -2511972802.0
[2026-01-09 17:28:10] 2026-01-09 16:27:22,016 | INFO     | mean x: 1767971345.5
[2026-01-09 17:28:10] 2026-01-09 16:27:22,016 | INFO     | mean y: 2489988.7662337665
[2026-01-09 17:28:10] 2026-01-09 16:27:22,016 | INFO     | intersect: 3924131408.8321586
[2026-01-09 17:28:10] 2026-01-09 16:27:22,017 | INFO     | chi2: 2.356860400606133
[2026-01-09 17:28:10] 2026-01-09 16:27:22,017 | INFO     | sum of square deviations: 1025693650.0
[2026-01-09 17:28:10] 2026-01-09 16:27:22,018 | INFO     | sum of deviations: 7631211020.000001
[2026-01-09 17:28:10] 2026-01-09 16:27:22,018 | INFO     | mean x: 1767971193.0
[2026-01-09 17:28:10] 2026-01-09 16:27:22,018 | INFO     | mean y: 2504094.865771812
[2026-01-09 17:28:10] 2026-01-09 16:27:22,018 | INFO     | intersect: -13151288220.280323
[2026-01-09 17:28:10] 2026-01-09 16:27:22,019 | INFO     | chi2: 1.5939555945862125
[2026-01-09 17:28:10] 2026-01-09 16:27:22,019 | INFO     | current chi2=1.5939555945862125 (change=32.369537280346265 %)
[2026-01-09 17:28:10] 2026-01-09 16:27:22,019 | INFO     | sum of square deviations: 925859220.0
[2026-01-09 17:28:10] 2026-01-09 16:27:22,020 | INFO     | sum of deviations: 7431760021.499997
[2026-01-09 17:28:10] 2026-01-09 16:27:22,020 | INFO     | mean x: 1767971040.5
[2026-01-09 17:28:10] 2026-01-09 16:27:22,020 | INFO     | mean y: 2503790.2430555555
[2026-01-09 17:28:10] 2026-01-09 16:27:22,020 | INFO     | intersect: -14188786002.126947
[2026-01-09 17:28:10] 2026-01-09 16:27:22,021 | INFO     | chi2: 1.5955013724671339
[2026-01-09 17:28:10] 2026-01-09 16:27:22,021 | INFO     | current chi2=1.5955013724671339 (change=-0.09697747454016387 %)
[2026-01-09 17:28:10] 2026-01-09 16:27:22,021 | INFO     | right removable region: 143
[2026-01-09 17:28:10] 2026-01-09 16:27:22,021 | INFO     | sum of square deviations: 1025693650.0
[2026-01-09 17:28:10] 2026-01-09 16:27:22,022 | INFO     | sum of deviations: -25034547253.999992
[2026-01-09 17:28:10] 2026-01-09 16:27:22,022 | INFO     | mean x: 1767971498.0
[2026-01-09 17:28:10] 2026-01-09 16:27:22,022 | INFO     | mean y: 2521655.644295302
[2026-01-09 17:28:10] 2026-01-09 16:27:22,023 | INFO     | intersect: 43154164458.93761
[2026-01-09 17:28:10] 2026-01-09 16:27:22,023 | INFO     | chi2: 0.9259943834424231
[2026-01-09 17:28:10] 2026-01-09 16:27:22,023 | INFO     | current chi2=0.9259943834424231 (change=60.71068175254344 %)
[2026-01-09 17:28:10] 2026-01-09 16:27:22,023 | INFO     | sum of square deviations: 925859220.0
[2026-01-09 17:28:10] 2026-01-09 16:27:22,024 | INFO     | sum of deviations: -23438079989.5
[2026-01-09 17:28:10] 2026-01-09 16:27:22,024 | INFO     | mean x: 1767971650.5
[2026-01-09 17:28:10] 2026-01-09 16:27:22,025 | INFO     | mean y: 2519129.826388889
[2026-01-09 17:28:10] 2026-01-09 16:27:22,025 | INFO     | intersect: 44758633308.380806
[2026-01-09 17:28:10] 2026-01-09 16:27:22,025 | INFO     | chi2: 0.9108436032702774
[2026-01-09 17:28:10] 2026-01-09 16:27:22,025 | INFO     | current chi2=0.9108436032702774 (change=1.6361632903022703 %)
[2026-01-09 17:28:10] 2026-01-09 16:27:22,025 | INFO     | left removable region: 20
[2026-01-09 17:28:10] 2026-01-09 16:27:22,025 | INFO     | sum of square deviations: 576985702.0
[2026-01-09 17:28:10] 2026-01-09 16:27:22,026 | INFO     | sum of deviations: -3290397584.0000005
[2026-01-09 17:28:10] 2026-01-09 16:27:22,026 | INFO     | mean x: 1767971620.0
