Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:01:42 (210013): wrapper (7.7.26015): starting
06:01:42 (210013): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 06:01:42] Arguments: --nthreads 8
[2026-01-09 06:01:42] Threads: 8
[2026-01-09 06:01:42] Checking for CVMFS
[2026-01-09 06:01:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 06:01:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 06:01:43] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 06:01:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 06:01:44] 2.13.3.0 7489 93323 419936 154940 3 585 30933924 32935936 16580 16776704 0 444296697 99.520 564063851 39801 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 06:01:44] CVMFS is ok
[2026-01-09 06:01:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 06:01:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 06:01:44] Further information can be found at the LHC@home message board.
[2026-01-09 06:01:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 06:01:44] Checking for apptainer binary...
[2026-01-09 06:01:44] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 06:01:44] Running /usr/bin/apptainer --version
[2026-01-09 06:01:44] apptainer version 1.4.5-2.el9
[2026-01-09 06:01:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 06:01:45] c7-13-32.aglt2.org
[2026-01-09 06:01:45] apptainer works
[2026-01-09 06:01:45] Set ATHENA_PROC_NUMBER=8
[2026-01-09 06:01:45] Set ATHENA_CORE_NUMBER=8
[2026-01-09 06:01:45] Starting ATLAS job with PandaID=6963189179
[2026-01-09 06:01:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 16:48:52]  *** The last 200 lines of the pilot log: ***
[2026-01-09 16:48:52] 2026-01-09 20:21:39,337 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 16:48:52] 2026-01-09 20:21:39,350 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3292.512406250001
[2026-01-09 16:48:52] 2026-01-09 20:21:39,398 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963189179/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 16:48:52] 2026-01-09 20:21:39,430 | INFO     | extracted standard info from prmon json
[2026-01-09 16:48:52] 2026-01-09 20:21:39,431 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 16:48:52] 2026-01-09 20:21:39,431 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 16:48:52] 2026-01-09 20:21:39,431 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 16:48:52] 2026-01-09 20:21:39,431 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 16:48:52] 2026-01-09 20:21:39,483 | INFO     | fitting pss+swap vs Time
[2026-01-09 16:48:52] 2026-01-09 20:21:39,484 | INFO     | sum of square deviations: 51307888268.965416
[2026-01-09 16:48:52] 2026-01-09 20:21:39,523 | INFO     | sum of deviations: 56870965153.98907
[2026-01-09 16:48:52] 2026-01-09 20:21:39,524 | INFO     | mean x: 1767973325.4116576
[2026-01-09 16:48:52] 2026-01-09 20:21:39,524 | INFO     | mean y: 2493811.8142076503
[2026-01-09 16:48:52] 2026-01-09 20:21:39,555 | INFO     | intersect: -1957172679.5367138
[2026-01-09 16:48:52] 2026-01-09 20:21:39,556 | INFO     | chi2: 4.823089630135712
[2026-01-09 16:48:52] 2026-01-09 20:21:39,557 | INFO     | sum of square deviations: 49918796268.11033
[2026-01-09 16:48:52] 2026-01-09 20:21:39,577 | INFO     | sum of deviations: 197109570431.8638
[2026-01-09 16:48:52] 2026-01-09 20:21:39,578 | INFO     | mean x: 1767973172.9154413
[2026-01-09 16:48:52] 2026-01-09 20:21:39,578 | INFO     | mean y: 2509180.6709558824
[2026-01-09 16:48:52] 2026-01-09 20:21:39,578 | INFO     | intersect: -6978517180.155869
[2026-01-09 16:48:52] 2026-01-09 20:21:39,578 | INFO     | chi2: 1.9326900467809738
[2026-01-09 16:48:52] 2026-01-09 20:21:39,578 | INFO     | current chi2=1.9326900467809738 (change=59.92838211620397 %)
[2026-01-09 16:48:52] 2026-01-09 20:21:39,579 | INFO     | sum of square deviations: 48555007067.239235
[2026-01-09 16:48:52] 2026-01-09 20:21:39,584 | INFO     | sum of deviations: 195086988098.75726
[2026-01-09 16:48:52] 2026-01-09 20:21:39,584 | INFO     | mean x: 1767973020.419295
[2026-01-09 16:48:52] 2026-01-09 20:21:39,584 | INFO     | mean y: 2508954.46567718
[2026-01-09 16:48:52] 2026-01-09 20:21:39,584 | INFO     | intersect: -7100950656.112317
[2026-01-09 16:48:52] 2026-01-09 20:21:39,585 | INFO     | chi2: 1.9324116838384429
[2026-01-09 16:48:52] 2026-01-09 20:21:39,585 | INFO     | current chi2=1.9324116838384429 (change=0.014402875566858276 %)
[2026-01-09 16:48:52] 2026-01-09 20:21:39,585 | INFO     | right removable region: 538
[2026-01-09 16:48:52] 2026-01-09 20:21:39,585 | INFO     | sum of square deviations: 49918658408.11036
[2026-01-09 16:48:52] 2026-01-09 20:21:39,591 | INFO     | sum of deviations: -50120012214.19858
[2026-01-09 16:48:52] 2026-01-09 20:21:39,591 | INFO     | mean x: 1767973477.9154413
[2026-01-09 16:48:52] 2026-01-09 20:21:39,591 | INFO     | mean y: 2505523.4522058824
[2026-01-09 16:48:52] 2026-01-09 20:21:39,591 | INFO     | intersect: 1777610366.6766045
[2026-01-09 16:48:52] 2026-01-09 20:21:39,591 | INFO     | chi2: 3.094011348560345
[2026-01-09 16:48:52] 2026-01-09 20:21:39,592 | INFO     | current chi2=3.094011348560345 (change=35.850013459665156 %)
[2026-01-09 16:48:52] 2026-01-09 20:21:39,592 | INFO     | sum of square deviations: 48554731347.23925
[2026-01-09 16:48:52] 2026-01-09 20:21:39,597 | INFO     | sum of deviations: -84632969771.49536
[2026-01-09 16:48:52] 2026-01-09 20:21:39,597 | INFO     | mean x: 1767973630.419295
[2026-01-09 16:48:52] 2026-01-09 20:21:39,597 | INFO     | mean y: 2509377.6437847866
[2026-01-09 16:48:52] 2026-01-09 20:21:39,598 | INFO     | intersect: 3084162898.6983256
[2026-01-09 16:48:52] 2026-01-09 20:21:39,598 | INFO     | chi2: 2.9376252015225957
[2026-01-09 16:48:52] 2026-01-09 20:21:39,598 | INFO     | current chi2=2.9376252015225957 (change=5.054478779158858 %)
[2026-01-09 16:48:52] 2026-01-09 20:21:39,598 | INFO     | left removable region: 20
[2026-01-09 16:48:52] 2026-01-09 20:21:39,599 | INFO     | sum of square deviations: 43097694553.49789
[2026-01-09 16:48:52] 2026-01-09 20:21:39,603 | INFO     | sum of deviations: 48259317506.965195
[2026-01-09 16:48:52] 2026-01-09 20:21:39,603 | INFO     | mean x: 1767973599.930502
[2026-01-09 16:48:52] 2026-01-09 20:21:39,603 | INFO     | mean y: 2525706.749034749
[2026-01-09 16:48:52] 2026-01-09 20:21:39,603 | INFO     | intersect: -1977190382.1723282
[2026-01-09 16:48:52] 2026-01-09 20:21:39,604 | INFO     | chi2: 0.0044589847851474905
[2026-01-09 16:48:52] 2026-01-09 20:21:39,604 | INFO     | current memory leak: 1.12 B/s (using 518 data points, chi2=0.00)
[2026-01-09 16:48:52] 2026-01-09 20:21:39,605 | INFO     | could have reported an average CPU frequency of 3291 MHz (22 samples)
[2026-01-09 16:48:52] 2026-01-09 20:21:39,605 | INFO     | ..............................
[2026-01-09 16:48:52] 2026-01-09 20:21:39,605 | INFO     | . Timing measurements:
[2026-01-09 16:48:52] 2026-01-09 20:21:39,605 | INFO     | . get job = 0 s
[2026-01-09 16:48:52] 2026-01-09 20:21:39,605 | INFO     | . initial setup = 3 s
[2026-01-09 16:48:52] 2026-01-09 20:21:39,605 | INFO     | . payload setup = 23 s
[2026-01-09 16:48:52] 2026-01-09 20:21:39,605 | INFO     | . stage-in = 0 s
[2026-01-09 16:48:52] 2026-01-09 20:21:39,605 | INFO     | . payload execution = 33464 s
[2026-01-09 16:48:52] 2026-01-09 20:21:39,605 | INFO     | . stage-out = 6 s
[2026-01-09 16:48:52] 2026-01-09 20:21:39,605 | INFO     | . log creation = 1 s
[2026-01-09 16:48:52] 2026-01-09 20:21:39,605 | INFO     | ..............................
[2026-01-09 16:48:52] 2026-01-09 20:21:39,757 | INFO     | 
[2026-01-09 16:48:52] 2026-01-09 20:21:39,757 | INFO     | job summary report
[2026-01-09 16:48:52] 2026-01-09 20:21:39,757 | INFO     | --------------------------------------------------
[2026-01-09 16:48:52] 2026-01-09 20:21:39,757 | INFO     | PanDA job id: 6963189179
[2026-01-09 16:48:52] 2026-01-09 20:21:39,758 | INFO     | task id: 47898826
[2026-01-09 16:48:52] 2026-01-09 20:21:39,758 | INFO     | errors: (none)
[2026-01-09 16:48:52] 2026-01-09 20:21:39,758 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 16:48:52] 2026-01-09 20:21:39,758 | INFO     | pilot state: finished 
[2026-01-09 16:48:52] 2026-01-09 20:21:39,758 | INFO     | transexitcode: 0
[2026-01-09 16:48:52] 2026-01-09 20:21:39,758 | INFO     | exeerrorcode: 0
[2026-01-09 16:48:52] 2026-01-09 20:21:39,758 | INFO     | exeerrordiag: 
[2026-01-09 16:48:52] 2026-01-09 20:21:39,758 | INFO     | exitcode: 0
[2026-01-09 16:48:52] 2026-01-09 20:21:39,758 | INFO     | exitmsg: OK
[2026-01-09 16:48:52] 2026-01-09 20:21:39,758 | INFO     | cpuconsumptiontime: 48898 s
[2026-01-09 16:48:52] 2026-01-09 20:21:39,758 | INFO     | nevents: 400
[2026-01-09 16:48:52] 2026-01-09 20:21:39,758 | INFO     | neventsw: 0
[2026-01-09 16:48:52] 2026-01-09 20:21:39,758 | INFO     | pid: 225408
[2026-01-09 16:48:52] 2026-01-09 20:21:39,759 | INFO     | pgrp: 225408
[2026-01-09 16:48:52] 2026-01-09 20:21:39,759 | INFO     | corecount: 8
[2026-01-09 16:48:52] 2026-01-09 20:21:39,759 | INFO     | event service: False
[2026-01-09 16:48:52] 2026-01-09 20:21:39,759 | INFO     | sizes: {0: 2283143, 1: 2283999, 12: 2283999, 17: 2284289, 22: 2284317, 33493: 2323955, 33494: 2324082, 33500: 2333136, 33503: 2333192, 33522: 2333386}
[2026-01-09 16:48:52] 2026-01-09 20:21:39,759 | INFO     | --------------------------------------------------
[2026-01-09 16:48:52] 2026-01-09 20:21:39,759 | INFO     | 
[2026-01-09 16:48:52] 2026-01-09 20:21:39,759 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 16:48:52] 2026-01-09 20:21:39,832 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 16:48:52] 2026-01-09 20:21:39,832 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 16:48:52] 2026-01-09 20:21:39,832 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 16:48:52] 2026-01-09 20:21:39,832 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 16:48:52] 2026-01-09 20:21:39,832 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 16:48:52] 2026-01-09 20:21:39,833 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 16:48:52] 2026-01-09 20:21:39,833 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 16:48:52] 2026-01-09 20:21:39,833 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 16:48:52] 2026-01-09 20:21:39,833 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 16:48:52] 2026-01-09 20:21:39,833 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 16:48:52] 2026-01-09 20:21:39,833 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 16:48:52] 2026-01-09 20:21:39,834 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 16:48:52] 2026-01-09 20:21:39,834 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 16:48:52] 2026-01-09 20:21:39,834 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 16:48:52] 2026-01-09 20:21:39,834 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 16:48:52] 2026-01-09 20:21:39,834 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 16:48:52] 2026-01-09 20:21:39,834 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 16:48:52] 2026-01-09 20:21:39,834 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 16:48:52] 2026-01-09 20:21:39,834 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 16:48:52] 2026-01-09 20:21:39,834 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 16:48:52] 2026-01-09 20:21:39,834 | INFO     | job 6963189179 has completed (purged errors)
[2026-01-09 16:48:52] 2026-01-09 20:21:39,834 | INFO     | overall cleanup function is called
