Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
20:03:15 (3232546): wrapper (7.7.26015): starting
20:03:15 (3232546): wrapper: running run_atlas (--nthreads 3)
[2026-01-09 20:03:15] Arguments: --nthreads 3
[2026-01-09 20:03:15] Threads: 3
[2026-01-09 20:03:15] Checking for CVMFS
[2026-01-09 20:03:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 20:03:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 20:03:15] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 20:03:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 20:03:15] 2.9.2.0 2563955 2759 79832 154953 3 56 22816831 36864000 0 130560 0 1718235 99.988 104152 5735 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-09 20:03:15] CVMFS is ok
[2026-01-09 20:03:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 20:03:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 20:03:15] Further information can be found at the LHC@home message board.
[2026-01-09 20:03:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 20:03:15] Checking for apptainer binary...
[2026-01-09 20:03:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 20:03:15] Running /usr/bin/apptainer --version
[2026-01-09 20:03:15] apptainer version 1.4.1-1.1
[2026-01-09 20:03:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 20:03:15] thA349
[2026-01-09 20:03:15] apptainer works
[2026-01-09 20:03:15] Set ATHENA_PROC_NUMBER=3
[2026-01-09 20:03:15] Set ATHENA_CORE_NUMBER=3
[2026-01-09 20:03:15] Starting ATLAS job with PandaID=6963189204
[2026-01-09 20:03:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 21:59:44]  *** The last 200 lines of the pilot log: ***
[2026-01-09 21:59:44] 2026-01-09 20:59:15,311 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 21:59:44] 2026-01-09 20:59:15,483 | INFO     | all job control threads have been joined
[2026-01-09 21:59:44] 2026-01-09 20:59:15,560 | INFO     | [data] copytool_in thread has finished
[2026-01-09 21:59:44] 2026-01-09 20:59:15,677 | INFO     | [data] control thread has finished
[2026-01-09 21:59:44] 2026-01-09 20:59:15,838 | INFO     | [payload] failed_post thread has finished
[2026-01-09 21:59:44] 2026-01-09 20:59:15,967 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 21:59:44] 2026-01-09 20:59:16,076 | INFO     | [payload] control thread has finished
[2026-01-09 21:59:44] 2026-01-09 20:59:16,105 | INFO     | [job] validate thread has finished
[2026-01-09 21:59:44] 2026-01-09 20:59:16,187 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 21:59:44] 2026-01-09 20:59:16,196 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 21:59:44] 2026-01-09 20:59:16,204 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 21:59:44] 2026-01-09 20:59:16,485 | INFO     | [job] control thread has finished
[2026-01-09 21:59:44] 2026-01-09 20:59:17,317 | INFO     | [data] copytool_out thread has finished
[2026-01-09 21:59:44] 2026-01-09 20:59:17,961 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 21:59:44] 2026-01-09 20:59:30,343 | INFO     | [monitor] cgroup control has ended
[2026-01-09 21:59:44] 2026-01-09 20:59:31,028 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140154005378880)>', '<ExcThread(monitor, started 140153347622656)>']
[2026-01-09 21:59:44] 2026-01-09 20:59:36,053 | INFO     | all workflow threads have been joined
[2026-01-09 21:59:44] 2026-01-09 20:59:36,054 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 21:59:44] 2026-01-09 20:59:36,054 | INFO     | traces error code: 0
[2026-01-09 21:59:44] 2026-01-09 20:59:36,054 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 21:59:44] 2026-01-09 20:59:44,198 | INFO     | PID=3236275 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 21:59:44] 2026-01-09 20:59:44,199 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 21:59:44] 2026-01-09 20:59:44,199 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 21:59:44] 2026-01-09 20:59:44,199 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 21:59:44] 2026-01-09 20:59:44,199 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 21:59:44] 2026-01-09 20:59:44,199 | INFO     | [monitor] control thread has ended
[2026-01-09 21:59:44] 2026-01-09 20:59:44,242 [wrapper] ==== pilot stdout END ====
[2026-01-09 21:59:44] 2026-01-09 20:59:44,245 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 21:59:44] 2026-01-09 20:59:44,247 [wrapper] pilotpid: 3236275
[2026-01-09 21:59:44] 2026-01-09 20:59:44,249 [wrapper] Pilot exit status: 0
[2026-01-09 21:59:44] 2026-01-09 20:59:44,256 [wrapper] pandaids: 6963189204