[2026-01-09 17:28:10] 2026-01-09 16:27:22,026 | INFO     | mean y: 2517349.886178862
[2026-01-09 17:28:10] 2026-01-09 16:27:22,027 | INFO     | intersect: 10084794132.246666
[2026-01-09 17:28:10] 2026-01-09 16:27:22,027 | INFO     | chi2: 0.058037040762862646
[2026-01-09 17:28:10] 2026-01-09 16:27:22,027 | INFO     | current memory leak: -5.70 B/s (using 123 data points, chi2=0.06)
[2026-01-09 17:28:10] 2026-01-09 16:27:22,027 | INFO     | could have reported an average CPU frequency of 2250 MHz (8 samples)
[2026-01-09 17:28:10] 2026-01-09 16:27:22,028 | INFO     | ..............................
[2026-01-09 17:28:10] 2026-01-09 16:27:22,028 | INFO     | . Timing measurements:
[2026-01-09 17:28:10] 2026-01-09 16:27:22,028 | INFO     | . get job = 0 s
[2026-01-09 17:28:10] 2026-01-09 16:27:22,028 | INFO     | . initial setup = 1 s
[2026-01-09 17:28:10] 2026-01-09 16:27:22,028 | INFO     | . payload setup = 7 s
[2026-01-09 17:28:10] 2026-01-09 16:27:22,028 | INFO     | . stage-in = 0 s
[2026-01-09 17:28:10] 2026-01-09 16:27:22,028 | INFO     | . payload execution = 9356 s
[2026-01-09 17:28:10] 2026-01-09 16:27:22,028 | INFO     | . stage-out = 0 s
[2026-01-09 17:28:10] 2026-01-09 16:27:22,029 | INFO     | . log creation = 0 s
[2026-01-09 17:28:10] 2026-01-09 16:27:22,029 | INFO     | ..............................
[2026-01-09 17:28:10] 2026-01-09 16:27:22,637 | INFO     | 
[2026-01-09 17:28:10] 2026-01-09 16:27:22,637 | INFO     | job summary report
[2026-01-09 17:28:10] 2026-01-09 16:27:22,637 | INFO     | --------------------------------------------------
[2026-01-09 17:28:10] 2026-01-09 16:27:22,637 | INFO     | PanDA job id: 6963161487
[2026-01-09 17:28:10] 2026-01-09 16:27:22,638 | INFO     | task id: 47898826
[2026-01-09 17:28:10] 2026-01-09 16:27:22,638 | INFO     | errors: (none)
[2026-01-09 17:28:10] 2026-01-09 16:27:22,638 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 17:28:10] 2026-01-09 16:27:22,638 | INFO     | pilot state: finished 
[2026-01-09 17:28:10] 2026-01-09 16:27:22,638 | INFO     | transexitcode: 0
[2026-01-09 17:28:10] 2026-01-09 16:27:22,638 | INFO     | exeerrorcode: 0
[2026-01-09 17:28:10] 2026-01-09 16:27:22,638 | INFO     | exeerrordiag: 
[2026-01-09 17:28:10] 2026-01-09 16:27:22,638 | INFO     | exitcode: 0
[2026-01-09 17:28:10] 2026-01-09 16:27:22,638 | INFO     | exitmsg: OK
[2026-01-09 17:28:10] 2026-01-09 16:27:22,639 | INFO     | cpuconsumptiontime: 70982 s
[2026-01-09 17:28:10] 2026-01-09 16:27:22,639 | INFO     | nevents: 400
[2026-01-09 17:28:10] 2026-01-09 16:27:22,639 | INFO     | neventsw: 0
[2026-01-09 17:28:10] 2026-01-09 16:27:22,639 | INFO     | pid: 20803
[2026-01-09 17:28:10] 2026-01-09 16:27:22,639 | INFO     | pgrp: 20803
[2026-01-09 17:28:10] 2026-01-09 16:27:22,639 | INFO     | corecount: 8
[2026-01-09 17:28:10] 2026-01-09 16:27:22,639 | INFO     | event service: False
[2026-01-09 17:28:10] 2026-01-09 16:27:22,639 | INFO     | sizes: {0: 2283795, 1: 2283994, 6: 2284256, 12: 2284284, 9367: 2312218, 9368: 2312217, 9369: 2321401, 9372: 2321485, 9378: 2321679}
[2026-01-09 17:28:10] 2026-01-09 16:27:22,639 | INFO     | --------------------------------------------------
[2026-01-09 17:28:10] 2026-01-09 16:27:22,639 | INFO     | 