[2026-01-09 16:48:52] 2026-01-09 20:21:40,843 | INFO     | --- collectZombieJob: --- 10, [225408]
[2026-01-09 16:48:52] 2026-01-09 20:21:40,843 | INFO     | zombie collector waiting for pid 225408
[2026-01-09 16:48:52] 2026-01-09 20:21:40,843 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 16:48:52] 2026-01-09 20:21:40,843 | INFO     | collected zombie processes
[2026-01-09 16:48:52] 2026-01-09 20:21:40,843 | INFO     | will attempt to kill all subprocesses of pid=225408
[2026-01-09 16:48:52] 2026-01-09 20:21:41,521 | INFO     | process IDs to be killed: [225408] (in reverse order)
[2026-01-09 16:48:52] 2026-01-09 20:21:41,645 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 16:48:52] 2026-01-09 20:21:41,645 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 16:48:52] 2026-01-09 20:21:41,660 | INFO     | did not find any defunct processes belonging to 225408
[2026-01-09 16:48:52] 2026-01-09 20:21:41,675 | INFO     | did not find any defunct processes belonging to 225408
[2026-01-09 16:48:52] 2026-01-09 20:21:41,675 | INFO     | ready for new job
[2026-01-09 16:48:52] 2026-01-09 20:21:41,675 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 16:48:52] 2026-01-09 20:21:41,679 | INFO     | ***************************************
[2026-01-09 16:48:52] 2026-01-09 20:21:41,679 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 16:48:52] 2026-01-09 20:21:41,679 | INFO     | ***************************************
[2026-01-09 16:48:52] 2026-01-09 20:21:41,679 | INFO     | 
[2026-01-09 16:48:52] 2026-01-09 20:21:41,682 | INFO     | architecture information:
[2026-01-09 16:48:52] 2026-01-09 20:21:41,682 | INFO     | executing command: cat /etc/os-release
[2026-01-09 16:48:52] 2026-01-09 20:21:41,697 | INFO     | cat /etc/os-release:
[2026-01-09 16:48:52] NAME="CentOS Linux"
[2026-01-09 16:48:52] VERSION="7 (Core)"
[2026-01-09 16:48:52] ID="centos"
[2026-01-09 16:48:52] ID_LIKE="rhel fedora"
[2026-01-09 16:48:52] VERSION_ID="7"
[2026-01-09 16:48:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 16:48:52] ANSI_COLOR="0;31"
[2026-01-09 16:48:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 16:48:52] HOME_URL="https://www.centos.org/"
[2026-01-09 16:48:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 16:48:52] 
[2026-01-09 16:48:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 16:48:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 16:48:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 16:48:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 16:48:52] 
[2026-01-09 16:48:52] 2026-01-09 20:21:41,697 | INFO     | ***************************************
[2026-01-09 16:48:52] 2026-01-09 20:21:42,200 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 16:48:52] 2026-01-09 20:21:42,230 | INFO     | sufficient remaining disk space (95536807936 B)
[2026-01-09 16:48:52] 2026-01-09 20:21:42,231 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 16:48:52] 2026-01-09 20:21:42,231 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 16:48:52] 2026-01-09 20:21:42,231 | INFO     | update_server=False
[2026-01-09 16:48:52] 2026-01-09 20:21:42,231 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 16:48:52] 2026-01-09 20:21:42,232 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 16:48:52] 2026-01-09 20:21:42,423 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 16:48:52] 2026-01-09 20:21:42,423 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 16:48:52] 2026-01-09 20:21:42,423 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 16:48:52] 2026-01-09 20:21:42,423 | INFO     | will abort loop
[2026-01-09 16:48:52] 2026-01-09 20:21:42,608 | INFO     | all payload control threads have been joined
[2026-01-09 16:48:52] 2026-01-09 20:21:42,791 | INFO     | all job control threads have been joined
[2026-01-09 16:48:52] 2026-01-09 20:21:43,071 | INFO     | all data control threads have been joined
[2026-01-09 16:48:52] 2026-01-09 20:21:43,237 | INFO     | [job] retrieve thread has finished
[2026-01-09 16:48:52] 2026-01-09 20:21:43,320 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 16:48:52] 2026-01-09 20:21:43,429 | INFO     | [job] job monitor thread has finished
[2026-01-09 16:48:52] 2026-01-09 20:21:43,430 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 16:48:52] 2026-01-09 20:21:43,468 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 16:48:52] 2026-01-09 20:21:43,548 | INFO     | [data] copytool_in thread has finished
[2026-01-09 16:48:52] 2026-01-09 20:21:43,616 | INFO     | [payload] control thread has finished
[2026-01-09 16:48:52] 2026-01-09 20:21:43,731 | INFO     | [job] validate thread has finished
[2026-01-09 16:48:52] 2026-01-09 20:21:43,817 | INFO     | [job] control thread has finished
[2026-01-09 16:48:52] 2026-01-09 20:21:44,039 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 16:48:52] 2026-01-09 20:21:44,045 | INFO     | [payload] validate_post thread has finished
[2026-01-09 16:48:52] 2026-01-09 20:21:44,077 | INFO     | [data] control thread has finished
[2026-01-09 16:48:52] 2026-01-09 20:21:44,244 | INFO     | [data] copytool_out thread has finished
[2026-01-09 16:48:52] 2026-01-09 20:21:44,667 | INFO     | [payload] failed_post thread has finished
[2026-01-09 16:48:52] 2026-01-09 20:21:44,700 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 16:48:52] 2026-01-09 20:21:44,899 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 16:48:52] 2026-01-09 20:21:45,706 | INFO     | [job] queue monitor thread has finished
[2026-01-09 16:48:52] 2026-01-09 20:21:48,920 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 16:48:52] 2026-01-09 20:22:14,340 | INFO     | PID=215768 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 16:48:52] 2026-01-09 20:22:14,340 | INFO     | .. there are 13 such processes running
[2026-01-09 16:48:52] 2026-01-09 20:22:14,341 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 16:48:52] 2026-01-09 20:22:14,341 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 16:48:52] 2026-01-09 20:22:14,341 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 16:48:52] 2026-01-09 20:22:19,102 | INFO     | [monitor] cgroup control has ended
[2026-01-09 16:48:52] 2026-01-09 20:22:19,857 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140278998869824)>', '<ExcThread(monitor, started 140278505654016)>']
[2026-01-09 16:48:52] 2026-01-09 20:22:20,376 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 16:48:52] 2026-01-09 20:22:20,376 | INFO     | [monitor] control thread has ended
[2026-01-09 16:48:52] 2026-01-09 20:22:24,884 | INFO     | all workflow threads have been joined
[2026-01-09 16:48:52] 2026-01-09 20:22:24,884 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 16:48:52] 2026-01-09 20:22:24,884 | INFO     | traces error code: 0
[2026-01-09 16:48:52] 2026-01-09 20:22:24,885 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 16:48:52] 2026-01-09 20:22:25,643 [wrapper] ==== pilot stdout END ====
[2026-01-09 16:48:52] 2026-01-09 20:22:25,669 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 16:48:52] 2026-01-09 20:22:25,693 [wrapper] pilotpid: 215768
[2026-01-09 16:48:52] 2026-01-09 20:22:25,742 [wrapper] Pilot exit status: 0
[2026-01-09 16:48:52] 2026-01-09 20:22:25,961 [wrapper] pandaids: 6963189179
[2026-01-09 16:48:52] 2026-01-09 20:22:26,724 [wrapper] cleanup supervisor_pilot 2435085 215769
[2026-01-09 16:48:52] 2026-01-09 20:22:26,774 [wrapper] Test setup, not cleaning
[2026-01-09 16:48:52] 2026-01-09 20:22:26,803 [wrapper] apfmon messages muted
[2026-01-09 16:48:52] 2026-01-09 20:22:26,847 [wrapper] ==== wrapper stdout END ====
[2026-01-09 16:48:52] 2026-01-09 20:22:26,863 [wrapper] ==== wrapper stderr END ====
[2026-01-09 16:48:52]  *** Error codes and diagnostics ***
[2026-01-09 16:48:52]     "exeErrorCode": 0,
[2026-01-09 16:48:52]     "exeErrorDiag": "",
[2026-01-09 16:48:52]     "pilotErrorCode": 0,
[2026-01-09 16:48:52]     "pilotErrorDiag": "",
[2026-01-09 16:48:52]  *** Listing of results directory ***
[2026-01-09 16:48:52] total 453208
