Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:32:27 (4157980): wrapper (7.7.26015): starting
05:32:27 (4157980): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 05:32:27] Arguments: --nthreads 8
[2026-01-09 05:32:27] Threads: 8
[2026-01-09 05:32:27] Checking for CVMFS
[2026-01-09 05:32:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 05:32:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 05:32:28] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 05:32:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 05:32:28] 2.13.3.0 6658 21018 241188 154940 1 418 31456279 40960000 16252 16776704 0 21564052 99.703 19668758 46392 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 05:32:28] CVMFS is ok
[2026-01-09 05:32:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 05:32:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 05:32:28] Further information can be found at the LHC@home message board.
[2026-01-09 05:32:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 05:32:28] Checking for apptainer binary...
[2026-01-09 05:32:28] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 05:32:28] Running /usr/bin/apptainer --version
[2026-01-09 05:32:28] apptainer version 1.4.5-2.el9
[2026-01-09 05:32:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 05:32:29] c-206-38.aglt2.org
[2026-01-09 05:32:29] apptainer works
[2026-01-09 05:32:29] Set ATHENA_PROC_NUMBER=8
[2026-01-09 05:32:29] Set ATHENA_CORE_NUMBER=8
[2026-01-09 05:32:29] Starting ATLAS job with PandaID=6963188916
[2026-01-09 05:32:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 14:02:08]  *** The last 200 lines of the pilot log: ***
[2026-01-09 14:02:08] 2026-01-09 19:01:32,234 | INFO     | extracted standard info from prmon json
[2026-01-09 14:02:08] 2026-01-09 19:01:32,235 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 14:02:08] 2026-01-09 19:01:32,235 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 14:02:08] 2026-01-09 19:01:32,235 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 14:02:08] 2026-01-09 19:01:32,235 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 14:02:08] 2026-01-09 19:01:32,302 | INFO     | fitting pss+swap vs Time
[2026-01-09 14:02:08] 2026-01-09 19:01:32,303 | INFO     | sum of square deviations: 38294500558.28107
[2026-01-09 14:02:08] 2026-01-09 19:01:32,337 | INFO     | sum of deviations: 214906657501.75122
[2026-01-09 14:02:08] 2026-01-09 19:01:32,337 | INFO     | mean x: 1767970106.875502
[2026-01-09 14:02:08] 2026-01-09 19:01:32,337 | INFO     | mean y: 2496887.995983936
[2026-01-09 14:02:08] 2026-01-09 19:01:32,337 | INFO     | intersect: -9919255339.934961
[2026-01-09 14:02:08] 2026-01-09 19:01:32,338 | INFO     | chi2: 5.539039474045708
[2026-01-09 14:02:08] 2026-01-09 19:01:32,338 | INFO     | sum of square deviations: 37152573390.06895
[2026-01-09 14:02:08] 2026-01-09 19:01:32,388 | INFO     | sum of deviations: 243610580205.5172
[2026-01-09 14:02:08] 2026-01-09 19:01:32,389 | INFO     | mean x: 1767969954.3793104
[2026-01-09 14:02:08] 2026-01-09 19:01:32,389 | INFO     | mean y: 2500686.99188641
[2026-01-09 14:02:08] 2026-01-09 19:01:32,389 | INFO     | intersect: -11590133337.314829
[2026-01-09 14:02:08] 2026-01-09 19:01:32,389 | INFO     | chi2: 4.874927883113817
[2026-01-09 14:02:08] 2026-01-09 19:01:32,389 | INFO     | current chi2=4.874927883113817 (change=11.989652611138094 %)
[2026-01-09 14:02:08] 2026-01-09 19:01:32,389 | INFO     | right removable region: 492
[2026-01-09 14:02:08] 2026-01-09 19:01:32,390 | INFO     | sum of square deviations: 37152459320.06895
[2026-01-09 14:02:08] 2026-01-09 19:01:32,394 | INFO     | sum of deviations: 50575667254.37933
[2026-01-09 14:02:08] 2026-01-09 19:01:32,394 | INFO     | mean x: 1767970259.3793104
[2026-01-09 14:02:08] 2026-01-09 19:01:32,394 | INFO     | mean y: 2518816.939148073
[2026-01-09 14:02:08] 2026-01-09 19:01:32,394 | INFO     | intersect: -2404220257.41618
[2026-01-09 14:02:08] 2026-01-09 19:01:32,394 | INFO     | chi2: 1.576726694914281
[2026-01-09 14:02:08] 2026-01-09 19:01:32,394 | INFO     | current chi2=1.576726694914281 (change=71.53429394568582 %)
[2026-01-09 14:02:08] 2026-01-09 19:01:32,395 | INFO     | sum of square deviations: 36033348744.34202
[2026-01-09 14:02:08] 2026-01-09 19:01:32,399 | INFO     | sum of deviations: -10215084892.858635
[2026-01-09 14:02:08] 2026-01-09 19:01:32,399 | INFO     | mean x: 1767970411.8831968
[2026-01-09 14:02:08] 2026-01-09 19:01:32,399 | INFO     | mean y: 2527075.3709016396
[2026-01-09 14:02:08] 2026-01-09 19:01:32,399 | INFO     | intersect: 503728558.8518088
[2026-01-09 14:02:08] 2026-01-09 19:01:32,399 | INFO     | chi2: 0.8874273703730622
[2026-01-09 14:02:08] 2026-01-09 19:01:32,399 | INFO     | current chi2=0.8874273703730622 (change=43.71710879028992 %)
[2026-01-09 14:02:08] 2026-01-09 19:01:32,400 | INFO     | sum of square deviations: 34937025449.90487
[2026-01-09 14:02:08] 2026-01-09 19:01:32,404 | INFO     | sum of deviations: -18678185712.142883
[2026-01-09 14:02:08] 2026-01-09 19:01:32,404 | INFO     | mean x: 1767970564.3809524
[2026-01-09 14:02:08] 2026-01-09 19:01:32,404 | INFO     | mean y: 2528248.8757763975
[2026-01-09 14:02:08] 2026-01-09 19:01:32,404 | INFO     | intersect: 947728422.8991609
[2026-01-09 14:02:08] 2026-01-09 19:01:32,404 | INFO     | chi2: 0.8726540092706401
[2026-01-09 14:02:08] 2026-01-09 19:01:32,404 | INFO     | current chi2=0.8726540092706401 (change=1.6647403038979511 %)
[2026-01-09 14:02:08] 2026-01-09 19:01:32,404 | INFO     | left removable region: 30
[2026-01-09 14:02:08] 2026-01-09 19:01:32,405 | INFO     | sum of square deviations: 30574875583.01281
[2026-01-09 14:02:08] 2026-01-09 19:01:32,408 | INFO     | sum of deviations: 54731994663.883156
[2026-01-09 14:02:08] 2026-01-09 19:01:32,408 | INFO     | mean x: 1767970838.8961039
[2026-01-09 14:02:08] 2026-01-09 19:01:32,408 | INFO     | mean y: 2525981.6017316016
[2026-01-09 14:02:08] 2026-01-09 19:01:32,408 | INFO     | intersect: -3162313406.1380606
[2026-01-09 14:02:08] 2026-01-09 19:01:32,409 | INFO     | chi2: 0.06014020861629815
[2026-01-09 14:02:08] 2026-01-09 19:01:32,409 | INFO     | current memory leak: 1.79 B/s (using 462 data points, chi2=0.06)
[2026-01-09 14:02:08] 2026-01-09 19:01:32,410 | INFO     | could have reported an average CPU frequency of 3291 MHz (20 samples)
[2026-01-09 14:02:08] 2026-01-09 19:01:32,410 | INFO     | ..............................
[2026-01-09 14:02:08] 2026-01-09 19:01:32,410 | INFO     | . Timing measurements:
[2026-01-09 14:02:08] 2026-01-09 19:01:32,410 | INFO     | . get job = 0 s
[2026-01-09 14:02:08] 2026-01-09 19:01:32,410 | INFO     | . initial setup = 4 s
[2026-01-09 14:02:08] 2026-01-09 19:01:32,410 | INFO     | . payload setup = 52 s
[2026-01-09 14:02:08] 2026-01-09 19:01:32,410 | INFO     | . stage-in = 0 s
[2026-01-09 14:02:08] 2026-01-09 19:01:32,410 | INFO     | . payload execution = 30360 s
[2026-01-09 14:02:08] 2026-01-09 19:01:32,410 | INFO     | . stage-out = 2 s
[2026-01-09 14:02:08] 2026-01-09 19:01:32,410 | INFO     | . log creation = 0 s
[2026-01-09 14:02:08] 2026-01-09 19:01:32,410 | INFO     | ..............................
[2026-01-09 14:02:08] 2026-01-09 19:01:32,481 | INFO     | 
[2026-01-09 14:02:08] 2026-01-09 19:01:32,482 | INFO     | job summary report
[2026-01-09 14:02:08] 2026-01-09 19:01:32,482 | INFO     | --------------------------------------------------
[2026-01-09 14:02:08] 2026-01-09 19:01:32,482 | INFO     | PanDA job id: 6963188916
[2026-01-09 14:02:08] 2026-01-09 19:01:32,482 | INFO     | task id: 47898826
[2026-01-09 14:02:08] 2026-01-09 19:01:32,482 | INFO     | errors: (none)
[2026-01-09 14:02:08] 2026-01-09 19:01:32,482 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 14:02:08] 2026-01-09 19:01:32,482 | INFO     | pilot state: finished 
[2026-01-09 14:02:08] 2026-01-09 19:01:32,482 | INFO     | transexitcode: 0
[2026-01-09 14:02:08] 2026-01-09 19:01:32,482 | INFO     | exeerrorcode: 0
[2026-01-09 14:02:08] 2026-01-09 19:01:32,482 | INFO     | exeerrordiag: 
[2026-01-09 14:02:08] 2026-01-09 19:01:32,482 | INFO     | exitcode: 0
[2026-01-09 14:02:08] 2026-01-09 19:01:32,482 | INFO     | exitmsg: OK
[2026-01-09 14:02:08] 2026-01-09 19:01:32,483 | INFO     | cpuconsumptiontime: 47655 s
[2026-01-09 14:02:08] 2026-01-09 19:01:32,483 | INFO     | nevents: 400
[2026-01-09 14:02:08] 2026-01-09 19:01:32,483 | INFO     | neventsw: 0
[2026-01-09 14:02:08] 2026-01-09 19:01:32,483 | INFO     | pid: 4170647
[2026-01-09 14:02:08] 2026-01-09 19:01:32,483 | INFO     | pgrp: 4170647
[2026-01-09 14:02:08] 2026-01-09 19:01:32,483 | INFO     | corecount: 8
[2026-01-09 14:02:08] 2026-01-09 19:01:32,483 | INFO     | event service: False
[2026-01-09 14:02:08] 2026-01-09 19:01:32,483 | INFO     | sizes: {0: 2283143, 1: 2283999, 2: 2283999, 12: 2284027, 23: 2284055, 28: 2284345, 34: 2284501, 30417: 2322831, 30420: 2331829, 30422: 2331885, 30431: 2332079}
[2026-01-09 14:02:08] 2026-01-09 19:01:32,483 | INFO     | --------------------------------------------------
[2026-01-09 14:02:08] 2026-01-09 19:01:32,483 | INFO     | 
[2026-01-09 14:02:08] 2026-01-09 19:01:32,483 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-09 14:02:08] 2026-01-09 19:01:32,621 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 14:02:08] 2026-01-09 19:01:32,621 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 14:02:08] 2026-01-09 19:01:32,621 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 14:02:08] 2026-01-09 19:01:32,622 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 14:02:08] 2026-01-09 19:01:32,622 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 14:02:08] 2026-01-09 19:01:32,622 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 14:02:08] 2026-01-09 19:01:32,622 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 14:02:08] 2026-01-09 19:01:32,622 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 14:02:08] 2026-01-09 19:01:32,622 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 14:02:08] 2026-01-09 19:01:32,622 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 14:02:08] 2026-01-09 19:01:32,622 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 14:02:08] 2026-01-09 19:01:32,622 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 14:02:08] 2026-01-09 19:01:32,622 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 14:02:08] 2026-01-09 19:01:32,622 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 14:02:08] 2026-01-09 19:01:32,622 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 14:02:08] 2026-01-09 19:01:32,622 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 14:02:08] 2026-01-09 19:01:32,622 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 14:02:08] 2026-01-09 19:01:32,622 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 14:02:08] 2026-01-09 19:01:32,623 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 14:02:08] 2026-01-09 19:01:32,623 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 14:02:08] 2026-01-09 19:01:32,623 | INFO     | job 6963188916 has completed (purged errors)
[2026-01-09 14:02:08] 2026-01-09 19:01:32,623 | INFO     | overall cleanup function is called
[2026-01-09 14:02:08] 2026-01-09 19:01:33,557 | INFO     | PID=4161750 has CPU usage=9.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 14:02:08] 2026-01-09 19:01:33,558 | INFO     | .. there are 11 such processes running
[2026-01-09 14:02:08] 2026-01-09 19:01:33,639 | INFO     | --- collectZombieJob: --- 10, [4170647]
[2026-01-09 14:02:08] 2026-01-09 19:01:33,640 | INFO     | zombie collector waiting for pid 4170647
[2026-01-09 14:02:08] 2026-01-09 19:01:33,640 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 14:02:08] 2026-01-09 19:01:33,640 | INFO     | collected zombie processes
[2026-01-09 14:02:08] 2026-01-09 19:01:33,640 | INFO     | will attempt to kill all subprocesses of pid=4170647
[2026-01-09 14:02:08] 2026-01-09 19:01:33,971 | INFO     | process IDs to be killed: [4170647] (in reverse order)
[2026-01-09 14:02:08] 2026-01-09 19:01:34,060 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 14:02:08] 2026-01-09 19:01:34,061 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 14:02:08] 2026-01-09 19:01:34,138 | INFO     | did not find any defunct processes belonging to 4170647
[2026-01-09 14:02:08] 2026-01-09 19:01:34,258 | INFO     | did not find any defunct processes belonging to 4170647
[2026-01-09 14:02:08] 2026-01-09 19:01:34,258 | INFO     | ready for new job
[2026-01-09 14:02:08] 2026-01-09 19:01:34,258 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 14:02:08] 2026-01-09 19:01:34,263 | INFO     | ***************************************
[2026-01-09 14:02:08] 2026-01-09 19:01:34,263 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 14:02:08] 2026-01-09 19:01:34,263 | INFO     | ***************************************
[2026-01-09 14:02:08] 2026-01-09 19:01:34,263 | INFO     | 
[2026-01-09 14:02:08] 2026-01-09 19:01:34,279 | INFO     | architecture information:
[2026-01-09 14:02:08] 2026-01-09 19:01:34,302 | INFO     | executing command: cat /etc/os-release
[2026-01-09 14:02:08] 2026-01-09 19:01:34,447 | INFO     | cat /etc/os-release:
[2026-01-09 14:02:08] NAME="CentOS Linux"
[2026-01-09 14:02:08] VERSION="7 (Core)"
[2026-01-09 14:02:08] ID="centos"
[2026-01-09 14:02:08] ID_LIKE="rhel fedora"
[2026-01-09 14:02:08] VERSION_ID="7"
[2026-01-09 14:02:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 14:02:08] ANSI_COLOR="0;31"
[2026-01-09 14:02:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 14:02:08] HOME_URL="https://www.centos.org/"
[2026-01-09 14:02:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 14:02:08] 
[2026-01-09 14:02:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 14:02:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 14:02:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 14:02:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 14:02:08] 
[2026-01-09 14:02:08] 2026-01-09 19:01:34,447 | INFO     | ***************************************
[2026-01-09 14:02:08] 2026-01-09 19:01:34,951 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-09 14:02:08] 2026-01-09 19:01:35,002 | INFO     | sufficient remaining disk space (84870692864 B)
[2026-01-09 14:02:08] 2026-01-09 19:01:35,002 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 14:02:08] 2026-01-09 19:01:35,002 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 14:02:08] 2026-01-09 19:01:35,003 | INFO     | update_server=False
[2026-01-09 14:02:08] 2026-01-09 19:01:35,003 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 14:02:08] 2026-01-09 19:01:35,003 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 14:02:08] 2026-01-09 19:01:35,039 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 14:02:08] 2026-01-09 19:01:35,431 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 14:02:08] 2026-01-09 19:01:35,431 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 14:02:08] 2026-01-09 19:01:35,431 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 14:02:08] 2026-01-09 19:01:35,431 | INFO     | will abort loop
[2026-01-09 14:02:08] 2026-01-09 19:01:35,717 | INFO     | all payload control threads have been joined
[2026-01-09 14:02:08] 2026-01-09 19:01:35,749 | INFO     | all data control threads have been joined
[2026-01-09 14:02:08] 2026-01-09 19:01:36,023 | INFO     | [job] retrieve thread has finished
[2026-01-09 14:02:08] 2026-01-09 19:01:36,139 | INFO     | [payload] failed_post thread has finished
[2026-01-09 14:02:08] 2026-01-09 19:01:36,142 | INFO     | [payload] validate_post thread has finished
[2026-01-09 14:02:08] 2026-01-09 19:01:36,147 | INFO     | all job control threads have been joined
[2026-01-09 14:02:08] 2026-01-09 19:01:36,436 | INFO     | [job] job monitor thread has finished
[2026-01-09 14:02:08] 2026-01-09 19:01:36,723 | INFO     | [payload] control thread has finished
[2026-01-09 14:02:08] 2026-01-09 19:01:36,755 | INFO     | [data] control thread has finished
[2026-01-09 14:02:08] 2026-01-09 19:01:37,048 | INFO     | [data] copytool_out thread has finished
[2026-01-09 14:02:08] 2026-01-09 19:01:37,154 | INFO     | [job] control thread has finished
[2026-01-09 14:02:08] 2026-01-09 19:01:37,243 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 14:02:08] 2026-01-09 19:01:37,262 | INFO     | [job] validate thread has finished
[2026-01-09 14:02:08] 2026-01-09 19:01:37,265 | INFO     | [data] copytool_in thread has finished
[2026-01-09 14:02:08] 2026-01-09 19:01:37,266 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 14:02:08] 2026-01-09 19:01:37,292 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 14:02:08] 2026-01-09 19:01:37,514 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 14:02:08] 2026-01-09 19:01:38,520 | INFO     | [job] queue monitor thread has finished
[2026-01-09 14:02:08] 2026-01-09 19:01:39,031 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 14:02:08] 2026-01-09 19:01:45,773 | INFO     | job.realtimelogging is not enabled
[2026-01-09 14:02:08] 2026-01-09 19:01:46,780 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 14:02:08] 2026-01-09 19:01:54,404 | INFO     | [monitor] cgroup control has ended
[2026-01-09 14:02:08] 2026-01-09 19:01:55,161 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140110479845184)>', '<ExcThread(monitor, started 140110121121536)>']
[2026-01-09 14:02:08] 2026-01-09 19:02:00,186 | INFO     | all workflow threads have been joined
[2026-01-09 14:02:08] 2026-01-09 19:02:00,187 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 14:02:08] 2026-01-09 19:02:00,188 | INFO     | traces error code: 0
[2026-01-09 14:02:08] 2026-01-09 19:02:00,188 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 14:02:08] 2026-01-09 19:02:06,897 | INFO     | PID=4161750 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 14:02:08] 2026-01-09 19:02:06,897 | INFO     | .. there are 11 such processes running
[2026-01-09 14:02:08] 2026-01-09 19:02:06,898 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 14:02:08] 2026-01-09 19:02:06,898 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 14:02:08] 2026-01-09 19:02:06,898 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 14:02:08] 2026-01-09 19:02:06,898 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 14:02:08] 2026-01-09 19:02:06,898 | INFO     | [monitor] control thread has ended
[2026-01-09 14:02:08] 2026-01-09 19:02:07,519 [wrapper] ==== pilot stdout END ====
[2026-01-09 14:02:08] 2026-01-09 19:02:07,560 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 14:02:08] 2026-01-09 19:02:07,589 [wrapper] pilotpid: 4161750
[2026-01-09 14:02:08] 2026-01-09 19:02:07,611 [wrapper] Pilot exit status: 0
[2026-01-09 14:02:08] 2026-01-09 19:02:07,717 [wrapper] pandaids: 6963188916
[2026-01-09 14:02:08] 2026-01-09 19:02:07,794 [wrapper] cleanup supervisor_pilot  811789 4161751
[2026-01-09 14:02:08] 2026-01-09 19:02:07,798 [wrapper] Test setup, not cleaning
[2026-01-09 14:02:08] 2026-01-09 19:02:07,800 [wrapper] apfmon messages muted
[2026-01-09 14:02:08] 2026-01-09 19:02:07,803 [wrapper] ==== wrapper stdout END ====
[2026-01-09 14:02:08] 2026-01-09 19:02:07,806 [wrapper] ==== wrapper stderr END ====
[2026-01-09 14:02:08]  *** Error codes and diagnostics ***
[2026-01-09 14:02:08]     "exeErrorCode": 0,
[2026-01-09 14:02:08]     "exeErrorDiag": "",
[2026-01-09 14:02:08]     "pilotErrorCode": 0,
[2026-01-09 14:02:08]     "pilotErrorDiag": "",
[2026-01-09 14:02:08]  *** Listing of results directory ***
[2026-01-09 14:02:08] total 457908
[2026-01-09 14:02:08] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 23:21 queuedata.json
[2026-01-09 14:02:08] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-09 14:02:08] -rwx------. 1 boincer umatlas     36322 Jan  8 23:22 runpilot2-wrapper.sh
[2026-01-09 14:02:08] -rw-r--r--. 1 boincer umatlas       100 Jan  9 05:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 14:02:08] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 05:32 run_atlas
[2026-01-09 14:02:08] -rw-r--r--. 1 boincer umatlas       105 Jan  9 05:32 job.xml
[2026-01-09 14:02:08] -rw-r--r--. 2 boincer umatlas 225271768 Jan  9 05:32 EVNT.47898824._001453.pool.root.1
[2026-01-09 14:02:08] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 05:32 start_atlas.sh
[2026-01-09 14:02:08] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 05:32 shared
[2026-01-09 14:02:08] -rw-r--r--. 2 boincer umatlas    592399 Jan  9 05:32 input.tar.gz
[2026-01-09 14:02:08] -rw-r--r--. 1 boincer umatlas         0 Jan  9 05:32 boinc_lockfile
[2026-01-09 14:02:08] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 05:32 pandaJob.out
[2026-01-09 14:02:08] -rw-------. 1 boincer umatlas        57 Jan  9 05:32 setup.sh.local
[2026-01-09 14:02:08] -rw-------. 1 boincer umatlas    989369 Jan  9 05:32 agis_schedconf.cvmfs.json
[2026-01-09 14:02:08] drwx------. 5 boincer umatlas      4096 Jan  9 05:33 pilot3
[2026-01-09 14:02:08] -rw-r--r--. 1 boincer umatlas      6905 Jan  9 13:55 init_data.xml
[2026-01-09 14:02:08] -rw-------. 1 boincer umatlas 230431187 Jan  9 14:00 HITS.47898826._037853.pool.root.1
[2026-01-09 14:02:08] -rw-r--r--. 1 boincer umatlas       531 Jan  9 14:00 boinc_task_state.xml
[2026-01-09 14:02:08] -rw-------. 1 boincer umatlas      1030 Jan  9 14:01 memory_monitor_summary.json
[2026-01-09 14:02:08] -rw-------. 1 boincer umatlas   1516240 Jan  9 14:01 agis_ddmendpoints.agis.ALL.json
[2026-01-09 14:02:08] -rw-------. 1 boincer umatlas    660880 Jan  9 14:01 log.47898826._037853.job.log.tgz.1
[2026-01-09 14:02:08] -rw-------. 1 boincer umatlas      7768 Jan  9 14:01 heartbeat.json
[2026-01-09 14:02:08] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 14:01 boinc_mmap_file
[2026-01-09 14:02:08] -rw-r--r--. 1 boincer umatlas        28 Jan  9 14:01 wrapper_checkpoint.txt
[2026-01-09 14:02:08] -rw-------. 1 boincer umatlas       823 Jan  9 14:02 pilotlog.txt
[2026-01-09 14:02:08] -rw-------. 1 boincer umatlas        95 Jan  9 14:02 pilot_heartbeat.json
[2026-01-09 14:02:08] -rw-------. 1 boincer umatlas   3979500 Jan  9 14:02 log.47898826._037853.job.log.1
[2026-01-09 14:02:08] -rw-------. 1 boincer umatlas       357 Jan  9 14:02 output.list
[2026-01-09 14:02:08] -rw-r--r--. 1 boincer umatlas       620 Jan  9 14:02 runtime_log
[2026-01-09 14:02:08] -rw-------. 1 boincer umatlas   4659200 Jan  9 14:02 result.tar.gz
[2026-01-09 14:02:08] -rw-r--r--. 1 boincer umatlas      9343 Jan  9 14:02 runtime_log.err
[2026-01-09 14:02:08] -rw-------. 1 boincer umatlas       657 Jan  9 14:02 eDOMDm1BJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmh7lKDmS2lcQn.diag
[2026-01-09 14:02:08] -rw-r--r--. 1 boincer umatlas     21225 Jan  9 14:02 stderr.txt
[2026-01-09 14:02:08] HITS file was successfully produced:
[2026-01-09 14:02:08] -rw-------. 1 boincer umatlas 230431187 Jan  9 14:00 shared/HITS.pool.root.1
[2026-01-09 14:02:08]  *** Contents of shared directory: ***
[2026-01-09 14:02:08] total 450180
[2026-01-09 14:02:08] -rw-r--r--. 2 boincer umatlas 225271768 Jan  9 05:32 ATLAS.root_0
[2026-01-09 14:02:08] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 05:32 start_atlas.sh
[2026-01-09 14:02:08] -rw-r--r--. 2 boincer umatlas    592399 Jan  9 05:32 input.tar.gz
[2026-01-09 14:02:08] -rw-------. 1 boincer umatlas 230431187 Jan  9 14:00 HITS.pool.root.1
[2026-01-09 14:02:08] -rw-------. 1 boincer umatlas   4659200 Jan  9 14:02 result.tar.gz
14:02:09 (4157980): run_atlas exited; CPU time 48109.440543
14:02:09 (4157980): called boinc_finish(0)

</stderr_txt>
]]>

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