[2026-01-09 17:28:10] 2026-01-09 16:27:22,640 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2026-01-09 17:28:10] 2026-01-09 16:27:22,663 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 17:28:10] 2026-01-09 16:27:22,663 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 17:28:10] 2026-01-09 16:27:22,663 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 17:28:10] 2026-01-09 16:27:22,663 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 17:28:10] 2026-01-09 16:27:22,663 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 17:28:10] 2026-01-09 16:27:22,663 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 17:28:10] 2026-01-09 16:27:22,663 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 17:28:10] 2026-01-09 16:27:22,663 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 17:28:10] 2026-01-09 16:27:22,664 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 17:28:10] 2026-01-09 16:27:22,664 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 17:28:10] 2026-01-09 16:27:22,664 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 17:28:10] 2026-01-09 16:27:22,664 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 17:28:10] 2026-01-09 16:27:22,664 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 17:28:10] 2026-01-09 16:27:22,664 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 17:28:10] 2026-01-09 16:27:22,664 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 17:28:10] 2026-01-09 16:27:22,664 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 17:28:10] 2026-01-09 16:27:22,664 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 17:28:10] 2026-01-09 16:27:22,664 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 17:28:10] 2026-01-09 16:27:22,665 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 17:28:10] 2026-01-09 16:27:22,665 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 17:28:10] 2026-01-09 16:27:22,665 | INFO     | job 6963161487 has completed (purged errors)
[2026-01-09 17:28:10] 2026-01-09 16:27:22,665 | INFO     | overall cleanup function is called
[2026-01-09 17:28:10] 2026-01-09 16:27:23,673 | INFO     | --- collectZombieJob: --- 10, [20803]
[2026-01-09 17:28:10] 2026-01-09 16:27:23,673 | INFO     | zombie collector waiting for pid 20803
[2026-01-09 17:28:10] 2026-01-09 16:27:23,673 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 17:28:10] 2026-01-09 16:27:23,673 | INFO     | collected zombie processes
[2026-01-09 17:28:10] 2026-01-09 16:27:23,673 | INFO     | will attempt to kill all subprocesses of pid=20803
[2026-01-09 17:28:10] 2026-01-09 16:27:23,731 | INFO     | process IDs to be killed: [20803] (in reverse order)
[2026-01-09 17:28:10] 2026-01-09 16:27:23,774 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 17:28:10] 2026-01-09 16:27:23,774 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 17:28:10] 2026-01-09 16:27:23,776 | INFO     | did not find any defunct processes belonging to 20803
[2026-01-09 17:28:10] 2026-01-09 16:27:23,778 | INFO     | did not find any defunct processes belonging to 20803
[2026-01-09 17:28:10] 2026-01-09 16:27:23,778 | INFO     | ready for new job
[2026-01-09 17:28:10] 2026-01-09 16:27:23,778 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 17:28:10] 2026-01-09 16:27:23,780 | INFO     | ***************************************
[2026-01-09 17:28:10] 2026-01-09 16:27:23,780 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 17:28:10] 2026-01-09 16:27:23,781 | INFO     | ***************************************
[2026-01-09 17:28:10] 2026-01-09 16:27:23,781 | INFO     | 
[2026-01-09 17:28:10] 2026-01-09 16:27:23,781 | INFO     | pilot is running in a VM
[2026-01-09 17:28:10] 2026-01-09 16:27:23,781 | INFO     | architecture information:
[2026-01-09 17:28:10] 2026-01-09 16:27:23,782 | INFO     | executing command: cat /etc/os-release
[2026-01-09 17:28:10] 2026-01-09 16:27:23,799 | INFO     | cat /etc/os-release:
[2026-01-09 17:28:10] NAME="CentOS Linux"
[2026-01-09 17:28:10] VERSION="7 (Core)"
[2026-01-09 17:28:10] ID="centos"
[2026-01-09 17:28:10] ID_LIKE="rhel fedora"
[2026-01-09 17:28:10] VERSION_ID="7"
[2026-01-09 17:28:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 17:28:10] ANSI_COLOR="0;31"
[2026-01-09 17:28:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 17:28:10] HOME_URL="https://www.centos.org/"
[2026-01-09 17:28:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 17:28:10] 
[2026-01-09 17:28:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 17:28:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 17:28:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 17:28:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 17:28:10] 
[2026-01-09 17:28:10] 2026-01-09 16:27:23,799 | INFO     | ***************************************
[2026-01-09 17:28:10] 2026-01-09 16:27:24,302 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2026-01-09 17:28:10] 2026-01-09 16:27:24,321 | INFO     | sufficient remaining disk space (498266537984 B)
[2026-01-09 17:28:10] 2026-01-09 16:27:24,321 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 17:28:10] 2026-01-09 16:27:24,321 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 17:28:10] 2026-01-09 16:27:24,321 | INFO     | update_server=False
[2026-01-09 17:28:10] 2026-01-09 16:27:24,321 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 17:28:10] 2026-01-09 16:27:24,322 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 17:28:10] 2026-01-09 16:27:24,322 | INFO     | aborting loop
[2026-01-09 17:28:10] 2026-01-09 16:27:24,510 | INFO     | all data control threads have been joined
[2026-01-09 17:28:10] 2026-01-09 16:27:25,327 | INFO     | [job] retrieve thread has finished
[2026-01-09 17:28:10] 2026-01-09 16:27:25,328 | INFO     | [job] job monitor thread has finished
[2026-01-09 17:28:10] 2026-01-09 16:27:25,389 | INFO     | all job control threads have been joined
[2026-01-09 17:28:10] 2026-01-09 16:27:25,444 | INFO     | [payload] validate_post thread has finished
[2026-01-09 17:28:10] 2026-01-09 16:27:25,477 | INFO     | [data] copytool_in thread has finished
[2026-01-09 17:28:10] 2026-01-09 16:27:25,516 | INFO     | [data] control thread has finished
[2026-01-09 17:28:10] 2026-01-09 16:27:25,633 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 17:28:10] 2026-01-09 16:27:25,689 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 17:28:10] 2026-01-09 16:27:25,790 | INFO     | all payload control threads have been joined
[2026-01-09 17:28:10] 2026-01-09 16:27:25,876 | INFO     | [job] validate thread has finished
[2026-01-09 17:28:10] 2026-01-09 16:27:26,048 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 17:28:10] 2026-01-09 16:27:26,115 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 17:28:10] 2026-01-09 16:27:26,395 | INFO     | [job] control thread has finished
[2026-01-09 17:28:10] 2026-01-09 16:27:26,618 | INFO     | [payload] failed_post thread has finished
