Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-11 14:43:16 (37584): vboxwrapper version 26210
2026-01-11 14:43:16 (37584): BOINC client version: 8.2.8
2026-01-11 14:43:16 (37584): Detected: VirtualBox VboxManage Interface (Version: 7.2.2)
2026-01-11 14:43:17 (37584): Successfully copied 'init_data.xml' to the shared directory.
2026-01-11 14:43:17 (37584): Create VM. (boinc_12c6cec9a5b878ca, slot#12)
2026-01-11 14:43:17 (37584): Setting Memory Size for VM. (4800MB)
2026-01-11 14:43:18 (37584): Setting CPU Count for VM. (8)
2026-01-11 14:43:18 (37584): Setting Chipset Options for VM.
2026-01-11 14:43:18 (37584): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-11 14:43:19 (37584): Setting Boot Options for VM.
2026-01-11 14:43:19 (37584): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-11 14:43:19 (37584): Enabling VM Network Access.
2026-01-11 14:43:20 (37584): Disabling USB Support for VM.
2026-01-11 14:43:20 (37584): Disabling COM Port Support for VM.
2026-01-11 14:43:20 (37584): Disabling LPT Port Support for VM.
2026-01-11 14:43:20 (37584): Disabling Audio Support for VM.
2026-01-11 14:43:21 (37584): Disabling Clipboard Support for VM.
2026-01-11 14:43:21 (37584): Disabling Drag and Drop Support for VM.
2026-01-11 14:43:21 (37584): Adding storage controller(s) to VM.
2026-01-11 14:43:21 (37584): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-11 14:43:22 (37584): Adding VirtualBox Guest Additions to VM.
2026-01-11 14:43:22 (37584): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-11 14:43:23 (37584): forwarding host port 49881 to guest port 80
2026-01-11 14:43:23 (37584): Enabling remote desktop for VM.
2026-01-11 14:43:23 (37584): Required extension pack not installed, remote desktop not enabled.
2026-01-11 14:43:23 (37584): Enabling shared directory for VM.
2026-01-11 14:43:24 (37584): Starting VM using VBoxManage interface. (boinc_12c6cec9a5b878ca, slot#12)
2026-01-11 14:43:29 (37584): Successfully started VM. (PID = '23932')
2026-01-11 14:43:29 (37584): Reporting VM Process ID to BOINC.
2026-01-11 14:43:29 (37584): Guest Log: BIOS: VirtualBox 7.2.2
2026-01-11 14:43:29 (37584): Guest Log: CPUID EDX: 0x178bfbff
2026-01-11 14:43:29 (37584): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-11 14:43:29 (37584): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-11 14:43:29 (37584): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-11 14:43:29 (37584): Detected: Web Application Enabled (http://localhost:49881)
2026-01-11 14:43:29 (37584): Preference change detected
2026-01-11 14:43:29 (37584): Setting CPU throttle for VM. (98%)
2026-01-11 14:43:29 (37584): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-11 14:43:31 (37584): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-11 14:43:31 (37584): Guest Log: BIOS: Booting from Hard Disk...