[2026-01-09 21:59:44] 2026-01-09 20:59:44,272 [wrapper] cleanup supervisor_pilot 3257211 3236276
[2026-01-09 21:59:44] 2026-01-09 20:59:44,274 [wrapper] Test setup, not cleaning
[2026-01-09 21:59:44] 2026-01-09 20:59:44,276 [wrapper] apfmon messages muted
[2026-01-09 21:59:44] 2026-01-09 20:59:44,278 [wrapper] ==== wrapper stdout END ====
[2026-01-09 21:59:44] 2026-01-09 20:59:44,281 [wrapper] ==== wrapper stderr END ====
[2026-01-09 21:59:44]  *** Error codes and diagnostics ***
[2026-01-09 21:59:44]     "exeErrorCode": 0,
[2026-01-09 21:59:44]     "exeErrorDiag": "",
[2026-01-09 21:59:44]     "pilotErrorCode": 0,
[2026-01-09 21:59:44]     "pilotErrorDiag": "",
[2026-01-09 21:59:44]  *** Listing of results directory ***
[2026-01-09 21:59:44] total 445156
[2026-01-09 21:59:44] -rw-r--r-- 1 boinc boinc      5112 Jan  9 05:21 queuedata.json
[2026-01-09 21:59:44] -rw-r--r-- 1 boinc boinc    579449 Jan  9 05:21 pilot3.tar.gz
[2026-01-09 21:59:44] -rwx------ 1 boinc boinc     36322 Jan  9 05:22 runpilot2-wrapper.sh
[2026-01-09 21:59:44] -rw-r--r-- 1 boinc boinc       100 Jan  9 20:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 21:59:44] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 20:03 run_atlas
[2026-01-09 21:59:44] -rw-r--r-- 1 boinc boinc       105 Jan  9 20:03 job.xml
[2026-01-09 21:59:44] -rw-r--r-- 2 boinc boinc 225878083 Jan  9 20:03 EVNT.47898824._001462.pool.root.1
[2026-01-09 21:59:44] -rw-r--r-- 2 boinc boinc    592392 Jan  9 20:03 input.tar.gz
[2026-01-09 21:59:44] -rw-r--r-- 2 boinc boinc     15847 Jan  9 20:03 start_atlas.sh
[2026-01-09 21:59:44] drwxrwx--x 2 boinc boinc      4096 Jan  9 20:03 shared
[2026-01-09 21:59:44] -rw-r--r-- 1 boinc boinc         0 Jan  9 20:03 boinc_setup_complete
[2026-01-09 21:59:44] -rw-r--r-- 1 boinc boinc      6445 Jan  9 20:03 init_data.xml
[2026-01-09 21:59:44] -rw-r--r-- 1 boinc boinc         0 Jan  9 20:03 boinc_lockfile
[2026-01-09 21:59:44] -rw-r--r-- 1 boinc boinc      2520 Jan  9 20:03 pandaJob.out
[2026-01-09 21:59:44] -rw------- 1 boinc boinc    989372 Jan  9 20:03 agis_schedconf.cvmfs.json
[2026-01-09 21:59:44] -rw------- 1 boinc boinc   1516240 Jan  9 20:03 agis_ddmendpoints.agis.ALL.json
[2026-01-09 21:59:44] drwx------ 5 boinc boinc      4096 Jan  9 20:03 pilot3
[2026-01-09 21:59:44] -rw------- 1 boinc boinc 223494288 Jan  9 21:58 HITS.47898826._038086.pool.root.1
[2026-01-09 21:59:44] -rw------- 1 boinc boinc        95 Jan  9 21:58 pilot_heartbeat.json
[2026-01-09 21:59:44] -rw-r--r-- 1 boinc boinc       529 Jan  9 21:58 boinc_task_state.xml
[2026-01-09 21:59:44] -rw------- 1 boinc boinc      1012 Jan  9 21:59 memory_monitor_summary.json
[2026-01-09 21:59:44] -rw------- 1 boinc boinc    280636 Jan  9 21:59 log.47898826._038086.job.log.tgz.1
[2026-01-09 21:59:44] -rw------- 1 boinc boinc      7737 Jan  9 21:59 heartbeat.json
[2026-01-09 21:59:44] -rw-r--r-- 1 boinc boinc        27 Jan  9 21:59 wrapper_checkpoint.txt
[2026-01-09 21:59:44] -rw-r--r-- 1 boinc boinc      8192 Jan  9 21:59 boinc_mmap_file
[2026-01-09 21:59:44] -rw------- 1 boinc boinc       747 Jan  9 21:59 pilotlog.txt
[2026-01-09 21:59:44] -rw------- 1 boinc boinc   1003902 Jan  9 21:59 log.47898826._038086.job.log.1
[2026-01-09 21:59:44] -rw------- 1 boinc boinc       357 Jan  9 21:59 output.list
[2026-01-09 21:59:44] -rw-r--r-- 1 boinc boinc       620 Jan  9 21:59 runtime_log
[2026-01-09 21:59:44] -rw------- 1 boinc boinc   1300480 Jan  9 21:59 result.tar.gz
[2026-01-09 21:59:44] -rw------- 1 boinc boinc       659 Jan  9 21:59 vo7KDmECJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmb8lKDmswFbGn.diag
[2026-01-09 21:59:44] -rw-r--r-- 1 boinc boinc      8897 Jan  9 21:59 runtime_log.err
[2026-01-09 21:59:44] -rw-r--r-- 1 boinc boinc      6135 Jan  9 21:59 stderr.txt
[2026-01-09 21:59:44] HITS file was successfully produced:
[2026-01-09 21:59:44] -rw------- 1 boinc boinc 223494288 Jan  9 21:58 shared/HITS.pool.root.1
[2026-01-09 21:59:44]  *** Contents of shared directory: ***
[2026-01-09 21:59:44] total 440724
[2026-01-09 21:59:44] -rw-r--r-- 2 boinc boinc 225878083 Jan  9 20:03 ATLAS.root_0
[2026-01-09 21:59:44] -rw-r--r-- 2 boinc boinc    592392 Jan  9 20:03 input.tar.gz
[2026-01-09 21:59:44] -rw-r--r-- 2 boinc boinc     15847 Jan  9 20:03 start_atlas.sh
[2026-01-09 21:59:44] -rw------- 1 boinc boinc 223494288 Jan  9 21:58 HITS.pool.root.1
[2026-01-09 21:59:44] -rw------- 1 boinc boinc   1300480 Jan  9 21:59 result.tar.gz
21:59:46 (3232546): run_atlas exited; CPU time 20102.175228
21:59:46 (3232546): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN