Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:02:11 (670978): wrapper (7.7.26015): starting
03:02:11 (670978): wrapper: running run_atlas (--nthreads 6)
[2026-01-10 03:02:11] Arguments: --nthreads 6
[2026-01-10 03:02:11] Threads: 6
[2026-01-10 03:02:11] Checking for CVMFS
[2026-01-10 03:02:11] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 03:02:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 03:02:11] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 03:02:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 03:02:13] 2.13.3.0 123159 1518 74184 154951 1 57 39063717 52428800 922 130560 0 1745801 99.993 52286 114 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-10 03:02:13] CVMFS is ok
[2026-01-10 03:02:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 03:02:13] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-10 03:02:13] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-10 03:02:13] Further information can be found at the LHC@home message board.
[2026-01-10 03:02:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 03:02:13] Checking for apptainer binary...
[2026-01-10 03:02:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 03:02:13] Running /usr/bin/apptainer --version
[2026-01-10 03:02:13] apptainer version 1.4.5-2.el9
[2026-01-10 03:02:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 03:02:13] Atto003
[2026-01-10 03:02:13] apptainer works
[2026-01-10 03:02:13] Set ATHENA_PROC_NUMBER=6
[2026-01-10 03:02:13] Set ATHENA_CORE_NUMBER=6
[2026-01-10 03:02:13] Starting ATLAS job with PandaID=6963189483
[2026-01-10 03:02:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 05:21:42]  *** The last 200 lines of the pilot log: ***
[2026-01-10 05:21:42] 2026-01-09 20:21:10,385 | INFO     | mean y: 2426666.661764706
[2026-01-10 05:21:42] 2026-01-09 20:21:10,385 | INFO     | intersect: -45171972654.43038
[2026-01-10 05:21:42] 2026-01-09 20:21:10,385 | INFO     | chi2: 1.9294618946415127
[2026-01-10 05:21:42] 2026-01-09 20:21:10,385 | INFO     | sum of square deviations: 697054930.0
[2026-01-10 05:21:42] 2026-01-09 20:21:10,386 | INFO     | sum of deviations: 19243054327.0
[2026-01-10 05:21:42] 2026-01-09 20:21:10,386 | INFO     | mean x: 1767985732.0
[2026-01-10 05:21:42] 2026-01-09 20:21:10,386 | INFO     | mean y: 2425405.175572519
[2026-01-10 05:21:42] 2026-01-09 20:21:10,386 | INFO     | intersect: -48804984206.34078
[2026-01-10 05:21:42] 2026-01-09 20:21:10,386 | INFO     | chi2: 1.9327757187897772
[2026-01-10 05:21:42] 2026-01-09 20:21:10,386 | INFO     | current chi2=1.9327757187897772 (change=-0.1717486184861981 %)
[2026-01-10 05:21:42] 2026-01-09 20:21:10,386 | INFO     | right removable region: 130
[2026-01-10 05:21:42] 2026-01-09 20:21:10,386 | INFO     | sum of square deviations: 697054930.0
[2026-01-10 05:21:42] 2026-01-09 20:21:10,387 | INFO     | sum of deviations: -5912080654.999998
[2026-01-10 05:21:42] 2026-01-09 20:21:10,387 | INFO     | mean x: 1767986037.0
[2026-01-10 05:21:42] 2026-01-09 20:21:10,387 | INFO     | mean y: 2473728.473282443
[2026-01-10 05:21:42] 2026-01-09 20:21:10,387 | INFO     | intersect: 14997670803.770935
[2026-01-10 05:21:42] 2026-01-09 20:21:10,387 | INFO     | chi2: 0.1089042237600335
[2026-01-10 05:21:42] 2026-01-09 20:21:10,387 | INFO     | current chi2=0.1089042237600335 (change=94.35572041808747 %)
[2026-01-10 05:21:42] 2026-01-09 20:21:10,388 | INFO     | sum of square deviations: 620244187.5