[2026-01-09 16:48:52] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 23:21 queuedata.json
[2026-01-09 16:48:52] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-09 16:48:52] -rwx------. 1 boincer umatlas     36322 Jan  8 23:22 runpilot2-wrapper.sh
[2026-01-09 16:48:52] -rw-r--r--. 1 boincer umatlas       100 Jan  9 06:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 16:48:52] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 06:01 run_atlas
[2026-01-09 16:48:52] -rw-r--r--. 1 boincer umatlas       105 Jan  9 06:01 job.xml
[2026-01-09 16:48:52] -rw-r--r--. 2 boincer umatlas 224355145 Jan  9 06:01 EVNT.47898824._001461.pool.root.1
[2026-01-09 16:48:52] -rw-r--r--. 2 boincer umatlas    592399 Jan  9 06:01 input.tar.gz
[2026-01-09 16:48:52] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 06:01 start_atlas.sh
[2026-01-09 16:48:52] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 06:01 shared
[2026-01-09 16:48:52] -rw-r--r--. 1 boincer umatlas         0 Jan  9 06:01 boinc_lockfile
[2026-01-09 16:48:52] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 06:01 pandaJob.out
[2026-01-09 16:48:52] -rw-------. 1 boincer umatlas        57 Jan  9 06:01 setup.sh.local
[2026-01-09 16:48:52] -rw-------. 1 boincer umatlas    989369 Jan  9 06:02 agis_schedconf.cvmfs.json
[2026-01-09 16:48:52] drwx------. 5 boincer umatlas      4096 Jan  9 06:02 pilot3
[2026-01-09 16:48:52] -rw-------. 1 boincer umatlas 226027119 Jan  9 15:17 HITS.47898826._038061.pool.root.1
[2026-01-09 16:48:52] -rw-r--r--. 1 boincer umatlas       531 Jan  9 15:17 boinc_task_state.xml
[2026-01-09 16:48:52] -rw-------. 1 boincer umatlas      1031 Jan  9 15:21 memory_monitor_summary.json
[2026-01-09 16:48:52] -rw-------. 1 boincer umatlas   1516240 Jan  9 15:21 agis_ddmendpoints.agis.ALL.json
[2026-01-09 16:48:52] -rw-------. 1 boincer umatlas    699906 Jan  9 15:21 log.47898826._038061.job.log.tgz.1
[2026-01-09 16:48:52] -rw-------. 1 boincer umatlas      7780 Jan  9 15:21 heartbeat.json
[2026-01-09 16:48:52] -rw-------. 1 boincer umatlas        95 Jan  9 15:22 pilot_heartbeat.json
[2026-01-09 16:48:52] -rw-------. 1 boincer umatlas      5009 Jan  9 15:22 pilotlog.txt
[2026-01-09 16:48:52] -rw-------. 1 boincer umatlas   4197994 Jan  9 15:22 log.47898826._038061.job.log.1
[2026-01-09 16:48:52] -rw-------. 1 boincer umatlas       357 Jan  9 15:22 output.list
[2026-01-09 16:48:52] -rw-r--r--. 1 boincer umatlas       620 Jan  9 15:22 runtime_log
[2026-01-09 16:48:52] -rw-------. 1 boincer umatlas   4915200 Jan  9 15:22 result.tar.gz
[2026-01-09 16:48:52] -rw-------. 1 boincer umatlas       658 Jan  9 15:22 U2NODmDCJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmL8lKDm583RBn.diag
[2026-01-09 16:48:52] -rw-r--r--. 1 boincer umatlas      9343 Jan  9 15:22 runtime_log.err
[2026-01-09 16:48:52] -rw-r--r--. 1 boincer umatlas        28 Jan  9 16:48 wrapper_checkpoint.txt
[2026-01-09 16:48:52] -rw-r--r--. 1 boincer umatlas      6904 Jan  9 16:48 init_data.xml
[2026-01-09 16:48:52] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 16:48 boinc_mmap_file
[2026-01-09 16:48:52] -rw-r--r--. 1 boincer umatlas     16447 Jan  9 16:48 stderr.txt
[2026-01-09 16:48:52] HITS file was successfully produced:
[2026-01-09 16:48:52] -rw-------. 1 boincer umatlas 226027119 Jan  9 15:17 shared/HITS.pool.root.1
[2026-01-09 16:48:52]  *** Contents of shared directory: ***
[2026-01-09 16:48:52] total 445232
[2026-01-09 16:48:52] -rw-r--r--. 2 boincer umatlas 224355145 Jan  9 06:01 ATLAS.root_0
[2026-01-09 16:48:52] -rw-r--r--. 2 boincer umatlas    592399 Jan  9 06:01 input.tar.gz
[2026-01-09 16:48:52] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 06:01 start_atlas.sh
[2026-01-09 16:48:52] -rw-------. 1 boincer umatlas 226027119 Jan  9 15:17 HITS.pool.root.1
[2026-01-09 16:48:52] -rw-------. 1 boincer umatlas   4915200 Jan  9 15:22 result.tar.gz
16:48:54 (210013): run_atlas exited; CPU time 49840.036620
16:48:54 (210013): called boinc_finish(0)

</stderr_txt>
]]>

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