2026-01-11 14:43:34 (37584): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-11 14:43:34 (37584): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-11 14:43:34 (37584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-11 14:43:34 (37584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-11 14:43:34 (37584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-11 14:43:34 (37584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-11 14:43:34 (37584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-11 14:43:34 (37584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-11 14:43:34 (37584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-11 14:43:34 (37584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-11 14:43:34 (37584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-11 14:43:34 (37584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-11 14:43:34 (37584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-11 14:43:34 (37584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-11 14:43:34 (37584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-11 14:43:34 (37584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-11 14:43:34 (37584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-11 14:43:34 (37584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-11 14:43:34 (37584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-11 14:43:34 (37584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-11 14:43:34 (37584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-11 14:43:34 (37584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-11 14:43:34 (37584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-11 14:43:34 (37584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-11 14:43:34 (37584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-11 14:43:34 (37584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-11 14:43:34 (37584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-11 14:43:34 (37584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-11 14:43:34 (37584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-11 14:43:34 (37584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-11 14:43:34 (37584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-11 14:43:34 (37584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-11 14:43:39 (37584): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-11 14:43:39 (37584): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-11 14:43:47 (37584): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-11 14:43:47 (37584): Guest Log: 00:00:00.000116 main     Log opened 2026-01-11T14:43:45.604934000Z
2026-01-11 14:43:47 (37584): Guest Log: 00:00:00.000236 main     OS Product: Linux
2026-01-11 14:43:47 (37584): Guest Log: 00:00:00.000272 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-11 14:43:47 (37584): Guest Log: 00:00:00.000303 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-11 14:43:47 (37584): Guest Log: 00:00:00.000337 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-11 14:43:47 (37584): Guest Log: 00:00:00.000338 main     Process ID: 1369
2026-01-11 14:43:47 (37584): Guest Log: 00:00:00.000338 main     Package type: LINUX_64BITS_GENERIC
2026-01-11 14:43:47 (37584): Guest Log: 00:00:00.000868 main     5.2.32 r132073 started. Verbose level = 0
2026-01-11 14:43:47 (37584): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-11 14:43:47 (37584): Guest Log: [INFO] Mounting shared directory
2026-01-11 14:43:47 (37584): Guest Log: [INFO] Checking for init_data.xml
2026-01-11 14:43:57 (37584): Guest Log: 00:00:10.018553 timesync vgsvcTimeSyncWorker: Radical guest time change: 25 211 102 255 000ns (GuestNow=1 768 167 836 709 285 000 ns GuestLast=1 768 142 625 607 030 000 ns fSetTimeLastLoop=true )
2026-01-11 14:44:52 (37584): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-11 14:44:52 (37584): Guest Log: [INFO] Detected branch: prod
2026-01-11 14:44:52 (37584): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-11 14:44:52 (37584): Guest Log: Copying input files
2026-01-11 14:44:53 (37584): Guest Log: Copied input files into RunAtlas.
2026-01-11 14:44:53 (37584): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-11 14:44:53 (37584): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-11 14:44:53 (37584): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-11 14:44:53 (37584): Guest Log: Further information can be found at the LHC@home message board.
2026-01-11 14:45:01 (37584): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-11 14:45:01 (37584): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-11 14:45:01 (37584): Guest Log: 2.6.3.0 1673 0 32176 155029 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-01-11 14:45:01 (37584): Guest Log: copied the webapp to /var/www
2026-01-11 14:45:01 (37584): Guest Log: ATHENA_PROC_NUMBER=8
2026-01-11 14:45:01 (37584): Guest Log: ATHENA_CORE_NUMBER=8
2026-01-11 14:45:02 (37584): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-11 14:45:02 (37584): Guest Log:  *** Starting ATLAS job. (PandaID=6963192149 taskID=47898826) ***
2026-01-11 16:23:33 (37584): Status Report: Elapsed Time: '6000.000000'
2026-01-11 16:23:33 (37584): Status Report: CPU Time: '43347.625000'
2026-01-11 16:47:02 (37584): Guest Log:  *** Job finished ***
2026-01-11 16:47:02 (37584): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-11 16:47:02 (37584): Guest Log: 2026-01-11 23:46:44,150 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-01-11 16:47:02 (37584): Guest Log: 2026-01-11 23:46:44,150 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-11 16:47:02 (37584): Guest Log: 2026-01-11 23:46:50,203 | INFO     | [monitor] cgroup control has ended
2026-01-11 16:47:02 (37584): Guest Log: 2026-01-11 23:46:51,822 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139897501775680)>', '<ExcThread(monitor, started 139896547178240)>']
2026-01-11 16:47:02 (37584): Guest Log: 2026-01-11 23:46:52,364 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-11 16:47:02 (37584): Guest Log: 2026-01-11 23:46:52,364 | INFO     | [monitor] control thread has ended
2026-01-11 16:47:02 (37584): Guest Log: 2026-01-11 23:46:56,898 | INFO     | all workflow threads have been joined
2026-01-11 16:47:02 (37584): Guest Log: 2026-01-11 23:46:56,898 | INFO     | end of generic workflow (traces error code: 0)
2026-01-11 16:47:02 (37584): Guest Log: 2026-01-11 23:46:56,898 | INFO     | traces error code: 0
2026-01-11 16:47:02 (37584): Guest Log: 2026-01-11 23:46:56,898 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-11 16:47:02 (37584): Guest Log: 2026-01-11 23:46:57,043 [wrapper] ==== pilot stdout END ====
2026-01-11 16:47:02 (37584): Guest Log: 2026-01-11 23:46:57,048 [wrapper] ==== wrapper stdout RESUME ====
2026-01-11 16:47:02 (37584): Guest Log: 2026-01-11 23:46:57,052 [wrapper] pilotpid: 6104
2026-01-11 16:47:02 (37584): Guest Log: 2026-01-11 23:46:57,056 [wrapper] Pilot exit status: 0
2026-01-11 16:47:02 (37584): Guest Log: 2026-01-11 23:46:57,443 [wrapper] pandaids: 6963192149
2026-01-11 16:47:02 (37584): Guest Log: 2026-01-11 23:46:57,469 [wrapper] cleanup supervisor_pilot  5291 6105
2026-01-11 16:47:02 (37584): Guest Log: 2026-01-11 23:46:57,475 [wrapper] Test setup, not cleaning
2026-01-11 16:47:02 (37584): Guest Log: 2026-01-11 23:46:57,480 [wrapper] apfmon messages muted
2026-01-11 16:47:02 (37584): Guest Log: 2026-01-11 23:46:57,485 [wrapper] ==== wrapper stdout END ====
2026-01-11 16:47:02 (37584): Guest Log: 2026-01-11 23:46:57,491 [wrapper] ==== wrapper stderr END ====
2026-01-11 16:47:02 (37584): Guest Log:  *** Error codes and diagnostics ***
2026-01-11 16:47:02 (37584): Guest Log:     "exeErrorCode": 0,
2026-01-11 16:47:02 (37584): Guest Log:     "exeErrorDiag": "",
2026-01-11 16:47:02 (37584): Guest Log:     "pilotErrorCode": 0,
2026-01-11 16:47:02 (37584): Guest Log:     "pilotErrorDiag": "",
2026-01-11 16:47:02 (37584): Guest Log:  *** Listing of results directory ***
2026-01-11 16:47:02 (37584): Guest Log: total 222016
2026-01-11 16:47:02 (37584): Guest Log: -rw-r--r--. 1 atlas atlas    579449 Jan  9 04:21 pilot3.tar.gz
2026-01-11 16:47:02 (37584): Guest Log: -rwx------. 1 atlas atlas     36322 Jan  9 04:22 runpilot2-wrapper.sh
2026-01-11 16:47:02 (37584): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jan  9 04:24 queuedata.json
2026-01-11 16:47:02 (37584): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Jan 11 21:44 start_atlas.sh
2026-01-11 16:47:02 (37584): Guest Log: -rwxr-xr-x. 1 atlas atlas    592406 Jan 11 21:44 input.tar.gz
2026-01-11 16:47:02 (37584): Guest Log: -rwxr-xr-x. 1 atlas atlas      8619 Jan 11 21:44 init_data.xml
2026-01-11 16:47:02 (37584): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 11 21:44 EVNT.47898824._001499.pool.root.1 -> /data/./ATLAS.root_0
2026-01-11 16:47:02 (37584): Guest Log: -rw-r--r--. 1 atlas atlas      2520 Jan 11 21:45 pandaJob.out
2026-01-11 16:47:02 (37584): Guest Log: -rw-------. 1 atlas atlas    989954 Jan 11 21:45 agis_schedconf.cvmfs.json
2026-01-11 16:47:02 (37584): Guest Log: -rw-------. 1 atlas atlas   1516240 Jan 11 21:45 agis_ddmendpoints.agis.ALL.json
2026-01-11 16:47:02 (37584): Guest Log: drwx------. 5 atlas atlas      4096 Jan 11 21:45 pilot3
2026-01-11 16:47:02 (37584): Guest Log: -rw-------. 1 atlas atlas 220808248 Jan 11 23:45 HITS.47898826._039017.pool.root.1
2026-01-11 16:47:02 (37584): Guest Log: -rw-------. 1 atlas atlas      1027 Jan 11 23:45 memory_monitor_summary.json
2026-01-11 16:47:02 (37584): Guest Log: -rw-------. 1 atlas atlas    364707 Jan 11 23:45 log.47898826._039017.job.log.tgz.1
2026-01-11 16:47:02 (37584): Guest Log: -rw-------. 1 atlas atlas        95 Jan 11 23:45 pilot_heartbeat.json
2026-01-11 16:47:02 (37584): Guest Log: -rw-------. 1 atlas atlas      7797 Jan 11 23:46 heartbeat.json
2026-01-11 16:47:02 (37584): Guest Log: -rw-------. 1 atlas atlas      4877 Jan 11 23:46 pilotlog.txt
2026-01-11 16:47:02 (37584): Guest Log: -rw-------. 1 atlas atlas    981278 Jan 11 23:46 log.47898826._039017.job.log.1
2026-01-11 16:47:02 (37584): Guest Log: -rw-------. 1 atlas atlas       357 Jan 11 23:46 output.list
2026-01-11 16:47:02 (37584): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 11 23:46 runtime_log
2026-01-11 16:47:02 (37584): Guest Log: -rw-------. 1 atlas atlas   1361920 Jan 11 23:46 result.tar.gz
2026-01-11 16:47:02 (37584): Guest Log: -rw-r--r--. 1 atlas atlas      8716 Jan 11 23:46 runtime_log.err
2026-01-11 16:47:02 (37584): Guest Log: -rw-------. 1 atlas atlas       643 Jan 11 23:46 GYBNDmdCJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmYBmKDmwYzTnm.diag
2026-01-11 16:47:02 (37584): Guest Log: Looking for outputfile HITS.47898826._039017.pool.root.1
2026-01-11 16:47:02 (37584): Guest Log: HITS file was successfully produced
2026-01-11 16:47:02 (37584): Guest Log: -rw-------. 1 atlas atlas 220808248 Jan 11 23:45 /home/atlas/RunAtlas/HITS.47898826._039017.pool.root.1
2026-01-11 16:47:03 (37584): Guest Log: Successfully finished the ATLAS job!
2026-01-11 16:47:03 (37584): Guest Log: Copying the results back to the shared directory!
2026-01-11 16:47:03 (37584): Guest Log:  *** Contents of shared directory: ***
2026-01-11 16:47:03 (37584): Guest Log: total 435000
2026-01-11 16:47:03 (37584): Guest Log: -rwxrwxrwx. 1 root root 222638363 Jan 11 21:43 ATLAS.root_0
2026-01-11 16:47:03 (37584): Guest Log: -rwxrwxrwx. 1 root root 220808248 Jan 11  2026 HITS.pool.root.1
2026-01-11 16:47:03 (37584): Guest Log: -rwxrwxrwx. 1 root root      8619 Jan 11 21:43 init_data.xml
2026-01-11 16:47:03 (37584): Guest Log: -rwxrwxrwx. 1 root root    592406 Jan  9 10:51 input.tar.gz
2026-01-11 16:47:03 (37584): Guest Log: -rwxrwxrwx. 1 root root   1361920 Jan 11  2026 result.tar.gz
2026-01-11 16:47:03 (37584): Guest Log: -rwxrwxrwx. 1 root root     15847 Jan  9 10:51 start_atlas.sh
2026-01-11 16:47:03 (37584): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-11 16:47:03 (37584): VM Completion File Detected.
2026-01-11 16:47:03 (37584): Powering off VM.
2026-01-11 16:47:03 (37584): Successfully stopped VM.
2026-01-11 16:47:03 (37584): Deregistering VM. (boinc_12c6cec9a5b878ca, slot#12)
2026-01-11 16:47:03 (37584): Removing network bandwidth throttle group from VM.
2026-01-11 16:47:04 (37584): Removing VM from VirtualBox.
2026-01-11 16:47:09 (37584): called boinc_finish(0)

</stderr_txt>
]]>

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