Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:35:39 (6288): wrapper (7.7.26015): starting
14:35:39 (6288): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 14:35:39] Arguments: --nthreads 8
[2026-01-09 14:35:39] Threads: 8
[2026-01-09 14:35:39] Checking for CVMFS
[2026-01-09 14:35:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 14:35:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 14:35:39] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 14:35:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 14:35:39] 2.11.2.0 12981 35481 101800 154945 1 56 15392111 25165825 0 130560 0 15545269 99.812 10973255 3903 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 14:35:39] CVMFS is ok
[2026-01-09 14:35:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 14:35:39] Checking for apptainer binary...
[2026-01-09 14:35:39] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 14:35:39] Running /usr/bin/apptainer --version
[2026-01-09 14:35:39] apptainer version 1.3.2-1.el7
[2026-01-09 14:35:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 14:35:41] cg-vwn366.simple-grid.lan
[2026-01-09 14:35:41] apptainer works
[2026-01-09 14:35:41] Set ATHENA_PROC_NUMBER=8
[2026-01-09 14:35:41] Set ATHENA_CORE_NUMBER=8
[2026-01-09 14:35:41] Starting ATLAS job with PandaID=6963192139
[2026-01-09 14:35:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 17:25:16]  *** The last 200 lines of the pilot log: ***
[2026-01-09 17:25:16] 2026-01-09 16:24:27,011 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 17:25:16] 2026-01-09 16:24:27,012 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 17:25:16] 2026-01-09 16:24:27,014 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6963192139/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 17:25:16] 2026-01-09 16:24:27,015 | INFO     | extracted standard info from prmon json
[2026-01-09 17:25:16] 2026-01-09 16:24:27,015 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 17:25:16] 2026-01-09 16:24:27,015 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 17:25:16] 2026-01-09 16:24:27,016 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 17:25:16] 2026-01-09 16:24:27,016 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 17:25:16] 2026-01-09 16:24:27,020 | INFO     | fitting pss+swap vs Time
[2026-01-09 17:25:16] 2026-01-09 16:24:27,020 | INFO     | sum of square deviations: 1418361477.5
[2026-01-09 17:25:16] 2026-01-09 16:24:27,021 | INFO     | sum of deviations: -13990817870.000004
[2026-01-09 17:25:16] 2026-01-09 16:24:27,021 | INFO     | mean x: 1767970814.5
[2026-01-09 17:25:16] 2026-01-09 16:24:27,022 | INFO     | mean y: 2508334.108433735
[2026-01-09 17:25:16] 2026-01-09 16:24:27,022 | INFO     | intersect: 17441897416.18047
[2026-01-09 17:25:16] 2026-01-09 16:24:27,022 | INFO     | chi2: 2.4026632889335096
[2026-01-09 17:25:16] 2026-01-09 16:24:27,022 | INFO     | sum of square deviations: 1294014960.0
[2026-01-09 17:25:16] 2026-01-09 16:24:27,023 | INFO     | sum of deviations: -2511377381.0000014
[2026-01-09 17:25:16] 2026-01-09 16:24:27,024 | INFO     | mean x: 1767970662.0
[2026-01-09 17:25:16] 2026-01-09 16:24:27,024 | INFO     | mean y: 2522085.2422360247
[2026-01-09 17:25:16] 2026-01-09 16:24:27,024 | INFO     | intersect: 3433735531.815063
[2026-01-09 17:25:16] 2026-01-09 16:24:27,024 | INFO     | chi2: 1.6395628648314204
[2026-01-09 17:25:16] 2026-01-09 16:24:27,024 | INFO     | current chi2=1.6395628648314204 (change=31.76060614139624 %)
[2026-01-09 17:25:16] 2026-01-09 16:24:27,025 | INFO     | sum of square deviations: 1177156955.0
