Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:39:16 (8661): wrapper (7.7.26015): starting
05:39:16 (8661): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 05:39:16] Arguments: --nthreads 8
[2026-01-09 05:39:16] Threads: 8
[2026-01-09 05:39:16] Checking for CVMFS
[2026-01-09 05:39:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 05:39:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 05:39:17] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 05:39:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 05:39:17] 2.11.2.0 2878 120748 76840 154940 2 56 12034483 20275200 1 130560 0 26348489 99.793 7480068 33557 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 05:39:17] CVMFS is ok
[2026-01-09 05:39:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 05:39:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 05:39:17] Further information can be found at the LHC@home message board.
[2026-01-09 05:39:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 05:39:17] Checking for apptainer binary...
[2026-01-09 05:39:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 05:39:17] Running /usr/bin/apptainer --version
[2026-01-09 05:39:17] apptainer version 1.3.2-1.el7
[2026-01-09 05:39:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 05:39:19] c-204-27.aglt2.org
[2026-01-09 05:39:19] apptainer works
[2026-01-09 05:39:19] Set ATHENA_PROC_NUMBER=8
[2026-01-09 05:39:19] Set ATHENA_CORE_NUMBER=8
[2026-01-09 05:39:19] Starting ATLAS job with PandaID=6963190128
[2026-01-09 05:39:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 08:30:22]  *** The last 200 lines of the pilot log: ***
[2026-01-09 08:30:22] 2026-01-09 13:29:45,074 | INFO     | time since job start (10209s) is within the limit (349056.0s)
[2026-01-09 08:30:22] 2026-01-09 13:29:47,075 | INFO     | time since job start (10211s) is within the limit (349056.0s)
[2026-01-09 08:30:22] 2026-01-09 13:29:47,492 | INFO     | monitor loop #752: job 0:6963190128 is in state 'finished'
[2026-01-09 08:30:22] 2026-01-09 13:29:47,492 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 08:30:22] 2026-01-09 13:29:49,081 | INFO     | time since job start (10213s) is within the limit (349056.0s)
[2026-01-09 08:30:22] 2026-01-09 13:29:50,000 | INFO     | monitor loop #753: job 0:6963190128 is in state 'finished'
[2026-01-09 08:30:22] 2026-01-09 13:29:50,000 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 08:30:22] 2026-01-09 13:29:50,133 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 08:30:22] 2026-01-09 13:29:50,137 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.75
[2026-01-09 08:30:22] 2026-01-09 13:29:50,139 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963190128/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 08:30:22] 2026-01-09 13:29:50,141 | INFO     | extracted standard info from prmon json
[2026-01-09 08:30:22] 2026-01-09 13:29:50,141 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 08:30:22] 2026-01-09 13:29:50,141 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 08:30:22] 2026-01-09 13:29:50,142 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 08:30:22] 2026-01-09 13:29:50,142 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 08:30:22] 2026-01-09 13:29:50,146 | INFO     | fitting pss+swap vs Time
[2026-01-09 08:30:22] 2026-01-09 13:29:50,146 | INFO     | sum of square deviations: 1444149868.0
[2026-01-09 08:30:22] 2026-01-09 13:29:50,147 | INFO     | sum of deviations: 4913542252.999994
[2026-01-09 08:30:22] 2026-01-09 13:29:50,147 | INFO     | mean x: 1767960271.0
[2026-01-09 08:30:22] 2026-01-09 13:29:50,147 | INFO     | mean y: 2513997.748502994
[2026-01-09 08:30:22] 2026-01-09 13:29:50,148 | INFO     | intersect: -6012753313.2642765
[2026-01-09 08:30:22] 2026-01-09 13:29:50,148 | INFO     | chi2: 1.5713470227795467
[2026-01-09 08:30:22] 2026-01-09 13:29:50,148 | INFO     | sum of square deviations: 1318277740.5
[2026-01-09 08:30:22] 2026-01-09 13:29:50,149 | INFO     | sum of deviations: 4784126879.500013
[2026-01-09 08:30:22] 2026-01-09 13:29:50,149 | INFO     | mean x: 1767960118.5
[2026-01-09 08:30:22] 2026-01-09 13:29:50,149 | INFO     | mean y: 2513840.9320987654
[2026-01-09 08:30:22] 2026-01-09 13:29:50,150 | INFO     | intersect: -6413543462.433921
[2026-01-09 08:30:22] 2026-01-09 13:29:50,150 | INFO     | chi2: 1.572102674117847
[2026-01-09 08:30:22] 2026-01-09 13:29:50,150 | INFO     | current chi2=1.572102674117847 (change=-0.04808939892625231 %)
[2026-01-09 08:30:22] 2026-01-09 13:29:50,150 | INFO     | right removable region: 161
[2026-01-09 08:30:22] 2026-01-09 13:29:50,150 | INFO     | sum of square deviations: 1318277740.5
[2026-01-09 08:30:22] 2026-01-09 13:29:50,151 | INFO     | sum of deviations: -19405347114.5
[2026-01-09 08:30:22] 2026-01-09 13:29:50,151 | INFO     | mean x: 1767960423.5
[2026-01-09 08:30:22] 2026-01-09 13:29:50,151 | INFO     | mean y: 2543038.9444444445
[2026-01-09 08:30:22] 2026-01-09 13:29:50,152 | INFO     | intersect: 26027321163.244358
[2026-01-09 08:30:22] 2026-01-09 13:29:50,152 | INFO     | chi2: 0.1598310266186093
[2026-01-09 08:30:22] 2026-01-09 13:29:50,152 | INFO     | current chi2=0.1598310266186093 (change=89.82840681901791 %)
[2026-01-09 08:30:22] 2026-01-09 13:29:50,152 | INFO     | sum of square deviations: 1199940638.0
[2026-01-09 08:30:22] 2026-01-09 13:29:50,153 | INFO     | sum of deviations: -19458292217.0
[2026-01-09 08:30:22] 2026-01-09 13:29:50,153 | INFO     | mean x: 1767960576.0
[2026-01-09 08:30:22] 2026-01-09 13:29:50,153 | INFO     | mean y: 2543038.27388535
[2026-01-09 08:30:22] 2026-01-09 13:29:50,153 | INFO     | intersect: 28671872525.507767
[2026-01-09 08:30:22] 2026-01-09 13:29:50,154 | INFO     | chi2: 0.14052624011796316
[2026-01-09 08:30:22] 2026-01-09 13:29:50,154 | INFO     | current chi2=0.14052624011796316 (change=12.07824720209765 %)
[2026-01-09 08:30:22] 2026-01-09 13:29:50,154 | INFO     | left removable region: 20
[2026-01-09 08:30:22] 2026-01-09 13:29:50,154 | INFO     | sum of square deviations: 869188390.0
[2026-01-09 08:30:22] 2026-01-09 13:29:50,155 | INFO     | sum of deviations: -8501281897.0
[2026-01-09 08:30:22] 2026-01-09 13:29:50,155 | INFO     | mean x: 1767960698.0
[2026-01-09 08:30:22] 2026-01-09 13:29:50,155 | INFO     | mean y: 2528139.1276595746
[2026-01-09 08:30:22] 2026-01-09 13:29:50,155 | INFO     | intersect: 17294443734.68098
[2026-01-09 08:30:22] 2026-01-09 13:29:50,156 | INFO     | chi2: 0.0967818934487147
[2026-01-09 08:30:22] 2026-01-09 13:29:50,156 | INFO     | current memory leak: -9.78 B/s (using 141 data points, chi2=0.10)
[2026-01-09 08:30:22] 2026-01-09 13:29:50,156 | INFO     | could have reported an average CPU frequency of 2015 MHz (9 samples)
[2026-01-09 08:30:22] 2026-01-09 13:29:50,156 | INFO     | ..............................
[2026-01-09 08:30:22] 2026-01-09 13:29:50,156 | INFO     | . Timing measurements:
[2026-01-09 08:30:22] 2026-01-09 13:29:50,157 | INFO     | . get job = 0 s
[2026-01-09 08:30:22] 2026-01-09 13:29:50,157 | INFO     | . initial setup = 2 s
[2026-01-09 08:30:22] 2026-01-09 13:29:50,157 | INFO     | . payload setup = 8 s
[2026-01-09 08:30:22] 2026-01-09 13:29:50,157 | INFO     | . stage-in = 0 s
[2026-01-09 08:30:22] 2026-01-09 13:29:50,157 | INFO     | . payload execution = 10171 s
[2026-01-09 08:30:22] 2026-01-09 13:29:50,157 | INFO     | . stage-out = 0 s
[2026-01-09 08:30:22] 2026-01-09 13:29:50,157 | INFO     | . log creation = 0 s
[2026-01-09 08:30:22] 2026-01-09 13:29:50,157 | INFO     | ..............................
[2026-01-09 08:30:22] 2026-01-09 13:29:50,250 | INFO     | 
[2026-01-09 08:30:22] 2026-01-09 13:29:50,250 | INFO     | job summary report
[2026-01-09 08:30:22] 2026-01-09 13:29:50,250 | INFO     | --------------------------------------------------
[2026-01-09 08:30:22] 2026-01-09 13:29:50,250 | INFO     | PanDA job id: 6963190128
[2026-01-09 08:30:22] 2026-01-09 13:29:50,251 | INFO     | task id: 47898826
[2026-01-09 08:30:22] 2026-01-09 13:29:50,251 | INFO     | errors: (none)
[2026-01-09 08:30:22] 2026-01-09 13:29:50,251 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 08:30:22] 2026-01-09 13:29:50,251 | INFO     | pilot state: finished 
[2026-01-09 08:30:22] 2026-01-09 13:29:50,251 | INFO     | transexitcode: 0
[2026-01-09 08:30:22] 2026-01-09 13:29:50,251 | INFO     | exeerrorcode: 0
[2026-01-09 08:30:22] 2026-01-09 13:29:50,252 | INFO     | exeerrordiag: 
[2026-01-09 08:30:22] 2026-01-09 13:29:50,252 | INFO     | exitcode: 0
[2026-01-09 08:30:22] 2026-01-09 13:29:50,252 | INFO     | exitmsg: OK
[2026-01-09 08:30:22] 2026-01-09 13:29:50,252 | INFO     | cpuconsumptiontime: 76691 s
[2026-01-09 08:30:22] 2026-01-09 13:29:50,252 | INFO     | nevents: 400
[2026-01-09 08:30:22] 2026-01-09 13:29:50,253 | INFO     | neventsw: 0
[2026-01-09 08:30:22] 2026-01-09 13:29:50,253 | INFO     | pid: 18940
[2026-01-09 08:30:22] 2026-01-09 13:29:50,253 | INFO     | pgrp: 18940
[2026-01-09 08:30:22] 2026-01-09 13:29:50,253 | INFO     | corecount: 8
[2026-01-09 08:30:22] 2026-01-09 13:29:50,253 | INFO     | event service: False
[2026-01-09 08:30:22] 2026-01-09 13:29:50,253 | INFO     | sizes: {0: 2283800, 1: 2283999, 6: 2284261, 11: 2284289, 10183: 2312907, 10184: 2312906, 10186: 2322088, 10188: 2322144, 10196: 2322402}
[2026-01-09 08:30:22] 2026-01-09 13:29:50,253 | INFO     | --------------------------------------------------
[2026-01-09 08:30:22] 2026-01-09 13:29:50,253 | INFO     | 
[2026-01-09 08:30:22] 2026-01-09 13:29:50,254 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 08:30:22] 2026-01-09 13:29:50,282 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 08:30:22] 2026-01-09 13:29:50,282 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 08:30:22] 2026-01-09 13:29:50,283 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 08:30:22] 2026-01-09 13:29:50,283 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 08:30:22] 2026-01-09 13:29:50,283 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 08:30:22] 2026-01-09 13:29:50,283 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 08:30:22] 2026-01-09 13:29:50,283 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 08:30:22] 2026-01-09 13:29:50,284 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 08:30:22] 2026-01-09 13:29:50,284 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 08:30:22] 2026-01-09 13:29:50,284 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 08:30:22] 2026-01-09 13:29:50,284 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 08:30:22] 2026-01-09 13:29:50,284 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 08:30:22] 2026-01-09 13:29:50,285 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 08:30:22] 2026-01-09 13:29:50,285 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 08:30:22] 2026-01-09 13:29:50,285 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 08:30:22] 2026-01-09 13:29:50,285 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 08:30:22] 2026-01-09 13:29:50,285 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 08:30:22] 2026-01-09 13:29:50,285 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 08:30:22] 2026-01-09 13:29:50,285 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 08:30:22] 2026-01-09 13:29:50,286 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 08:30:22] 2026-01-09 13:29:50,286 | INFO     | job 6963190128 has completed (purged errors)
[2026-01-09 08:30:22] 2026-01-09 13:29:50,286 | INFO     | overall cleanup function is called
[2026-01-09 08:30:22] 2026-01-09 13:29:51,294 | INFO     | --- collectZombieJob: --- 10, [18940]
[2026-01-09 08:30:22] 2026-01-09 13:29:51,295 | INFO     | zombie collector waiting for pid 18940
[2026-01-09 08:30:22] 2026-01-09 13:29:51,295 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 08:30:22] 2026-01-09 13:29:51,295 | INFO     | collected zombie processes
[2026-01-09 08:30:22] 2026-01-09 13:29:51,295 | INFO     | will attempt to kill all subprocesses of pid=18940
[2026-01-09 08:30:22] 2026-01-09 13:29:51,386 | INFO     | process IDs to be killed: [18940] (in reverse order)
[2026-01-09 08:30:22] 2026-01-09 13:29:51,446 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 08:30:22] 2026-01-09 13:29:51,447 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 08:30:22] 2026-01-09 13:29:51,451 | INFO     | did not find any defunct processes belonging to 18940
[2026-01-09 08:30:22] 2026-01-09 13:29:51,454 | INFO     | did not find any defunct processes belonging to 18940
[2026-01-09 08:30:22] 2026-01-09 13:29:51,455 | INFO     | ready for new job
[2026-01-09 08:30:22] 2026-01-09 13:29:51,455 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 08:30:22] 2026-01-09 13:29:51,457 | INFO     | ***************************************
[2026-01-09 08:30:22] 2026-01-09 13:29:51,457 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 08:30:22] 2026-01-09 13:29:51,457 | INFO     | ***************************************
[2026-01-09 08:30:22] 2026-01-09 13:29:51,457 | INFO     | 
[2026-01-09 08:30:22] 2026-01-09 13:29:51,458 | INFO     | architecture information:
[2026-01-09 08:30:22] 2026-01-09 13:29:51,458 | INFO     | executing command: cat /etc/os-release
[2026-01-09 08:30:22] 2026-01-09 13:29:51,477 | INFO     | cat /etc/os-release:
[2026-01-09 08:30:22] NAME="CentOS Linux"
[2026-01-09 08:30:22] VERSION="7 (Core)"
[2026-01-09 08:30:22] ID="centos"
[2026-01-09 08:30:22] ID_LIKE="rhel fedora"
[2026-01-09 08:30:22] VERSION_ID="7"
[2026-01-09 08:30:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 08:30:22] ANSI_COLOR="0;31"
[2026-01-09 08:30:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 08:30:22] HOME_URL="https://www.centos.org/"
[2026-01-09 08:30:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 08:30:22] 
[2026-01-09 08:30:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 08:30:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 08:30:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 08:30:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 08:30:22] 
[2026-01-09 08:30:22] 2026-01-09 13:29:51,478 | INFO     | ***************************************
[2026-01-09 08:30:22] 2026-01-09 13:29:51,980 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 08:30:22] 2026-01-09 13:29:52,002 | INFO     | sufficient remaining disk space (18505269248 B)
[2026-01-09 08:30:22] 2026-01-09 13:29:52,002 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 08:30:22] 2026-01-09 13:29:52,003 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 08:30:22] 2026-01-09 13:29:52,003 | INFO     | update_server=False
[2026-01-09 08:30:22] 2026-01-09 13:29:52,003 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 08:30:22] 2026-01-09 13:29:52,003 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 08:30:22] 2026-01-09 13:29:52,502 | INFO     | all data control threads have been joined
[2026-01-09 08:30:22] 2026-01-09 13:29:52,504 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 08:30:22] 2026-01-09 13:29:52,512 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 08:30:22] 2026-01-09 13:29:52,512 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 08:30:22] 2026-01-09 13:29:52,513 | INFO     | will abort loop
[2026-01-09 08:30:22] 2026-01-09 13:29:52,634 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 08:30:22] 2026-01-09 13:29:52,872 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 08:30:22] 2026-01-09 13:29:53,009 | INFO     | [job] retrieve thread has finished
[2026-01-09 08:30:22] 2026-01-09 13:29:53,009 | INFO     | [job] queue monitor thread has finished
[2026-01-09 08:30:22] 2026-01-09 13:29:53,017 | INFO     | [monitor] cgroup control has ended
[2026-01-09 08:30:22] 2026-01-09 13:29:53,158 | INFO     | all payload control threads have been joined
[2026-01-09 08:30:22] 2026-01-09 13:29:53,188 | INFO     | [payload] validate_post thread has finished
[2026-01-09 08:30:22] 2026-01-09 13:29:53,415 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 08:30:22] 2026-01-09 13:29:53,508 | INFO     | [data] control thread has finished
[2026-01-09 08:30:22] 2026-01-09 13:29:53,518 | INFO     | [job] job monitor thread has finished
[2026-01-09 08:30:22] 2026-01-09 13:29:53,531 | INFO     | all job control threads have been joined
[2026-01-09 08:30:22] 2026-01-09 13:29:53,580 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 08:30:22] 2026-01-09 13:29:53,588 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 08:30:22] 2026-01-09 13:29:53,598 | INFO     | [data] copytool_in thread has finished
[2026-01-09 08:30:22] 2026-01-09 13:29:54,164 | INFO     | [payload] control thread has finished
[2026-01-09 08:30:22] 2026-01-09 13:29:54,191 | INFO     | [payload] failed_post thread has finished
[2026-01-09 08:30:22] 2026-01-09 13:29:54,307 | INFO     | [job] validate thread has finished
[2026-01-09 08:30:22] 2026-01-09 13:29:54,536 | INFO     | [job] control thread has finished
[2026-01-09 08:30:22] 2026-01-09 13:29:54,878 | INFO     | [data] copytool_out thread has finished
[2026-01-09 08:30:22] 2026-01-09 13:29:56,640 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 08:30:22] 2026-01-09 13:30:02,550 | INFO     | job.realtimelogging is not enabled
[2026-01-09 08:30:22] 2026-01-09 13:30:03,551 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 08:30:22] 2026-01-09 13:30:04,541 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139737061099328)>', '<ExcThread(monitor, started 139735804663552)>']
[2026-01-09 08:30:22] 2026-01-09 13:30:09,556 | INFO     | all workflow threads have been joined
[2026-01-09 08:30:22] 2026-01-09 13:30:09,556 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 08:30:22] 2026-01-09 13:30:09,557 | INFO     | traces error code: 0
[2026-01-09 08:30:22] 2026-01-09 13:30:09,557 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 08:30:22] 2026-01-09 13:30:22,300 | INFO     | PID=12373 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 08:30:22] 2026-01-09 13:30:22,301 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 08:30:22] 2026-01-09 13:30:22,301 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 08:30:22] 2026-01-09 13:30:22,301 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 08:30:22] 2026-01-09 13:30:22,302 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 08:30:22] 2026-01-09 13:30:22,302 | INFO     | [monitor] control thread has ended
[2026-01-09 08:30:22] 2026-01-09 13:30:22,407 [wrapper] ==== pilot stdout END ====
[2026-01-09 08:30:22] 2026-01-09 13:30:22,411 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 08:30:22] 2026-01-09 13:30:22,416 [wrapper] pilotpid: 12373
[2026-01-09 08:30:22] 2026-01-09 13:30:22,420 [wrapper] Pilot exit status: 0
[2026-01-09 08:30:22] 2026-01-09 13:30:22,438 [wrapper] pandaids: 6963190128
[2026-01-09 08:30:22] 2026-01-09 13:30:22,484 [wrapper] cleanup supervisor_pilot 28869 12374
[2026-01-09 08:30:22] 2026-01-09 13:30:22,489 [wrapper] Test setup, not cleaning
[2026-01-09 08:30:22] 2026-01-09 13:30:22,493 [wrapper] apfmon messages muted
[2026-01-09 08:30:22] 2026-01-09 13:30:22,498 [wrapper] ==== wrapper stdout END ====
[2026-01-09 08:30:22] 2026-01-09 13:30:22,503 [wrapper] ==== wrapper stderr END ====
[2026-01-09 08:30:22]  *** Error codes and diagnostics ***
[2026-01-09 08:30:22]     "exeErrorCode": 0,
[2026-01-09 08:30:22]     "exeErrorDiag": "",
[2026-01-09 08:30:22]     "pilotErrorCode": 0,
[2026-01-09 08:30:22]     "pilotErrorDiag": "",
[2026-01-09 08:30:22]  *** Listing of results directory ***
[2026-01-09 08:30:22] total 437324
[2026-01-09 08:30:22] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 23:21 queuedata.json
[2026-01-09 08:30:22] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-09 08:30:22] -rwx------ 1 boincer umatlas     36322 Jan  8 23:22 runpilot2-wrapper.sh
[2026-01-09 08:30:22] -rw-r--r-- 1 boincer umatlas       100 Jan  9 05:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 08:30:22] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 05:39 run_atlas
[2026-01-09 08:30:22] -rw-r--r-- 1 boincer umatlas       105 Jan  9 05:39 job.xml
[2026-01-09 08:30:22] -rw-r--r-- 2 boincer umatlas 224857037 Jan  9 05:39 EVNT.47898824._001487.pool.root.1
[2026-01-09 08:30:22] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 05:39 start_atlas.sh
[2026-01-09 08:30:22] drwxrwx--x 2 boincer umatlas      4096 Jan  9 05:39 shared
[2026-01-09 08:30:22] -rw-r--r-- 2 boincer umatlas    592404 Jan  9 05:39 input.tar.gz
[2026-01-09 08:30:22] -rw-r--r-- 1 boincer umatlas         0 Jan  9 05:39 boinc_lockfile
[2026-01-09 08:30:22] -rw-r--r-- 1 boincer umatlas      2520 Jan  9 05:39 pandaJob.out
[2026-01-09 08:30:22] -rw------- 1 boincer umatlas        57 Jan  9 05:39 setup.sh.local
[2026-01-09 08:30:22] -rw------- 1 boincer umatlas    989369 Jan  9 05:39 agis_schedconf.cvmfs.json
[2026-01-09 08:30:22] -rw------- 1 boincer umatlas   1516240 Jan  9 05:39 agis_ddmendpoints.agis.ALL.json
[2026-01-09 08:30:22] drwx------ 5 boincer umatlas      4096 Jan  9 05:39 pilot3
[2026-01-09 08:30:22] -rw-r--r-- 1 boincer umatlas      5911 Jan  9 08:28 init_data.xml
[2026-01-09 08:30:22] -rw------- 1 boincer umatlas 215412079 Jan  9 08:29 HITS.47898826._038713.pool.root.1
[2026-01-09 08:30:22] -rw-r--r-- 1 boincer umatlas       531 Jan  9 08:29 boinc_task_state.xml
[2026-01-09 08:30:22] -rw------- 1 boincer umatlas      1047 Jan  9 08:29 memory_monitor_summary.json
[2026-01-09 08:30:22] -rw------- 1 boincer umatlas    408473 Jan  9 08:29 log.47898826._038713.job.log.tgz.1
[2026-01-09 08:30:22] -rw------- 1 boincer umatlas      7843 Jan  9 08:29 heartbeat.json
[2026-01-09 08:30:22] -rw-r--r-- 1 boincer umatlas        28 Jan  9 08:30 wrapper_checkpoint.txt
[2026-01-09 08:30:22] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 08:30 boinc_mmap_file
[2026-01-09 08:30:22] -rw------- 1 boincer umatlas       745 Jan  9 08:30 pilotlog.txt
[2026-01-09 08:30:22] -rw------- 1 boincer umatlas        95 Jan  9 08:30 pilot_heartbeat.json
[2026-01-09 08:30:22] -rw------- 1 boincer umatlas   1416943 Jan  9 08:30 log.47898826._038713.job.log.1
[2026-01-09 08:30:22] -rw------- 1 boincer umatlas       357 Jan  9 08:30 output.list
[2026-01-09 08:30:22] -rw-r--r-- 1 boincer umatlas       620 Jan  9 08:30 runtime_log
[2026-01-09 08:30:22] -rw------- 1 boincer umatlas   1843200 Jan  9 08:30 result.tar.gz
[2026-01-09 08:30:22] -rw-r--r-- 1 boincer umatlas      9343 Jan  9 08:30 runtime_log.err
[2026-01-09 08:30:22] -rw------- 1 boincer umatlas       662 Jan  9 08:30 l2LNDmRCJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmHwgKDm7BSNwm.diag
[2026-01-09 08:30:22] -rw-r--r-- 1 boincer umatlas     21276 Jan  9 08:30 stderr.txt
[2026-01-09 08:30:22] HITS file was successfully produced:
[2026-01-09 08:30:22] -rw------- 1 boincer umatlas 215412079 Jan  9 08:29 shared/HITS.pool.root.1
[2026-01-09 08:30:22]  *** Contents of shared directory: ***
[2026-01-09 08:30:22] total 432348
[2026-01-09 08:30:22] -rw-r--r-- 2 boincer umatlas 224857037 Jan  9 05:39 ATLAS.root_0
[2026-01-09 08:30:22] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 05:39 start_atlas.sh
[2026-01-09 08:30:22] -rw-r--r-- 2 boincer umatlas    592404 Jan  9 05:39 input.tar.gz
[2026-01-09 08:30:22] -rw------- 1 boincer umatlas 215412079 Jan  9 08:29 HITS.pool.root.1
[2026-01-09 08:30:22] -rw------- 1 boincer umatlas   1843200 Jan  9 08:30 result.tar.gz
08:30:24 (8661): run_atlas exited; CPU time 76645.508031
08:30:24 (8661): called boinc_finish(0)

</stderr_txt>
]]>

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