Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:04:57 (17378): wrapper (7.7.26015): starting
16:04:57 (17378): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 16:04:57] Arguments: --nthreads 12
[2026-01-09 16:04:57] Threads: 12
[2026-01-09 16:04:57] Checking for CVMFS
[2026-01-09 16:04:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 16:04:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 16:04:57] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 16:04:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 16:04:57] 2.13.3.0 3084131 2094 78536 154946 0 188 3912581 4097025 923 130560 0 2769534 99.993 78310 23446 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2026-01-09 16:04:57] CVMFS is ok
[2026-01-09 16:04:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 16:04:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 16:04:57] Further information can be found at the LHC@home message board.
[2026-01-09 16:04:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 16:04:57] Checking for apptainer binary...
[2026-01-09 16:04:57] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2026-01-09 16:04:57] apptainer is not installed, using version from CVMFS
[2026-01-09 16:04:57] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 16:04:58] pckelar3.cern.ch
[2026-01-09 16:04:58] apptainer works
[2026-01-09 16:04:58] Set ATHENA_PROC_NUMBER=12
[2026-01-09 16:04:58] Set ATHENA_CORE_NUMBER=12
[2026-01-09 16:04:58] Starting ATLAS job with PandaID=6963188584
[2026-01-09 16:04:58] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 18:47:29]  *** The last 200 lines of the pilot log: ***
[2026-01-09 18:47:29] 2026-01-09 17:46:39,952 | INFO     | monitor loop #694: job 0:6963188584 is in state 'finished'
[2026-01-09 18:47:29] 2026-01-09 17:46:39,952 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 18:47:29] 2026-01-09 17:46:40,805 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 18:47:29] 2026-01-09 17:46:40,808 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2816.974125
[2026-01-09 18:47:29] 2026-01-09 17:46:40,811 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6963188584/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 18:47:29] 2026-01-09 17:46:40,812 | INFO     | extracted standard info from prmon json
[2026-01-09 18:47:29] 2026-01-09 17:46:40,812 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 18:47:29] 2026-01-09 17:46:40,812 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 18:47:29] 2026-01-09 17:46:40,812 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 18:47:29] 2026-01-09 17:46:40,812 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 18:47:29] 2026-01-09 17:46:40,815 | INFO     | fitting pss+swap vs Time
[2026-01-09 18:47:29] 2026-01-09 17:46:40,815 | INFO     | sum of square deviations: 1246386160.0
[2026-01-09 18:47:29] 2026-01-09 17:46:40,816 | INFO     | sum of deviations: 14324989167.99997
[2026-01-09 18:47:29] 2026-01-09 17:46:40,816 | INFO     | mean x: 1767975958.0
[2026-01-09 18:47:29] 2026-01-09 17:46:40,816 | INFO     | mean y: 2679176.1006289306
[2026-01-09 18:47:29] 2026-01-09 17:46:40,816 | INFO     | intersect: -20317055798.84034
[2026-01-09 18:47:29] 2026-01-09 17:46:40,816 | INFO     | chi2: 2.0791469339055966
[2026-01-09 18:47:29] 2026-01-09 17:46:40,816 | INFO     | sum of square deviations: 1132458442.5
[2026-01-09 18:47:29] 2026-01-09 17:46:40,817 | INFO     | sum of deviations: 24280111698.00001