[2026-01-09 17:25:16] 2026-01-09 16:24:27,026 | INFO     | sum of deviations: -2176169022.0000167
[2026-01-09 17:25:16] 2026-01-09 16:24:27,026 | INFO     | mean x: 1767970509.5
[2026-01-09 17:25:16] 2026-01-09 16:24:27,026 | INFO     | mean y: 2522522.7564102565
[2026-01-09 17:25:16] 2026-01-09 16:24:27,026 | INFO     | intersect: 3270907964.682025
[2026-01-09 17:25:16] 2026-01-09 16:24:27,026 | INFO     | chi2: 1.6398909664880486
[2026-01-09 17:25:16] 2026-01-09 16:24:27,027 | INFO     | current chi2=1.6398909664880486 (change=-0.02001153256553207 %)
[2026-01-09 17:25:16] 2026-01-09 16:24:27,027 | INFO     | right removable region: 155
[2026-01-09 17:25:16] 2026-01-09 16:24:27,027 | INFO     | sum of square deviations: 1294014960.0
[2026-01-09 17:25:16] 2026-01-09 16:24:27,028 | INFO     | sum of deviations: -38282932172.0
[2026-01-09 17:25:16] 2026-01-09 16:24:27,028 | INFO     | mean x: 1767970967.0
[2026-01-09 17:25:16] 2026-01-09 16:24:27,028 | INFO     | mean y: 2537698.105590062
[2026-01-09 17:25:16] 2026-01-09 16:24:27,028 | INFO     | intersect: 52307275049.616776
[2026-01-09 17:25:16] 2026-01-09 16:24:27,029 | INFO     | chi2: 0.9793976059820817
[2026-01-09 17:25:16] 2026-01-09 16:24:27,029 | INFO     | current chi2=0.9793976059820817 (change=59.23700126883716 %)
[2026-01-09 17:25:16] 2026-01-09 16:24:27,029 | INFO     | sum of square deviations: 1177156955.0
[2026-01-09 17:25:16] 2026-01-09 16:24:27,030 | INFO     | sum of deviations: -39889092824.5
[2026-01-09 17:25:16] 2026-01-09 16:24:27,030 | INFO     | mean x: 1767971119.5
[2026-01-09 17:25:16] 2026-01-09 16:24:27,031 | INFO     | mean y: 2539750.7243589745
[2026-01-09 17:25:16] 2026-01-09 16:24:27,031 | INFO     | intersect: 59911937386.463326
[2026-01-09 17:25:16] 2026-01-09 16:24:27,031 | INFO     | chi2: 0.9457876321620272
[2026-01-09 17:25:16] 2026-01-09 16:24:27,031 | INFO     | current chi2=0.9457876321620272 (change=3.4316985884759643 %)
[2026-01-09 17:25:16] 2026-01-09 16:24:27,031 | INFO     | left removable region: 20
[2026-01-09 17:25:16] 2026-01-09 16:24:27,032 | INFO     | sum of square deviations: 762879420.0
[2026-01-09 17:25:16] 2026-01-09 16:24:27,032 | INFO     | sum of deviations: -18566370286.0
[2026-01-09 17:25:16] 2026-01-09 16:24:27,033 | INFO     | mean x: 1767971089.0
[2026-01-09 17:25:16] 2026-01-09 16:24:27,033 | INFO     | mean y: 2543291.8444444444
[2026-01-09 17:25:16] 2026-01-09 16:24:27,033 | INFO     | intersect: 43030058561.9728
[2026-01-09 17:25:16] 2026-01-09 16:24:27,033 | INFO     | chi2: 0.13499096408111422
[2026-01-09 17:25:16] 2026-01-09 16:24:27,033 | INFO     | current memory leak: -24.34 B/s (using 135 data points, chi2=0.13)
[2026-01-09 17:25:16] 2026-01-09 16:24:27,034 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-01-09 17:25:16] 2026-01-09 16:24:27,034 | INFO     | ..............................
[2026-01-09 17:25:16] 2026-01-09 16:24:27,034 | INFO     | . Timing measurements:
[2026-01-09 17:25:16] 2026-01-09 16:24:27,034 | INFO     | . get job = 0 s
[2026-01-09 17:25:16] 2026-01-09 16:24:27,034 | INFO     | . initial setup = 1 s
[2026-01-09 17:25:16] 2026-01-09 16:24:27,035 | INFO     | . payload setup = 6 s
[2026-01-09 17:25:16] 2026-01-09 16:24:27,035 | INFO     | . stage-in = 0 s
[2026-01-09 17:25:16] 2026-01-09 16:24:27,035 | INFO     | . payload execution = 10077 s
[2026-01-09 17:25:16] 2026-01-09 16:24:27,035 | INFO     | . stage-out = 0 s
[2026-01-09 17:25:16] 2026-01-09 16:24:27,035 | INFO     | . log creation = 0 s
[2026-01-09 17:25:16] 2026-01-09 16:24:27,035 | INFO     | ..............................
