Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
01:30:14 (2480773): wrapper (7.7.26015): starting
01:30:14 (2480773): wrapper: running run_atlas (--nthreads 4)
[2026-01-10 01:30:14] Arguments: --nthreads 4
[2026-01-10 01:30:14] Threads: 4
[2026-01-10 01:30:14] Checking for CVMFS
[2026-01-10 01:30:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 01:30:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 01:30:14] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 01:30:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 01:30:14] 2.9.2.0 1623267 3090 92760 154962 0 56 19531508 36864001 0 130560 0 2212063 99.989 120979 6145 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-10 01:30:14] CVMFS is ok
[2026-01-10 01:30:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 01:30:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 01:30:14] Further information can be found at the LHC@home message board.
[2026-01-10 01:30:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 01:30:14] Checking for apptainer binary...
[2026-01-10 01:30:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 01:30:14] Running /usr/bin/apptainer --version
[2026-01-10 01:30:14] apptainer version 1.4.1-1.1
[2026-01-10 01:30:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 01:30:14] thA350a
[2026-01-10 01:30:14] apptainer works
[2026-01-10 01:30:14] Set ATHENA_PROC_NUMBER=4
[2026-01-10 01:30:14] Set ATHENA_CORE_NUMBER=4
[2026-01-10 01:30:14] Starting ATLAS job with PandaID=6963189512
[2026-01-10 01:30:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 03:07:34]  *** The last 200 lines of the pilot log: ***
[2026-01-10 03:07:34]  status=None
[2026-01-10 03:07:34]  status_code=0
[2026-01-10 03:07:34]  storage_token=
[2026-01-10 03:07:34]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6963189512/log.47898826._038381.job.log.tgz.1
[2026-01-10 03:07:34]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/54/6f/log.47898826._038381.job.log.tgz.1
[2026-01-10 03:07:34]  workdir=None
[2026-01-10 03:07:34] ]
[2026-01-10 03:07:34] 2026-01-10 02:06:53,271 | INFO     | transferring file log.47898826._038381.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6963189512/log.47898826._038381.job.log.tgz.1 to /local/data/boinc/
[2026-01-10 03:07:34] 2026-01-10 02:06:53,271 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6963189512/log.47898826._038381.job.log.tgz.1 /local/data/boinc/slots/0/log.47898826._0383
[2026-01-10 03:07:34] 2026-01-10 02:06:53,288 | INFO     | adding to output.list: log.47898826._038381.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/54/6f/log.47898826._038381.job.log.tg
[2026-01-10 03:07:34] 2026-01-10 02:06:53,288 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 03:07:34] 2026-01-10 02:06:53,288 | INFO     | summary of transferred files:
[2026-01-10 03:07:34] 2026-01-10 02:06:53,289 | INFO     |  -- lfn=log.47898826._038381.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 03:07:34] 2026-01-10 02:06:53,289 | INFO     | stage-out finished correctly
[2026-01-10 03:07:34] 2026-01-10 02:06:53,428 | INFO     | time since job start (5791s) is within the limit (349056.0s)
[2026-01-10 03:07:34] 2026-01-10 02:06:54,486 | INFO     | PID=2484567 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 03:07:34] 2026-01-10 02:06:54,741 | WARNING  | process 2491133 can no longer be monitored (due to stat problems) - aborting
[2026-01-10 03:07:34] 2026-01-10 02:06:54,741 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6963189512/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 03:07:34] 2026-01-10 02:06:54,778 | INFO     | number of running child processes to parent process 2491133: 1
[2026-01-10 03:07:34] 2026-01-10 02:06:54,778 | INFO     | maximum number of monitored processes: 6
[2026-01-10 03:07:34] 2026-01-10 02:06:55,025 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 03:07:34] 2026-01-10 02:06:55,487 | INFO     | time since job start (5793s) is within the limit (349056.0s)
[2026-01-10 03:07:34] 2026-01-10 02:06:56,122 | INFO     | job 6963189512 has state=finished
[2026-01-10 03:07:34] 2026-01-10 02:06:56,122 | INFO     | preparing for final server update for job 6963189512 in state='finished'
[2026-01-10 03:07:34] 2026-01-10 02:06:56,702 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-10 03:07:34] 2026-01-10 02:06:56,702 | INFO     | this job has now completed (state=finished)
[2026-01-10 03:07:34] 2026-01-10 02:06:56,702 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 03:07:34] 2026-01-10 02:06:56,702 | INFO     | log transfer has been attempted: DONE
[2026-01-10 03:07:34] 2026-01-10 02:06:56,702 | INFO     | job 6963189512 has finished - writing final server update
[2026-01-10 03:07:34] 2026-01-10 02:06:56,703 | INFO     | total number of processed events: 400 (read)
[2026-01-10 03:07:34] 2026-01-10 02:06:56,703 | INFO     | executing command: lscpu
[2026-01-10 03:07:34] 2026-01-10 02:06:56,722 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 03:07:34] 2026-01-10 02:06:57,280 | INFO     | monitor loop #444: job 0:6963189512 is in state 'finished'
[2026-01-10 03:07:34] 2026-01-10 02:06:57,280 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 03:07:34] 2026-01-10 02:06:57,493 | INFO     | time since job start (5795s) is within the limit (349056.0s)
[2026-01-10 03:07:34] 2026-01-10 02:06:59,498 | INFO     | time since job start (5797s) is within the limit (349056.0s)
[2026-01-10 03:07:34] 2026-01-10 02:06:59,783 | INFO     | monitor loop #445: job 0:6963189512 is in state 'finished'
[2026-01-10 03:07:34] 2026-01-10 02:06:59,783 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 03:07:34] 2026-01-10 02:07:00,502 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 03:07:34] 2026-01-10 02:07:00,504 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3595.2664999999997
[2026-01-10 03:07:34] 2026-01-10 02:07:00,505 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6963189512/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 03:07:34] 2026-01-10 02:07:00,505 | INFO     | extracted standard info from prmon json
[2026-01-10 03:07:34] 2026-01-10 02:07:00,505 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 03:07:34] 2026-01-10 02:07:00,505 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 03:07:34] 2026-01-10 02:07:00,505 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 03:07:34] 2026-01-10 02:07:00,505 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 03:07:34] 2026-01-10 02:07:00,506 | INFO     | fitting pss+swap vs Time
[2026-01-10 03:07:34] 2026-01-10 02:07:00,506 | INFO     | sum of square deviations: 211285822.0
[2026-01-10 03:07:34] 2026-01-10 02:07:00,507 | INFO     | sum of deviations: -16830878958.5
[2026-01-10 03:07:34] 2026-01-10 02:07:00,507 | INFO     | mean x: 1768008002.5
[2026-01-10 03:07:34] 2026-01-10 02:07:00,507 | INFO     | mean y: 2531481.4431818184
[2026-01-10 03:07:34] 2026-01-10 02:07:00,507 | INFO     | intersect: 140840796946.01782
[2026-01-10 03:07:34] 2026-01-10 02:07:00,507 | INFO     | chi2: 0.09704443416849637
[2026-01-10 03:07:34] 2026-01-10 02:07:00,507 | INFO     | current memory leak: -79.66 B/s (using 88 data points, chi2=0.10)
[2026-01-10 03:07:34] 2026-01-10 02:07:00,507 | INFO     | could have reported an average CPU frequency of 3759 MHz (7 samples)
[2026-01-10 03:07:34] 2026-01-10 02:07:00,507 | INFO     | ..............................
[2026-01-10 03:07:34] 2026-01-10 02:07:00,507 | INFO     | . Timing measurements:
[2026-01-10 03:07:34] 2026-01-10 02:07:00,507 | INFO     | . get job = 0 s
[2026-01-10 03:07:34] 2026-01-10 02:07:00,507 | INFO     | . initial setup = 1 s
[2026-01-10 03:07:34] 2026-01-10 02:07:00,507 | INFO     | . payload setup = 3 s
[2026-01-10 03:07:34] 2026-01-10 02:07:00,507 | INFO     | . stage-in = 0 s
[2026-01-10 03:07:34] 2026-01-10 02:07:00,507 | INFO     | . payload execution = 5769 s
[2026-01-10 03:07:34] 2026-01-10 02:07:00,507 | INFO     | . stage-out = 0 s
[2026-01-10 03:07:34] 2026-01-10 02:07:00,507 | INFO     | . log creation = 0 s
[2026-01-10 03:07:34] 2026-01-10 02:07:00,507 | INFO     | ..............................
[2026-01-10 03:07:34] 2026-01-10 02:07:00,862 | INFO     | 
[2026-01-10 03:07:34] 2026-01-10 02:07:00,863 | INFO     | job summary report
[2026-01-10 03:07:34] 2026-01-10 02:07:00,863 | INFO     | --------------------------------------------------
[2026-01-10 03:07:34] 2026-01-10 02:07:00,863 | INFO     | PanDA job id: 6963189512
[2026-01-10 03:07:34] 2026-01-10 02:07:00,863 | INFO     | task id: 47898826
[2026-01-10 03:07:34] 2026-01-10 02:07:00,863 | INFO     | errors: (none)
[2026-01-10 03:07:34] 2026-01-10 02:07:00,863 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 03:07:34] 2026-01-10 02:07:00,863 | INFO     | pilot state: finished 
[2026-01-10 03:07:34] 2026-01-10 02:07:00,863 | INFO     | transexitcode: 0
[2026-01-10 03:07:34] 2026-01-10 02:07:00,863 | INFO     | exeerrorcode: 0
[2026-01-10 03:07:34] 2026-01-10 02:07:00,863 | INFO     | exeerrordiag: 
[2026-01-10 03:07:34] 2026-01-10 02:07:00,863 | INFO     | exitcode: 0
[2026-01-10 03:07:34] 2026-01-10 02:07:00,863 | INFO     | exitmsg: OK
[2026-01-10 03:07:34] 2026-01-10 02:07:00,863 | INFO     | cpuconsumptiontime: 22061 s
[2026-01-10 03:07:34] 2026-01-10 02:07:00,863 | INFO     | nevents: 400
[2026-01-10 03:07:34] 2026-01-10 02:07:00,863 | INFO     | neventsw: 0
[2026-01-10 03:07:34] 2026-01-10 02:07:00,863 | INFO     | pid: 2491133
[2026-01-10 03:07:34] 2026-01-10 02:07:00,863 | INFO     | pgrp: 2491133
[2026-01-10 03:07:34] 2026-01-10 02:07:00,863 | INFO     | corecount: 4
[2026-01-10 03:07:34] 2026-01-10 02:07:00,863 | INFO     | event service: False
[2026-01-10 03:07:34] 2026-01-10 02:07:00,863 | INFO     | sizes: {0: 2283974, 3: 2284236, 11: 2284264, 5776: 2311096, 5777: 2320100, 5779: 2320156, 5784: 2320478}
[2026-01-10 03:07:34] 2026-01-10 02:07:00,863 | INFO     | --------------------------------------------------
[2026-01-10 03:07:34] 2026-01-10 02:07:00,863 | INFO     | 
[2026-01-10 03:07:34] 2026-01-10 02:07:00,863 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-01-10 03:07:34] 2026-01-10 02:07:00,881 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 03:07:34] 2026-01-10 02:07:00,882 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 03:07:34] 2026-01-10 02:07:00,882 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 03:07:34] 2026-01-10 02:07:00,882 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 03:07:34] 2026-01-10 02:07:00,882 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 03:07:34] 2026-01-10 02:07:00,882 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 03:07:34] 2026-01-10 02:07:00,882 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 03:07:34] 2026-01-10 02:07:00,882 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 03:07:34] 2026-01-10 02:07:00,882 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 03:07:34] 2026-01-10 02:07:00,882 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 03:07:34] 2026-01-10 02:07:00,882 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 03:07:34] 2026-01-10 02:07:00,882 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 03:07:34] 2026-01-10 02:07:00,882 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 03:07:34] 2026-01-10 02:07:00,882 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 03:07:34] 2026-01-10 02:07:00,882 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 03:07:34] 2026-01-10 02:07:00,882 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 03:07:34] 2026-01-10 02:07:00,882 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 03:07:34] 2026-01-10 02:07:00,882 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 03:07:34] 2026-01-10 02:07:00,882 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 03:07:34] 2026-01-10 02:07:00,882 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 03:07:34] 2026-01-10 02:07:00,882 | INFO     | job 6963189512 has completed (purged errors)
[2026-01-10 03:07:34] 2026-01-10 02:07:00,882 | INFO     | overall cleanup function is called
[2026-01-10 03:07:34] 2026-01-10 02:07:01,889 | INFO     | --- collectZombieJob: --- 10, [2491133]
[2026-01-10 03:07:34] 2026-01-10 02:07:01,889 | INFO     | zombie collector waiting for pid 2491133
[2026-01-10 03:07:34] 2026-01-10 02:07:01,889 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 03:07:34] 2026-01-10 02:07:01,889 | INFO     | collected zombie processes
[2026-01-10 03:07:34] 2026-01-10 02:07:01,890 | INFO     | will attempt to kill all subprocesses of pid=2491133
[2026-01-10 03:07:34] 2026-01-10 02:07:01,930 | INFO     | process IDs to be killed: [2491133] (in reverse order)
[2026-01-10 03:07:34] 2026-01-10 02:07:01,959 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 03:07:34] 2026-01-10 02:07:01,960 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 03:07:34] 2026-01-10 02:07:01,961 | INFO     | did not find any defunct processes belonging to 2491133
[2026-01-10 03:07:34] 2026-01-10 02:07:01,962 | INFO     | did not find any defunct processes belonging to 2491133
[2026-01-10 03:07:34] 2026-01-10 02:07:01,962 | INFO     | ready for new job
[2026-01-10 03:07:34] 2026-01-10 02:07:01,962 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 03:07:34] 2026-01-10 02:07:01,963 | INFO     | ***************************************
[2026-01-10 03:07:34] 2026-01-10 02:07:01,963 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 03:07:34] 2026-01-10 02:07:01,963 | INFO     | ***************************************
[2026-01-10 03:07:34] 2026-01-10 02:07:01,963 | INFO     | 
[2026-01-10 03:07:34] 2026-01-10 02:07:01,964 | INFO     | architecture information:
[2026-01-10 03:07:34] 2026-01-10 02:07:01,964 | INFO     | executing command: cat /etc/os-release
[2026-01-10 03:07:34] 2026-01-10 02:07:01,977 | INFO     | cat /etc/os-release:
[2026-01-10 03:07:34] NAME="CentOS Linux"
[2026-01-10 03:07:34] VERSION="7 (Core)"
[2026-01-10 03:07:34] ID="centos"
[2026-01-10 03:07:34] ID_LIKE="rhel fedora"
[2026-01-10 03:07:34] VERSION_ID="7"
[2026-01-10 03:07:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 03:07:34] ANSI_COLOR="0;31"
[2026-01-10 03:07:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 03:07:34] HOME_URL="https://www.centos.org/"
[2026-01-10 03:07:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 03:07:34] 
[2026-01-10 03:07:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 03:07:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 03:07:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 03:07:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 03:07:34] 
[2026-01-10 03:07:34] 2026-01-10 02:07:01,977 | INFO     | ***************************************
[2026-01-10 03:07:34] 2026-01-10 02:07:02,480 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-10 03:07:34] 2026-01-10 02:07:02,497 | INFO     | sufficient remaining disk space (239278751744 B)
[2026-01-10 03:07:34] 2026-01-10 02:07:02,497 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 03:07:34] 2026-01-10 02:07:02,497 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 03:07:34] 2026-01-10 02:07:02,497 | INFO     | update_server=False
[2026-01-10 03:07:34] 2026-01-10 02:07:02,497 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 03:07:34] 2026-01-10 02:07:02,497 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 03:07:34] 2026-01-10 02:07:02,648 | INFO     | all payload control threads have been joined
[2026-01-10 03:07:34] 2026-01-10 02:07:02,797 | INFO     | all data control threads have been joined
[2026-01-10 03:07:34] 2026-01-10 02:07:03,293 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 03:07:34] 2026-01-10 02:07:03,293 | INFO     | aborting loop
[2026-01-10 03:07:34] 2026-01-10 02:07:03,503 | INFO     | [job] retrieve thread has finished
[2026-01-10 03:07:34] 2026-01-10 02:07:03,503 | INFO     | [job] queue monitor thread has finished
[2026-01-10 03:07:34] 2026-01-10 02:07:03,556 | INFO     | [payload] validate_post thread has finished