[2026-01-09 18:47:29] 2026-01-09 17:46:40,817 | INFO     | mean x: 1767975805.5
[2026-01-09 18:47:29] 2026-01-09 17:46:40,817 | INFO     | mean y: 2692129.662337662
[2026-01-09 18:47:29] 2026-01-09 17:46:40,817 | INFO     | intersect: -37903025577.856575
[2026-01-09 18:47:29] 2026-01-09 17:46:40,818 | INFO     | chi2: 1.3840090926660389
[2026-01-09 18:47:29] 2026-01-09 17:46:40,818 | INFO     | current chi2=1.3840090926660389 (change=33.433800656587955 %)
[2026-01-09 18:47:29] 2026-01-09 17:46:40,818 | INFO     | sum of square deviations: 1025693650.0
[2026-01-09 18:47:29] 2026-01-09 17:46:40,819 | INFO     | sum of deviations: 23131853554.000023
[2026-01-09 18:47:29] 2026-01-09 17:46:40,819 | INFO     | mean x: 1767975653.0
[2026-01-09 18:47:29] 2026-01-09 17:46:40,819 | INFO     | mean y: 2690488.966442953
[2026-01-09 18:47:29] 2026-01-09 17:46:40,819 | INFO     | intersect: -39869403768.645035
[2026-01-09 18:47:29] 2026-01-09 17:46:40,819 | INFO     | chi2: 1.3854825622085458
[2026-01-09 18:47:29] 2026-01-09 17:46:40,819 | INFO     | current chi2=1.3854825622085458 (change=-0.10646386286874499 %)
[2026-01-09 18:47:29] 2026-01-09 17:46:40,819 | INFO     | right removable region: 148
[2026-01-09 18:47:29] 2026-01-09 17:46:40,820 | INFO     | sum of square deviations: 1132458442.5
[2026-01-09 18:47:29] 2026-01-09 17:46:40,820 | INFO     | sum of deviations: -8633820165.500002
[2026-01-09 18:47:29] 2026-01-09 17:46:40,820 | INFO     | mean x: 1767976110.5
[2026-01-09 18:47:29] 2026-01-09 17:46:40,820 | INFO     | mean y: 2709412.7337662335
[2026-01-09 18:47:29] 2026-01-09 17:46:40,821 | INFO     | intersect: 13481692148.082273
[2026-01-09 18:47:29] 2026-01-09 17:46:40,821 | INFO     | chi2: 0.8010309457415176
[2026-01-09 18:47:29] 2026-01-09 17:46:40,821 | INFO     | current chi2=0.8010309457415176 (change=61.47309587991398 %)
[2026-01-09 18:47:29] 2026-01-09 17:46:40,821 | INFO     | sum of square deviations: 1025693650.0
[2026-01-09 18:47:29] 2026-01-09 17:46:40,822 | INFO     | sum of deviations: -5413706384.999999
[2026-01-09 18:47:29] 2026-01-09 17:46:40,822 | INFO     | mean x: 1767976263.0
[2026-01-09 18:47:29] 2026-01-09 17:46:40,822 | INFO     | mean y: 2704692.644295302
[2026-01-09 18:47:29] 2026-01-09 17:46:40,822 | INFO     | intersect: 9334247676.781458
[2026-01-09 18:47:29] 2026-01-09 17:46:40,822 | INFO     | chi2: 0.7577397488274215
[2026-01-09 18:47:29] 2026-01-09 17:46:40,822 | INFO     | current chi2=0.7577397488274215 (change=5.40443501518175 %)
[2026-01-09 18:47:29] 2026-01-09 17:46:40,822 | INFO     | left removable region: 20
[2026-01-09 18:47:29] 2026-01-09 17:46:40,823 | INFO     | sum of square deviations: 650252192.0
[2026-01-09 18:47:29] 2026-01-09 17:46:40,823 | INFO     | sum of deviations: 5363124178.5
[2026-01-09 18:47:29] 2026-01-09 17:46:40,823 | INFO     | mean x: 1767976232.5
[2026-01-09 18:47:29] 2026-01-09 17:46:40,823 | INFO     | mean y: 2716195.7109375
[2026-01-09 18:47:29] 2026-01-09 17:46:40,824 | INFO     | intersect: -14579127889.074688
[2026-01-09 18:47:29] 2026-01-09 17:46:40,824 | INFO     | chi2: 0.001037767428035168
[2026-01-09 18:47:29] 2026-01-09 17:46:40,824 | INFO     | current memory leak: 8.25 B/s (using 128 data points, chi2=0.00)
[2026-01-09 18:47:29] 2026-01-09 17:46:40,824 | INFO     | could have reported an average CPU frequency of 2806 MHz (9 samples)
[2026-01-09 18:47:29] 2026-01-09 17:46:40,824 | INFO     | ..............................