[2026-01-09 17:28:10] 2026-01-09 16:27:26,647 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 17:28:10] 2026-01-09 16:27:26,661 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 17:28:10] 2026-01-09 16:27:26,795 | INFO     | [payload] control thread has finished
[2026-01-09 17:28:10] 2026-01-09 16:27:27,148 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 17:28:10] 2026-01-09 16:27:27,695 | INFO     | [data] copytool_out thread has finished
[2026-01-09 17:28:10] 2026-01-09 16:27:28,154 | INFO     | [job] queue monitor thread has finished
[2026-01-09 17:28:10] 2026-01-09 16:27:30,118 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 17:28:10] 2026-01-09 16:27:54,059 | INFO     | PID=14312 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 17:28:10] 2026-01-09 16:27:54,060 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 17:28:10] 2026-01-09 16:27:54,060 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 17:28:10] 2026-01-09 16:27:54,060 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 17:28:10] 2026-01-09 16:28:03,264 | INFO     | [monitor] cgroup control has ended
[2026-01-09 17:28:10] 2026-01-09 16:28:05,169 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140621320841024)>', '<ExcThread(monitor, started 140621012510464)>']
[2026-01-09 17:28:10] 2026-01-09 16:28:06,122 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 17:28:10] 2026-01-09 16:28:06,122 | INFO     | [monitor] control thread has ended
[2026-01-09 17:28:10] 2026-01-09 16:28:10,192 | INFO     | all workflow threads have been joined
[2026-01-09 17:28:10] 2026-01-09 16:28:10,192 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 17:28:10] 2026-01-09 16:28:10,193 | INFO     | traces error code: 0
[2026-01-09 17:28:10] 2026-01-09 16:28:10,193 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 17:28:10] 2026-01-09 16:28:10,341 [wrapper] ==== pilot stdout END ====
[2026-01-09 17:28:10] 2026-01-09 16:28:10,347 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 17:28:10] 2026-01-09 16:28:10,353 [wrapper] pilotpid: 14312
[2026-01-09 17:28:10] 2026-01-09 16:28:10,357 [wrapper] Pilot exit status: 0
[2026-01-09 17:28:10] 2026-01-09 16:28:10,377 [wrapper] pandaids: 6963161487
[2026-01-09 17:28:10] 2026-01-09 16:28:10,417 [wrapper] cleanup supervisor_pilot  4870 14313
[2026-01-09 17:28:10] 2026-01-09 16:28:10,422 [wrapper] Test setup, not cleaning
[2026-01-09 17:28:10] 2026-01-09 16:28:10,425 [wrapper] apfmon messages muted
[2026-01-09 17:28:10] 2026-01-09 16:28:10,428 [wrapper] ==== wrapper stdout END ====
[2026-01-09 17:28:10] 2026-01-09 16:28:10,431 [wrapper] ==== wrapper stderr END ====
[2026-01-09 17:28:10]  *** Error codes and diagnostics ***
[2026-01-09 17:28:10]     "exeErrorCode": 0,
[2026-01-09 17:28:10]     "exeErrorDiag": "",
[2026-01-09 17:28:10]     "pilotErrorCode": 0,
[2026-01-09 17:28:10]     "pilotErrorDiag": "",
[2026-01-09 17:28:10]  *** Listing of results directory ***
[2026-01-09 17:28:10] total 449180
[2026-01-09 17:28:10] -rw-r--r--. 1 boinc boinc    579449 Jan  8 22:44 pilot3.tar.gz
[2026-01-09 17:28:10] -rwx------. 1 boinc boinc     36322 Jan  8 22:46 runpilot2-wrapper.sh
[2026-01-09 17:28:10] -rw-r--r--. 1 boinc boinc      5112 Jan  8 22:47 queuedata.json
[2026-01-09 17:28:10] -rw-r--r--. 1 boinc boinc       100 Jan  9 14:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 17:28:10] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 14:50 run_atlas
[2026-01-09 17:28:10] -rw-r--r--. 1 boinc boinc       105 Jan  9 14:50 job.xml
[2026-01-09 17:28:10] -rw-r--r--. 1 boinc boinc      6390 Jan  9 14:50 init_data.xml
[2026-01-09 17:28:10] -rw-r--r--. 2 boinc boinc 227261474 Jan  9 14:50 EVNT.47898824._001282.pool.root.1
[2026-01-09 17:28:10] -rw-r--r--. 2 boinc boinc     15847 Jan  9 14:50 start_atlas.sh
[2026-01-09 17:28:10] drwxrwx--x. 2 boinc boinc        68 Jan  9 14:50 shared
[2026-01-09 17:28:10] -rw-r--r--. 2 boinc boinc    592399 Jan  9 14:50 input.tar.gz
[2026-01-09 17:28:10] -rw-r--r--. 1 boinc boinc         0 Jan  9 14:50 boinc_lockfile
[2026-01-09 17:28:10] -rw-r--r--. 1 boinc boinc      2517 Jan  9 14:50 pandaJob.out
[2026-01-09 17:28:10] -rw-------. 1 boinc boinc    989377 Jan  9 14:50 agis_schedconf.cvmfs.json
[2026-01-09 17:28:10] -rw-------. 1 boinc boinc   1516240 Jan  9 14:50 agis_ddmendpoints.agis.ALL.json
[2026-01-09 17:28:10] drwx------. 5 boinc boinc      4096 Jan  9 14:50 pilot3
[2026-01-09 17:28:10] -rw-------. 1 boinc boinc 225535021 Jan  9 17:26 HITS.47898826._033149.pool.root.1
[2026-01-09 17:28:10] -rw-r--r--. 1 boinc boinc       530 Jan  9 17:26 boinc_task_state.xml
[2026-01-09 17:28:10] -rw-------. 1 boinc boinc      1027 Jan  9 17:27 memory_monitor_summary.json
[2026-01-09 17:28:10] -rw-------. 1 boinc boinc    371543 Jan  9 17:27 log.47898826._033149.job.log.tgz.1
[2026-01-09 17:28:10] -rw-------. 1 boinc boinc      7760 Jan  9 17:27 heartbeat.json
[2026-01-09 17:28:10] -rw-r--r--. 1 boinc boinc      8192 Jan  9 17:27 boinc_mmap_file
[2026-01-09 17:28:10] -rw-r--r--. 1 boinc boinc        27 Jan  9 17:27 wrapper_checkpoint.txt
[2026-01-09 17:28:10] -rw-------. 1 boinc boinc        95 Jan  9 17:27 pilot_heartbeat.json
[2026-01-09 17:28:10] -rw-------. 1 boinc boinc      4810 Jan  9 17:28 pilotlog.txt
[2026-01-09 17:28:10] -rw-------. 1 boinc boinc   1262235 Jan  9 17:28 log.47898826._033149.job.log.1
[2026-01-09 17:28:10] -rw-------. 1 boinc boinc       357 Jan  9 17:28 output.list
[2026-01-09 17:28:10] -rw-r--r--. 1 boinc boinc       620 Jan  9 17:28 runtime_log
[2026-01-09 17:28:10] -rw-------. 1 boinc boinc   1648640 Jan  9 17:28 result.tar.gz
[2026-01-09 17:28:10] -rw-r--r--. 1 boinc boinc      8832 Jan  9 17:28 runtime_log.err
[2026-01-09 17:28:10] -rw-------. 1 boinc boinc       652 Jan  9 17:28 HKyNDmF1Cy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmKIgKDmDxm2nm.diag
[2026-01-09 17:28:10] -rw-r--r--. 1 boinc boinc     20783 Jan  9 17:28 stderr.txt
[2026-01-09 17:28:10] HITS file was successfully produced:
[2026-01-09 17:28:10] -rw-------. 1 boinc boinc 225535021 Jan  9 17:26 shared/HITS.pool.root.1
[2026-01-09 17:28:10]  *** Contents of shared directory: ***
[2026-01-09 17:28:10] total 444396
[2026-01-09 17:28:10] -rw-r--r--. 2 boinc boinc 227261474 Jan  9 14:50 ATLAS.root_0
[2026-01-09 17:28:10] -rw-r--r--. 2 boinc boinc     15847 Jan  9 14:50 start_atlas.sh
[2026-01-09 17:28:10] -rw-r--r--. 2 boinc boinc    592399 Jan  9 14:50 input.tar.gz
[2026-01-09 17:28:10] -rw-------. 1 boinc boinc 225535021 Jan  9 17:26 HITS.pool.root.1
[2026-01-09 17:28:10] -rw-------. 1 boinc boinc   1648640 Jan  9 17:28 result.tar.gz
17:28:11 (10581): run_atlas exited; CPU time 71040.417200
17:28:11 (10581): called boinc_finish(0)

</stderr_txt>
]]>

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