Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:17:30 (28865): wrapper (7.7.26015): starting
05:17:30 (28865): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 05:17:30] Arguments: --nthreads 8
[2026-01-09 05:17:30] Threads: 8
[2026-01-09 05:17:30] Checking for CVMFS
[2026-01-09 05:17:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 05:17:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 05:17:30] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 05:17:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 05:17:31] 2.11.2.0 2466 180899 138904 154940 2 57 11767922 18432000 1833 130560 0 118742112 99.979 7128184 30197 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 05:17:31] CVMFS is ok
[2026-01-09 05:17:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 05:17:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 05:17:31] Further information can be found at the LHC@home message board.
[2026-01-09 05:17:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 05:17:31] Checking for apptainer binary...
[2026-01-09 05:17:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 05:17:31] Running /usr/bin/apptainer --version
[2026-01-09 05:17:31] apptainer version 1.3.2-1.el7
[2026-01-09 05:17:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 05:17:31] c-206-20.aglt2.org
[2026-01-09 05:17:31] apptainer works
[2026-01-09 05:17:31] Set ATHENA_PROC_NUMBER=8
[2026-01-09 05:17:31] Set ATHENA_CORE_NUMBER=8
[2026-01-09 05:17:31] Starting ATLAS job with PandaID=6963189061
[2026-01-09 05:17:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 09:40:13]  *** The last 200 lines of the pilot log: ***
[2026-01-09 09:40:13] 2026-01-09 14:39:07,399 | INFO     | time since job start (15685s) is within the limit (349056.0s)
[2026-01-09 09:40:13] 2026-01-09 14:39:07,994 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 09:40:13] 2026-01-09 14:39:07,998 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2444.625
[2026-01-09 09:40:13] 2026-01-09 14:39:08,001 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963189061/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 09:40:13] 2026-01-09 14:39:08,001 | INFO     | extracted standard info from prmon json
[2026-01-09 09:40:13] 2026-01-09 14:39:08,001 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 09:40:13] 2026-01-09 14:39:08,001 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 09:40:13] 2026-01-09 14:39:08,002 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 09:40:13] 2026-01-09 14:39:08,002 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 09:40:13] 2026-01-09 14:39:08,006 | INFO     | fitting pss+swap vs Time
[2026-01-09 09:40:13] 2026-01-09 14:39:08,006 | INFO     | sum of square deviations: 5263458688.0
[2026-01-09 09:40:13] 2026-01-09 14:39:08,007 | INFO     | sum of deviations: -34973222780.99997
[2026-01-09 09:40:13] 2026-01-09 14:39:08,008 | INFO     | mean x: 1767961695.0
[2026-01-09 09:40:13] 2026-01-09 14:39:08,008 | INFO     | mean y: 2505136.7704280154
[2026-01-09 09:40:13] 2026-01-09 14:39:08,008 | INFO     | intersect: 11749784234.538721
[2026-01-09 09:40:13] 2026-01-09 14:39:08,008 | INFO     | chi2: 2.484933132950671
[2026-01-09 09:40:13] 2026-01-09 14:39:08,008 | INFO     | sum of square deviations: 4962187923.0
[2026-01-09 09:40:13] 2026-01-09 14:39:08,010 | INFO     | sum of deviations: -16283394777.999992
[2026-01-09 09:40:13] 2026-01-09 14:39:08,010 | INFO     | mean x: 1767961542.5
[2026-01-09 09:40:13] 2026-01-09 14:39:08,010 | INFO     | mean y: 2514454.507936508
[2026-01-09 09:40:13] 2026-01-09 14:39:08,010 | INFO     | intersect: 5804071387.773907
[2026-01-09 09:40:13] 2026-01-09 14:39:08,011 | INFO     | chi2: 1.6257349921441637
[2026-01-09 09:40:13] 2026-01-09 14:39:08,011 | INFO     | current chi2=1.6257349921441637 (change=34.57630828827472 %)
[2026-01-09 09:40:13] 2026-01-09 14:39:08,011 | INFO     | sum of square deviations: 4672638308.0
[2026-01-09 09:40:13] 2026-01-09 14:39:08,012 | INFO     | sum of deviations: -15798326986.999975
[2026-01-09 09:40:13] 2026-01-09 14:39:08,012 | INFO     | mean x: 1767961390.0
[2026-01-09 09:40:13] 2026-01-09 14:39:08,013 | INFO     | mean y: 2514710.016194332
[2026-01-09 09:40:13] 2026-01-09 14:39:08,013 | INFO     | intersect: 5980043955.494226
[2026-01-09 09:40:13] 2026-01-09 14:39:08,013 | INFO     | chi2: 1.625017089251671
[2026-01-09 09:40:13] 2026-01-09 14:39:08,013 | INFO     | current chi2=1.625017089251671 (change=0.04415866644697078 %)
[2026-01-09 09:40:13] 2026-01-09 14:39:08,013 | INFO     | right removable region: 246
[2026-01-09 09:40:13] 2026-01-09 14:39:08,014 | INFO     | sum of square deviations: 4962187923.0
[2026-01-09 09:40:13] 2026-01-09 14:39:08,015 | INFO     | sum of deviations: -71427776455.0
[2026-01-09 09:40:13] 2026-01-09 14:39:08,015 | INFO     | mean x: 1767961847.5
[2026-01-09 09:40:13] 2026-01-09 14:39:08,015 | INFO     | mean y: 2523416.3571428573
[2026-01-09 09:40:13] 2026-01-09 14:39:08,015 | INFO     | intersect: 25451294318.17589
[2026-01-09 09:40:13] 2026-01-09 14:39:08,016 | INFO     | chi2: 1.1401143821315336
[2026-01-09 09:40:13] 2026-01-09 14:39:08,016 | INFO     | current chi2=1.1401143821315336 (change=54.1189110075677 %)
[2026-01-09 09:40:13] 2026-01-09 14:39:08,016 | INFO     | sum of square deviations: 4672638308.0
[2026-01-09 09:40:13] 2026-01-09 14:39:08,017 | INFO     | sum of deviations: -75700188029.0
[2026-01-09 09:40:13] 2026-01-09 14:39:08,017 | INFO     | mean x: 1767962000.0
[2026-01-09 09:40:13] 2026-01-09 14:39:08,018 | INFO     | mean y: 2525666.299595142
[2026-01-09 09:40:13] 2026-01-09 14:39:08,018 | INFO     | intersect: 28644814456.122807
[2026-01-09 09:40:13] 2026-01-09 14:39:08,018 | INFO     | chi2: 1.1078990430115543
[2026-01-09 09:40:13] 2026-01-09 14:39:08,018 | INFO     | current chi2=1.1078990430115543 (change=2.8256234308482453 %)
[2026-01-09 09:40:13] 2026-01-09 14:39:08,018 | INFO     | left removable region: 20
[2026-01-09 09:40:13] 2026-01-09 14:39:08,019 | INFO     | sum of square deviations: 3579276412.5
[2026-01-09 09:40:13] 2026-01-09 14:39:08,020 | INFO     | sum of deviations: -42320901408.999985
[2026-01-09 09:40:13] 2026-01-09 14:39:08,020 | INFO     | mean x: 1767961969.5
[2026-01-09 09:40:13] 2026-01-09 14:39:08,020 | INFO     | mean y: 2528567.4159292034
[2026-01-09 09:40:13] 2026-01-09 14:39:08,020 | INFO     | intersect: 20906682251.878246
[2026-01-09 09:40:13] 2026-01-09 14:39:08,020 | INFO     | chi2: 0.2091383407594659
[2026-01-09 09:40:13] 2026-01-09 14:39:08,021 | INFO     | current memory leak: -11.82 B/s (using 226 data points, chi2=0.21)
[2026-01-09 09:40:13] 2026-01-09 14:39:08,021 | INFO     | could have reported an average CPU frequency of 2590 MHz (12 samples)
[2026-01-09 09:40:13] 2026-01-09 14:39:08,022 | INFO     | ..............................
[2026-01-09 09:40:13] 2026-01-09 14:39:08,022 | INFO     | . Timing measurements:
[2026-01-09 09:40:13] 2026-01-09 14:39:08,022 | INFO     | . get job = 0 s
[2026-01-09 09:40:13] 2026-01-09 14:39:08,022 | INFO     | . initial setup = 2 s
[2026-01-09 09:40:13] 2026-01-09 14:39:08,022 | INFO     | . payload setup = 4 s
[2026-01-09 09:40:13] 2026-01-09 14:39:08,022 | INFO     | . stage-in = 0 s
[2026-01-09 09:40:13] 2026-01-09 14:39:08,023 | INFO     | . payload execution = 15650 s
[2026-01-09 09:40:13] 2026-01-09 14:39:08,023 | INFO     | . stage-out = 2 s
[2026-01-09 09:40:13] 2026-01-09 14:39:08,023 | INFO     | . log creation = 0 s
[2026-01-09 09:40:13] 2026-01-09 14:39:08,023 | INFO     | ..............................
[2026-01-09 09:40:13] 2026-01-09 14:39:08,181 | INFO     | 
[2026-01-09 09:40:13] 2026-01-09 14:39:08,181 | INFO     | job summary report
[2026-01-09 09:40:13] 2026-01-09 14:39:08,181 | INFO     | --------------------------------------------------
[2026-01-09 09:40:13] 2026-01-09 14:39:08,181 | INFO     | PanDA job id: 6963189061
[2026-01-09 09:40:13] 2026-01-09 14:39:08,182 | INFO     | task id: 47898826
[2026-01-09 09:40:13] 2026-01-09 14:39:08,182 | INFO     | errors: (none)
[2026-01-09 09:40:13] 2026-01-09 14:39:08,182 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 09:40:13] 2026-01-09 14:39:08,182 | INFO     | pilot state: finished 
[2026-01-09 09:40:13] 2026-01-09 14:39:08,182 | INFO     | transexitcode: 0
[2026-01-09 09:40:13] 2026-01-09 14:39:08,182 | INFO     | exeerrorcode: 0
[2026-01-09 09:40:13] 2026-01-09 14:39:08,183 | INFO     | exeerrordiag: 
[2026-01-09 09:40:13] 2026-01-09 14:39:08,183 | INFO     | exitcode: 0
[2026-01-09 09:40:13] 2026-01-09 14:39:08,183 | INFO     | exitmsg: OK
[2026-01-09 09:40:13] 2026-01-09 14:39:08,183 | INFO     | cpuconsumptiontime: 118830 s
[2026-01-09 09:40:13] 2026-01-09 14:39:08,183 | INFO     | nevents: 400
[2026-01-09 09:40:13] 2026-01-09 14:39:08,183 | INFO     | neventsw: 0
[2026-01-09 09:40:13] 2026-01-09 14:39:08,184 | INFO     | pid: 6781
[2026-01-09 09:40:13] 2026-01-09 14:39:08,184 | INFO     | pgrp: 6781
[2026-01-09 09:40:13] 2026-01-09 14:39:08,184 | INFO     | corecount: 8
[2026-01-09 09:40:13] 2026-01-09 14:39:08,184 | INFO     | event service: False
[2026-01-09 09:40:13] 2026-01-09 14:39:08,184 | INFO     | sizes: {0: 2283800, 1: 2283999, 4: 2284261, 11: 2284289, 15658: 2315530, 15659: 2315529, 15661: 2324711, 15665: 2324767, 15670: 2324961}
[2026-01-09 09:40:13] 2026-01-09 14:39:08,184 | INFO     | --------------------------------------------------
[2026-01-09 09:40:13] 2026-01-09 14:39:08,185 | INFO     | 
[2026-01-09 09:40:13] 2026-01-09 14:39:08,185 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 09:40:13] 2026-01-09 14:39:08,206 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 09:40:13] 2026-01-09 14:39:08,206 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 09:40:13] 2026-01-09 14:39:08,206 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 09:40:13] 2026-01-09 14:39:08,207 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 09:40:13] 2026-01-09 14:39:08,207 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 09:40:13] 2026-01-09 14:39:08,207 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 09:40:13] 2026-01-09 14:39:08,207 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 09:40:13] 2026-01-09 14:39:08,207 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 09:40:13] 2026-01-09 14:39:08,212 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 09:40:13] 2026-01-09 14:39:08,212 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 09:40:13] 2026-01-09 14:39:08,212 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 09:40:13] 2026-01-09 14:39:08,212 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 09:40:13] 2026-01-09 14:39:08,212 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 09:40:13] 2026-01-09 14:39:08,213 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 09:40:13] 2026-01-09 14:39:08,213 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 09:40:13] 2026-01-09 14:39:08,213 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 09:40:13] 2026-01-09 14:39:08,213 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 09:40:13] 2026-01-09 14:39:08,213 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 09:40:13] 2026-01-09 14:39:08,214 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 09:40:13] 2026-01-09 14:39:08,214 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 09:40:13] 2026-01-09 14:39:08,214 | INFO     | job 6963189061 has completed (purged errors)
[2026-01-09 09:40:13] 2026-01-09 14:39:08,214 | INFO     | overall cleanup function is called
[2026-01-09 09:40:13] 2026-01-09 14:39:09,223 | INFO     | --- collectZombieJob: --- 10, [6781]
[2026-01-09 09:40:13] 2026-01-09 14:39:09,223 | INFO     | zombie collector waiting for pid 6781
[2026-01-09 09:40:13] 2026-01-09 14:39:09,223 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 09:40:13] 2026-01-09 14:39:09,223 | INFO     | collected zombie processes
[2026-01-09 09:40:13] 2026-01-09 14:39:09,223 | INFO     | will attempt to kill all subprocesses of pid=6781
[2026-01-09 09:40:13] 2026-01-09 14:39:09,356 | INFO     | process IDs to be killed: [6781] (in reverse order)
[2026-01-09 09:40:13] 2026-01-09 14:39:09,413 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 09:40:13] 2026-01-09 14:39:09,413 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 09:40:13] 2026-01-09 14:39:09,419 | INFO     | did not find any defunct processes belonging to 6781
[2026-01-09 09:40:13] 2026-01-09 14:39:09,424 | INFO     | did not find any defunct processes belonging to 6781
[2026-01-09 09:40:13] 2026-01-09 14:39:09,424 | INFO     | ready for new job
[2026-01-09 09:40:13] 2026-01-09 14:39:09,424 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 09:40:13] 2026-01-09 14:39:09,427 | INFO     | ***************************************
[2026-01-09 09:40:13] 2026-01-09 14:39:09,427 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 09:40:13] 2026-01-09 14:39:09,427 | INFO     | ***************************************
[2026-01-09 09:40:13] 2026-01-09 14:39:09,427 | INFO     | 
[2026-01-09 09:40:13] 2026-01-09 14:39:09,428 | INFO     | architecture information:
[2026-01-09 09:40:13] 2026-01-09 14:39:09,429 | INFO     | executing command: cat /etc/os-release
[2026-01-09 09:40:13] 2026-01-09 14:39:09,444 | INFO     | cat /etc/os-release:
[2026-01-09 09:40:13] NAME="CentOS Linux"
[2026-01-09 09:40:13] VERSION="7 (Core)"
[2026-01-09 09:40:13] ID="centos"
[2026-01-09 09:40:13] ID_LIKE="rhel fedora"
[2026-01-09 09:40:13] VERSION_ID="7"
[2026-01-09 09:40:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 09:40:13] ANSI_COLOR="0;31"
[2026-01-09 09:40:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 09:40:13] HOME_URL="https://www.centos.org/"
[2026-01-09 09:40:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 09:40:13] 
[2026-01-09 09:40:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 09:40:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 09:40:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 09:40:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 09:40:13] 
[2026-01-09 09:40:13] 2026-01-09 14:39:09,444 | INFO     | ***************************************
[2026-01-09 09:40:13] 2026-01-09 14:39:09,947 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 09:40:13] 2026-01-09 14:39:09,969 | INFO     | sufficient remaining disk space (28206694400 B)
[2026-01-09 09:40:13] 2026-01-09 14:39:09,969 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 09:40:13] 2026-01-09 14:39:09,969 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 09:40:13] 2026-01-09 14:39:09,969 | INFO     | update_server=False
[2026-01-09 09:40:13] 2026-01-09 14:39:09,970 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 09:40:13] 2026-01-09 14:39:09,970 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 09:40:13] 2026-01-09 14:39:09,970 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 09:40:13] 2026-01-09 14:39:09,971 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 09:40:13] 2026-01-09 14:39:09,971 | INFO     | aborting loop
[2026-01-09 09:40:13] 2026-01-09 14:39:10,421 | INFO     | all job control threads have been joined
[2026-01-09 09:40:13] 2026-01-09 14:39:10,441 | INFO     | all payload control threads have been joined
[2026-01-09 09:40:13] 2026-01-09 14:39:10,976 | INFO     | [job] queue monitor thread has finished
[2026-01-09 09:40:13] 2026-01-09 14:39:10,976 | INFO     | [job] job monitor thread has finished
[2026-01-09 09:40:13] 2026-01-09 14:39:10,977 | INFO     | [job] retrieve thread has finished
[2026-01-09 09:40:13] 2026-01-09 14:39:11,021 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 09:40:13] 2026-01-09 14:39:11,024 | INFO     | [data] copytool_in thread has finished
[2026-01-09 09:40:13] 2026-01-09 14:39:11,061 | INFO     | all data control threads have been joined
[2026-01-09 09:40:13] 2026-01-09 14:39:11,066 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 09:40:13] 2026-01-09 14:39:11,141 | INFO     | [payload] failed_post thread has finished
[2026-01-09 09:40:13] 2026-01-09 14:39:11,426 | INFO     | [job] control thread has finished
[2026-01-09 09:40:13] 2026-01-09 14:39:11,444 | INFO     | [payload] control thread has finished
[2026-01-09 09:40:13] 2026-01-09 14:39:11,973 | INFO     | [data] copytool_out thread has finished
[2026-01-09 09:40:13] 2026-01-09 14:39:12,048 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 09:40:13] 2026-01-09 14:39:12,067 | INFO     | [data] control thread has finished
[2026-01-09 09:40:13] 2026-01-09 14:39:12,199 | INFO     | [payload] validate_post thread has finished
[2026-01-09 09:40:13] 2026-01-09 14:39:12,448 | INFO     | [job] validate thread has finished
[2026-01-09 09:40:13] 2026-01-09 14:39:13,148 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 09:40:13] 2026-01-09 14:39:17,154 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 09:40:13] 2026-01-09 14:39:20,179 | INFO     | job.realtimelogging is not enabled
[2026-01-09 09:40:13] 2026-01-09 14:39:21,184 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 09:40:13] 2026-01-09 14:39:40,598 | INFO     | PID=32552 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 09:40:13] 2026-01-09 14:39:40,598 | INFO     | .. there are 3 such processes running
[2026-01-09 09:40:13] 2026-01-09 14:39:40,599 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 09:40:13] 2026-01-09 14:39:40,599 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 09:40:13] 2026-01-09 14:39:40,599 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 09:40:13] 2026-01-09 14:40:07,819 | INFO     | [monitor] cgroup control has ended
[2026-01-09 09:40:13] 2026-01-09 14:40:08,015 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140256321910592)>', '<ExcThread(monitor, started 140255873181440)>']
[2026-01-09 09:40:13] 2026-01-09 14:40:08,734 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 09:40:13] 2026-01-09 14:40:08,734 | INFO     | [monitor] control thread has ended
[2026-01-09 09:40:13] 2026-01-09 14:40:13,040 | INFO     | all workflow threads have been joined
[2026-01-09 09:40:13] 2026-01-09 14:40:13,040 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 09:40:13] 2026-01-09 14:40:13,040 | INFO     | traces error code: 0
[2026-01-09 09:40:13] 2026-01-09 14:40:13,041 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 09:40:13] 2026-01-09 14:40:13,174 [wrapper] ==== pilot stdout END ====
[2026-01-09 09:40:13] 2026-01-09 14:40:13,177 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 09:40:13] 2026-01-09 14:40:13,179 [wrapper] pilotpid: 32552
[2026-01-09 09:40:13] 2026-01-09 14:40:13,182 [wrapper] Pilot exit status: 0
[2026-01-09 09:40:13] 2026-01-09 14:40:13,190 [wrapper] pandaids: 6963189061
[2026-01-09 09:40:13] 2026-01-09 14:40:13,229 [wrapper] cleanup supervisor_pilot 29739 32553
[2026-01-09 09:40:13] 2026-01-09 14:40:13,230 [wrapper] Test setup, not cleaning
[2026-01-09 09:40:13] 2026-01-09 14:40:13,232 [wrapper] apfmon messages muted
[2026-01-09 09:40:13] 2026-01-09 14:40:13,234 [wrapper] ==== wrapper stdout END ====
[2026-01-09 09:40:13] 2026-01-09 14:40:13,236 [wrapper] ==== wrapper stderr END ====
[2026-01-09 09:40:13]  *** Error codes and diagnostics ***
[2026-01-09 09:40:13]     "exeErrorCode": 0,
[2026-01-09 09:40:13]     "exeErrorDiag": "",
[2026-01-09 09:40:13]     "pilotErrorCode": 0,
[2026-01-09 09:40:13]     "pilotErrorDiag": "",
[2026-01-09 09:40:13]  *** Listing of results directory ***
[2026-01-09 09:40:13] total 443384
[2026-01-09 09:40:13] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 23:21 queuedata.json
[2026-01-09 09:40:13] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-09 09:40:13] -rwx------ 1 boincer umatlas     36322 Jan  8 23:22 runpilot2-wrapper.sh
[2026-01-09 09:40:13] -rw-r--r-- 1 boincer umatlas       100 Jan  9 05:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 09:40:13] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 05:17 run_atlas
[2026-01-09 09:40:13] -rw-r--r-- 1 boincer umatlas       105 Jan  9 05:17 job.xml
[2026-01-09 09:40:13] -rw-r--r-- 2 boincer umatlas 222733385 Jan  9 05:17 EVNT.47898824._001458.pool.root.1
[2026-01-09 09:40:13] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 05:17 start_atlas.sh
[2026-01-09 09:40:13] drwxrwx--x 2 boincer umatlas      4096 Jan  9 05:17 shared
[2026-01-09 09:40:13] -rw-r--r-- 2 boincer umatlas    592400 Jan  9 05:17 input.tar.gz
[2026-01-09 09:40:13] -rw-r--r-- 1 boincer umatlas         0 Jan  9 05:17 boinc_lockfile
[2026-01-09 09:40:13] -rw-r--r-- 1 boincer umatlas      2520 Jan  9 05:17 pandaJob.out
[2026-01-09 09:40:13] -rw------- 1 boincer umatlas        57 Jan  9 05:17 setup.sh.local
[2026-01-09 09:40:13] -rw------- 1 boincer umatlas    989369 Jan  9 05:17 agis_schedconf.cvmfs.json
[2026-01-09 09:40:13] drwx------ 5 boincer umatlas      4096 Jan  9 05:17 pilot3
[2026-01-09 09:40:13] -rw-r--r-- 1 boincer umatlas      5953 Jan  9 09:37 init_data.xml
[2026-01-09 09:40:13] -rw------- 1 boincer umatlas 222026743 Jan  9 09:38 HITS.47898826._037998.pool.root.1
[2026-01-09 09:40:13] -rw-r--r-- 1 boincer umatlas       531 Jan  9 09:38 boinc_task_state.xml
[2026-01-09 09:40:13] -rw------- 1 boincer umatlas      1054 Jan  9 09:38 memory_monitor_summary.json
[2026-01-09 09:40:13] -rw------- 1 boincer umatlas   1516240 Jan  9 09:38 agis_ddmendpoints.agis.ALL.json
[2026-01-09 09:40:13] -rw------- 1 boincer umatlas    501188 Jan  9 09:38 log.47898826._037998.job.log.tgz.1
[2026-01-09 09:40:13] -rw------- 1 boincer umatlas      7861 Jan  9 09:39 heartbeat.json
[2026-01-09 09:40:13] -rw------- 1 boincer umatlas        95 Jan  9 09:39 pilot_heartbeat.json
[2026-01-09 09:40:13] -rw-r--r-- 1 boincer umatlas        29 Jan  9 09:39 wrapper_checkpoint.txt
[2026-01-09 09:40:13] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 09:39 boinc_mmap_file
[2026-01-09 09:40:13] -rw------- 1 boincer umatlas      4893 Jan  9 09:40 pilotlog.txt
[2026-01-09 09:40:13] -rw------- 1 boincer umatlas   2174841 Jan  9 09:40 log.47898826._037998.job.log.1
[2026-01-09 09:40:13] -rw------- 1 boincer umatlas       357 Jan  9 09:40 output.list
[2026-01-09 09:40:13] -rw-r--r-- 1 boincer umatlas       620 Jan  9 09:40 runtime_log
[2026-01-09 09:40:13] -rw------- 1 boincer umatlas   2693120 Jan  9 09:40 result.tar.gz
[2026-01-09 09:40:13] -rw------- 1 boincer umatlas       663 Jan  9 09:40 WLJNDm1BJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm8tgKDmEww5un.diag
[2026-01-09 09:40:13] -rw-r--r-- 1 boincer umatlas      9343 Jan  9 09:40 runtime_log.err
[2026-01-09 09:40:13] -rw-r--r-- 1 boincer umatlas     21051 Jan  9 09:40 stderr.txt
[2026-01-09 09:40:13] HITS file was successfully produced:
[2026-01-09 09:40:13] -rw------- 1 boincer umatlas 222026743 Jan  9 09:38 shared/HITS.pool.root.1
[2026-01-09 09:40:13]  *** Contents of shared directory: ***
[2026-01-09 09:40:13] total 437572
[2026-01-09 09:40:13] -rw-r--r-- 2 boincer umatlas 222733385 Jan  9 05:17 ATLAS.root_0
[2026-01-09 09:40:13] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 05:17 start_atlas.sh
[2026-01-09 09:40:13] -rw-r--r-- 2 boincer umatlas    592400 Jan  9 05:17 input.tar.gz
[2026-01-09 09:40:13] -rw------- 1 boincer umatlas 222026743 Jan  9 09:38 HITS.pool.root.1
[2026-01-09 09:40:13] -rw------- 1 boincer umatlas   2693120 Jan  9 09:40 result.tar.gz
09:40:14 (28865): run_atlas exited; CPU time 119034.877357
09:40:14 (28865): called boinc_finish(0)

</stderr_txt>
]]>

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