[2026-01-10 05:21:42] 2026-01-09 20:21:10,388 | INFO     | sum of deviations: -1968704514.4999995
[2026-01-10 05:21:42] 2026-01-09 20:21:10,388 | INFO     | mean x: 1767986189.5
[2026-01-10 05:21:42] 2026-01-09 20:21:10,388 | INFO     | mean y: 2465774.9444444445
[2026-01-10 05:21:42] 2026-01-09 20:21:10,388 | INFO     | intersect: 5614194934.183525
[2026-01-10 05:21:42] 2026-01-09 20:21:10,388 | INFO     | chi2: 0.06515360214545177
[2026-01-10 05:21:42] 2026-01-09 20:21:10,388 | INFO     | current chi2=0.06515360214545177 (change=40.173484649213094 %)
[2026-01-10 05:21:42] 2026-01-09 20:21:10,389 | INFO     | sum of square deviations: 549294020.0
[2026-01-10 05:21:42] 2026-01-09 20:21:10,389 | INFO     | sum of deviations: 1743819261.0
[2026-01-10 05:21:42] 2026-01-09 20:21:10,389 | INFO     | mean x: 1767986342.0
[2026-01-10 05:21:42] 2026-01-09 20:21:10,389 | INFO     | mean y: 2457951.1983471075
[2026-01-10 05:21:42] 2026-01-09 20:21:10,389 | INFO     | intersect: -5610289546.6981945
[2026-01-10 05:21:42] 2026-01-09 20:21:10,389 | INFO     | chi2: 0.0009754479814301
[2026-01-10 05:21:42] 2026-01-09 20:21:10,390 | INFO     | current chi2=0.0009754479814301 (change=98.50284873083078 %)
[2026-01-10 05:21:42] 2026-01-09 20:21:10,390 | INFO     | sum of square deviations: 483971865.0
[2026-01-10 05:21:42] 2026-01-09 20:21:10,390 | INFO     | sum of deviations: 1244281202.4999998
[2026-01-10 05:21:42] 2026-01-09 20:21:10,390 | INFO     | mean x: 1767986494.5
[2026-01-10 05:21:42] 2026-01-09 20:21:10,390 | INFO     | mean y: 2459110.6637931033
[2026-01-10 05:21:42] 2026-01-09 20:21:10,390 | INFO     | intersect: -4542995946.687979
[2026-01-10 05:21:42] 2026-01-09 20:21:10,391 | INFO     | chi2: 0.0006867293081060937
[2026-01-10 05:21:42] 2026-01-09 20:21:10,391 | INFO     | current chi2=0.0006867293081060937 (change=29.59857202233554 %)
[2026-01-10 05:21:42] 2026-01-09 20:21:10,391 | INFO     | sum of square deviations: 424045160.0
[2026-01-10 05:21:42] 2026-01-09 20:21:10,391 | INFO     | sum of deviations: 907255196.0
[2026-01-10 05:21:42] 2026-01-09 20:21:10,391 | INFO     | mean x: 1767986647.0
[2026-01-10 05:21:42] 2026-01-09 20:21:10,391 | INFO     | mean y: 2459967.972972973
[2026-01-10 05:21:42] 2026-01-09 20:21:10,391 | INFO     | intersect: -3780191558.928944
[2026-01-10 05:21:42] 2026-01-09 20:21:10,392 | INFO     | chi2: 0.0005802540563918298
[2026-01-10 05:21:42] 2026-01-09 20:21:10,392 | INFO     | current chi2=0.0005802540563918298 (change=15.504690197060059 %)
[2026-01-10 05:21:42] 2026-01-09 20:21:10,392 | INFO     | left removable region: 50
[2026-01-10 05:21:42] 2026-01-09 20:21:10,392 | INFO     | sum of square deviations: 158737860.0
[2026-01-10 05:21:42] 2026-01-09 20:21:10,392 | INFO     | sum of deviations: 130833562.5
[2026-01-10 05:21:42] 2026-01-09 20:21:10,392 | INFO     | mean x: 1767987226.5
[2026-01-10 05:21:42] 2026-01-09 20:21:10,392 | INFO     | mean y: 2462743.4875
[2026-01-10 05:21:42] 2026-01-09 20:21:10,392 | INFO     | intersect: -1454732580.2839646
[2026-01-10 05:21:42] 2026-01-09 20:21:10,392 | INFO     | chi2: 0.00024171070557934735
[2026-01-10 05:21:42] 2026-01-09 20:21:10,393 | INFO     | current memory leak: 0.82 B/s (using 80 data points, chi2=0.00)
[2026-01-10 05:21:42] 2026-01-09 20:21:10,393 | INFO     | could have reported an average CPU frequency of 3612 MHz (8 samples)
[2026-01-10 05:21:42] 2026-01-09 20:21:10,393 | INFO     | ..............................
[2026-01-10 05:21:42] 2026-01-09 20:21:10,393 | INFO     | . Timing measurements:
[2026-01-10 05:21:42] 2026-01-09 20:21:10,393 | INFO     | . get job = 0 s
[2026-01-10 05:21:42] 2026-01-09 20:21:10,393 | INFO     | . initial setup = 5 s
[2026-01-10 05:21:42] 2026-01-09 20:21:10,393 | INFO     | . payload setup = 5 s
[2026-01-10 05:21:42] 2026-01-09 20:21:10,393 | INFO     | . stage-in = 0 s
[2026-01-10 05:21:42] 2026-01-09 20:21:10,393 | INFO     | . payload execution = 8290 s
[2026-01-10 05:21:42] 2026-01-09 20:21:10,393 | INFO     | . stage-out = 0 s
[2026-01-10 05:21:42] 2026-01-09 20:21:10,393 | INFO     | . log creation = 0 s
[2026-01-10 05:21:42] 2026-01-09 20:21:10,394 | INFO     | ..............................
[2026-01-10 05:21:42] 2026-01-09 20:21:10,779 | INFO     | 
[2026-01-10 05:21:42] 2026-01-09 20:21:10,779 | INFO     | job summary report
[2026-01-10 05:21:42] 2026-01-09 20:21:10,779 | INFO     | --------------------------------------------------
[2026-01-10 05:21:42] 2026-01-09 20:21:10,779 | INFO     | PanDA job id: 6963189483
[2026-01-10 05:21:42] 2026-01-09 20:21:10,779 | INFO     | task id: 47898826
[2026-01-10 05:21:42] 2026-01-09 20:21:10,779 | INFO     | errors: (none)
[2026-01-10 05:21:42] 2026-01-09 20:21:10,780 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 05:21:42] 2026-01-09 20:21:10,780 | INFO     | pilot state: finished 
[2026-01-10 05:21:42] 2026-01-09 20:21:10,780 | INFO     | transexitcode: 0
[2026-01-10 05:21:42] 2026-01-09 20:21:10,780 | INFO     | exeerrorcode: 0
[2026-01-10 05:21:42] 2026-01-09 20:21:10,780 | INFO     | exeerrordiag: 
[2026-01-10 05:21:42] 2026-01-09 20:21:10,780 | INFO     | exitcode: 0
[2026-01-10 05:21:42] 2026-01-09 20:21:10,780 | INFO     | exitmsg: OK
[2026-01-10 05:21:42] 2026-01-09 20:21:10,780 | INFO     | cpuconsumptiontime: 46827 s
[2026-01-10 05:21:42] 2026-01-09 20:21:10,780 | INFO     | nevents: 400
[2026-01-10 05:21:42] 2026-01-09 20:21:10,780 | INFO     | neventsw: 0
[2026-01-10 05:21:42] 2026-01-09 20:21:10,780 | INFO     | pid: 681479
[2026-01-10 05:21:42] 2026-01-09 20:21:10,780 | INFO     | pgrp: 681479
[2026-01-10 05:21:42] 2026-01-09 20:21:10,780 | INFO     | corecount: 6
[2026-01-10 05:21:42] 2026-01-09 20:21:10,780 | INFO     | event service: False
[2026-01-10 05:21:42] 2026-01-09 20:21:10,780 | INFO     | sizes: {0: 2283855, 1: 2283997, 5: 2284259, 11: 2284315, 8299: 2312246, 8300: 2321428, 8312: 2321566}
[2026-01-10 05:21:42] 2026-01-09 20:21:10,781 | INFO     | --------------------------------------------------
[2026-01-10 05:21:42] 2026-01-09 20:21:10,781 | INFO     | 
[2026-01-10 05:21:42] 2026-01-09 20:21:10,781 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2026-01-10 05:21:42] 2026-01-09 20:21:10,791 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 05:21:42] 2026-01-09 20:21:10,791 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 05:21:42] 2026-01-09 20:21:10,791 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 05:21:42] 2026-01-09 20:21:10,791 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 05:21:42] 2026-01-09 20:21:10,792 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 05:21:42] 2026-01-09 20:21:10,792 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 05:21:42] 2026-01-09 20:21:10,792 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 05:21:42] 2026-01-09 20:21:10,792 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 05:21:42] 2026-01-09 20:21:10,792 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 05:21:42] 2026-01-09 20:21:10,792 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 05:21:42] 2026-01-09 20:21:10,792 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 05:21:42] 2026-01-09 20:21:10,792 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 05:21:42] 2026-01-09 20:21:10,792 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 05:21:42] 2026-01-09 20:21:10,792 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 05:21:42] 2026-01-09 20:21:10,792 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 05:21:42] 2026-01-09 20:21:10,792 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 05:21:42] 2026-01-09 20:21:10,792 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 05:21:42] 2026-01-09 20:21:10,793 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 05:21:42] 2026-01-09 20:21:10,793 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 05:21:42] 2026-01-09 20:21:10,793 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 05:21:42] 2026-01-09 20:21:10,793 | INFO     | job 6963189483 has completed (purged errors)
[2026-01-10 05:21:42] 2026-01-09 20:21:10,793 | INFO     | overall cleanup function is called
[2026-01-10 05:21:42] 2026-01-09 20:21:11,799 | INFO     | --- collectZombieJob: --- 10, [681479]
[2026-01-10 05:21:42] 2026-01-09 20:21:11,799 | INFO     | zombie collector waiting for pid 681479
[2026-01-10 05:21:42] 2026-01-09 20:21:11,799 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 05:21:42] 2026-01-09 20:21:11,799 | INFO     | collected zombie processes
[2026-01-10 05:21:42] 2026-01-09 20:21:11,799 | INFO     | will attempt to kill all subprocesses of pid=681479
[2026-01-10 05:21:42] 2026-01-09 20:21:11,871 | INFO     | process IDs to be killed: [681479] (in reverse order)
[2026-01-10 05:21:42] 2026-01-09 20:21:11,898 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 05:21:42] 2026-01-09 20:21:11,899 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 05:21:42] 2026-01-09 20:21:11,901 | INFO     | did not find any defunct processes belonging to 681479
[2026-01-10 05:21:42] 2026-01-09 20:21:11,903 | INFO     | did not find any defunct processes belonging to 681479
[2026-01-10 05:21:42] 2026-01-09 20:21:11,903 | INFO     | ready for new job
[2026-01-10 05:21:42] 2026-01-09 20:21:11,903 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 05:21:42] 2026-01-09 20:21:11,904 | INFO     | ***************************************
[2026-01-10 05:21:42] 2026-01-09 20:21:11,904 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 05:21:42] 2026-01-09 20:21:11,904 | INFO     | ***************************************
[2026-01-10 05:21:42] 2026-01-09 20:21:11,904 | INFO     | 
[2026-01-10 05:21:42] 2026-01-09 20:21:11,905 | INFO     | architecture information:
[2026-01-10 05:21:42] 2026-01-09 20:21:11,905 | INFO     | executing command: cat /etc/os-release
[2026-01-10 05:21:42] 2026-01-09 20:21:11,913 | INFO     | cat /etc/os-release:
[2026-01-10 05:21:42] NAME="CentOS Linux"
[2026-01-10 05:21:42] VERSION="7 (Core)"
[2026-01-10 05:21:42] ID="centos"
[2026-01-10 05:21:42] ID_LIKE="rhel fedora"
[2026-01-10 05:21:42] VERSION_ID="7"
[2026-01-10 05:21:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 05:21:42] ANSI_COLOR="0;31"
[2026-01-10 05:21:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 05:21:42] HOME_URL="https://www.centos.org/"
[2026-01-10 05:21:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 05:21:42] 
[2026-01-10 05:21:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 05:21:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 05:21:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 05:21:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 05:21:42] 
[2026-01-10 05:21:42] 2026-01-09 20:21:11,913 | INFO     | ***************************************
[2026-01-10 05:21:42] 2026-01-09 20:21:12,415 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2026-01-10 05:21:42] 2026-01-09 20:21:12,423 | INFO     | sufficient remaining disk space (95528419328 B)
[2026-01-10 05:21:42] 2026-01-09 20:21:12,424 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 05:21:42] 2026-01-09 20:21:12,424 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 05:21:42] 2026-01-09 20:21:12,424 | INFO     | update_server=False
[2026-01-10 05:21:42] 2026-01-09 20:21:12,424 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 05:21:42] 2026-01-09 20:21:12,424 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 05:21:42] 2026-01-09 20:21:12,424 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 05:21:42] 2026-01-09 20:21:12,436 | INFO     | all data control threads have been joined
[2026-01-10 05:21:42] 2026-01-09 20:21:12,469 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 05:21:42] 2026-01-09 20:21:12,469 | INFO     | aborting loop
[2026-01-10 05:21:42] 2026-01-09 20:21:12,769 | INFO     | all job control threads have been joined
[2026-01-10 05:21:42] 2026-01-09 20:21:13,361 | INFO     | all payload control threads have been joined
[2026-01-10 05:21:42] 2026-01-09 20:21:13,429 | INFO     | [job] retrieve thread has finished
[2026-01-10 05:21:42] 2026-01-09 20:21:13,430 | INFO     | [job] queue monitor thread has finished
[2026-01-10 05:21:42] 2026-01-09 20:21:13,441 | INFO     | [data] control thread has finished
[2026-01-10 05:21:42] 2026-01-09 20:21:13,474 | INFO     | [job] job monitor thread has finished
[2026-01-10 05:21:42] 2026-01-09 20:21:13,526 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 05:21:42] 2026-01-09 20:21:13,670 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 05:21:42] 2026-01-09 20:21:13,775 | INFO     | [job] control thread has finished
[2026-01-10 05:21:42] 2026-01-09 20:21:13,793 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 05:21:42] 2026-01-09 20:21:13,951 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 05:21:42] 2026-01-09 20:21:14,208 | INFO     | [payload] failed_post thread has finished
[2026-01-10 05:21:42] 2026-01-09 20:21:14,257 | INFO     | [data] copytool_in thread has finished
[2026-01-10 05:21:42] 2026-01-09 20:21:14,268 | INFO     | [job] validate thread has finished
[2026-01-10 05:21:42] 2026-01-09 20:21:14,366 | INFO     | [payload] control thread has finished
[2026-01-10 05:21:42] 2026-01-09 20:21:14,429 | INFO     | [data] copytool_out thread has finished
