Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:17:57 (29573): wrapper (7.7.26015): starting
05:17:57 (29573): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 05:17:57] Arguments: --nthreads 8
[2026-01-09 05:17:57] Threads: 8
[2026-01-09 05:17:57] Checking for CVMFS
[2026-01-09 05:17:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 05:17:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 05:17:57] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 05:17:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 05:17:57] 2.11.2.0 16446 180894 135540 154940 2 9 16655808 18432001 1833 130560 0 121883290 99.979 6948260 32370 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 05:17:57] CVMFS is ok
[2026-01-09 05:17:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 05:17:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 05:17:57] Further information can be found at the LHC@home message board.
[2026-01-09 05:17:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 05:17:57] Checking for apptainer binary...
[2026-01-09 05:17:57] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 05:17:57] Running /usr/bin/apptainer --version
[2026-01-09 05:17:57] apptainer version 1.3.2-1.el7
[2026-01-09 05:17:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 05:17:58] c-206-26.aglt2.org
[2026-01-09 05:17:58] apptainer works
[2026-01-09 05:17:58] Set ATHENA_PROC_NUMBER=8
[2026-01-09 05:17:58] Set ATHENA_CORE_NUMBER=8
[2026-01-09 05:17:58] Starting ATLAS job with PandaID=6963188292
[2026-01-09 05:17:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 09:41:41]  *** The last 200 lines of the pilot log: ***
[2026-01-09 09:41:42] 2026-01-09 14:40:40,200 | INFO     | job 6963188292 has finished - writing final server update
[2026-01-09 09:41:42] 2026-01-09 14:40:40,200 | INFO     | total number of processed events: 400 (read)
[2026-01-09 09:41:42] 2026-01-09 14:40:40,201 | INFO     | executing command: lscpu
[2026-01-09 09:41:42] 2026-01-09 14:40:40,232 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 09:41:42] 2026-01-09 14:40:40,932 | INFO     | PID=850 has CPU usage=11.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-09 09:41:42] 2026-01-09 14:40:40,932 | INFO     | .. there are 3 such processes running
[2026-01-09 09:41:42] 2026-01-09 14:40:41,933 | INFO     | time since job start (15751s) is within the limit (349056.0s)
[2026-01-09 09:41:42] 2026-01-09 14:40:42,551 | INFO     | monitor loop #1134: job 0:6963188292 is in state 'finished'
[2026-01-09 09:41:42] 2026-01-09 14:40:42,551 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 09:41:42] 2026-01-09 14:40:43,529 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 09:41:42] 2026-01-09 14:40:43,535 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2444.5833333333335
[2026-01-09 09:41:42] 2026-01-09 14:40:43,539 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963188292/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 09:41:42] 2026-01-09 14:40:43,540 | INFO     | extracted standard info from prmon json
[2026-01-09 09:41:42] 2026-01-09 14:40:43,540 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 09:41:42] 2026-01-09 14:40:43,541 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 09:41:42] 2026-01-09 14:40:43,541 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 09:41:42] 2026-01-09 14:40:43,541 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 09:41:42] 2026-01-09 14:40:43,549 | INFO     | fitting pss+swap vs Time
[2026-01-09 09:41:42] 2026-01-09 14:40:43,549 | INFO     | sum of square deviations: 5325139844.5
[2026-01-09 09:41:42] 2026-01-09 14:40:43,552 | INFO     | sum of deviations: -21600026739.000015
[2026-01-09 09:41:42] 2026-01-09 14:40:43,552 | INFO     | mean x: 1767961754.5
[2026-01-09 09:41:42] 2026-01-09 14:40:43,553 | INFO     | mean y: 2513285.3333333335
[2026-01-09 09:41:42] 2026-01-09 14:40:43,553 | INFO     | intersect: 7173784329.073409
[2026-01-09 09:41:42] 2026-01-09 14:40:43,553 | INFO     | chi2: 1.5806609130991442
[2026-01-09 09:41:42] 2026-01-09 14:40:43,554 | INFO     | sum of square deviations: 5021496942.0
[2026-01-09 09:41:42] 2026-01-09 14:40:43,556 | INFO     | sum of deviations: -21109600951.999992
[2026-01-09 09:41:42] 2026-01-09 14:40:43,556 | INFO     | mean x: 1767961602.0
[2026-01-09 09:41:42] 2026-01-09 14:40:43,557 | INFO     | mean y: 2513531.671936759
[2026-01-09 09:41:42] 2026-01-09 14:40:43,557 | INFO     | intersect: 7434752234.144223
[2026-01-09 09:41:42] 2026-01-09 14:40:43,557 | INFO     | chi2: 1.5794681770576597
[2026-01-09 09:41:42] 2026-01-09 14:40:43,558 | INFO     | current chi2=1.5794681770576597 (change=0.07545805881578713 %)
[2026-01-09 09:41:42] 2026-01-09 14:40:43,558 | INFO     | right removable region: 252
[2026-01-09 09:41:42] 2026-01-09 14:40:43,558 | INFO     | sum of square deviations: 5021496942.0
[2026-01-09 09:41:42] 2026-01-09 14:40:43,561 | INFO     | sum of deviations: -58528851631.00002
[2026-01-09 09:41:42] 2026-01-09 14:40:43,561 | INFO     | mean x: 1767961907.0
[2026-01-09 09:41:42] 2026-01-09 14:40:43,561 | INFO     | mean y: 2531659.750988142
[2026-01-09 09:41:42] 2026-01-09 14:40:43,561 | INFO     | intersect: 20609291225.524883
[2026-01-09 09:41:42] 2026-01-09 14:40:43,562 | INFO     | chi2: 0.213404942015028
[2026-01-09 09:41:42] 2026-01-09 14:40:43,562 | INFO     | current chi2=0.213404942015028 (change=86.49900555859178 %)
[2026-01-09 09:41:42] 2026-01-09 14:40:43,563 | INFO     | sum of square deviations: 4729621702.0
[2026-01-09 09:41:42] 2026-01-09 14:40:43,565 | INFO     | sum of deviations: -57539030494.999985
[2026-01-09 09:41:42] 2026-01-09 14:40:43,565 | INFO     | mean x: 1767962059.5
[2026-01-09 09:41:42] 2026-01-09 14:40:43,565 | INFO     | mean y: 2531115.629032258
[2026-01-09 09:41:42] 2026-01-09 14:40:43,565 | INFO     | intersect: 21510979204.100163
[2026-01-09 09:41:42] 2026-01-09 14:40:43,566 | INFO     | chi2: 0.19856407098591575
[2026-01-09 09:41:42] 2026-01-09 14:40:43,566 | INFO     | current chi2=0.19856407098591575 (change=6.954323966905673 %)
[2026-01-09 09:41:42] 2026-01-09 14:40:43,566 | INFO     | left removable region: 20
[2026-01-09 09:41:42] 2026-01-09 14:40:43,567 | INFO     | sum of square deviations: 3871990738.0
[2026-01-09 09:41:42] 2026-01-09 14:40:43,569 | INFO     | sum of deviations: -41567471987.0
[2026-01-09 09:41:42] 2026-01-09 14:40:43,569 | INFO     | mean x: 1767962181.5
[2026-01-09 09:41:42] 2026-01-09 14:40:43,569 | INFO     | mean y: 2523326.3448275863
[2026-01-09 09:41:42] 2026-01-09 14:40:43,570 | INFO     | intersect: 18982351385.42131
[2026-01-09 09:41:42] 2026-01-09 14:40:43,570 | INFO     | chi2: 0.17513562342752564
[2026-01-09 09:41:42] 2026-01-09 14:40:43,570 | INFO     | current memory leak: -10.74 B/s (using 232 data points, chi2=0.18)
[2026-01-09 09:41:42] 2026-01-09 14:40:43,571 | INFO     | could have reported an average CPU frequency of 2573 MHz (12 samples)
[2026-01-09 09:41:42] 2026-01-09 14:40:43,571 | INFO     | ..............................
[2026-01-09 09:41:42] 2026-01-09 14:40:43,571 | INFO     | . Timing measurements:
[2026-01-09 09:41:42] 2026-01-09 14:40:43,572 | INFO     | . get job = 0 s
[2026-01-09 09:41:42] 2026-01-09 14:40:43,572 | INFO     | . initial setup = 3 s
[2026-01-09 09:41:42] 2026-01-09 14:40:43,572 | INFO     | . payload setup = 4 s
[2026-01-09 09:41:42] 2026-01-09 14:40:43,572 | INFO     | . stage-in = 0 s
[2026-01-09 09:41:42] 2026-01-09 14:40:43,572 | INFO     | . payload execution = 15717 s
[2026-01-09 09:41:42] 2026-01-09 14:40:43,573 | INFO     | . stage-out = 2 s
[2026-01-09 09:41:42] 2026-01-09 14:40:43,573 | INFO     | . log creation = 0 s
[2026-01-09 09:41:42] 2026-01-09 14:40:43,573 | INFO     | ..............................
[2026-01-09 09:41:42] 2026-01-09 14:40:43,734 | INFO     | 
[2026-01-09 09:41:42] 2026-01-09 14:40:43,734 | INFO     | job summary report
[2026-01-09 09:41:42] 2026-01-09 14:40:43,734 | INFO     | --------------------------------------------------
[2026-01-09 09:41:42] 2026-01-09 14:40:43,735 | INFO     | PanDA job id: 6963188292
[2026-01-09 09:41:42] 2026-01-09 14:40:43,735 | INFO     | task id: 47898826
[2026-01-09 09:41:42] 2026-01-09 14:40:43,735 | INFO     | errors: (none)
[2026-01-09 09:41:42] 2026-01-09 14:40:43,735 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 09:41:42] 2026-01-09 14:40:43,735 | INFO     | pilot state: finished 
[2026-01-09 09:41:42] 2026-01-09 14:40:43,735 | INFO     | transexitcode: 0
[2026-01-09 09:41:42] 2026-01-09 14:40:43,736 | INFO     | exeerrorcode: 0
[2026-01-09 09:41:42] 2026-01-09 14:40:43,736 | INFO     | exeerrordiag: 
[2026-01-09 09:41:42] 2026-01-09 14:40:43,736 | INFO     | exitcode: 0
[2026-01-09 09:41:42] 2026-01-09 14:40:43,736 | INFO     | exitmsg: OK
[2026-01-09 09:41:42] 2026-01-09 14:40:43,736 | INFO     | cpuconsumptiontime: 119951 s
[2026-01-09 09:41:42] 2026-01-09 14:40:43,736 | INFO     | nevents: 400
[2026-01-09 09:41:42] 2026-01-09 14:40:43,737 | INFO     | neventsw: 0
[2026-01-09 09:41:42] 2026-01-09 14:40:43,737 | INFO     | pid: 7519
[2026-01-09 09:41:42] 2026-01-09 14:40:43,737 | INFO     | pgrp: 7519
[2026-01-09 09:41:42] 2026-01-09 14:40:43,737 | INFO     | corecount: 8
[2026-01-09 09:41:42] 2026-01-09 14:40:43,737 | INFO     | event service: False
[2026-01-09 09:41:42] 2026-01-09 14:40:43,737 | INFO     | sizes: {0: 2283971, 1: 2283971, 4: 2284261, 12: 2284289, 15725: 2315413, 15728: 2324439, 15732: 2324623, 15738: 2324817}
[2026-01-09 09:41:42] 2026-01-09 14:40:43,738 | INFO     | --------------------------------------------------
[2026-01-09 09:41:42] 2026-01-09 14:40:43,738 | INFO     | 
[2026-01-09 09:41:42] 2026-01-09 14:40:43,738 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 09:41:42] 2026-01-09 14:40:43,757 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 09:41:42] 2026-01-09 14:40:43,757 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 09:41:42] 2026-01-09 14:40:43,757 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 09:41:42] 2026-01-09 14:40:43,758 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 09:41:42] 2026-01-09 14:40:43,758 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 09:41:42] 2026-01-09 14:40:43,758 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 09:41:42] 2026-01-09 14:40:43,758 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 09:41:42] 2026-01-09 14:40:43,758 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 09:41:42] 2026-01-09 14:40:43,759 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 09:41:42] 2026-01-09 14:40:43,759 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 09:41:42] 2026-01-09 14:40:43,759 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 09:41:42] 2026-01-09 14:40:43,759 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 09:41:42] 2026-01-09 14:40:43,759 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 09:41:42] 2026-01-09 14:40:43,759 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 09:41:42] 2026-01-09 14:40:43,760 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 09:41:42] 2026-01-09 14:40:43,760 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 09:41:42] 2026-01-09 14:40:43,760 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 09:41:42] 2026-01-09 14:40:43,760 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 09:41:42] 2026-01-09 14:40:43,760 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 09:41:42] 2026-01-09 14:40:43,761 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 09:41:42] 2026-01-09 14:40:43,761 | INFO     | job 6963188292 has completed (purged errors)
[2026-01-09 09:41:42] 2026-01-09 14:40:43,761 | INFO     | overall cleanup function is called
[2026-01-09 09:41:42] 2026-01-09 14:40:44,768 | INFO     | --- collectZombieJob: --- 10, [7519]
[2026-01-09 09:41:42] 2026-01-09 14:40:44,769 | INFO     | zombie collector waiting for pid 7519
[2026-01-09 09:41:42] 2026-01-09 14:40:44,769 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 09:41:42] 2026-01-09 14:40:44,769 | INFO     | collected zombie processes
[2026-01-09 09:41:42] 2026-01-09 14:40:44,769 | INFO     | will attempt to kill all subprocesses of pid=7519
[2026-01-09 09:41:42] 2026-01-09 14:40:44,923 | INFO     | process IDs to be killed: [7519] (in reverse order)
[2026-01-09 09:41:42] 2026-01-09 14:40:44,970 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 09:41:42] 2026-01-09 14:40:44,971 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 09:41:42] 2026-01-09 14:40:44,973 | INFO     | did not find any defunct processes belonging to 7519
[2026-01-09 09:41:42] 2026-01-09 14:40:44,976 | INFO     | did not find any defunct processes belonging to 7519
[2026-01-09 09:41:42] 2026-01-09 14:40:44,976 | INFO     | ready for new job
[2026-01-09 09:41:42] 2026-01-09 14:40:44,976 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 09:41:42] 2026-01-09 14:40:44,978 | INFO     | ***************************************
[2026-01-09 09:41:42] 2026-01-09 14:40:44,978 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 09:41:42] 2026-01-09 14:40:44,978 | INFO     | ***************************************
[2026-01-09 09:41:42] 2026-01-09 14:40:44,978 | INFO     | 
[2026-01-09 09:41:42] 2026-01-09 14:40:44,979 | INFO     | architecture information:
[2026-01-09 09:41:42] 2026-01-09 14:40:44,979 | INFO     | executing command: cat /etc/os-release
[2026-01-09 09:41:42] 2026-01-09 14:40:44,992 | INFO     | cat /etc/os-release:
[2026-01-09 09:41:42] NAME="CentOS Linux"
[2026-01-09 09:41:42] VERSION="7 (Core)"
[2026-01-09 09:41:42] ID="centos"
[2026-01-09 09:41:42] ID_LIKE="rhel fedora"
[2026-01-09 09:41:42] VERSION_ID="7"
[2026-01-09 09:41:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 09:41:42] ANSI_COLOR="0;31"
[2026-01-09 09:41:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 09:41:42] HOME_URL="https://www.centos.org/"
[2026-01-09 09:41:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 09:41:42] 
[2026-01-09 09:41:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 09:41:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 09:41:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 09:41:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 09:41:42] 
[2026-01-09 09:41:42] 2026-01-09 14:40:44,992 | INFO     | ***************************************
[2026-01-09 09:41:42] 2026-01-09 14:40:45,495 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 09:41:42] 2026-01-09 14:40:45,530 | INFO     | sufficient remaining disk space (27877441536 B)
[2026-01-09 09:41:42] 2026-01-09 14:40:45,530 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 09:41:42] 2026-01-09 14:40:45,531 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 09:41:42] 2026-01-09 14:40:45,531 | INFO     | update_server=False
[2026-01-09 09:41:42] 2026-01-09 14:40:45,531 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 09:41:42] 2026-01-09 14:40:45,531 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 09:41:42] 2026-01-09 14:40:45,532 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 09:41:42] 2026-01-09 14:40:45,912 | INFO     | all data control threads have been joined
[2026-01-09 09:41:42] 2026-01-09 14:40:45,950 | INFO     | all job control threads have been joined
[2026-01-09 09:41:42] 2026-01-09 14:40:46,061 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 09:41:42] 2026-01-09 14:40:46,061 | INFO     | aborting loop
[2026-01-09 09:41:42] 2026-01-09 14:40:46,295 | INFO     | all payload control threads have been joined
[2026-01-09 09:41:42] 2026-01-09 14:40:46,532 | INFO     | [job] retrieve thread has finished
[2026-01-09 09:41:42] 2026-01-09 14:40:46,537 | INFO     | [job] queue monitor thread has finished
[2026-01-09 09:41:42] 2026-01-09 14:40:46,818 | INFO     | [payload] validate_post thread has finished
[2026-01-09 09:41:42] 2026-01-09 14:40:46,917 | INFO     | [data] control thread has finished
[2026-01-09 09:41:42] 2026-01-09 14:40:46,957 | INFO     | [job] control thread has finished
[2026-01-09 09:41:42] 2026-01-09 14:40:47,048 | INFO     | [payload] failed_post thread has finished
[2026-01-09 09:41:42] 2026-01-09 14:40:47,066 | INFO     | [job] job monitor thread has finished
[2026-01-09 09:41:42] 2026-01-09 14:40:47,253 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 09:41:42] 2026-01-09 14:40:47,301 | INFO     | [payload] control thread has finished
[2026-01-09 09:41:42] 2026-01-09 14:40:47,325 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 09:41:42] 2026-01-09 14:40:47,538 | INFO     | [data] copytool_out thread has finished
[2026-01-09 09:41:42] 2026-01-09 14:40:47,586 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 09:41:42] 2026-01-09 14:40:47,630 | INFO     | [data] copytool_in thread has finished
[2026-01-09 09:41:42] 2026-01-09 14:40:47,630 | INFO     | [job] validate thread has finished
[2026-01-09 09:41:42] 2026-01-09 14:40:47,630 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 09:41:42] 2026-01-09 14:40:48,140 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 09:41:42] 2026-01-09 14:40:52,145 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 09:41:42] 2026-01-09 14:41:15,174 | INFO     | PID=850 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2026-01-09 09:41:42] 2026-01-09 14:41:15,174 | INFO     | .. there are 3 such processes running
[2026-01-09 09:41:42] 2026-01-09 14:41:15,175 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 09:41:42] 2026-01-09 14:41:15,175 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 09:41:42] 2026-01-09 14:41:15,175 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 09:41:42] 2026-01-09 14:41:35,190 | INFO     | [monitor] cgroup control has ended
[2026-01-09 09:41:42] 2026-01-09 14:41:36,671 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139858992150336)>', '<ExcThread(monitor, started 139858412558080)>']
[2026-01-09 09:41:42] 2026-01-09 14:41:37,277 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 09:41:42] 2026-01-09 14:41:37,277 | INFO     | [monitor] control thread has ended
[2026-01-09 09:41:42] 2026-01-09 14:41:41,697 | INFO     | all workflow threads have been joined
[2026-01-09 09:41:42] 2026-01-09 14:41:41,697 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 09:41:42] 2026-01-09 14:41:41,697 | INFO     | traces error code: 0
[2026-01-09 09:41:42] 2026-01-09 14:41:41,698 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 09:41:42] 2026-01-09 14:41:41,835 [wrapper] ==== pilot stdout END ====
[2026-01-09 09:41:42] 2026-01-09 14:41:41,838 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 09:41:42] 2026-01-09 14:41:41,840 [wrapper] pilotpid: 850
[2026-01-09 09:41:42] 2026-01-09 14:41:41,842 [wrapper] Pilot exit status: 0
[2026-01-09 09:41:42] 2026-01-09 14:41:41,851 [wrapper] pandaids: 6963188292
[2026-01-09 09:41:42] 2026-01-09 14:41:41,881 [wrapper] cleanup supervisor_pilot 29009 851
[2026-01-09 09:41:42] 2026-01-09 14:41:41,884 [wrapper] Test setup, not cleaning
[2026-01-09 09:41:42] 2026-01-09 14:41:41,886 [wrapper] apfmon messages muted
[2026-01-09 09:41:42] 2026-01-09 14:41:41,888 [wrapper] ==== wrapper stdout END ====
[2026-01-09 09:41:42] 2026-01-09 14:41:41,890 [wrapper] ==== wrapper stderr END ====
[2026-01-09 09:41:42]  *** Error codes and diagnostics ***
[2026-01-09 09:41:42]     "exeErrorCode": 0,
[2026-01-09 09:41:42]     "exeErrorDiag": "",
[2026-01-09 09:41:42]     "pilotErrorCode": 0,
[2026-01-09 09:41:42]     "pilotErrorDiag": "",
[2026-01-09 09:41:42]  *** Listing of results directory ***
[2026-01-09 09:41:42] total 437500
[2026-01-09 09:41:42] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 23:21 queuedata.json
[2026-01-09 09:41:42] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-09 09:41:42] -rwx------ 1 boincer umatlas     36322 Jan  8 23:22 runpilot2-wrapper.sh
[2026-01-09 09:41:42] -rw-r--r-- 1 boincer umatlas       100 Jan  9 05:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 09:41:42] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 05:17 run_atlas
[2026-01-09 09:41:42] -rw-r--r-- 1 boincer umatlas       105 Jan  9 05:17 job.xml
[2026-01-09 09:41:42] -rw-r--r-- 2 boincer umatlas 223375160 Jan  9 05:17 EVNT.47898824._001436.pool.root.1
[2026-01-09 09:41:42] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 05:17 start_atlas.sh
[2026-01-09 09:41:42] drwxrwx--x 2 boincer umatlas      4096 Jan  9 05:17 shared
[2026-01-09 09:41:42] -rw-r--r-- 2 boincer umatlas    592396 Jan  9 05:17 input.tar.gz
[2026-01-09 09:41:42] -rw-r--r-- 1 boincer umatlas         0 Jan  9 05:17 boinc_lockfile
[2026-01-09 09:41:42] -rw-r--r-- 1 boincer umatlas      2520 Jan  9 05:17 pandaJob.out
[2026-01-09 09:41:42] -rw------- 1 boincer umatlas        57 Jan  9 05:17 setup.sh.local
[2026-01-09 09:41:42] -rw------- 1 boincer umatlas    989369 Jan  9 05:18 agis_schedconf.cvmfs.json
[2026-01-09 09:41:42] drwx------ 5 boincer umatlas      4096 Jan  9 05:18 pilot3
[2026-01-09 09:41:42] -rw-r--r-- 1 boincer umatlas      5953 Jan  9 09:37 init_data.xml
[2026-01-09 09:41:42] -rw------- 1 boincer umatlas 215344774 Jan  9 09:39 HITS.47898826._037444.pool.root.1
[2026-01-09 09:41:42] -rw-r--r-- 1 boincer umatlas       531 Jan  9 09:40 boinc_task_state.xml
[2026-01-09 09:41:42] -rw------- 1 boincer umatlas      1055 Jan  9 09:40 memory_monitor_summary.json
[2026-01-09 09:41:42] -rw------- 1 boincer umatlas   1516240 Jan  9 09:40 agis_ddmendpoints.agis.ALL.json
[2026-01-09 09:41:42] -rw------- 1 boincer umatlas    494213 Jan  9 09:40 log.47898826._037444.job.log.tgz.1
[2026-01-09 09:41:42] -rw------- 1 boincer umatlas        95 Jan  9 09:40 pilot_heartbeat.json
[2026-01-09 09:41:42] -rw------- 1 boincer umatlas      7862 Jan  9 09:40 heartbeat.json
[2026-01-09 09:41:42] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 09:41 boinc_mmap_file
[2026-01-09 09:41:42] -rw-r--r-- 1 boincer umatlas        29 Jan  9 09:41 wrapper_checkpoint.txt
[2026-01-09 09:41:42] -rw------- 1 boincer umatlas      4819 Jan  9 09:41 pilotlog.txt
[2026-01-09 09:41:42] -rw------- 1 boincer umatlas   2185926 Jan  9 09:41 log.47898826._037444.job.log.1
[2026-01-09 09:41:42] -rw------- 1 boincer umatlas       357 Jan  9 09:41 output.list
[2026-01-09 09:41:42] -rw-r--r-- 1 boincer umatlas       620 Jan  9 09:41 runtime_log
[2026-01-09 09:41:42] -rw------- 1 boincer umatlas   2703360 Jan  9 09:41 result.tar.gz
[2026-01-09 09:41:42] -rw-r--r-- 1 boincer umatlas      9343 Jan  9 09:41 runtime_log.err
[2026-01-09 09:41:42] -rw------- 1 boincer umatlas       663 Jan  9 09:41 1nKLDmoBJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm55lKDmjLrbkn.diag
[2026-01-09 09:41:42] -rw-r--r-- 1 boincer umatlas     21407 Jan  9 09:41 stderr.txt
[2026-01-09 09:41:42] HITS file was successfully produced:
[2026-01-09 09:41:42] -rw------- 1 boincer umatlas 215344774 Jan  9 09:39 shared/HITS.pool.root.1
[2026-01-09 09:41:42]  *** Contents of shared directory: ***
[2026-01-09 09:41:42] total 431684
[2026-01-09 09:41:42] -rw-r--r-- 2 boincer umatlas 223375160 Jan  9 05:17 ATLAS.root_0
[2026-01-09 09:41:42] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 05:17 start_atlas.sh
[2026-01-09 09:41:42] -rw-r--r-- 2 boincer umatlas    592396 Jan  9 05:17 input.tar.gz
[2026-01-09 09:41:42] -rw------- 1 boincer umatlas 215344774 Jan  9 09:39 HITS.pool.root.1
[2026-01-09 09:41:42] -rw------- 1 boincer umatlas   2703360 Jan  9 09:41 result.tar.gz
09:41:43 (29573): run_atlas exited; CPU time 120158.694800
09:41:43 (29573): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN