Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:32:21 (20185): wrapper (7.7.26015): starting
05:32:21 (20185): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 05:32:21] Arguments: --nthreads 12
[2026-01-09 05:32:21] Threads: 12
[2026-01-09 05:32:21] Checking for CVMFS
[2026-01-09 05:32:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 05:32:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 05:32:21] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 05:32:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 05:32:21] 2.11.2.0 14820 206270 92728 154940 1 57 13547912 20275200 1 130560 0 89169232 99.931 10259829 39337 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 05:32:21] CVMFS is ok
[2026-01-09 05:32:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 05:32:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 05:32:21] Further information can be found at the LHC@home message board.
[2026-01-09 05:32:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 05:32:21] Checking for apptainer binary...
[2026-01-09 05:32:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 05:32:21] Running /usr/bin/apptainer --version
[2026-01-09 05:32:21] apptainer version 1.3.2-1.el7
[2026-01-09 05:32:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 05:32:23] c-205-27.aglt2.org
[2026-01-09 05:32:23] apptainer works
[2026-01-09 05:32:23] Set ATHENA_PROC_NUMBER=12
[2026-01-09 05:32:23] Set ATHENA_CORE_NUMBER=12
[2026-01-09 05:32:23] Starting ATLAS job with PandaID=6963188890
[2026-01-09 05:32:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 07:11:54]  *** The last 200 lines of the pilot log: ***
[2026-01-09 07:11:54]  replicas=None
[2026-01-09 07:11:54]  scope=mc23_13p6TeV
[2026-01-09 07:11:54]  status=None
[2026-01-09 07:11:54]  status_code=0
[2026-01-09 07:11:54]  storage_token=
[2026-01-09 07:11:54]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6963188890/log.47898826._037827.job.log.tgz.1
[2026-01-09 07:11:54]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3d/36/log.47898826._037827.job.log.tgz.1
[2026-01-09 07:11:54]  workdir=None
[2026-01-09 07:11:54] ]
[2026-01-09 07:11:54] 2026-01-09 12:11:03,854 | INFO     | transferring file log.47898826._037827.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6963188890/log.47898826._037827.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-09 07:11:54] 2026-01-09 12:11:03,854 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6963188890/log.47898826._037827.job.log.tgz.1 /tmp/boinchome/slots/0/log.47898826._037827.job
[2026-01-09 07:11:54] 2026-01-09 12:11:03,878 | INFO     | adding to output.list: log.47898826._037827.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3d/36/log.47898826._037827.job.log.tg
[2026-01-09 07:11:54] 2026-01-09 12:11:03,879 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-09 07:11:54] 2026-01-09 12:11:03,879 | INFO     | summary of transferred files:
[2026-01-09 07:11:54] 2026-01-09 12:11:03,879 | INFO     |  -- lfn=log.47898826._037827.job.log.tgz.1, status_code=0, status=transferred
[2026-01-09 07:11:54] 2026-01-09 12:11:03,880 | INFO     | stage-out finished correctly
[2026-01-09 07:11:54] 2026-01-09 12:11:03,972 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-09 07:11:54] 2026-01-09 12:11:04,117 | INFO     | job 6963188890 has state=finished
[2026-01-09 07:11:54] 2026-01-09 12:11:04,117 | INFO     | preparing for final server update for job 6963188890 in state='finished'
[2026-01-09 07:11:54] 2026-01-09 12:11:04,118 | INFO     | this job has now completed (state=finished)
[2026-01-09 07:11:54] 2026-01-09 12:11:04,118 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-09 07:11:54] 2026-01-09 12:11:04,118 | INFO     | log transfer has been attempted: DONE
[2026-01-09 07:11:54] 2026-01-09 12:11:04,118 | INFO     | job 6963188890 has finished - writing final server update
[2026-01-09 07:11:54] 2026-01-09 12:11:04,119 | INFO     | total number of processed events: 400 (read)
[2026-01-09 07:11:54] 2026-01-09 12:11:04,119 | INFO     | executing command: lscpu
[2026-01-09 07:11:54] 2026-01-09 12:11:04,145 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 07:11:54] 2026-01-09 12:11:05,498 | INFO     | time since job start (5908s) is within the limit (349056.0s)
[2026-01-09 07:11:54] 2026-01-09 12:11:07,114 | WARNING  | process 30257 can no longer be monitored (due to stat problems) - aborting
[2026-01-09 07:11:54] 2026-01-09 12:11:07,115 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963188890/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 07:11:54] 2026-01-09 12:11:07,203 | INFO     | number of running child processes to parent process 30257: 1
[2026-01-09 07:11:54] 2026-01-09 12:11:07,203 | INFO     | maximum number of monitored processes: 6
[2026-01-09 07:11:54] 2026-01-09 12:11:07,504 | INFO     | time since job start (5910s) is within the limit (349056.0s)
[2026-01-09 07:11:54] 2026-01-09 12:11:08,625 | INFO     | PID=23895 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 07:11:54] 2026-01-09 12:11:09,625 | INFO     | time since job start (5912s) is within the limit (349056.0s)
[2026-01-09 07:11:54] 2026-01-09 12:11:09,706 | INFO     | monitor loop #436: job 0:6963188890 is in state 'finished'
[2026-01-09 07:11:54] 2026-01-09 12:11:09,707 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 07:11:54] 2026-01-09 12:11:09,866 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 07:11:54] 2026-01-09 12:11:09,870 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1717.9166666666667
[2026-01-09 07:11:54] 2026-01-09 12:11:09,873 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963188890/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 07:11:54] 2026-01-09 12:11:09,873 | INFO     | extracted standard info from prmon json
[2026-01-09 07:11:54] 2026-01-09 12:11:09,874 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 07:11:54] 2026-01-09 12:11:09,874 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 07:11:54] 2026-01-09 12:11:09,874 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 07:11:54] 2026-01-09 12:11:09,875 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 07:11:54] 2026-01-09 12:11:09,877 | INFO     | fitting pss+swap vs Time
[2026-01-09 07:11:54] 2026-01-09 12:11:09,878 | INFO     | sum of square deviations: 226022842.5
[2026-01-09 07:11:54] 2026-01-09 12:11:09,878 | INFO     | sum of deviations: -11433856775.0
[2026-01-09 07:11:54] 2026-01-09 12:11:09,878 | INFO     | mean x: 1767957805.5
[2026-01-09 07:11:54] 2026-01-09 12:11:09,879 | INFO     | mean y: 2762541.9555555554
[2026-01-09 07:11:54] 2026-01-09 12:11:09,879 | INFO     | intersect: 89438750996.66365
[2026-01-09 07:11:54] 2026-01-09 12:11:09,879 | INFO     | chi2: 0.13560185613330922
[2026-01-09 07:11:54] 2026-01-09 12:11:09,879 | INFO     | current memory leak: -50.59 B/s (using 90 data points, chi2=0.14)
[2026-01-09 07:11:54] 2026-01-09 12:11:09,879 | INFO     | could have reported an average CPU frequency of 2142 MHz (7 samples)
[2026-01-09 07:11:54] 2026-01-09 12:11:09,880 | INFO     | ..............................
[2026-01-09 07:11:54] 2026-01-09 12:11:09,880 | INFO     | . Timing measurements:
[2026-01-09 07:11:54] 2026-01-09 12:11:09,880 | INFO     | . get job = 0 s
[2026-01-09 07:11:54] 2026-01-09 12:11:09,880 | INFO     | . initial setup = 2 s
[2026-01-09 07:11:54] 2026-01-09 12:11:09,880 | INFO     | . payload setup = 7 s
[2026-01-09 07:11:54] 2026-01-09 12:11:09,880 | INFO     | . stage-in = 0 s
[2026-01-09 07:11:54] 2026-01-09 12:11:09,880 | INFO     | . payload execution = 5878 s
[2026-01-09 07:11:54] 2026-01-09 12:11:09,880 | INFO     | . stage-out = 0 s
[2026-01-09 07:11:54] 2026-01-09 12:11:09,880 | INFO     | . log creation = 0 s
[2026-01-09 07:11:54] 2026-01-09 12:11:09,880 | INFO     | ..............................
[2026-01-09 07:11:54] 2026-01-09 12:11:10,365 | INFO     | 
[2026-01-09 07:11:54] 2026-01-09 12:11:10,366 | INFO     | job summary report
[2026-01-09 07:11:54] 2026-01-09 12:11:10,366 | INFO     | --------------------------------------------------
[2026-01-09 07:11:54] 2026-01-09 12:11:10,366 | INFO     | PanDA job id: 6963188890
[2026-01-09 07:11:54] 2026-01-09 12:11:10,366 | INFO     | task id: 47898826
[2026-01-09 07:11:54] 2026-01-09 12:11:10,366 | INFO     | errors: (none)
[2026-01-09 07:11:54] 2026-01-09 12:11:10,367 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 07:11:54] 2026-01-09 12:11:10,367 | INFO     | pilot state: finished 
[2026-01-09 07:11:54] 2026-01-09 12:11:10,367 | INFO     | transexitcode: 0
[2026-01-09 07:11:54] 2026-01-09 12:11:10,367 | INFO     | exeerrorcode: 0
[2026-01-09 07:11:54] 2026-01-09 12:11:10,367 | INFO     | exeerrordiag: 
[2026-01-09 07:11:54] 2026-01-09 12:11:10,367 | INFO     | exitcode: 0
[2026-01-09 07:11:54] 2026-01-09 12:11:10,368 | INFO     | exitmsg: OK
[2026-01-09 07:11:54] 2026-01-09 12:11:10,368 | INFO     | cpuconsumptiontime: 64137 s
[2026-01-09 07:11:54] 2026-01-09 12:11:10,368 | INFO     | nevents: 400
[2026-01-09 07:11:54] 2026-01-09 12:11:10,368 | INFO     | neventsw: 0
[2026-01-09 07:11:54] 2026-01-09 12:11:10,368 | INFO     | pid: 30257
[2026-01-09 07:11:54] 2026-01-09 12:11:10,368 | INFO     | pgrp: 30257
[2026-01-09 07:11:54] 2026-01-09 12:11:10,368 | INFO     | corecount: 12
[2026-01-09 07:11:54] 2026-01-09 12:11:10,368 | INFO     | event service: False
[2026-01-09 07:11:54] 2026-01-09 12:11:10,368 | INFO     | sizes: {0: 2283800, 1: 2283999, 5: 2284261, 11: 2284317, 5889: 2311013, 5890: 2320195, 5896: 2320333}
[2026-01-09 07:11:54] 2026-01-09 12:11:10,369 | INFO     | --------------------------------------------------
[2026-01-09 07:11:54] 2026-01-09 12:11:10,369 | INFO     | 
[2026-01-09 07:11:54] 2026-01-09 12:11:10,369 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 07:11:54] 2026-01-09 12:11:10,392 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 07:11:54] 2026-01-09 12:11:10,392 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 07:11:54] 2026-01-09 12:11:10,393 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 07:11:54] 2026-01-09 12:11:10,393 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 07:11:54] 2026-01-09 12:11:10,393 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 07:11:54] 2026-01-09 12:11:10,393 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 07:11:54] 2026-01-09 12:11:10,393 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 07:11:54] 2026-01-09 12:11:10,394 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 07:11:54] 2026-01-09 12:11:10,394 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 07:11:54] 2026-01-09 12:11:10,394 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 07:11:54] 2026-01-09 12:11:10,394 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 07:11:54] 2026-01-09 12:11:10,394 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 07:11:54] 2026-01-09 12:11:10,394 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 07:11:54] 2026-01-09 12:11:10,395 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 07:11:54] 2026-01-09 12:11:10,395 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 07:11:54] 2026-01-09 12:11:10,395 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 07:11:54] 2026-01-09 12:11:10,395 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 07:11:54] 2026-01-09 12:11:10,395 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 07:11:54] 2026-01-09 12:11:10,395 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 07:11:54] 2026-01-09 12:11:10,396 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 07:11:54] 2026-01-09 12:11:10,396 | INFO     | job 6963188890 has completed (purged errors)
[2026-01-09 07:11:54] 2026-01-09 12:11:10,396 | INFO     | overall cleanup function is called
[2026-01-09 07:11:54] 2026-01-09 12:11:11,404 | INFO     | --- collectZombieJob: --- 10, [30257]
[2026-01-09 07:11:54] 2026-01-09 12:11:11,404 | INFO     | zombie collector waiting for pid 30257
[2026-01-09 07:11:54] 2026-01-09 12:11:11,404 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 07:11:54] 2026-01-09 12:11:11,405 | INFO     | collected zombie processes
[2026-01-09 07:11:54] 2026-01-09 12:11:11,405 | INFO     | will attempt to kill all subprocesses of pid=30257
[2026-01-09 07:11:54] 2026-01-09 12:11:11,495 | INFO     | process IDs to be killed: [30257] (in reverse order)
[2026-01-09 07:11:54] 2026-01-09 12:11:11,546 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 07:11:54] 2026-01-09 12:11:11,547 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 07:11:54] 2026-01-09 12:11:11,550 | INFO     | did not find any defunct processes belonging to 30257
[2026-01-09 07:11:54] 2026-01-09 12:11:11,552 | INFO     | did not find any defunct processes belonging to 30257
[2026-01-09 07:11:54] 2026-01-09 12:11:11,552 | INFO     | ready for new job
[2026-01-09 07:11:54] 2026-01-09 12:11:11,552 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 07:11:54] 2026-01-09 12:11:11,553 | INFO     | ***************************************
[2026-01-09 07:11:54] 2026-01-09 12:11:11,554 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 07:11:54] 2026-01-09 12:11:11,554 | INFO     | ***************************************
[2026-01-09 07:11:54] 2026-01-09 12:11:11,554 | INFO     | 
[2026-01-09 07:11:54] 2026-01-09 12:11:11,554 | INFO     | architecture information:
[2026-01-09 07:11:54] 2026-01-09 12:11:11,555 | INFO     | executing command: cat /etc/os-release
[2026-01-09 07:11:54] 2026-01-09 12:11:11,571 | INFO     | cat /etc/os-release:
[2026-01-09 07:11:54] NAME="CentOS Linux"
[2026-01-09 07:11:54] VERSION="7 (Core)"
[2026-01-09 07:11:54] ID="centos"
[2026-01-09 07:11:54] ID_LIKE="rhel fedora"
[2026-01-09 07:11:54] VERSION_ID="7"
[2026-01-09 07:11:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 07:11:54] ANSI_COLOR="0;31"
[2026-01-09 07:11:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 07:11:54] HOME_URL="https://www.centos.org/"
[2026-01-09 07:11:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 07:11:54] 
[2026-01-09 07:11:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 07:11:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 07:11:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 07:11:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 07:11:54] 
[2026-01-09 07:11:54] 2026-01-09 12:11:11,572 | INFO     | ***************************************
[2026-01-09 07:11:54] 2026-01-09 12:11:12,075 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 07:11:54] 2026-01-09 12:11:12,093 | INFO     | sufficient remaining disk space (29322379264 B)
[2026-01-09 07:11:54] 2026-01-09 12:11:12,093 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 07:11:54] 2026-01-09 12:11:12,093 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 07:11:54] 2026-01-09 12:11:12,093 | INFO     | update_server=False
[2026-01-09 07:11:54] 2026-01-09 12:11:12,094 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 07:11:54] 2026-01-09 12:11:12,094 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 07:11:54] 2026-01-09 12:11:12,153 | INFO     | all payload control threads have been joined
[2026-01-09 07:11:54] 2026-01-09 12:11:12,210 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 07:11:54] 2026-01-09 12:11:12,210 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 07:11:54] 2026-01-09 12:11:12,210 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 07:11:54] 2026-01-09 12:11:12,210 | INFO     | will abort loop
[2026-01-09 07:11:54] 2026-01-09 12:11:12,505 | INFO     | all data control threads have been joined
[2026-01-09 07:11:54] 2026-01-09 12:11:13,099 | INFO     | [job] retrieve thread has finished
[2026-01-09 07:11:54] 2026-01-09 12:11:13,129 | INFO     | [payload] failed_post thread has finished
[2026-01-09 07:11:54] 2026-01-09 12:11:13,159 | INFO     | [payload] control thread has finished
[2026-01-09 07:11:54] 2026-01-09 12:11:13,216 | INFO     | [job] job monitor thread has finished
[2026-01-09 07:11:54] 2026-01-09 12:11:13,363 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 07:11:54] 2026-01-09 12:11:13,371 | INFO     | [data] copytool_in thread has finished
[2026-01-09 07:11:54] 2026-01-09 12:11:13,386 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 07:11:54] 2026-01-09 12:11:13,486 | INFO     | all job control threads have been joined
[2026-01-09 07:11:54] 2026-01-09 12:11:13,511 | INFO     | [data] control thread has finished
[2026-01-09 07:11:54] 2026-01-09 12:11:13,705 | INFO     | [payload] validate_post thread has finished
[2026-01-09 07:11:54] 2026-01-09 12:11:14,100 | INFO     | [data] copytool_out thread has finished
[2026-01-09 07:11:54] 2026-01-09 12:11:14,258 | INFO     | [job] validate thread has finished
[2026-01-09 07:11:54] 2026-01-09 12:11:14,489 | INFO     | [job] control thread has finished
[2026-01-09 07:11:54] 2026-01-09 12:11:14,532 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 07:11:54] 2026-01-09 12:11:14,570 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 07:11:54] 2026-01-09 12:11:14,972 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 07:11:54] 2026-01-09 12:11:15,978 | INFO     | [job] queue monitor thread has finished
[2026-01-09 07:11:54] 2026-01-09 12:11:18,576 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 07:11:54] 2026-01-09 12:11:22,806 | INFO     | job.realtimelogging is not enabled
[2026-01-09 07:11:54] 2026-01-09 12:11:23,811 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 07:11:54] 2026-01-09 12:11:42,824 | INFO     | PID=23895 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 07:11:54] 2026-01-09 12:11:42,824 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 07:11:54] 2026-01-09 12:11:42,824 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 07:11:54] 2026-01-09 12:11:42,824 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 07:11:54] 2026-01-09 12:11:46,993 | INFO     | [monitor] cgroup control has ended
[2026-01-09 07:11:54] 2026-01-09 12:11:48,775 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140517548656448)>', '<ExcThread(monitor, started 140516222035712)>']
[2026-01-09 07:11:54] 2026-01-09 12:11:48,855 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 07:11:54] 2026-01-09 12:11:48,855 | INFO     | [monitor] control thread has ended
[2026-01-09 07:11:54] 2026-01-09 12:11:53,800 | INFO     | all workflow threads have been joined
[2026-01-09 07:11:54] 2026-01-09 12:11:53,800 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 07:11:54] 2026-01-09 12:11:53,808 | INFO     | traces error code: 0
[2026-01-09 07:11:54] 2026-01-09 12:11:53,808 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 07:11:54] 2026-01-09 12:11:53,906 [wrapper] ==== pilot stdout END ====
[2026-01-09 07:11:54] 2026-01-09 12:11:53,910 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 07:11:54] 2026-01-09 12:11:53,914 [wrapper] pilotpid: 23895
[2026-01-09 07:11:54] 2026-01-09 12:11:53,917 [wrapper] Pilot exit status: 0
[2026-01-09 07:11:54] 2026-01-09 12:11:53,933 [wrapper] pandaids: 6963188890
[2026-01-09 07:11:54] 2026-01-09 12:11:53,970 [wrapper] cleanup supervisor_pilot 31049 23896
[2026-01-09 07:11:54] 2026-01-09 12:11:53,973 [wrapper] Test setup, not cleaning
[2026-01-09 07:11:54] 2026-01-09 12:11:53,977 [wrapper] apfmon messages muted
[2026-01-09 07:11:54] 2026-01-09 12:11:53,981 [wrapper] ==== wrapper stdout END ====
[2026-01-09 07:11:54] 2026-01-09 12:11:53,985 [wrapper] ==== wrapper stderr END ====
[2026-01-09 07:11:54]  *** Error codes and diagnostics ***
[2026-01-09 07:11:54]     "exeErrorCode": 0,
[2026-01-09 07:11:54]     "exeErrorDiag": "",
[2026-01-09 07:11:54]     "pilotErrorCode": 0,
[2026-01-09 07:11:54]     "pilotErrorDiag": "",
[2026-01-09 07:11:54]  *** Listing of results directory ***
[2026-01-09 07:11:54] total 433044