[2026-01-09 17:25:16] 2026-01-09 16:24:27,148 | INFO     | 
[2026-01-09 17:25:16] 2026-01-09 16:24:27,148 | INFO     | job summary report
[2026-01-09 17:25:16] 2026-01-09 16:24:27,148 | INFO     | --------------------------------------------------
[2026-01-09 17:25:16] 2026-01-09 16:24:27,148 | INFO     | PanDA job id: 6963192139
[2026-01-09 17:25:16] 2026-01-09 16:24:27,148 | INFO     | task id: 47898826
[2026-01-09 17:25:16] 2026-01-09 16:24:27,148 | INFO     | errors: (none)
[2026-01-09 17:25:16] 2026-01-09 16:24:27,148 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 17:25:16] 2026-01-09 16:24:27,149 | INFO     | pilot state: finished 
[2026-01-09 17:25:16] 2026-01-09 16:24:27,149 | INFO     | transexitcode: 0
[2026-01-09 17:25:16] 2026-01-09 16:24:27,149 | INFO     | exeerrorcode: 0
[2026-01-09 17:25:16] 2026-01-09 16:24:27,149 | INFO     | exeerrordiag: 
[2026-01-09 17:25:16] 2026-01-09 16:24:27,149 | INFO     | exitcode: 0
[2026-01-09 17:25:16] 2026-01-09 16:24:27,149 | INFO     | exitmsg: OK
[2026-01-09 17:25:16] 2026-01-09 16:24:27,149 | INFO     | cpuconsumptiontime: 75672 s
[2026-01-09 17:25:16] 2026-01-09 16:24:27,149 | INFO     | nevents: 400
[2026-01-09 17:25:16] 2026-01-09 16:24:27,149 | INFO     | neventsw: 0
[2026-01-09 17:25:16] 2026-01-09 16:24:27,149 | INFO     | pid: 16505
[2026-01-09 17:25:16] 2026-01-09 16:24:27,150 | INFO     | pgrp: 16505
[2026-01-09 17:25:16] 2026-01-09 16:24:27,150 | INFO     | corecount: 8
[2026-01-09 17:25:16] 2026-01-09 16:24:27,150 | INFO     | event service: False
[2026-01-09 17:25:16] 2026-01-09 16:24:27,150 | INFO     | sizes: {0: 2283971, 1: 2283971, 5: 2284261, 11: 2284317, 10088: 2312716, 10090: 2321714, 10091: 2321898, 10098: 2322156}
[2026-01-09 17:25:16] 2026-01-09 16:24:27,150 | INFO     | --------------------------------------------------
[2026-01-09 17:25:16] 2026-01-09 16:24:27,150 | INFO     | 
[2026-01-09 17:25:16] 2026-01-09 16:24:27,150 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-01-09 17:25:16] 2026-01-09 16:24:27,173 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 17:25:16] 2026-01-09 16:24:27,173 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 17:25:16] 2026-01-09 16:24:27,173 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 17:25:16] 2026-01-09 16:24:27,173 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 17:25:16] 2026-01-09 16:24:27,174 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 17:25:16] 2026-01-09 16:24:27,174 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 17:25:16] 2026-01-09 16:24:27,174 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 17:25:16] 2026-01-09 16:24:27,174 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 17:25:16] 2026-01-09 16:24:27,174 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 17:25:16] 2026-01-09 16:24:27,174 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 17:25:16] 2026-01-09 16:24:27,174 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 17:25:16] 2026-01-09 16:24:27,174 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 17:25:16] 2026-01-09 16:24:27,174 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 17:25:16] 2026-01-09 16:24:27,175 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 17:25:16] 2026-01-09 16:24:27,175 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 17:25:16] 2026-01-09 16:24:27,175 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 17:25:16] 2026-01-09 16:24:27,175 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 17:25:16] 2026-01-09 16:24:27,175 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 17:25:16] 2026-01-09 16:24:27,175 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 17:25:16] 2026-01-09 16:24:27,175 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 17:25:16] 2026-01-09 16:24:27,175 | INFO     | job 6963192139 has completed (purged errors)
[2026-01-09 17:25:16] 2026-01-09 16:24:27,176 | INFO     | overall cleanup function is called
[2026-01-09 17:25:16] 2026-01-09 16:24:28,184 | INFO     | --- collectZombieJob: --- 10, [16505]
[2026-01-09 17:25:16] 2026-01-09 16:24:28,184 | INFO     | zombie collector waiting for pid 16505
[2026-01-09 17:25:16] 2026-01-09 16:24:28,184 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 17:25:16] 2026-01-09 16:24:28,184 | INFO     | collected zombie processes
[2026-01-09 17:25:16] 2026-01-09 16:24:28,184 | INFO     | will attempt to kill all subprocesses of pid=16505
[2026-01-09 17:25:16] 2026-01-09 16:24:28,241 | INFO     | process IDs to be killed: [16505] (in reverse order)
[2026-01-09 17:25:16] 2026-01-09 16:24:28,284 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 17:25:16] 2026-01-09 16:24:28,284 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 17:25:16] 2026-01-09 16:24:28,286 | INFO     | did not find any defunct processes belonging to 16505
[2026-01-09 17:25:16] 2026-01-09 16:24:28,287 | INFO     | did not find any defunct processes belonging to 16505
[2026-01-09 17:25:16] 2026-01-09 16:24:28,288 | INFO     | ready for new job
[2026-01-09 17:25:16] 2026-01-09 16:24:28,288 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 17:25:16] 2026-01-09 16:24:28,289 | INFO     | ***************************************
[2026-01-09 17:25:16] 2026-01-09 16:24:28,290 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 17:25:16] 2026-01-09 16:24:28,290 | INFO     | ***************************************
[2026-01-09 17:25:16] 2026-01-09 16:24:28,290 | INFO     | 
[2026-01-09 17:25:16] 2026-01-09 16:24:28,290 | INFO     | pilot is running in a VM
[2026-01-09 17:25:16] 2026-01-09 16:24:28,291 | INFO     | architecture information:
[2026-01-09 17:25:16] 2026-01-09 16:24:28,291 | INFO     | executing command: cat /etc/os-release
[2026-01-09 17:25:16] 2026-01-09 16:24:28,308 | INFO     | cat /etc/os-release:
[2026-01-09 17:25:16] NAME="CentOS Linux"
[2026-01-09 17:25:16] VERSION="7 (Core)"
[2026-01-09 17:25:16] ID="centos"
[2026-01-09 17:25:16] ID_LIKE="rhel fedora"
[2026-01-09 17:25:16] VERSION_ID="7"
[2026-01-09 17:25:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 17:25:16] ANSI_COLOR="0;31"
[2026-01-09 17:25:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 17:25:16] HOME_URL="https://www.centos.org/"
[2026-01-09 17:25:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 17:25:16] 
[2026-01-09 17:25:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 17:25:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 17:25:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 17:25:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 17:25:16] 
[2026-01-09 17:25:16] 2026-01-09 16:24:28,308 | INFO     | ***************************************
[2026-01-09 17:25:16] 2026-01-09 16:24:28,811 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-01-09 17:25:16] 2026-01-09 16:24:28,829 | INFO     | sufficient remaining disk space (498122883072 B)
[2026-01-09 17:25:16] 2026-01-09 16:24:28,829 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 17:25:16] 2026-01-09 16:24:28,829 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 17:25:16] 2026-01-09 16:24:28,830 | INFO     | update_server=False
[2026-01-09 17:25:16] 2026-01-09 16:24:28,830 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 17:25:16] 2026-01-09 16:24:28,830 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 17:25:16] 2026-01-09 16:24:28,831 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 17:25:16] 2026-01-09 16:24:28,985 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 17:25:16] 2026-01-09 16:24:28,985 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 17:25:16] 2026-01-09 16:24:28,986 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 17:25:16] 2026-01-09 16:24:28,986 | INFO     | will abort loop
[2026-01-09 17:25:16] 2026-01-09 16:24:29,123 | INFO     | all payload control threads have been joined
[2026-01-09 17:25:16] 2026-01-09 16:24:29,151 | INFO     | all data control threads have been joined
