Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:10:34 (4090890): wrapper (7.7.26015): starting
05:10:34 (4090890): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 05:10:34] Arguments: --nthreads 8
[2026-01-09 05:10:34] Threads: 8
[2026-01-09 05:10:34] Checking for CVMFS
[2026-01-09 05:10:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 05:10:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 05:10:34] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 05:10:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 05:10:35] 2.13.3.0 6658 20996 246428 154938 3 494 31420508 40960000 15488 16776704 0 21463536 99.702 19665903 46396 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 05:10:35] CVMFS is ok
[2026-01-09 05:10:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 05:10:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 05:10:35] Further information can be found at the LHC@home message board.
[2026-01-09 05:10:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 05:10:35] Checking for apptainer binary...
[2026-01-09 05:10:35] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 05:10:35] Running /usr/bin/apptainer --version
[2026-01-09 05:10:35] apptainer version 1.4.5-2.el9
[2026-01-09 05:10:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 05:10:36] c-206-38.aglt2.org
[2026-01-09 05:10:36] apptainer works
[2026-01-09 05:10:36] Set ATHENA_PROC_NUMBER=8
[2026-01-09 05:10:36] Set ATHENA_CORE_NUMBER=8
[2026-01-09 05:10:36] Starting ATLAS job with PandaID=6963188959
[2026-01-09 05:10:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 11:04:54]  *** The last 200 lines of the pilot log: ***
[2026-01-09 11:04:54] 2026-01-09 16:03:56,556 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 11:04:54] 2026-01-09 16:03:56,557 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 11:04:54] 2026-01-09 16:03:56,557 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 11:04:54] 2026-01-09 16:03:56,590 | INFO     | fitting pss+swap vs Time
[2026-01-09 11:04:54] 2026-01-09 16:03:56,591 | INFO     | sum of square deviations: 12732699914.84061
[2026-01-09 11:04:54] 2026-01-09 16:03:56,627 | INFO     | sum of deviations: 171039195634.7101
[2026-01-09 11:04:54] 2026-01-09 16:03:56,627 | INFO     | mean x: 1767964065.2753623
[2026-01-09 11:04:54] 2026-01-09 16:03:56,627 | INFO     | mean y: 2466038.51884058
[2026-01-09 11:04:54] 2026-01-09 16:03:56,627 | INFO     | intersect: -23746711563.893494
[2026-01-09 11:04:54] 2026-01-09 16:03:56,628 | INFO     | chi2: 5.560980631210677
[2026-01-09 11:04:54] 2026-01-09 16:03:56,628 | INFO     | sum of square deviations: 12187100054.455915
[2026-01-09 11:04:54] 2026-01-09 16:03:56,661 | INFO     | sum of deviations: 168176126709.42657
[2026-01-09 11:04:54] 2026-01-09 16:03:56,661 | INFO     | mean x: 1767963912.7794118
[2026-01-09 11:04:54] 2026-01-09 16:03:56,661 | INFO     | mean y: 2465238.2323529413
[2026-01-09 11:04:54] 2026-01-09 16:03:56,661 | INFO     | intersect: -24394587521.219864
[2026-01-09 11:04:54] 2026-01-09 16:03:56,662 | INFO     | chi2: 5.565254937638358
[2026-01-09 11:04:54] 2026-01-09 16:03:56,662 | INFO     | current chi2=5.565254937638358 (change=-0.07686245846086613 %)
[2026-01-09 11:04:54] 2026-01-09 16:03:56,662 | INFO     | right removable region: 339
[2026-01-09 11:04:54] 2026-01-09 16:03:56,662 | INFO     | sum of square deviations: 12187042104.455914
[2026-01-09 11:04:54] 2026-01-09 16:03:56,665 | INFO     | sum of deviations: 53844304893.86765
[2026-01-09 11:04:54] 2026-01-09 16:03:56,665 | INFO     | mean x: 1767964217.7794118
[2026-01-09 11:04:54] 2026-01-09 16:03:56,665 | INFO     | mean y: 2498770.838235294
[2026-01-09 11:04:54] 2026-01-09 16:03:56,665 | INFO     | intersect: -7808650445.488594
[2026-01-09 11:04:54] 2026-01-09 16:03:56,666 | INFO     | chi2: 1.1564194844595512
[2026-01-09 11:04:54] 2026-01-09 16:03:56,666 | INFO     | current chi2=1.1564194844595512 (change=79.20475611856631 %)
[2026-01-09 11:04:54] 2026-01-09 16:03:56,666 | INFO     | sum of square deviations: 11657198544.05972
[2026-01-09 11:04:54] 2026-01-09 16:03:56,669 | INFO     | sum of deviations: -20572000.88060449
[2026-01-09 11:04:54] 2026-01-09 16:03:56,669 | INFO     | mean x: 1767964370.283582
[2026-01-09 11:04:54] 2026-01-09 16:03:56,669 | INFO     | mean y: 2514215.567164179
[2026-01-09 11:04:54] 2026-01-09 16:03:56,669 | INFO     | intersect: 5634224.585187205
[2026-01-09 11:04:54] 2026-01-09 16:03:56,669 | INFO     | chi2: 0.08421528413139474
[2026-01-09 11:04:54] 2026-01-09 16:03:56,669 | INFO     | current chi2=0.08421528413139474 (change=92.71758343204046 %)
[2026-01-09 11:04:54] 2026-01-09 16:03:56,670 | INFO     | sum of square deviations: 11142957105.724241
[2026-01-09 11:04:54] 2026-01-09 16:03:56,672 | INFO     | sum of deviations: -6096735027.875767
[2026-01-09 11:04:54] 2026-01-09 16:03:56,672 | INFO     | mean x: 1767964522.7848485
[2026-01-09 11:04:54] 2026-01-09 16:03:56,672 | INFO     | mean y: 2516006.184848485
[2026-01-09 11:04:54] 2026-01-09 16:03:56,672 | INFO     | intersect: 969836541.6436876
[2026-01-09 11:04:54] 2026-01-09 16:03:56,673 | INFO     | chi2: 0.0621151968811065
[2026-01-09 11:04:54] 2026-01-09 16:03:56,673 | INFO     | current chi2=0.0621151968811065 (change=26.242370940418784 %)
[2026-01-09 11:04:54] 2026-01-09 16:03:56,673 | INFO     | sum of square deviations: 10644044662.8123
[2026-01-09 11:04:54] 2026-01-09 16:03:56,675 | INFO     | sum of deviations: -342471692.5230764
[2026-01-09 11:04:54] 2026-01-09 16:03:56,676 | INFO     | mean x: 1767964675.2892308
[2026-01-09 11:04:54] 2026-01-09 16:03:56,676 | INFO     | mean y: 2514246.707692308
[2026-01-09 11:04:54] 2026-01-09 16:03:56,676 | INFO     | intersect: 59398436.303655416
[2026-01-09 11:04:54] 2026-01-09 16:03:56,676 | INFO     | chi2: 0.05199189754473206
[2026-01-09 11:04:54] 2026-01-09 16:03:56,676 | INFO     | current chi2=0.05199189754473206 (change=16.29762094411654 %)
[2026-01-09 11:04:54] 2026-01-09 16:03:56,676 | INFO     | left removable region: 40
[2026-01-09 11:04:54] 2026-01-09 16:03:56,681 | INFO     | sum of square deviations: 8288199284.44814
[2026-01-09 11:04:54] 2026-01-09 16:03:56,684 | INFO     | sum of deviations: 14816040370.67559
[2026-01-09 11:04:54] 2026-01-09 16:03:56,684 | INFO     | mean x: 1767965102.3143814
[2026-01-09 11:04:54] 2026-01-09 16:03:56,684 | INFO     | mean y: 2508885.35451505
[2026-01-09 11:04:54] 2026-01-09 16:03:56,684 | INFO     | intersect: -3157917334.0036488
[2026-01-09 11:04:54] 2026-01-09 16:03:56,684 | INFO     | chi2: 0.021090215747727487
[2026-01-09 11:04:54] 2026-01-09 16:03:56,684 | INFO     | current memory leak: 1.79 B/s (using 299 data points, chi2=0.02)
[2026-01-09 11:04:54] 2026-01-09 16:03:56,685 | INFO     | could have reported an average CPU frequency of 3287 MHz (15 samples)
[2026-01-09 11:04:54] 2026-01-09 16:03:56,686 | INFO     | ..............................
[2026-01-09 11:04:54] 2026-01-09 16:03:56,686 | INFO     | . Timing measurements:
[2026-01-09 11:04:54] 2026-01-09 16:03:56,686 | INFO     | . get job = 0 s
[2026-01-09 11:04:54] 2026-01-09 16:03:56,686 | INFO     | . initial setup = 5 s
[2026-01-09 11:04:54] 2026-01-09 16:03:56,686 | INFO     | . payload setup = 26 s
[2026-01-09 11:04:54] 2026-01-09 16:03:56,686 | INFO     | . stage-in = 0 s
[2026-01-09 11:04:54] 2026-01-09 16:03:56,686 | INFO     | . payload execution = 21074 s
[2026-01-09 11:04:54] 2026-01-09 16:03:56,686 | INFO     | . stage-out = 4 s
[2026-01-09 11:04:54] 2026-01-09 16:03:56,686 | INFO     | . log creation = 0 s
[2026-01-09 11:04:54] 2026-01-09 16:03:56,686 | INFO     | ..............................
[2026-01-09 11:04:54] 2026-01-09 16:03:56,761 | INFO     | 
[2026-01-09 11:04:54] 2026-01-09 16:03:56,762 | INFO     | job summary report
[2026-01-09 11:04:54] 2026-01-09 16:03:56,762 | INFO     | --------------------------------------------------
[2026-01-09 11:04:54] 2026-01-09 16:03:56,762 | INFO     | PanDA job id: 6963188959
[2026-01-09 11:04:54] 2026-01-09 16:03:56,762 | INFO     | task id: 47898826
[2026-01-09 11:04:54] 2026-01-09 16:03:56,762 | INFO     | errors: (none)
[2026-01-09 11:04:54] 2026-01-09 16:03:56,762 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 11:04:54] 2026-01-09 16:03:56,762 | INFO     | pilot state: finished 
[2026-01-09 11:04:54] 2026-01-09 16:03:56,762 | INFO     | transexitcode: 0
[2026-01-09 11:04:54] 2026-01-09 16:03:56,762 | INFO     | exeerrorcode: 0
[2026-01-09 11:04:54] 2026-01-09 16:03:56,762 | INFO     | exeerrordiag: 
[2026-01-09 11:04:54] 2026-01-09 16:03:56,762 | INFO     | exitcode: 0
[2026-01-09 11:04:54] 2026-01-09 16:03:56,762 | INFO     | exitmsg: OK
[2026-01-09 11:04:54] 2026-01-09 16:03:56,762 | INFO     | cpuconsumptiontime: 45605 s
[2026-01-09 11:04:54] 2026-01-09 16:03:56,762 | INFO     | nevents: 400
[2026-01-09 11:04:54] 2026-01-09 16:03:56,762 | INFO     | neventsw: 0
[2026-01-09 11:04:54] 2026-01-09 16:03:56,762 | INFO     | pid: 4103861
[2026-01-09 11:04:54] 2026-01-09 16:03:56,762 | INFO     | pgrp: 4103861
[2026-01-09 11:04:54] 2026-01-09 16:03:56,763 | INFO     | corecount: 8
[2026-01-09 11:04:54] 2026-01-09 16:03:56,763 | INFO     | event service: False
[2026-01-09 11:04:54] 2026-01-09 16:03:56,763 | INFO     | sizes: {0: 2283971, 1: 2283999, 11: 2283999, 19: 2284289, 22: 2284317, 21105: 2318292, 21106: 2318419, 21111: 2327473, 21113: 2327529, 21129: 2327723}
[2026-01-09 11:04:54] 2026-01-09 16:03:56,763 | INFO     | --------------------------------------------------
[2026-01-09 11:04:54] 2026-01-09 16:03:56,763 | INFO     | 
[2026-01-09 11:04:54] 2026-01-09 16:03:56,763 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-01-09 11:04:54] 2026-01-09 16:03:56,849 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 11:04:54] 2026-01-09 16:03:56,849 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 11:04:54] 2026-01-09 16:03:56,849 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 11:04:54] 2026-01-09 16:03:56,849 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 11:04:54] 2026-01-09 16:03:56,849 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 11:04:54] 2026-01-09 16:03:56,849 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 11:04:54] 2026-01-09 16:03:56,849 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 11:04:54] 2026-01-09 16:03:56,849 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 11:04:54] 2026-01-09 16:03:56,849 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 11:04:54] 2026-01-09 16:03:56,849 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 11:04:54] 2026-01-09 16:03:56,850 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 11:04:54] 2026-01-09 16:03:56,850 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 11:04:54] 2026-01-09 16:03:56,850 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 11:04:54] 2026-01-09 16:03:56,850 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 11:04:54] 2026-01-09 16:03:56,850 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 11:04:54] 2026-01-09 16:03:56,850 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 11:04:54] 2026-01-09 16:03:56,850 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 11:04:54] 2026-01-09 16:03:56,850 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 11:04:54] 2026-01-09 16:03:56,850 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 11:04:54] 2026-01-09 16:03:56,850 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 11:04:54] 2026-01-09 16:03:56,850 | INFO     | job 6963188959 has completed (purged errors)
[2026-01-09 11:04:54] 2026-01-09 16:03:56,850 | INFO     | overall cleanup function is called
[2026-01-09 11:04:54] 2026-01-09 16:03:57,908 | INFO     | --- collectZombieJob: --- 10, [4103861]
[2026-01-09 11:04:54] 2026-01-09 16:03:57,908 | INFO     | zombie collector waiting for pid 4103861
[2026-01-09 11:04:54] 2026-01-09 16:03:57,908 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 11:04:54] 2026-01-09 16:03:57,908 | INFO     | collected zombie processes
[2026-01-09 11:04:54] 2026-01-09 16:03:57,908 | INFO     | will attempt to kill all subprocesses of pid=4103861
[2026-01-09 11:04:54] 2026-01-09 16:03:59,380 | INFO     | process IDs to be killed: [4103861] (in reverse order)
[2026-01-09 11:04:54] 2026-01-09 16:03:59,485 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 11:04:54] 2026-01-09 16:03:59,486 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 11:04:54] 2026-01-09 16:03:59,496 | INFO     | did not find any defunct processes belonging to 4103861
[2026-01-09 11:04:54] 2026-01-09 16:03:59,507 | INFO     | did not find any defunct processes belonging to 4103861
[2026-01-09 11:04:54] 2026-01-09 16:03:59,507 | INFO     | ready for new job
[2026-01-09 11:04:54] 2026-01-09 16:03:59,507 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 11:04:54] 2026-01-09 16:03:59,510 | INFO     | ***************************************
[2026-01-09 11:04:54] 2026-01-09 16:03:59,511 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 11:04:54] 2026-01-09 16:03:59,511 | INFO     | ***************************************
[2026-01-09 11:04:54] 2026-01-09 16:03:59,511 | INFO     | 
[2026-01-09 11:04:54] 2026-01-09 16:03:59,539 | INFO     | architecture information:
[2026-01-09 11:04:54] 2026-01-09 16:03:59,561 | INFO     | executing command: cat /etc/os-release
[2026-01-09 11:04:54] 2026-01-09 16:03:59,615 | INFO     | cat /etc/os-release:
[2026-01-09 11:04:54] NAME="CentOS Linux"
[2026-01-09 11:04:54] VERSION="7 (Core)"
[2026-01-09 11:04:54] ID="centos"
[2026-01-09 11:04:54] ID_LIKE="rhel fedora"
[2026-01-09 11:04:54] VERSION_ID="7"
[2026-01-09 11:04:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 11:04:54] ANSI_COLOR="0;31"
[2026-01-09 11:04:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 11:04:54] HOME_URL="https://www.centos.org/"
[2026-01-09 11:04:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 11:04:54] 
[2026-01-09 11:04:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 11:04:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 11:04:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 11:04:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 11:04:54] 
[2026-01-09 11:04:54] 2026-01-09 16:03:59,616 | INFO     | ***************************************
[2026-01-09 11:04:54] 2026-01-09 16:04:00,119 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-01-09 11:04:54] 2026-01-09 16:04:00,290 | INFO     | sufficient remaining disk space (85019590656 B)
[2026-01-09 11:04:54] 2026-01-09 16:04:00,290 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 11:04:54] 2026-01-09 16:04:00,290 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 11:04:54] 2026-01-09 16:04:00,290 | INFO     | update_server=False
[2026-01-09 11:04:54] 2026-01-09 16:04:00,290 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 11:04:54] 2026-01-09 16:04:00,292 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 11:04:54] 2026-01-09 16:04:00,298 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 11:04:54] 2026-01-09 16:04:00,298 | INFO     | aborting loop
[2026-01-09 11:04:54] 2026-01-09 16:04:00,319 | INFO     | all data control threads have been joined
[2026-01-09 11:04:54] 2026-01-09 16:04:00,341 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 11:04:54] 2026-01-09 16:04:00,869 | INFO     | all job control threads have been joined
[2026-01-09 11:04:54] 2026-01-09 16:04:00,954 | INFO     | all payload control threads have been joined
[2026-01-09 11:04:54] 2026-01-09 16:04:01,297 | INFO     | [job] retrieve thread has finished
[2026-01-09 11:04:54] 2026-01-09 16:04:01,303 | INFO     | [job] job monitor thread has finished
[2026-01-09 11:04:54] 2026-01-09 16:04:01,335 | INFO     | [data] control thread has finished
[2026-01-09 11:04:54] 2026-01-09 16:04:01,426 | INFO     | [payload] failed_post thread has finished
[2026-01-09 11:04:54] 2026-01-09 16:04:01,803 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 11:04:54] 2026-01-09 16:04:01,876 | INFO     | [job] control thread has finished
[2026-01-09 11:04:54] 2026-01-09 16:04:01,961 | INFO     | [payload] control thread has finished
[2026-01-09 11:04:54] 2026-01-09 16:04:02,277 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 11:04:54] 2026-01-09 16:04:02,278 | INFO     | [data] copytool_in thread has finished
[2026-01-09 11:04:54] 2026-01-09 16:04:02,298 | INFO     | [data] copytool_out thread has finished
[2026-01-09 11:04:54] 2026-01-09 16:04:02,352 | INFO     | [payload] validate_post thread has finished
[2026-01-09 11:04:54] 2026-01-09 16:04:02,736 | INFO     | [job] validate thread has finished
[2026-01-09 11:04:54] 2026-01-09 16:04:02,738 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 11:04:54] 2026-01-09 16:04:02,745 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 11:04:54] 2026-01-09 16:04:02,749 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 11:04:54] 2026-01-09 16:04:02,808 | INFO     | [job] queue monitor thread has finished
[2026-01-09 11:04:54] 2026-01-09 16:04:04,349 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 11:04:54] 2026-01-09 16:04:28,998 | INFO     | PID=4094930 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 11:04:54] 2026-01-09 16:04:29,000 | INFO     | .. there are 11 such processes running
[2026-01-09 11:04:54] 2026-01-09 16:04:29,000 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 11:04:54] 2026-01-09 16:04:29,000 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 11:04:54] 2026-01-09 16:04:29,000 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 11:04:54] 2026-01-09 16:04:48,106 | INFO     | [monitor] cgroup control has ended
[2026-01-09 11:04:54] 2026-01-09 16:04:49,274 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140497237505856)>', '<ExcThread(monitor, started 140496852719360)>']
[2026-01-09 11:04:54] 2026-01-09 16:04:50,124 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 11:04:54] 2026-01-09 16:04:50,125 | INFO     | [monitor] control thread has ended
[2026-01-09 11:04:54] 2026-01-09 16:04:54,300 | INFO     | all workflow threads have been joined
[2026-01-09 11:04:54] 2026-01-09 16:04:54,301 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 11:04:54] 2026-01-09 16:04:54,302 | INFO     | traces error code: 0
[2026-01-09 11:04:54] 2026-01-09 16:04:54,302 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 11:04:54] 2026-01-09 16:04:54,437 [wrapper] ==== pilot stdout END ====
[2026-01-09 11:04:54] 2026-01-09 16:04:54,439 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 11:04:54] 2026-01-09 16:04:54,440 [wrapper] pilotpid: 4094930
[2026-01-09 11:04:54] 2026-01-09 16:04:54,443 [wrapper] Pilot exit status: 0
[2026-01-09 11:04:54] 2026-01-09 16:04:54,450 [wrapper] pandaids: 6963188959
[2026-01-09 11:04:54] 2026-01-09 16:04:54,519 [wrapper] cleanup supervisor_pilot  562286 4094931
[2026-01-09 11:04:54] 2026-01-09 16:04:54,524 [wrapper] Test setup, not cleaning
[2026-01-09 11:04:54] 2026-01-09 16:04:54,528 [wrapper] apfmon messages muted
[2026-01-09 11:04:54] 2026-01-09 16:04:54,530 [wrapper] ==== wrapper stdout END ====
[2026-01-09 11:04:54] 2026-01-09 16:04:54,543 [wrapper] ==== wrapper stderr END ====
[2026-01-09 11:04:54]  *** Error codes and diagnostics ***
[2026-01-09 11:04:54]     "exeErrorCode": 0,
[2026-01-09 11:04:54]     "exeErrorDiag": "",
[2026-01-09 11:04:54]     "pilotErrorCode": 0,
[2026-01-09 11:04:54]     "pilotErrorDiag": "",
[2026-01-09 11:04:54]  *** Listing of results directory ***
[2026-01-09 11:04:54] total 439568
[2026-01-09 11:04:54] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 23:21 queuedata.json
[2026-01-09 11:04:54] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-09 11:04:54] -rwx------. 1 boincer umatlas     36322 Jan  8 23:22 runpilot2-wrapper.sh
[2026-01-09 11:04:54] -rw-r--r--. 1 boincer umatlas       100 Jan  9 05:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 11:04:54] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 05:10 run_atlas
[2026-01-09 11:04:54] -rw-r--r--. 1 boincer umatlas       105 Jan  9 05:10 job.xml
[2026-01-09 11:04:54] -rw-r--r--. 2 boincer umatlas 224370675 Jan  9 05:10 EVNT.47898824._001454.pool.root.1
[2026-01-09 11:04:54] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 05:10 start_atlas.sh
[2026-01-09 11:04:54] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 05:10 shared
[2026-01-09 11:04:54] -rw-r--r--. 2 boincer umatlas    592394 Jan  9 05:10 input.tar.gz
[2026-01-09 11:04:54] -rw-r--r--. 1 boincer umatlas         0 Jan  9 05:10 boinc_lockfile
[2026-01-09 11:04:54] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 05:10 pandaJob.out
[2026-01-09 11:04:54] -rw-------. 1 boincer umatlas        57 Jan  9 05:10 setup.sh.local
[2026-01-09 11:04:54] -rw-------. 1 boincer umatlas    989751 Jan  9 05:11 agis_schedconf.cvmfs.json
[2026-01-09 11:04:54] drwx------. 5 boincer umatlas      4096 Jan  9 05:11 pilot3
[2026-01-09 11:04:54] -rw-r--r--. 1 boincer umatlas      6906 Jan  9 11:01 init_data.xml
[2026-01-09 11:04:54] -rw-r--r--. 1 boincer umatlas       531 Jan  9 11:02 boinc_task_state.xml
[2026-01-09 11:04:54] -rw-------. 1 boincer umatlas 215153858 Jan  9 11:02 HITS.47898826._037896.pool.root.1
[2026-01-09 11:04:54] -rw-------. 1 boincer umatlas      1034 Jan  9 11:03 memory_monitor_summary.json
[2026-01-09 11:04:54] -rw-------. 1 boincer umatlas   1516240 Jan  9 11:03 agis_ddmendpoints.agis.ALL.json
[2026-01-09 11:04:54] -rw-------. 1 boincer umatlas    561723 Jan  9 11:03 log.47898826._037896.job.log.tgz.1
[2026-01-09 11:04:54] -rw-------. 1 boincer umatlas        95 Jan  9 11:03 pilot_heartbeat.json
[2026-01-09 11:04:54] -rw-------. 1 boincer umatlas      7785 Jan  9 11:03 heartbeat.json
[2026-01-09 11:04:54] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 11:04 boinc_mmap_file
[2026-01-09 11:04:54] -rw-r--r--. 1 boincer umatlas        28 Jan  9 11:04 wrapper_checkpoint.txt
[2026-01-09 11:04:54] -rw-------. 1 boincer umatlas      4824 Jan  9 11:04 pilotlog.txt
[2026-01-09 11:04:54] -rw-------. 1 boincer umatlas   2780425 Jan  9 11:04 log.47898826._037896.job.log.1
[2026-01-09 11:04:54] -rw-------. 1 boincer umatlas       357 Jan  9 11:04 output.list
[2026-01-09 11:04:54] -rw-r--r--. 1 boincer umatlas       620 Jan  9 11:04 runtime_log
[2026-01-09 11:04:54] -rw-------. 1 boincer umatlas   3358720 Jan  9 11:04 result.tar.gz
[2026-01-09 11:04:54] -rw-r--r--. 1 boincer umatlas      9343 Jan  9 11:04 runtime_log.err
[2026-01-09 11:04:54] -rw-------. 1 boincer umatlas       655 Jan  9 11:04 k5oLDm1BJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm1sgKDmuevhtm.diag
[2026-01-09 11:04:54] -rw-r--r--. 1 boincer umatlas     21034 Jan  9 11:04 stderr.txt
[2026-01-09 11:04:54] HITS file was successfully produced:
[2026-01-09 11:04:54] -rw-------. 1 boincer umatlas 215153858 Jan  9 11:02 shared/HITS.pool.root.1
[2026-01-09 11:04:54]  *** Contents of shared directory: ***
[2026-01-09 11:04:54] total 433104
[2026-01-09 11:04:54] -rw-r--r--. 2 boincer umatlas 224370675 Jan  9 05:10 ATLAS.root_0
[2026-01-09 11:04:54] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 05:10 start_atlas.sh
[2026-01-09 11:04:54] -rw-r--r--. 2 boincer umatlas    592394 Jan  9 05:10 input.tar.gz
[2026-01-09 11:04:54] -rw-------. 1 boincer umatlas 215153858 Jan  9 11:02 HITS.pool.root.1
[2026-01-09 11:04:54] -rw-------. 1 boincer umatlas   3358720 Jan  9 11:04 result.tar.gz
11:05:17 (4090890): run_atlas exited; CPU time 45905.352604
11:05:17 (4090890): called boinc_finish(0)

</stderr_txt>
]]>

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