[2026-01-09 07:11:54] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 23:21 queuedata.json
[2026-01-09 07:11:54] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-09 07:11:54] -rwx------ 1 boincer umatlas     36322 Jan  8 23:22 runpilot2-wrapper.sh
[2026-01-09 07:11:54] -rw-r--r-- 1 boincer umatlas       100 Jan  9 05:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 07:11:54] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 05:32 run_atlas
[2026-01-09 07:11:54] -rw-r--r-- 1 boincer umatlas       105 Jan  9 05:32 job.xml
[2026-01-09 07:11:54] -rw-r--r-- 2 boincer umatlas 222028643 Jan  9 05:32 EVNT.47898824._001452.pool.root.1
[2026-01-09 07:11:54] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 05:32 start_atlas.sh
[2026-01-09 07:11:54] drwxrwx--x 2 boincer umatlas      4096 Jan  9 05:32 shared
[2026-01-09 07:11:54] -rw-r--r-- 2 boincer umatlas    592397 Jan  9 05:32 input.tar.gz
[2026-01-09 07:11:54] -rw-r--r-- 1 boincer umatlas         0 Jan  9 05:32 boinc_lockfile
[2026-01-09 07:11:54] -rw-r--r-- 1 boincer umatlas      2520 Jan  9 05:32 pandaJob.out
[2026-01-09 07:11:54] -rw------- 1 boincer umatlas        57 Jan  9 05:32 setup.sh.local
[2026-01-09 07:11:54] -rw------- 1 boincer umatlas    989369 Jan  9 05:32 agis_schedconf.cvmfs.json
[2026-01-09 07:11:54] -rw------- 1 boincer umatlas   1516240 Jan  9 05:32 agis_ddmendpoints.agis.ALL.json
[2026-01-09 07:11:54] drwx------ 5 boincer umatlas      4096 Jan  9 05:32 pilot3
[2026-01-09 07:11:54] -rw-r--r-- 1 boincer umatlas      5953 Jan  9 07:03 init_data.xml
[2026-01-09 07:11:54] -rw-r--r-- 1 boincer umatlas       530 Jan  9 07:10 boinc_task_state.xml
[2026-01-09 07:11:54] -rw------- 1 boincer umatlas 215007260 Jan  9 07:10 HITS.47898826._037827.pool.root.1
[2026-01-09 07:11:54] -rw------- 1 boincer umatlas        95 Jan  9 07:10 pilot_heartbeat.json
[2026-01-09 07:11:54] -rw------- 1 boincer umatlas      1047 Jan  9 07:10 memory_monitor_summary.json
[2026-01-09 07:11:54] -rw------- 1 boincer umatlas    394456 Jan  9 07:11 log.47898826._037827.job.log.tgz.1
[2026-01-09 07:11:54] -rw------- 1 boincer umatlas      7849 Jan  9 07:11 heartbeat.json
[2026-01-09 07:11:54] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 07:11 boinc_mmap_file
[2026-01-09 07:11:54] -rw-r--r-- 1 boincer umatlas        27 Jan  9 07:11 wrapper_checkpoint.txt
[2026-01-09 07:11:54] -rw------- 1 boincer umatlas      5004 Jan  9 07:11 pilotlog.txt
[2026-01-09 07:11:54] -rw------- 1 boincer umatlas    841011 Jan  9 07:11 log.47898826._037827.job.log.1
[2026-01-09 07:11:54] -rw------- 1 boincer umatlas       357 Jan  9 07:11 output.list
[2026-01-09 07:11:54] -rw-r--r-- 1 boincer umatlas       620 Jan  9 07:11 runtime_log
[2026-01-09 07:11:54] -rw------- 1 boincer umatlas   1259520 Jan  9 07:11 result.tar.gz
[2026-01-09 07:11:54] -rw-r--r-- 1 boincer umatlas      9344 Jan  9 07:11 runtime_log.err
[2026-01-09 07:11:54] -rw------- 1 boincer umatlas       659 Jan  9 07:11 GO2LDm1BJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmP7lKDm9nyHSo.diag
[2026-01-09 07:11:54] -rw-r--r-- 1 boincer umatlas     21966 Jan  9 07:11 stderr.txt
[2026-01-09 07:11:54] HITS file was successfully produced:
[2026-01-09 07:11:54] -rw------- 1 boincer umatlas 215007260 Jan  9 07:10 shared/HITS.pool.root.1
[2026-01-09 07:11:54]  *** Contents of shared directory: ***
[2026-01-09 07:11:54] total 428636
[2026-01-09 07:11:54] -rw-r--r-- 2 boincer umatlas 222028643 Jan  9 05:32 ATLAS.root_0
[2026-01-09 07:11:54] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 05:32 start_atlas.sh
[2026-01-09 07:11:54] -rw-r--r-- 2 boincer umatlas    592397 Jan  9 05:32 input.tar.gz
[2026-01-09 07:11:54] -rw------- 1 boincer umatlas 215007260 Jan  9 07:10 HITS.pool.root.1
[2026-01-09 07:11:54] -rw------- 1 boincer umatlas   1259520 Jan  9 07:11 result.tar.gz
07:11:55 (20185): run_atlas exited; CPU time 64120.704013
07:11:55 (20185): called boinc_finish(0)

</stderr_txt>
]]>

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