[2026-01-10 05:21:42] 2026-01-09 20:21:14,469 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 05:21:42] 2026-01-09 20:21:14,907 | INFO     | [payload] validate_post thread has finished
[2026-01-10 05:21:42] 2026-01-09 20:21:17,531 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 05:21:42] 2026-01-09 20:21:37,170 | INFO     | [monitor] cgroup control has ended
[2026-01-10 05:21:42] 2026-01-09 20:21:37,415 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140259972052800)>', '<ExcThread(monitor, started 140259580954368)>']
[2026-01-10 05:21:42] 2026-01-09 20:21:42,216 | INFO     | PID=674757 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 05:21:42] 2026-01-09 20:21:42,216 | INFO     | .. there are 2 such processes running
[2026-01-10 05:21:42] 2026-01-09 20:21:42,217 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 05:21:42] 2026-01-09 20:21:42,217 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 05:21:42] 2026-01-09 20:21:42,217 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 05:21:42] 2026-01-09 20:21:42,217 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 05:21:42] 2026-01-09 20:21:42,217 | INFO     | [monitor] control thread has ended
[2026-01-10 05:21:42] 2026-01-09 20:21:42,440 | INFO     | all workflow threads have been joined
[2026-01-10 05:21:42] 2026-01-09 20:21:42,440 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 05:21:42] 2026-01-09 20:21:42,440 | INFO     | traces error code: 0
[2026-01-10 05:21:42] 2026-01-09 20:21:42,440 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 05:21:42] 2026-01-09 20:21:42,509 [wrapper] ==== pilot stdout END ====
[2026-01-10 05:21:42] 2026-01-09 20:21:42,510 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 05:21:42] 2026-01-09 20:21:42,511 [wrapper] pilotpid: 674757
[2026-01-10 05:21:42] 2026-01-09 20:21:42,513 [wrapper] Pilot exit status: 0
[2026-01-10 05:21:42] 2026-01-09 20:21:42,518 [wrapper] pandaids: 6963189483
[2026-01-10 05:21:42] 2026-01-09 20:21:42,534 [wrapper] cleanup supervisor_pilot  728328 674758
[2026-01-10 05:21:42] 2026-01-09 20:21:42,535 [wrapper] Test setup, not cleaning
[2026-01-10 05:21:42] 2026-01-09 20:21:42,536 [wrapper] apfmon messages muted
[2026-01-10 05:21:42] 2026-01-09 20:21:42,538 [wrapper] ==== wrapper stdout END ====
[2026-01-10 05:21:42] 2026-01-09 20:21:42,539 [wrapper] ==== wrapper stderr END ====
[2026-01-10 05:21:42]  *** Error codes and diagnostics ***
[2026-01-10 05:21:42]     "exeErrorCode": 0,
[2026-01-10 05:21:42]     "exeErrorDiag": "",
[2026-01-10 05:21:42]     "pilotErrorCode": 0,
[2026-01-10 05:21:42]     "pilotErrorDiag": "",
[2026-01-10 05:21:42]  *** Listing of results directory ***
[2026-01-10 05:21:42] total 442080
[2026-01-10 05:21:42] -rw-r--r--. 1 boinc boinc    579449 Jan  9 13:21 pilot3.tar.gz
[2026-01-10 05:21:42] -rwx------. 1 boinc boinc     36322 Jan  9 13:22 runpilot2-wrapper.sh
[2026-01-10 05:21:42] -rw-r--r--. 1 boinc boinc      5112 Jan  9 13:24 queuedata.json
[2026-01-10 05:21:42] -rw-r--r--. 1 boinc boinc       100 Jan 10 03:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 05:21:42] -rwxr-xr-x. 1 boinc boinc      7986 Jan 10 03:02 run_atlas
[2026-01-10 05:21:42] -rw-r--r--. 1 boinc boinc       105 Jan 10 03:02 job.xml
[2026-01-10 05:21:42] -rw-r--r--. 1 boinc boinc      9344 Jan 10 03:02 init_data.xml
[2026-01-10 05:21:42] -rw-r--r--. 2 boinc boinc 222332332 Jan 10 03:02 EVNT.47898824._001473.pool.root.1
[2026-01-10 05:21:42] -rw-r--r--. 2 boinc boinc     15847 Jan 10 03:02 start_atlas.sh
[2026-01-10 05:21:42] drwxrwx--x. 2 boinc boinc        68 Jan 10 03:02 shared
[2026-01-10 05:21:42] -rw-r--r--. 2 boinc boinc    592399 Jan 10 03:02 input.tar.gz
[2026-01-10 05:21:42] -rw-r--r--. 1 boinc boinc         0 Jan 10 03:02 boinc_lockfile
[2026-01-10 05:21:42] -rw-r--r--. 1 boinc boinc      2519 Jan 10 03:02 pandaJob.out
[2026-01-10 05:21:42] -rw-------. 1 boinc boinc    989356 Jan 10 03:02 agis_schedconf.cvmfs.json
[2026-01-10 05:21:42] -rw-------. 1 boinc boinc   1516240 Jan 10 03:02 agis_ddmendpoints.agis.ALL.json
[2026-01-10 05:21:42] drwx------. 5 boinc boinc      4096 Jan 10 03:02 pilot3
[2026-01-10 05:21:42] -rw-------. 1 boinc boinc 223357773 Jan 10 05:20 HITS.47898826._038352.pool.root.1
[2026-01-10 05:21:42] -rw-r--r--. 1 boinc boinc       529 Jan 10 05:20 boinc_task_state.xml
[2026-01-10 05:21:42] -rw-------. 1 boinc boinc      1019 Jan 10 05:20 memory_monitor_summary.json
[2026-01-10 05:21:42] -rw-------. 1 boinc boinc    335817 Jan 10 05:20 log.47898826._038352.job.log.tgz.1
[2026-01-10 05:21:42] -rw-------. 1 boinc boinc      7768 Jan 10 05:21 heartbeat.json
[2026-01-10 05:21:42] -rw-r--r--. 1 boinc boinc      8192 Jan 10 05:21 boinc_mmap_file
[2026-01-10 05:21:42] -rw-r--r--. 1 boinc boinc        27 Jan 10 05:21 wrapper_checkpoint.txt
[2026-01-10 05:21:42] -rw-------. 1 boinc boinc        95 Jan 10 05:21 pilot_heartbeat.json
[2026-01-10 05:21:42] -rw-------. 1 boinc boinc      4822 Jan 10 05:21 pilotlog.txt
[2026-01-10 05:21:42] -rw-------. 1 boinc boinc   1210585 Jan 10 05:21 log.47898826._038352.job.log.1
[2026-01-10 05:21:42] -rw-------. 1 boinc boinc       357 Jan 10 05:21 output.list
[2026-01-10 05:21:42] -rw-r--r--. 1 boinc boinc       620 Jan 10 05:21 runtime_log
[2026-01-10 05:21:42] -rw-------. 1 boinc boinc   1566720 Jan 10 05:21 result.tar.gz
[2026-01-10 05:21:42] -rw-r--r--. 1 boinc boinc      8765 Jan 10 05:21 runtime_log.err
[2026-01-10 05:21:42] -rw-------. 1 boinc boinc       641 Jan 10 05:21 Bk7KDmeCJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmdxgKDmNT6CQn.diag
[2026-01-10 05:21:42] -rw-r--r--. 1 boinc boinc     20922 Jan 10 05:21 stderr.txt
[2026-01-10 05:21:42] HITS file was successfully produced:
[2026-01-10 05:21:42] -rw-------. 1 boinc boinc 223357773 Jan 10 05:20 shared/HITS.pool.root.1
[2026-01-10 05:21:42]  *** Contents of shared directory: ***
[2026-01-10 05:21:42] total 437380
[2026-01-10 05:21:42] -rw-r--r--. 2 boinc boinc 222332332 Jan 10 03:02 ATLAS.root_0
[2026-01-10 05:21:42] -rw-r--r--. 2 boinc boinc     15847 Jan 10 03:02 start_atlas.sh
[2026-01-10 05:21:42] -rw-r--r--. 2 boinc boinc    592399 Jan 10 03:02 input.tar.gz
[2026-01-10 05:21:42] -rw-------. 1 boinc boinc 223357773 Jan 10 05:20 HITS.pool.root.1
[2026-01-10 05:21:42] -rw-------. 1 boinc boinc   1566720 Jan 10 05:21 result.tar.gz
05:21:44 (670978): run_atlas exited; CPU time 46916.007577
05:21:44 (670978): called boinc_finish(0)

</stderr_txt>
]]>

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