Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:27:58 (13604): wrapper (7.7.26015): starting
05:27:58 (13604): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 05:27:58] Arguments: --nthreads 8
[2026-01-09 05:27:58] Threads: 8
[2026-01-09 05:27:58] Checking for CVMFS
[2026-01-09 05:27:58] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 05:27:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 05:27:58] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 05:27:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 05:27:58] 2.11.2.0 28705 181082 138148 154940 2 56 10998178 18432000 1833 130560 0 121609902 99.980 7078451 33938 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 05:27:58] CVMFS is ok
[2026-01-09 05:27:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 05:27:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 05:27:58] Further information can be found at the LHC@home message board.
[2026-01-09 05:27:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 05:27:58] Checking for apptainer binary...
[2026-01-09 05:27:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 05:27:58] Running /usr/bin/apptainer --version
[2026-01-09 05:27:58] apptainer version 1.3.2-1.el7
[2026-01-09 05:27:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 05:27:59] c-206-27.aglt2.org
[2026-01-09 05:27:59] apptainer works
[2026-01-09 05:27:59] Set ATHENA_PROC_NUMBER=8
[2026-01-09 05:27:59] Set ATHENA_CORE_NUMBER=8
[2026-01-09 05:27:59] Starting ATLAS job with PandaID=6963189197
[2026-01-09 05:27:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 09:54:44]  *** The last 200 lines of the pilot log: ***
[2026-01-09 09:54:44] 2026-01-09 14:54:10,409 | INFO     | .. there are 3 such processes running
[2026-01-09 09:54:44] 2026-01-09 14:54:11,410 | INFO     | time since job start (15961s) is within the limit (349056.0s)
[2026-01-09 09:54:44] 2026-01-09 14:54:11,873 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 09:54:44] 2026-01-09 14:54:11,877 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2161.7083333333335
[2026-01-09 09:54:44] 2026-01-09 14:54:11,880 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6963189197/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 09:54:44] 2026-01-09 14:54:11,880 | INFO     | extracted standard info from prmon json
[2026-01-09 09:54:44] 2026-01-09 14:54:11,880 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 09:54:44] 2026-01-09 14:54:11,880 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 09:54:44] 2026-01-09 14:54:11,881 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 09:54:44] 2026-01-09 14:54:11,881 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 09:54:44] 2026-01-09 14:54:11,884 | INFO     | fitting pss+swap vs Time
[2026-01-09 09:54:44] 2026-01-09 14:54:11,885 | INFO     | sum of square deviations: 5576683165.5
[2026-01-09 09:54:44] 2026-01-09 14:54:11,886 | INFO     | sum of deviations: -1742032174.5000076
[2026-01-09 09:54:44] 2026-01-09 14:54:11,886 | INFO     | mean x: 1767962475.5
[2026-01-09 09:54:44] 2026-01-09 14:54:11,886 | INFO     | mean y: 2494074.0877862596
[2026-01-09 09:54:44] 2026-01-09 14:54:11,887 | INFO     | intersect: 554766352.1119486
[2026-01-09 09:54:44] 2026-01-09 14:54:11,887 | INFO     | chi2: 2.1862008784079574
[2026-01-09 09:54:44] 2026-01-09 14:54:11,887 | INFO     | sum of square deviations: 5263458688.0
[2026-01-09 09:54:44] 2026-01-09 14:54:11,889 | INFO     | sum of deviations: 15406641655.999996
[2026-01-09 09:54:44] 2026-01-09 14:54:11,889 | INFO     | mean x: 1767962323.0
[2026-01-09 09:54:44] 2026-01-09 14:54:11,889 | INFO     | mean y: 2502292.3424124513
[2026-01-09 09:54:44] 2026-01-09 14:54:11,889 | INFO     | intersect: -5172490727.716857
[2026-01-09 09:54:44] 2026-01-09 14:54:11,889 | INFO     | chi2: 1.4157779083904773
[2026-01-09 09:54:44] 2026-01-09 14:54:11,889 | INFO     | current chi2=1.4157779083904773 (change=35.24026440692495 %)
[2026-01-09 09:54:44] 2026-01-09 14:54:11,890 | INFO     | sum of square deviations: 4962187923.0
[2026-01-09 09:54:44] 2026-01-09 14:54:11,891 | INFO     | sum of deviations: 14871220378.000008
[2026-01-09 09:54:44] 2026-01-09 14:54:11,891 | INFO     | mean x: 1767962170.5
[2026-01-09 09:54:44] 2026-01-09 14:54:11,891 | INFO     | mean y: 2502021.261904762
[2026-01-09 09:54:44] 2026-01-09 14:54:11,892 | INFO     | intersect: -5295917842.203779
[2026-01-09 09:54:44] 2026-01-09 14:54:11,892 | INFO     | chi2: 1.4161057041501748
[2026-01-09 09:54:44] 2026-01-09 14:54:11,892 | INFO     | current chi2=1.4161057041501748 (change=-0.023153049482887416 %)
[2026-01-09 09:54:44] 2026-01-09 14:54:11,892 | INFO     | right removable region: 251
[2026-01-09 09:54:44] 2026-01-09 14:54:11,892 | INFO     | sum of square deviations: 5263458688.0
[2026-01-09 09:54:44] 2026-01-09 14:54:11,894 | INFO     | sum of deviations: -39115836847.0
[2026-01-09 09:54:44] 2026-01-09 14:54:11,894 | INFO     | mean x: 1767962628.0
[2026-01-09 09:54:44] 2026-01-09 14:54:11,894 | INFO     | mean y: 2512103.4163424126
[2026-01-09 09:54:44] 2026-01-09 14:54:11,894 | INFO     | intersect: 13141275378.239134
[2026-01-09 09:54:44] 2026-01-09 14:54:11,895 | INFO     | chi2: 0.854985790667911
[2026-01-09 09:54:44] 2026-01-09 14:54:11,895 | INFO     | current chi2=0.854985790667911 (change=60.89170948963611 %)
[2026-01-09 09:54:44] 2026-01-09 14:54:11,895 | INFO     | sum of square deviations: 4962187923.0
[2026-01-09 09:54:44] 2026-01-09 14:54:11,896 | INFO     | sum of deviations: -37451503849.5
[2026-01-09 09:54:44] 2026-01-09 14:54:11,896 | INFO     | mean x: 1767962780.5
[2026-01-09 09:54:44] 2026-01-09 14:54:11,897 | INFO     | mean y: 2511234.273809524
[2026-01-09 09:54:44] 2026-01-09 14:54:11,897 | INFO     | intersect: 13345993163.438238
[2026-01-09 09:54:44] 2026-01-09 14:54:11,897 | INFO     | chi2: 0.8427030890679359
[2026-01-09 09:54:44] 2026-01-09 14:54:11,897 | INFO     | current chi2=0.8427030890679359 (change=1.4365971615013555 %)
[2026-01-09 09:54:44] 2026-01-09 14:54:11,897 | INFO     | left removable region: 20
[2026-01-09 09:54:44] 2026-01-09 14:54:11,898 | INFO     | sum of square deviations: 3822136780.0
[2026-01-09 09:54:44] 2026-01-09 14:54:11,899 | INFO     | sum of deviations: -11788871041.0
[2026-01-09 09:54:44] 2026-01-09 14:54:11,899 | INFO     | mean x: 1767962750.0
[2026-01-09 09:54:44] 2026-01-09 14:54:11,899 | INFO     | mean y: 2515377.5454545454
[2026-01-09 09:54:44] 2026-01-09 14:54:11,899 | INFO     | intersect: 5455560641.153662
[2026-01-09 09:54:44] 2026-01-09 14:54:11,899 | INFO     | chi2: 0.03972237967074499
[2026-01-09 09:54:44] 2026-01-09 14:54:11,899 | INFO     | current memory leak: -3.08 B/s (using 231 data points, chi2=0.04)
[2026-01-09 09:54:44] 2026-01-09 14:54:11,900 | INFO     | could have reported an average CPU frequency of 2563 MHz (12 samples)
[2026-01-09 09:54:44] 2026-01-09 14:54:11,900 | INFO     | ..............................
[2026-01-09 09:54:44] 2026-01-09 14:54:11,900 | INFO     | . Timing measurements:
[2026-01-09 09:54:44] 2026-01-09 14:54:11,900 | INFO     | . get job = 0 s
[2026-01-09 09:54:44] 2026-01-09 14:54:11,900 | INFO     | . initial setup = 2 s
[2026-01-09 09:54:44] 2026-01-09 14:54:11,900 | INFO     | . payload setup = 5 s
[2026-01-09 09:54:44] 2026-01-09 14:54:11,900 | INFO     | . stage-in = 0 s
[2026-01-09 09:54:44] 2026-01-09 14:54:11,900 | INFO     | . payload execution = 15928 s
[2026-01-09 09:54:44] 2026-01-09 14:54:11,901 | INFO     | . stage-out = 2 s
[2026-01-09 09:54:44] 2026-01-09 14:54:11,901 | INFO     | . log creation = 0 s
[2026-01-09 09:54:44] 2026-01-09 14:54:11,901 | INFO     | ..............................
[2026-01-09 09:54:44] 2026-01-09 14:54:12,326 | INFO     | 
[2026-01-09 09:54:44] 2026-01-09 14:54:12,326 | INFO     | job summary report
[2026-01-09 09:54:44] 2026-01-09 14:54:12,327 | INFO     | --------------------------------------------------
[2026-01-09 09:54:44] 2026-01-09 14:54:12,327 | INFO     | PanDA job id: 6963189197
[2026-01-09 09:54:44] 2026-01-09 14:54:12,327 | INFO     | task id: 47898826
[2026-01-09 09:54:44] 2026-01-09 14:54:12,327 | INFO     | errors: (none)
[2026-01-09 09:54:44] 2026-01-09 14:54:12,327 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 09:54:44] 2026-01-09 14:54:12,328 | INFO     | pilot state: finished 
[2026-01-09 09:54:44] 2026-01-09 14:54:12,328 | INFO     | transexitcode: 0
[2026-01-09 09:54:44] 2026-01-09 14:54:12,328 | INFO     | exeerrorcode: 0
[2026-01-09 09:54:44] 2026-01-09 14:54:12,328 | INFO     | exeerrordiag: 
[2026-01-09 09:54:44] 2026-01-09 14:54:12,328 | INFO     | exitcode: 0
[2026-01-09 09:54:44] 2026-01-09 14:54:12,328 | INFO     | exitmsg: OK
[2026-01-09 09:54:44] 2026-01-09 14:54:12,329 | INFO     | cpuconsumptiontime: 121017 s
[2026-01-09 09:54:44] 2026-01-09 14:54:12,329 | INFO     | nevents: 400
[2026-01-09 09:54:44] 2026-01-09 14:54:12,329 | INFO     | neventsw: 0
[2026-01-09 09:54:44] 2026-01-09 14:54:12,329 | INFO     | pid: 25928
[2026-01-09 09:54:44] 2026-01-09 14:54:12,329 | INFO     | pgrp: 25928
[2026-01-09 09:54:44] 2026-01-09 14:54:12,329 | INFO     | corecount: 8
[2026-01-09 09:54:44] 2026-01-09 14:54:12,330 | INFO     | event service: False
[2026-01-09 09:54:44] 2026-01-09 14:54:12,330 | INFO     | sizes: {0: 2283800, 1: 2283999, 4: 2284261, 12: 2284289, 15936: 2315643, 15937: 2315642, 15940: 2324824, 15941: 2324880, 15946: 2325074}
[2026-01-09 09:54:44] 2026-01-09 14:54:12,330 | INFO     | --------------------------------------------------
[2026-01-09 09:54:44] 2026-01-09 14:54:12,330 | INFO     | 
[2026-01-09 09:54:44] 2026-01-09 14:54:12,330 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-09 09:54:44] 2026-01-09 14:54:12,347 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 09:54:44] 2026-01-09 14:54:12,347 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 09:54:44] 2026-01-09 14:54:12,347 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 09:54:44] 2026-01-09 14:54:12,347 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 09:54:44] 2026-01-09 14:54:12,347 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 09:54:44] 2026-01-09 14:54:12,348 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 09:54:44] 2026-01-09 14:54:12,348 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 09:54:44] 2026-01-09 14:54:12,348 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 09:54:44] 2026-01-09 14:54:12,348 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 09:54:44] 2026-01-09 14:54:12,348 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 09:54:44] 2026-01-09 14:54:12,349 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 09:54:44] 2026-01-09 14:54:12,349 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 09:54:44] 2026-01-09 14:54:12,349 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 09:54:44] 2026-01-09 14:54:12,349 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 09:54:44] 2026-01-09 14:54:12,349 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 09:54:44] 2026-01-09 14:54:12,349 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 09:54:44] 2026-01-09 14:54:12,350 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 09:54:44] 2026-01-09 14:54:12,350 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 09:54:44] 2026-01-09 14:54:12,350 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 09:54:44] 2026-01-09 14:54:12,350 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 09:54:44] 2026-01-09 14:54:12,350 | INFO     | job 6963189197 has completed (purged errors)
[2026-01-09 09:54:44] 2026-01-09 14:54:12,351 | INFO     | overall cleanup function is called
[2026-01-09 09:54:44] 2026-01-09 14:54:13,359 | INFO     | --- collectZombieJob: --- 10, [25928]
[2026-01-09 09:54:44] 2026-01-09 14:54:13,359 | INFO     | zombie collector waiting for pid 25928
[2026-01-09 09:54:44] 2026-01-09 14:54:13,359 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 09:54:44] 2026-01-09 14:54:13,359 | INFO     | collected zombie processes
[2026-01-09 09:54:44] 2026-01-09 14:54:13,360 | INFO     | will attempt to kill all subprocesses of pid=25928
[2026-01-09 09:54:44] 2026-01-09 14:54:13,482 | INFO     | process IDs to be killed: [25928] (in reverse order)
[2026-01-09 09:54:44] 2026-01-09 14:54:13,521 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 09:54:44] 2026-01-09 14:54:13,521 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 09:54:44] 2026-01-09 14:54:13,524 | INFO     | did not find any defunct processes belonging to 25928
[2026-01-09 09:54:44] 2026-01-09 14:54:13,526 | INFO     | did not find any defunct processes belonging to 25928
[2026-01-09 09:54:44] 2026-01-09 14:54:13,527 | INFO     | ready for new job
[2026-01-09 09:54:44] 2026-01-09 14:54:13,527 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 09:54:44] 2026-01-09 14:54:13,528 | INFO     | ***************************************
[2026-01-09 09:54:44] 2026-01-09 14:54:13,528 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 09:54:44] 2026-01-09 14:54:13,529 | INFO     | ***************************************
[2026-01-09 09:54:44] 2026-01-09 14:54:13,529 | INFO     | 
[2026-01-09 09:54:44] 2026-01-09 14:54:13,529 | INFO     | architecture information:
[2026-01-09 09:54:44] 2026-01-09 14:54:13,530 | INFO     | executing command: cat /etc/os-release
[2026-01-09 09:54:44] 2026-01-09 14:54:13,540 | INFO     | cat /etc/os-release:
[2026-01-09 09:54:44] NAME="CentOS Linux"
[2026-01-09 09:54:44] VERSION="7 (Core)"
[2026-01-09 09:54:44] ID="centos"
[2026-01-09 09:54:44] ID_LIKE="rhel fedora"
[2026-01-09 09:54:44] VERSION_ID="7"
[2026-01-09 09:54:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 09:54:44] ANSI_COLOR="0;31"
[2026-01-09 09:54:44] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 09:54:44] HOME_URL="https://www.centos.org/"
[2026-01-09 09:54:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 09:54:44] 
[2026-01-09 09:54:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 09:54:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 09:54:44] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 09:54:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 09:54:44] 
[2026-01-09 09:54:44] 2026-01-09 14:54:13,541 | INFO     | ***************************************
[2026-01-09 09:54:44] 2026-01-09 14:54:14,043 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-09 09:54:44] 2026-01-09 14:54:14,146 | INFO     | sufficient remaining disk space (28125954048 B)
[2026-01-09 09:54:44] 2026-01-09 14:54:14,146 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 09:54:44] 2026-01-09 14:54:14,146 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 09:54:44] 2026-01-09 14:54:14,146 | INFO     | update_server=False
[2026-01-09 09:54:44] 2026-01-09 14:54:14,146 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 09:54:44] 2026-01-09 14:54:14,146 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 09:54:44] 2026-01-09 14:54:14,147 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 09:54:44] 2026-01-09 14:54:14,147 | INFO     | aborting loop
[2026-01-09 09:54:44] 2026-01-09 14:54:14,638 | INFO     | all job control threads have been joined
[2026-01-09 09:54:44] 2026-01-09 14:54:15,134 | INFO     | all payload control threads have been joined
[2026-01-09 09:54:44] 2026-01-09 14:54:15,151 | INFO     | [job] retrieve thread has finished
[2026-01-09 09:54:44] 2026-01-09 14:54:15,152 | INFO     | [job] job monitor thread has finished
[2026-01-09 09:54:44] 2026-01-09 14:54:15,205 | INFO     | all data control threads have been joined
[2026-01-09 09:54:44] 2026-01-09 14:54:15,417 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 09:54:44] 2026-01-09 14:54:15,644 | INFO     | [job] control thread has finished
[2026-01-09 09:54:44] 2026-01-09 14:54:15,699 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 09:54:44] 2026-01-09 14:54:15,818 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 09:54:44] 2026-01-09 14:54:15,831 | INFO     | [job] validate thread has finished
[2026-01-09 09:54:44] 2026-01-09 14:54:15,867 | INFO     | [data] copytool_in thread has finished
[2026-01-09 09:54:44] 2026-01-09 14:54:16,139 | INFO     | [payload] control thread has finished
[2026-01-09 09:54:44] 2026-01-09 14:54:16,153 | INFO     | [data] copytool_out thread has finished
[2026-01-09 09:54:44] 2026-01-09 14:54:16,208 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 09:54:44] 2026-01-09 14:54:16,210 | INFO     | [data] control thread has finished
[2026-01-09 09:54:44] 2026-01-09 14:54:16,302 | INFO     | [payload] validate_post thread has finished
[2026-01-09 09:54:44] 2026-01-09 14:54:16,396 | INFO     | [payload] failed_post thread has finished
[2026-01-09 09:54:44] 2026-01-09 14:54:16,985 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 09:54:44] 2026-01-09 14:54:17,483 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 09:54:44] 2026-01-09 14:54:17,991 | INFO     | [job] queue monitor thread has finished
[2026-01-09 09:54:44] 2026-01-09 14:54:21,488 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 09:54:44] 2026-01-09 14:54:36,529 | INFO     | [monitor] cgroup control has ended
[2026-01-09 09:54:44] 2026-01-09 14:54:37,467 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139875770480448)>', '<ExcThread(monitor, started 139875063949056)>']
[2026-01-09 09:54:44] 2026-01-09 14:54:42,491 | INFO     | all workflow threads have been joined
[2026-01-09 09:54:44] 2026-01-09 14:54:42,491 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 09:54:44] 2026-01-09 14:54:42,491 | INFO     | traces error code: 0
[2026-01-09 09:54:44] 2026-01-09 14:54:42,492 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 09:54:44] 2026-01-09 14:54:44,612 | INFO     | PID=19351 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 09:54:44] 2026-01-09 14:54:44,613 | INFO     | .. there are 3 such processes running
[2026-01-09 09:54:44] 2026-01-09 14:54:44,613 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 09:54:44] 2026-01-09 14:54:44,613 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 09:54:44] 2026-01-09 14:54:44,613 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 09:54:44] 2026-01-09 14:54:44,613 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 09:54:44] 2026-01-09 14:54:44,613 | INFO     | [monitor] control thread has ended
[2026-01-09 09:54:44] 2026-01-09 14:54:44,710 [wrapper] ==== pilot stdout END ====
[2026-01-09 09:54:44] 2026-01-09 14:54:44,712 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 09:54:44] 2026-01-09 14:54:44,715 [wrapper] pilotpid: 19351
[2026-01-09 09:54:44] 2026-01-09 14:54:44,717 [wrapper] Pilot exit status: 0
[2026-01-09 09:54:44] 2026-01-09 14:54:44,725 [wrapper] pandaids: 6963189197
[2026-01-09 09:54:44] 2026-01-09 14:54:44,752 [wrapper] cleanup supervisor_pilot 28368 19352
[2026-01-09 09:54:44] 2026-01-09 14:54:44,754 [wrapper] Test setup, not cleaning
[2026-01-09 09:54:44] 2026-01-09 14:54:44,756 [wrapper] apfmon messages muted
[2026-01-09 09:54:44] 2026-01-09 14:54:44,758 [wrapper] ==== wrapper stdout END ====
[2026-01-09 09:54:44] 2026-01-09 14:54:44,759 [wrapper] ==== wrapper stderr END ====
[2026-01-09 09:54:44]  *** Error codes and diagnostics ***
[2026-01-09 09:54:44]     "exeErrorCode": 0,
[2026-01-09 09:54:44]     "exeErrorDiag": "",
[2026-01-09 09:54:44]     "pilotErrorCode": 0,
[2026-01-09 09:54:44]     "pilotErrorDiag": "",
[2026-01-09 09:54:44]  *** Listing of results directory ***
[2026-01-09 09:54:44] total 450628
[2026-01-09 09:54:44] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 23:21 queuedata.json
[2026-01-09 09:54:44] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-09 09:54:44] -rwx------ 1 boincer umatlas     36322 Jan  8 23:22 runpilot2-wrapper.sh
[2026-01-09 09:54:44] -rw-r--r-- 1 boincer umatlas       100 Jan  9 05:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 09:54:44] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 05:27 run_atlas
[2026-01-09 09:54:44] -rw-r--r-- 1 boincer umatlas       105 Jan  9 05:27 job.xml
[2026-01-09 09:54:44] -rw-r--r-- 2 boincer umatlas 225878083 Jan  9 05:27 EVNT.47898824._001462.pool.root.1
[2026-01-09 09:54:44] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 05:27 start_atlas.sh
[2026-01-09 09:54:44] drwxrwx--x 2 boincer umatlas      4096 Jan  9 05:27 shared
[2026-01-09 09:54:44] -rw-r--r-- 2 boincer umatlas    592399 Jan  9 05:27 input.tar.gz
[2026-01-09 09:54:44] -rw-r--r-- 1 boincer umatlas         0 Jan  9 05:27 boinc_lockfile
[2026-01-09 09:54:44] -rw-r--r-- 1 boincer umatlas      2520 Jan  9 05:27 pandaJob.out
[2026-01-09 09:54:44] -rw------- 1 boincer umatlas        57 Jan  9 05:28 setup.sh.local
[2026-01-09 09:54:44] -rw------- 1 boincer umatlas    989369 Jan  9 05:28 agis_schedconf.cvmfs.json
[2026-01-09 09:54:44] drwx------ 5 boincer umatlas      4096 Jan  9 05:28 pilot3
[2026-01-09 09:54:44] -rw-r--r-- 1 boincer umatlas      5953 Jan  9 09:48 init_data.xml
[2026-01-09 09:54:44] -rw------- 1 boincer umatlas 226260815 Jan  9 09:53 HITS.47898826._038079.pool.root.1
[2026-01-09 09:54:44] -rw------- 1 boincer umatlas        95 Jan  9 09:53 pilot_heartbeat.json
[2026-01-09 09:54:44] -rw------- 1 boincer umatlas      1055 Jan  9 09:53 memory_monitor_summary.json
[2026-01-09 09:54:44] -rw-r--r-- 1 boincer umatlas       532 Jan  9 09:54 boinc_task_state.xml
[2026-01-09 09:54:44] -rw------- 1 boincer umatlas   1516240 Jan  9 09:54 agis_ddmendpoints.agis.ALL.json
[2026-01-09 09:54:44] -rw------- 1 boincer umatlas    478162 Jan  9 09:54 log.47898826._038079.job.log.tgz.1
[2026-01-09 09:54:44] -rw------- 1 boincer umatlas      7861 Jan  9 09:54 heartbeat.json
[2026-01-09 09:54:44] -rw-r--r-- 1 boincer umatlas        29 Jan  9 09:54 wrapper_checkpoint.txt
[2026-01-09 09:54:44] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 09:54 boinc_mmap_file
[2026-01-09 09:54:44] -rw------- 1 boincer umatlas       820 Jan  9 09:54 pilotlog.txt
[2026-01-09 09:54:44] -rw------- 1 boincer umatlas   2216530 Jan  9 09:54 log.47898826._038079.job.log.1
[2026-01-09 09:54:44] -rw------- 1 boincer umatlas       357 Jan  9 09:54 output.list
[2026-01-09 09:54:44] -rw-r--r-- 1 boincer umatlas       620 Jan  9 09:54 runtime_log
[2026-01-09 09:54:44] -rw------- 1 boincer umatlas   2713600 Jan  9 09:54 result.tar.gz
[2026-01-09 09:54:44] -rw-r--r-- 1 boincer umatlas      9343 Jan  9 09:54 runtime_log.err
[2026-01-09 09:54:44] -rw------- 1 boincer umatlas       663 Jan  9 09:54 grwKDmECJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmX8lKDm1zQ9On.diag
[2026-01-09 09:54:44] -rw-r--r-- 1 boincer umatlas     21073 Jan  9 09:54 stderr.txt
[2026-01-09 09:54:44] HITS file was successfully produced:
[2026-01-09 09:54:44] -rw------- 1 boincer umatlas 226260815 Jan  9 09:53 shared/HITS.pool.root.1
[2026-01-09 09:54:44]  *** Contents of shared directory: ***
[2026-01-09 09:54:44] total 444800
[2026-01-09 09:54:44] -rw-r--r-- 2 boincer umatlas 225878083 Jan  9 05:27 ATLAS.root_0
[2026-01-09 09:54:44] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 05:27 start_atlas.sh
[2026-01-09 09:54:44] -rw-r--r-- 2 boincer umatlas    592399 Jan  9 05:27 input.tar.gz
[2026-01-09 09:54:44] -rw------- 1 boincer umatlas 226260815 Jan  9 09:53 HITS.pool.root.1
[2026-01-09 09:54:44] -rw------- 1 boincer umatlas   2713600 Jan  9 09:54 result.tar.gz
09:54:46 (13604): run_atlas exited; CPU time 121220.050720
09:54:46 (13604): called boinc_finish(0)

</stderr_txt>
]]>

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