[2026-01-10 03:07:34] 2026-01-10 02:07:03,626 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 03:07:34] 2026-01-10 02:07:03,654 | INFO     | [payload] control thread has finished
[2026-01-10 03:07:34] 2026-01-10 02:07:03,694 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 03:07:34] 2026-01-10 02:07:03,802 | INFO     | [data] control thread has finished
[2026-01-10 03:07:34] 2026-01-10 02:07:03,843 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 03:07:34] 2026-01-10 02:07:03,900 | INFO     | [data] copytool_in thread has finished
[2026-01-10 03:07:34] 2026-01-10 02:07:04,104 | INFO     | all job control threads have been joined
[2026-01-10 03:07:34] 2026-01-10 02:07:04,299 | INFO     | [job] job monitor thread has finished
[2026-01-10 03:07:34] 2026-01-10 02:07:04,415 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 03:07:34] 2026-01-10 02:07:04,607 | INFO     | [payload] failed_post thread has finished
[2026-01-10 03:07:34] 2026-01-10 02:07:04,982 | INFO     | [job] validate thread has finished
[2026-01-10 03:07:34] 2026-01-10 02:07:05,110 | INFO     | [job] control thread has finished
[2026-01-10 03:07:34] 2026-01-10 02:07:05,577 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 03:07:34] 2026-01-10 02:07:05,849 | INFO     | [data] copytool_out thread has finished
[2026-01-10 03:07:34] 2026-01-10 02:07:09,584 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 03:07:34] 2026-01-10 02:07:12,970 | INFO     | job.realtimelogging is not enabled
[2026-01-10 03:07:34] 2026-01-10 02:07:13,976 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 03:07:34] 2026-01-10 02:07:29,190 | INFO     | [monitor] cgroup control has ended
[2026-01-10 03:07:34] 2026-01-10 02:07:29,379 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140692426340160)>', '<ExcThread(monitor, started 140691703322368)>']
[2026-01-10 03:07:34] 2026-01-10 02:07:32,611 | INFO     | PID=2484567 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 03:07:34] 2026-01-10 02:07:32,611 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 03:07:34] 2026-01-10 02:07:32,611 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 03:07:34] 2026-01-10 02:07:32,611 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 03:07:34] 2026-01-10 02:07:32,611 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 03:07:34] 2026-01-10 02:07:32,611 | INFO     | [monitor] control thread has ended
[2026-01-10 03:07:34] 2026-01-10 02:07:34,405 | INFO     | all workflow threads have been joined
[2026-01-10 03:07:34] 2026-01-10 02:07:34,405 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 03:07:34] 2026-01-10 02:07:34,405 | INFO     | traces error code: 0
[2026-01-10 03:07:34] 2026-01-10 02:07:34,405 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 03:07:34] 2026-01-10 02:07:34,484 [wrapper] ==== pilot stdout END ====
[2026-01-10 03:07:34] 2026-01-10 02:07:34,488 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 03:07:34] 2026-01-10 02:07:34,492 [wrapper] pilotpid: 2484567
[2026-01-10 03:07:34] 2026-01-10 02:07:34,496 [wrapper] Pilot exit status: 0
[2026-01-10 03:07:34] 2026-01-10 02:07:34,507 [wrapper] pandaids: 6963189512
[2026-01-10 03:07:34] 2026-01-10 02:07:34,528 [wrapper] cleanup supervisor_pilot 2503316 2484568
[2026-01-10 03:07:34] 2026-01-10 02:07:34,531 [wrapper] Test setup, not cleaning
[2026-01-10 03:07:34] 2026-01-10 02:07:34,535 [wrapper] apfmon messages muted
[2026-01-10 03:07:34] 2026-01-10 02:07:34,539 [wrapper] ==== wrapper stdout END ====
[2026-01-10 03:07:34] 2026-01-10 02:07:34,543 [wrapper] ==== wrapper stderr END ====
[2026-01-10 03:07:34]  *** Error codes and diagnostics ***
[2026-01-10 03:07:34]     "exeErrorCode": 0,
[2026-01-10 03:07:34]     "exeErrorDiag": "",
[2026-01-10 03:07:34]     "pilotErrorCode": 0,
[2026-01-10 03:07:34]     "pilotErrorDiag": "",
[2026-01-10 03:07:34]  *** Listing of results directory ***
[2026-01-10 03:07:34] total 435004
[2026-01-10 03:07:34] -rw-r--r-- 1 boinc boinc      5112 Jan  9 05:21 queuedata.json
[2026-01-10 03:07:34] -rw-r--r-- 1 boinc boinc    579449 Jan  9 05:21 pilot3.tar.gz
[2026-01-10 03:07:34] -rwx------ 1 boinc boinc     36322 Jan  9 05:22 runpilot2-wrapper.sh
[2026-01-10 03:07:34] -rw-r--r-- 1 boinc boinc       100 Jan 10 01:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 03:07:34] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 01:30 run_atlas
[2026-01-10 03:07:34] -rw-r--r-- 1 boinc boinc       105 Jan 10 01:30 job.xml
[2026-01-10 03:07:34] -rw-r--r-- 2 boinc boinc 223725975 Jan 10 01:30 EVNT.47898824._001474.pool.root.1
[2026-01-10 03:07:34] -rw-r--r-- 2 boinc boinc    592398 Jan 10 01:30 input.tar.gz
[2026-01-10 03:07:34] -rw-r--r-- 2 boinc boinc     15847 Jan 10 01:30 start_atlas.sh
[2026-01-10 03:07:34] drwxrwx--x 2 boinc boinc      4096 Jan 10 01:30 shared
[2026-01-10 03:07:34] -rw-r--r-- 1 boinc boinc         0 Jan 10 01:30 boinc_setup_complete
[2026-01-10 03:07:34] -rw-r--r-- 1 boinc boinc      6377 Jan 10 01:30 init_data.xml
[2026-01-10 03:07:34] -rw-r--r-- 1 boinc boinc         0 Jan 10 01:30 boinc_lockfile
[2026-01-10 03:07:34] -rw-r--r-- 1 boinc boinc      2520 Jan 10 01:30 pandaJob.out
[2026-01-10 03:07:34] -rw------- 1 boinc boinc    989374 Jan 10 01:30 agis_schedconf.cvmfs.json
[2026-01-10 03:07:34] -rw------- 1 boinc boinc   1516240 Jan 10 01:30 agis_ddmendpoints.agis.ALL.json
[2026-01-10 03:07:34] drwx------ 5 boinc boinc      4096 Jan 10 01:30 pilot3
[2026-01-10 03:07:34] -rw------- 1 boinc boinc 215568244 Jan 10 03:06 HITS.47898826._038381.pool.root.1
[2026-01-10 03:07:34] -rw-r--r-- 1 boinc boinc       529 Jan 10 03:06 boinc_task_state.xml
[2026-01-10 03:07:34] -rw------- 1 boinc boinc      1016 Jan 10 03:06 memory_monitor_summary.json
[2026-01-10 03:07:34] -rw------- 1 boinc boinc        95 Jan 10 03:06 pilot_heartbeat.json
[2026-01-10 03:07:34] -rw------- 1 boinc boinc    273343 Jan 10 03:06 log.47898826._038381.job.log.tgz.1
[2026-01-10 03:07:34] -rw------- 1 boinc boinc      7759 Jan 10 03:07 heartbeat.json
[2026-01-10 03:07:34] -rw-r--r-- 1 boinc boinc      8192 Jan 10 03:07 boinc_mmap_file
[2026-01-10 03:07:34] -rw-r--r-- 1 boinc boinc        27 Jan 10 03:07 wrapper_checkpoint.txt
[2026-01-10 03:07:34] -rw------- 1 boinc boinc      4824 Jan 10 03:07 pilotlog.txt
[2026-01-10 03:07:34] -rw------- 1 boinc boinc    844103 Jan 10 03:07 log.47898826._038381.job.log.1
[2026-01-10 03:07:34] -rw------- 1 boinc boinc       357 Jan 10 03:07 output.list
[2026-01-10 03:07:34] -rw-r--r-- 1 boinc boinc       620 Jan 10 03:07 runtime_log
[2026-01-10 03:07:34] -rw------- 1 boinc boinc   1136640 Jan 10 03:07 result.tar.gz
[2026-01-10 03:07:34] -rw-r--r-- 1 boinc boinc      8902 Jan 10 03:07 runtime_log.err
[2026-01-10 03:07:34] -rw------- 1 boinc boinc       660 Jan 10 03:07 etHODmQCJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDma9lKDm03uZUo.diag
[2026-01-10 03:07:34] -rw-r--r-- 1 boinc boinc     22176 Jan 10 03:07 stderr.txt
[2026-01-10 03:07:34] HITS file was successfully produced:
[2026-01-10 03:07:34] -rw------- 1 boinc boinc 215568244 Jan 10 03:06 shared/HITS.pool.root.1
[2026-01-10 03:07:34]  *** Contents of shared directory: ***
[2026-01-10 03:07:34] total 430716
[2026-01-10 03:07:34] -rw-r--r-- 2 boinc boinc 223725975 Jan 10 01:30 ATLAS.root_0
[2026-01-10 03:07:34] -rw-r--r-- 2 boinc boinc    592398 Jan 10 01:30 input.tar.gz
[2026-01-10 03:07:34] -rw-r--r-- 2 boinc boinc     15847 Jan 10 01:30 start_atlas.sh
[2026-01-10 03:07:34] -rw------- 1 boinc boinc 215568244 Jan 10 03:06 HITS.pool.root.1
[2026-01-10 03:07:34] -rw------- 1 boinc boinc   1136640 Jan 10 03:07 result.tar.gz
03:07:35 (2480773): run_atlas exited; CPU time 22079.111144
03:07:35 (2480773): called boinc_finish(0)

</stderr_txt>
]]>

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