[2026-01-09 17:25:16] 2026-01-09 16:24:29,835 | INFO     | [job] retrieve thread has finished
[2026-01-09 17:25:16] 2026-01-09 16:24:29,837 | INFO     | [job] queue monitor thread has finished
[2026-01-09 17:25:16] 2026-01-09 16:24:29,893 | INFO     | [payload] validate_post thread has finished
[2026-01-09 17:25:16] 2026-01-09 16:24:29,985 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 17:25:16] 2026-01-09 16:24:29,991 | INFO     | [job] job monitor thread has finished
[2026-01-09 17:25:16] 2026-01-09 16:24:30,129 | INFO     | [payload] control thread has finished
[2026-01-09 17:25:16] 2026-01-09 16:24:30,137 | INFO     | all job control threads have been joined
[2026-01-09 17:25:16] 2026-01-09 16:24:30,156 | INFO     | [data] control thread has finished
[2026-01-09 17:25:16] 2026-01-09 16:24:30,382 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 17:25:16] 2026-01-09 16:24:30,387 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 17:25:16] 2026-01-09 16:24:30,496 | INFO     | [job] validate thread has finished
[2026-01-09 17:25:16] 2026-01-09 16:24:30,837 | INFO     | [data] copytool_out thread has finished
[2026-01-09 17:25:16] 2026-01-09 16:24:30,958 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 17:25:16] 2026-01-09 16:24:31,090 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 17:25:16] 2026-01-09 16:24:31,143 | INFO     | [job] control thread has finished
[2026-01-09 17:25:16] 2026-01-09 16:24:31,170 | INFO     | [payload] failed_post thread has finished
[2026-01-09 17:25:16] 2026-01-09 16:24:31,179 | INFO     | [data] copytool_in thread has finished
[2026-01-09 17:25:16] 2026-01-09 16:24:34,965 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 17:25:16] 2026-01-09 16:24:58,556 | INFO     | PID=10043 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 17:25:16] 2026-01-09 16:24:58,556 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 17:25:16] 2026-01-09 16:24:58,556 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 17:25:16] 2026-01-09 16:24:58,556 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 17:25:16] 2026-01-09 16:25:10,742 | INFO     | [monitor] cgroup control has ended
[2026-01-09 17:25:16] 2026-01-09 16:25:11,155 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140051557504832)>', '<ExcThread(monitor, started 140050805278464)>']
[2026-01-09 17:25:16] 2026-01-09 16:25:11,624 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 17:25:16] 2026-01-09 16:25:11,624 | INFO     | [monitor] control thread has ended
[2026-01-09 17:25:16] 2026-01-09 16:25:16,181 | INFO     | all workflow threads have been joined
[2026-01-09 17:25:16] 2026-01-09 16:25:16,181 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 17:25:16] 2026-01-09 16:25:16,182 | INFO     | traces error code: 0
[2026-01-09 17:25:16] 2026-01-09 16:25:16,182 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 17:25:16] 2026-01-09 16:25:16,309 [wrapper] ==== pilot stdout END ====
[2026-01-09 17:25:16] 2026-01-09 16:25:16,312 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 17:25:16] 2026-01-09 16:25:16,316 [wrapper] pilotpid: 10043
[2026-01-09 17:25:16] 2026-01-09 16:25:16,318 [wrapper] Pilot exit status: 0
[2026-01-09 17:25:16] 2026-01-09 16:25:16,332 [wrapper] pandaids: 6963192139
[2026-01-09 17:25:16] 2026-01-09 16:25:16,363 [wrapper] cleanup supervisor_pilot  2978 10044
[2026-01-09 17:25:16] 2026-01-09 16:25:16,368 [wrapper] Test setup, not cleaning
[2026-01-09 17:25:16] 2026-01-09 16:25:16,372 [wrapper] apfmon messages muted
[2026-01-09 17:25:16] 2026-01-09 16:25:16,375 [wrapper] ==== wrapper stdout END ====
[2026-01-09 17:25:16] 2026-01-09 16:25:16,378 [wrapper] ==== wrapper stderr END ====
[2026-01-09 17:25:16]  *** Error codes and diagnostics ***
[2026-01-09 17:25:16]     "exeErrorCode": 0,
[2026-01-09 17:25:16]     "exeErrorDiag": "",
[2026-01-09 17:25:16]     "pilotErrorCode": 0,
[2026-01-09 17:25:16]     "pilotErrorDiag": "",
[2026-01-09 17:25:16]  *** Listing of results directory ***
[2026-01-09 17:25:16] total 435348
[2026-01-09 17:25:16] -rw-r--r--. 1 boinc boinc    579449 Jan  9 05:21 pilot3.tar.gz
[2026-01-09 17:25:16] -rwx------. 1 boinc boinc     36322 Jan  9 05:22 runpilot2-wrapper.sh
[2026-01-09 17:25:16] -rw-r--r--. 1 boinc boinc      5112 Jan  9 05:24 queuedata.json
[2026-01-09 17:25:16] -rw-r--r--. 1 boinc boinc       100 Jan  9 14:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 17:25:16] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 14:35 run_atlas
[2026-01-09 17:25:16] -rw-r--r--. 1 boinc boinc       105 Jan  9 14:35 job.xml
[2026-01-09 17:25:16] -rw-r--r--. 1 boinc boinc      6389 Jan  9 14:35 init_data.xml
[2026-01-09 17:25:16] -rw-r--r--. 2 boinc boinc 222638363 Jan  9 14:35 EVNT.47898824._001499.pool.root.1
[2026-01-09 17:25:16] -rw-r--r--. 2 boinc boinc     15847 Jan  9 14:35 start_atlas.sh
[2026-01-09 17:25:16] drwxrwx--x. 2 boinc boinc        68 Jan  9 14:35 shared
[2026-01-09 17:25:16] -rw-r--r--. 2 boinc boinc    592407 Jan  9 14:35 input.tar.gz
[2026-01-09 17:25:16] -rw-r--r--. 1 boinc boinc         0 Jan  9 14:35 boinc_lockfile
[2026-01-09 17:25:16] -rw-r--r--. 1 boinc boinc      2520 Jan  9 14:35 pandaJob.out
[2026-01-09 17:25:16] -rw-------. 1 boinc boinc    989377 Jan  9 14:35 agis_schedconf.cvmfs.json
[2026-01-09 17:25:16] -rw-------. 1 boinc boinc   1516240 Jan  9 14:35 agis_ddmendpoints.agis.ALL.json
[2026-01-09 17:25:16] drwx------. 5 boinc boinc      4096 Jan  9 14:35 pilot3
[2026-01-09 17:25:16] -rw-------. 1 boinc boinc 215753415 Jan  9 17:23 HITS.47898826._039007.pool.root.1
[2026-01-09 17:25:16] -rw-r--r--. 1 boinc boinc       531 Jan  9 17:23 boinc_task_state.xml
[2026-01-09 17:25:16] -rw-------. 1 boinc boinc        95 Jan  9 17:24 pilot_heartbeat.json
[2026-01-09 17:25:16] -rw-------. 1 boinc boinc      1014 Jan  9 17:24 memory_monitor_summary.json
[2026-01-09 17:25:16] -rw-------. 1 boinc boinc    391276 Jan  9 17:24 log.47898826._039007.job.log.tgz.1
[2026-01-09 17:25:16] -rw-------. 1 boinc boinc      7778 Jan  9 17:24 heartbeat.json
[2026-01-09 17:25:16] -rw-r--r--. 1 boinc boinc        28 Jan  9 17:25 wrapper_checkpoint.txt
[2026-01-09 17:25:16] -rw-r--r--. 1 boinc boinc      8192 Jan  9 17:25 boinc_mmap_file
[2026-01-09 17:25:16] -rw-------. 1 boinc boinc      4995 Jan  9 17:25 pilotlog.txt
[2026-01-09 17:25:16] -rw-------. 1 boinc boinc   1358918 Jan  9 17:25 log.47898826._039007.job.log.1
[2026-01-09 17:25:16] -rw-------. 1 boinc boinc       357 Jan  9 17:25 output.list
[2026-01-09 17:25:16] -rw-r--r--. 1 boinc boinc       620 Jan  9 17:25 runtime_log
[2026-01-09 17:25:16] -rw-------. 1 boinc boinc   1771520 Jan  9 17:25 result.tar.gz
[2026-01-09 17:25:16] -rw-r--r--. 1 boinc boinc      8817 Jan  9 17:25 runtime_log.err
[2026-01-09 17:25:16] -rw-------. 1 boinc boinc       655 Jan  9 17:25 Fq6MDmdCJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmVBmKDmF59C4n.diag
[2026-01-09 17:25:16] -rw-r--r--. 1 boinc boinc     20739 Jan  9 17:25 stderr.txt
[2026-01-09 17:25:16] HITS file was successfully produced:
[2026-01-09 17:25:16] -rw-------. 1 boinc boinc 215753415 Jan  9 17:23 shared/HITS.pool.root.1
[2026-01-09 17:25:16]  *** Contents of shared directory: ***
[2026-01-09 17:25:16] total 430452
[2026-01-09 17:25:16] -rw-r--r--. 2 boinc boinc 222638363 Jan  9 14:35 ATLAS.root_0
[2026-01-09 17:25:16] -rw-r--r--. 2 boinc boinc     15847 Jan  9 14:35 start_atlas.sh
[2026-01-09 17:25:16] -rw-r--r--. 2 boinc boinc    592407 Jan  9 14:35 input.tar.gz
[2026-01-09 17:25:16] -rw-------. 1 boinc boinc 215753415 Jan  9 17:23 HITS.pool.root.1
[2026-01-09 17:25:16] -rw-------. 1 boinc boinc   1771520 Jan  9 17:25 result.tar.gz
17:25:18 (6288): run_atlas exited; CPU time 75742.956566
17:25:18 (6288): called boinc_finish(0)

</stderr_txt>
]]>

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