[2026-01-09 18:47:29] 2026-01-09 17:46:40,824 | INFO     | . Timing measurements:
[2026-01-09 18:47:29] 2026-01-09 17:46:40,825 | INFO     | . get job = 0 s
[2026-01-09 18:47:29] 2026-01-09 17:46:40,825 | INFO     | . initial setup = 1 s
[2026-01-09 18:47:29] 2026-01-09 17:46:40,825 | INFO     | . payload setup = 8 s
[2026-01-09 18:47:29] 2026-01-09 17:46:40,825 | INFO     | . stage-in = 0 s
[2026-01-09 18:47:29] 2026-01-09 17:46:40,825 | INFO     | . payload execution = 9656 s
[2026-01-09 18:47:29] 2026-01-09 17:46:40,825 | INFO     | . stage-out = 0 s
[2026-01-09 18:47:29] 2026-01-09 17:46:40,825 | INFO     | . log creation = 0 s
[2026-01-09 18:47:29] 2026-01-09 17:46:40,825 | INFO     | ..............................
[2026-01-09 18:47:29] 2026-01-09 17:46:40,895 | INFO     | 
[2026-01-09 18:47:29] 2026-01-09 17:46:40,895 | INFO     | job summary report
[2026-01-09 18:47:29] 2026-01-09 17:46:40,895 | INFO     | --------------------------------------------------
[2026-01-09 18:47:29] 2026-01-09 17:46:40,896 | INFO     | PanDA job id: 6963188584
[2026-01-09 18:47:29] 2026-01-09 17:46:40,896 | INFO     | task id: 47898826
[2026-01-09 18:47:29] 2026-01-09 17:46:40,896 | INFO     | errors: (none)
[2026-01-09 18:47:29] 2026-01-09 17:46:40,896 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 18:47:29] 2026-01-09 17:46:40,896 | INFO     | pilot state: finished 
[2026-01-09 18:47:29] 2026-01-09 17:46:40,896 | INFO     | transexitcode: 0
[2026-01-09 18:47:29] 2026-01-09 17:46:40,896 | INFO     | exeerrorcode: 0
[2026-01-09 18:47:29] 2026-01-09 17:46:40,897 | INFO     | exeerrordiag: 
[2026-01-09 18:47:29] 2026-01-09 17:46:40,897 | INFO     | exitcode: 0
[2026-01-09 18:47:29] 2026-01-09 17:46:40,897 | INFO     | exitmsg: OK
[2026-01-09 18:47:29] 2026-01-09 17:46:40,897 | INFO     | cpuconsumptiontime: 107558 s
[2026-01-09 18:47:29] 2026-01-09 17:46:40,897 | INFO     | nevents: 400
[2026-01-09 18:47:29] 2026-01-09 17:46:40,897 | INFO     | neventsw: 0
[2026-01-09 18:47:29] 2026-01-09 17:46:40,898 | INFO     | pid: 28730
[2026-01-09 18:47:29] 2026-01-09 17:46:40,898 | INFO     | pgrp: 28730
[2026-01-09 18:47:29] 2026-01-09 17:46:40,898 | INFO     | corecount: 12
[2026-01-09 18:47:29] 2026-01-09 17:46:40,898 | INFO     | event service: False
[2026-01-09 18:47:29] 2026-01-09 17:46:40,898 | INFO     | sizes: {0: 2283744, 1: 2283999, 2: 2283999, 5: 2284289, 12: 2284345, 9669: 2312769, 9670: 2321823, 9676: 2322025}
[2026-01-09 18:47:29] 2026-01-09 17:46:40,898 | INFO     | --------------------------------------------------
[2026-01-09 18:47:29] 2026-01-09 17:46:40,898 | INFO     | 
[2026-01-09 18:47:29] 2026-01-09 17:46:40,899 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2026-01-09 18:47:29] 2026-01-09 17:46:40,912 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 18:47:29] 2026-01-09 17:46:40,913 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 18:47:29] 2026-01-09 17:46:40,913 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 18:47:29] 2026-01-09 17:46:40,913 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 18:47:29] 2026-01-09 17:46:40,913 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 18:47:29] 2026-01-09 17:46:40,913 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 18:47:29] 2026-01-09 17:46:40,914 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 18:47:29] 2026-01-09 17:46:40,914 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 18:47:29] 2026-01-09 17:46:40,914 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 18:47:29] 2026-01-09 17:46:40,914 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 18:47:29] 2026-01-09 17:46:40,914 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 18:47:29] 2026-01-09 17:46:40,914 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 18:47:29] 2026-01-09 17:46:40,914 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 18:47:29] 2026-01-09 17:46:40,915 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 18:47:29] 2026-01-09 17:46:40,915 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 18:47:29] 2026-01-09 17:46:40,915 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 18:47:29] 2026-01-09 17:46:40,915 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 18:47:29] 2026-01-09 17:46:40,915 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 18:47:29] 2026-01-09 17:46:40,915 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 18:47:29] 2026-01-09 17:46:40,916 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 18:47:29] 2026-01-09 17:46:40,916 | INFO     | job 6963188584 has completed (purged errors)
[2026-01-09 18:47:29] 2026-01-09 17:46:40,916 | INFO     | overall cleanup function is called
[2026-01-09 18:47:29] 2026-01-09 17:46:41,924 | INFO     | --- collectZombieJob: --- 10, [28730]
[2026-01-09 18:47:29] 2026-01-09 17:46:41,924 | INFO     | zombie collector waiting for pid 28730
[2026-01-09 18:47:29] 2026-01-09 17:46:41,924 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 18:47:29] 2026-01-09 17:46:41,924 | INFO     | collected zombie processes
[2026-01-09 18:47:29] 2026-01-09 17:46:41,924 | INFO     | will attempt to kill all subprocesses of pid=28730
[2026-01-09 18:47:29] 2026-01-09 17:46:42,103 | INFO     | process IDs to be killed: [28730] (in reverse order)
[2026-01-09 18:47:29] 2026-01-09 17:46:42,160 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 18:47:29] 2026-01-09 17:46:42,160 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 18:47:29] 2026-01-09 17:46:42,167 | INFO     | did not find any defunct processes belonging to 28730
[2026-01-09 18:47:29] 2026-01-09 17:46:42,173 | INFO     | did not find any defunct processes belonging to 28730
[2026-01-09 18:47:29] 2026-01-09 17:46:42,173 | INFO     | ready for new job
[2026-01-09 18:47:29] 2026-01-09 17:46:42,173 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 18:47:29] 2026-01-09 17:46:42,175 | INFO     | ***************************************
[2026-01-09 18:47:29] 2026-01-09 17:46:42,175 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 18:47:29] 2026-01-09 17:46:42,175 | INFO     | ***************************************
[2026-01-09 18:47:29] 2026-01-09 17:46:42,176 | INFO     | 
[2026-01-09 18:47:29] 2026-01-09 17:46:42,177 | INFO     | architecture information:
[2026-01-09 18:47:29] 2026-01-09 17:46:42,177 | INFO     | executing command: cat /etc/os-release
[2026-01-09 18:47:29] 2026-01-09 17:46:42,189 | INFO     | cat /etc/os-release:
[2026-01-09 18:47:29] NAME="CentOS Linux"
[2026-01-09 18:47:29] VERSION="7 (Core)"
[2026-01-09 18:47:29] ID="centos"
[2026-01-09 18:47:29] ID_LIKE="rhel fedora"
[2026-01-09 18:47:29] VERSION_ID="7"
[2026-01-09 18:47:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 18:47:29] ANSI_COLOR="0;31"
[2026-01-09 18:47:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 18:47:29] HOME_URL="https://www.centos.org/"
[2026-01-09 18:47:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 18:47:29] 
[2026-01-09 18:47:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 18:47:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 18:47:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 18:47:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 18:47:29] 
[2026-01-09 18:47:29] 2026-01-09 17:46:42,190 | INFO     | ***************************************
[2026-01-09 18:47:29] 2026-01-09 17:46:42,693 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2026-01-09 18:47:29] 2026-01-09 17:46:42,711 | INFO     | sufficient remaining disk space (564055244800 B)
[2026-01-09 18:47:29] 2026-01-09 17:46:42,711 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 18:47:29] 2026-01-09 17:46:42,712 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 18:47:29] 2026-01-09 17:46:42,712 | INFO     | update_server=False
[2026-01-09 18:47:29] 2026-01-09 17:46:42,712 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 18:47:29] 2026-01-09 17:46:42,712 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 18:47:29] 2026-01-09 17:46:42,712 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 18:47:29] 2026-01-09 17:46:43,253 | INFO     | all data control threads have been joined
[2026-01-09 18:47:29] 2026-01-09 17:46:43,460 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 18:47:29] 2026-01-09 17:46:43,460 | INFO     | aborting loop
[2026-01-09 18:47:29] 2026-01-09 17:46:43,696 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 18:47:29] 2026-01-09 17:46:43,717 | INFO     | [job] retrieve thread has finished
[2026-01-09 18:47:29] 2026-01-09 17:46:43,718 | INFO     | [job] queue monitor thread has finished
[2026-01-09 18:47:29] 2026-01-09 17:46:43,743 | INFO     | all payload control threads have been joined
[2026-01-09 18:47:29] 2026-01-09 17:46:43,840 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 18:47:29] 2026-01-09 17:46:43,840 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 18:47:29] 2026-01-09 17:46:44,253 | INFO     | [job] validate thread has finished
[2026-01-09 18:47:29] 2026-01-09 17:46:44,259 | INFO     | [data] control thread has finished
[2026-01-09 18:47:29] 2026-01-09 17:46:44,298 | INFO     | all job control threads have been joined
[2026-01-09 18:47:29] 2026-01-09 17:46:44,446 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 18:47:29] 2026-01-09 17:46:44,466 | INFO     | [job] job monitor thread has finished
[2026-01-09 18:47:29] 2026-01-09 17:46:44,492 | INFO     | [payload] failed_post thread has finished
[2026-01-09 18:47:29] 2026-01-09 17:46:44,635 | INFO     | [data] copytool_in thread has finished
[2026-01-09 18:47:29] 2026-01-09 17:46:44,748 | INFO     | [payload] control thread has finished
[2026-01-09 18:47:29] 2026-01-09 17:46:44,914 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 18:47:29] 2026-01-09 17:46:45,197 | INFO     | [payload] validate_post thread has finished
[2026-01-09 18:47:29] 2026-01-09 17:46:45,304 | INFO     | [job] control thread has finished
[2026-01-09 18:47:29] 2026-01-09 17:46:45,702 | INFO     | [data] copytool_out thread has finished
[2026-01-09 18:47:29] 2026-01-09 17:46:46,718 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 18:47:29] 2026-01-09 17:47:12,650 | INFO     | PID=21236 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 18:47:29] 2026-01-09 17:47:12,650 | INFO     | .. there are 2 such processes running
[2026-01-09 18:47:29] 2026-01-09 17:47:12,650 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 18:47:29] 2026-01-09 17:47:12,650 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 18:47:29] 2026-01-09 17:47:12,651 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 18:47:29] 2026-01-09 17:47:24,094 | INFO     | [monitor] cgroup control has ended
[2026-01-09 18:47:29] 2026-01-09 17:47:24,118 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140306872158016)>', '<ExcThread(monitor, started 140306112575232)>']
[2026-01-09 18:47:29] 2026-01-09 17:47:24,707 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 18:47:29] 2026-01-09 17:47:24,707 | INFO     | [monitor] control thread has ended
[2026-01-09 18:47:29] 2026-01-09 17:47:29,139 | INFO     | all workflow threads have been joined
[2026-01-09 18:47:29] 2026-01-09 17:47:29,140 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 18:47:29] 2026-01-09 17:47:29,140 | INFO     | traces error code: 0
[2026-01-09 18:47:29] 2026-01-09 17:47:29,140 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 18:47:29] 2026-01-09 17:47:29,250 [wrapper] ==== pilot stdout END ====
[2026-01-09 18:47:29] 2026-01-09 17:47:29,253 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 18:47:29] 2026-01-09 17:47:29,256 [wrapper] pilotpid: 21236
[2026-01-09 18:47:29] 2026-01-09 17:47:29,258 [wrapper] Pilot exit status: 0
[2026-01-09 18:47:29] 2026-01-09 17:47:29,268 [wrapper] pandaids: 6963188584
[2026-01-09 18:47:29] 2026-01-09 17:47:29,306 [wrapper] cleanup supervisor_pilot   95257 21237
[2026-01-09 18:47:29] 2026-01-09 17:47:29,309 [wrapper] Test setup, not cleaning
[2026-01-09 18:47:29] 2026-01-09 17:47:29,311 [wrapper] apfmon messages muted
[2026-01-09 18:47:29] 2026-01-09 17:47:29,314 [wrapper] ==== wrapper stdout END ====
[2026-01-09 18:47:29] 2026-01-09 17:47:29,316 [wrapper] ==== wrapper stderr END ====
[2026-01-09 18:47:29]  *** Error codes and diagnostics ***
[2026-01-09 18:47:29]     "exeErrorCode": 0,
[2026-01-09 18:47:29]     "exeErrorDiag": "",
[2026-01-09 18:47:29]     "pilotErrorCode": 0,
[2026-01-09 18:47:29]     "pilotErrorDiag": "",
[2026-01-09 18:47:29]  *** Listing of results directory ***
[2026-01-09 18:47:29] total 443964
[2026-01-09 18:47:29] -rw-r--r-- 1 boinc boinc      5112 Jan  9 05:21 queuedata.json
[2026-01-09 18:47:29] -rw-r--r-- 1 boinc boinc    579449 Jan  9 05:21 pilot3.tar.gz
[2026-01-09 18:47:29] -rwx------ 1 boinc boinc     36322 Jan  9 05:22 runpilot2-wrapper.sh
[2026-01-09 18:47:29] -rw-r--r-- 1 boinc boinc       100 Jan  9 16:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 18:47:29] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 16:04 run_atlas
[2026-01-09 18:47:29] -rw-r--r-- 1 boinc boinc       105 Jan  9 16:04 job.xml
[2026-01-09 18:47:29] -rw-r--r-- 2 boinc boinc 226979283 Jan  9 16:04 EVNT.47898824._001445.pool.root.1
[2026-01-09 18:47:29] -rw-r--r-- 1 boinc boinc      6235 Jan  9 16:04 init_data.xml
[2026-01-09 18:47:29] -rw-r--r-- 2 boinc boinc     15847 Jan  9 16:04 start_atlas.sh
[2026-01-09 18:47:29] drwxrwx--x 2 boinc boinc        68 Jan  9 16:04 shared
[2026-01-09 18:47:29] -rw-r--r-- 2 boinc boinc    592403 Jan  9 16:04 input.tar.gz
[2026-01-09 18:47:29] -rw-r--r-- 1 boinc boinc         0 Jan  9 16:04 boinc_lockfile
[2026-01-09 18:47:29] -rw-r--r-- 1 boinc boinc      2520 Jan  9 16:04 pandaJob.out
[2026-01-09 18:47:29] -rw------- 1 boinc boinc    989377 Jan  9 16:05 agis_schedconf.cvmfs.json
[2026-01-09 18:47:29] -rw------- 1 boinc boinc   1516240 Jan  9 16:05 agis_ddmendpoints.agis.ALL.json
[2026-01-09 18:47:29] drwx------ 5 boinc boinc      4096 Jan  9 16:05 pilot3
[2026-01-09 18:47:29] -rw------- 1 boinc boinc 220092498 Jan  9 18:45 HITS.47898826._037671.pool.root.1
[2026-01-09 18:47:29] -rw------- 1 boinc boinc        95 Jan  9 18:46 pilot_heartbeat.json
[2026-01-09 18:47:29] -rw-r--r-- 1 boinc boinc       530 Jan  9 18:46 boinc_task_state.xml
[2026-01-09 18:47:29] -rw------- 1 boinc boinc      1026 Jan  9 18:46 memory_monitor_summary.json
[2026-01-09 18:47:29] -rw------- 1 boinc boinc    469139 Jan  9 18:46 log.47898826._037671.job.log.tgz.1
[2026-01-09 18:47:29] -rw------- 1 boinc boinc      7801 Jan  9 18:46 heartbeat.json
[2026-01-09 18:47:29] -rw-r--r-- 1 boinc boinc      8192 Jan  9 18:47 boinc_mmap_file
[2026-01-09 18:47:29] -rw-r--r-- 1 boinc boinc        28 Jan  9 18:47 wrapper_checkpoint.txt
[2026-01-09 18:47:29] -rw------- 1 boinc boinc      4822 Jan  9 18:47 pilotlog.txt
[2026-01-09 18:47:29] -rw------- 1 boinc boinc   1359462 Jan  9 18:47 log.47898826._037671.job.log.1
[2026-01-09 18:47:29] -rw------- 1 boinc boinc       357 Jan  9 18:47 output.list
[2026-01-09 18:47:29] -rw-r--r-- 1 boinc boinc       620 Jan  9 18:47 runtime_log
[2026-01-09 18:47:29] -rw------- 1 boinc boinc   1843200 Jan  9 18:47 result.tar.gz
[2026-01-09 18:47:29] -rw-r--r-- 1 boinc boinc      8841 Jan  9 18:47 runtime_log.err
[2026-01-09 18:47:29] -rw------- 1 boinc boinc       660 Jan  9 18:47 N8zMDmoBJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmXsgKDmYrRkhn.diag
[2026-01-09 18:47:29] -rw-r--r-- 1 boinc boinc     21185 Jan  9 18:47 stderr.txt
[2026-01-09 18:47:29] HITS file was successfully produced:
[2026-01-09 18:47:29] -rw------- 1 boinc boinc 220092498 Jan  9 18:45 shared/HITS.pool.root.1
[2026-01-09 18:47:29]  *** Contents of shared directory: ***
[2026-01-09 18:47:29] total 438992
[2026-01-09 18:47:29] -rw-r--r-- 2 boinc boinc 226979283 Jan  9 16:04 ATLAS.root_0
[2026-01-09 18:47:29] -rw-r--r-- 2 boinc boinc     15847 Jan  9 16:04 start_atlas.sh
[2026-01-09 18:47:29] -rw-r--r-- 2 boinc boinc    592403 Jan  9 16:04 input.tar.gz
[2026-01-09 18:47:29] -rw------- 1 boinc boinc 220092498 Jan  9 18:45 HITS.pool.root.1
[2026-01-09 18:47:29] -rw------- 1 boinc boinc   1843200 Jan  9 18:47 result.tar.gz
18:47:30 (17378): run_atlas exited; CPU time 107742.912072
18:47:30 (17378): called boinc_finish(0)

</stderr_txt>
]]>

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