Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:04:05 (26070): wrapper (7.7.26015): starting
05:04:05 (26070): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 05:04:05] Arguments: --nthreads 8
[2026-01-09 05:04:05] Threads: 8
[2026-01-09 05:04:05] Checking for CVMFS
[2026-01-09 05:04:05] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 05:04:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 05:04:05] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 05:04:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 05:04:06] 2.11.2.0 14221 180883 135860 154938 3 188 10185544 18432001 1833 130560 0 121773691 99.980 6952483 32151 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 05:04:06] CVMFS is ok
[2026-01-09 05:04:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 05:04:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 05:04:06] Further information can be found at the LHC@home message board.
[2026-01-09 05:04:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 05:04:06] Checking for apptainer binary...
[2026-01-09 05:04:06] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 05:04:06] Running /usr/bin/apptainer --version
[2026-01-09 05:04:06] apptainer version 1.3.2-1.el7
[2026-01-09 05:04:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 05:04:06] c-206-9.aglt2.org
[2026-01-09 05:04:06] apptainer works
[2026-01-09 05:04:06] Set ATHENA_PROC_NUMBER=8
[2026-01-09 05:04:06] Set ATHENA_CORE_NUMBER=8
[2026-01-09 05:04:06] Starting ATLAS job with PandaID=6963188263
[2026-01-09 05:04:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 09:24:49]  *** The last 200 lines of the pilot log: ***
[2026-01-09 09:24:49] 2026-01-09 14:23:52,689 | INFO     | intersect: -19292647030.717422
[2026-01-09 09:24:49] 2026-01-09 14:23:52,689 | INFO     | chi2: 1.3935648978187596
[2026-01-09 09:24:49] 2026-01-09 14:23:52,689 | INFO     | sum of square deviations: 4844974562.5
[2026-01-09 09:24:49] 2026-01-09 14:23:52,691 | INFO     | sum of deviations: 54596811883.0
[2026-01-09 09:24:49] 2026-01-09 14:23:52,691 | INFO     | mean x: 1767960677.5
[2026-01-09 09:24:49] 2026-01-09 14:23:52,691 | INFO     | mean y: 2471505.296
[2026-01-09 09:24:49] 2026-01-09 14:23:52,691 | INFO     | intersect: -19920237124.20028
[2026-01-09 09:24:49] 2026-01-09 14:23:52,691 | INFO     | chi2: 1.3937271918850247
[2026-01-09 09:24:49] 2026-01-09 14:23:52,692 | INFO     | current chi2=1.3937271918850247 (change=-0.011645963996304604 %)
[2026-01-09 09:24:49] 2026-01-09 14:23:52,692 | INFO     | right removable region: 249
[2026-01-09 09:24:49] 2026-01-09 14:23:52,692 | INFO     | sum of square deviations: 4844974562.5
[2026-01-09 09:24:49] 2026-01-09 14:23:52,693 | INFO     | sum of deviations: 17105818097.5
[2026-01-09 09:24:49] 2026-01-09 14:23:52,694 | INFO     | mean x: 1767960982.5
[2026-01-09 09:24:49] 2026-01-09 14:23:52,694 | INFO     | mean y: 2492179.604
[2026-01-09 09:24:49] 2026-01-09 14:23:52,694 | INFO     | intersect: -6239525932.152058
[2026-01-09 09:24:49] 2026-01-09 14:23:52,694 | INFO     | chi2: 0.02621082129604428
[2026-01-09 09:24:49] 2026-01-09 14:23:52,694 | INFO     | current chi2=0.02621082129604428 (change=98.11915316343931 %)
[2026-01-09 09:24:49] 2026-01-09 14:23:52,695 | INFO     | sum of square deviations: 4560048290.0
[2026-01-09 09:24:49] 2026-01-09 14:23:52,696 | INFO     | sum of deviations: 12418173942.0
[2026-01-09 09:24:49] 2026-01-09 14:23:52,696 | INFO     | mean x: 1767961135.0
[2026-01-09 09:24:49] 2026-01-09 14:23:52,696 | INFO     | mean y: 2494661.5755102043
[2026-01-09 09:24:49] 2026-01-09 14:23:52,697 | INFO     | intersect: -4812114197.99991
[2026-01-09 09:24:49] 2026-01-09 14:23:52,697 | INFO     | chi2: 0.003330162882072762
[2026-01-09 09:24:49] 2026-01-09 14:23:52,697 | INFO     | current chi2=0.003330162882072762 (change=87.2947022740743 %)
[2026-01-09 09:24:49] 2026-01-09 14:23:52,697 | INFO     | sum of square deviations: 4286517580.0
[2026-01-09 09:24:49] 2026-01-09 14:23:52,699 | INFO     | sum of deviations: 11072735219.500002
[2026-01-09 09:24:49] 2026-01-09 14:23:52,699 | INFO     | mean x: 1767961287.5
[2026-01-09 09:24:49] 2026-01-09 14:23:52,699 | INFO     | mean y: 2495419.220833333
[2026-01-09 09:24:49] 2026-01-09 14:23:52,699 | INFO     | intersect: -4564420929.414279
[2026-01-09 09:24:49] 2026-01-09 14:23:52,699 | INFO     | chi2: 0.0008827341231905363
[2026-01-09 09:24:49] 2026-01-09 14:23:52,700 | INFO     | current chi2=0.0008827341231905363 (change=73.49276433466508 %)
[2026-01-09 09:24:49] 2026-01-09 14:23:52,700 | INFO     | sum of square deviations: 4024149870.0
[2026-01-09 09:24:49] 2026-01-09 14:23:52,701 | INFO     | sum of deviations: 9585178758.0
[2026-01-09 09:24:49] 2026-01-09 14:23:52,701 | INFO     | mean x: 1767961440.0
[2026-01-09 09:24:49] 2026-01-09 14:23:52,701 | INFO     | mean y: 2496282.4765957445
[2026-01-09 09:24:49] 2026-01-09 14:23:52,702 | INFO     | intersect: -4208635754.623974
[2026-01-09 09:24:49] 2026-01-09 14:23:52,702 | INFO     | chi2: 0.00041975367523312736
[2026-01-09 09:24:49] 2026-01-09 14:23:52,702 | INFO     | current chi2=0.00041975367523312736 (change=52.44845937121154 %)
[2026-01-09 09:24:49] 2026-01-09 14:23:52,702 | INFO     | sum of square deviations: 3772712597.5
[2026-01-09 09:24:49] 2026-01-09 14:23:52,704 | INFO     | sum of deviations: 8646339134.5
[2026-01-09 09:24:49] 2026-01-09 14:23:52,704 | INFO     | mean x: 1767961592.5
[2026-01-09 09:24:49] 2026-01-09 14:23:52,704 | INFO     | mean y: 2496851.6478260867
[2026-01-09 09:24:49] 2026-01-09 14:23:52,704 | INFO     | intersect: -4049334585.4076414
[2026-01-09 09:24:49] 2026-01-09 14:23:52,704 | INFO     | chi2: 0.00033911748130361486
[2026-01-09 09:24:49] 2026-01-09 14:23:52,704 | INFO     | current chi2=0.00033911748130361486 (change=19.21036042977537 %)
[2026-01-09 09:24:49] 2026-01-09 14:23:52,704 | INFO     | left removable region: 50
[2026-01-09 09:24:49] 2026-01-09 14:23:52,705 | INFO     | sum of square deviations: 2443580700.0
[2026-01-09 09:24:49] 2026-01-09 14:23:52,706 | INFO     | sum of deviations: 5003690127.000002
[2026-01-09 09:24:49] 2026-01-09 14:23:52,706 | INFO     | mean x: 1767962172.0
[2026-01-09 09:24:49] 2026-01-09 14:23:52,706 | INFO     | mean y: 2498672.4773869347
[2026-01-09 09:24:49] 2026-01-09 14:23:52,706 | INFO     | intersect: -3617735709.3647513
[2026-01-09 09:24:49] 2026-01-09 14:23:52,706 | INFO     | chi2: 0.0002153867616875199
[2026-01-09 09:24:49] 2026-01-09 14:23:52,707 | INFO     | current memory leak: 2.05 B/s (using 199 data points, chi2=0.00)
[2026-01-09 09:24:49] 2026-01-09 14:23:52,707 | INFO     | could have reported an average CPU frequency of 2537 MHz (12 samples)
[2026-01-09 09:24:49] 2026-01-09 14:23:52,707 | INFO     | ..............................
[2026-01-09 09:24:49] 2026-01-09 14:23:52,707 | INFO     | . Timing measurements:
[2026-01-09 09:24:49] 2026-01-09 14:23:52,707 | INFO     | . get job = 0 s
[2026-01-09 09:24:49] 2026-01-09 14:23:52,707 | INFO     | . initial setup = 2 s
[2026-01-09 09:24:49] 2026-01-09 14:23:52,707 | INFO     | . payload setup = 5 s
[2026-01-09 09:24:49] 2026-01-09 14:23:52,707 | INFO     | . stage-in = 0 s
[2026-01-09 09:24:49] 2026-01-09 14:23:52,708 | INFO     | . payload execution = 15541 s
[2026-01-09 09:24:49] 2026-01-09 14:23:52,708 | INFO     | . stage-out = 1 s
[2026-01-09 09:24:49] 2026-01-09 14:23:52,708 | INFO     | . log creation = 0 s
[2026-01-09 09:24:49] 2026-01-09 14:23:52,708 | INFO     | ..............................
[2026-01-09 09:24:49] 2026-01-09 14:23:52,782 | INFO     | 
[2026-01-09 09:24:49] 2026-01-09 14:23:52,782 | INFO     | job summary report
[2026-01-09 09:24:49] 2026-01-09 14:23:52,782 | INFO     | --------------------------------------------------
[2026-01-09 09:24:49] 2026-01-09 14:23:52,782 | INFO     | PanDA job id: 6963188263
[2026-01-09 09:24:49] 2026-01-09 14:23:52,782 | INFO     | task id: 47898826
[2026-01-09 09:24:49] 2026-01-09 14:23:52,782 | INFO     | errors: (none)
[2026-01-09 09:24:49] 2026-01-09 14:23:52,782 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 09:24:49] 2026-01-09 14:23:52,783 | INFO     | pilot state: finished 
[2026-01-09 09:24:49] 2026-01-09 14:23:52,783 | INFO     | transexitcode: 0
[2026-01-09 09:24:49] 2026-01-09 14:23:52,783 | INFO     | exeerrorcode: 0
[2026-01-09 09:24:49] 2026-01-09 14:23:52,783 | INFO     | exeerrordiag: 
[2026-01-09 09:24:49] 2026-01-09 14:23:52,783 | INFO     | exitcode: 0
[2026-01-09 09:24:49] 2026-01-09 14:23:52,783 | INFO     | exitmsg: OK
[2026-01-09 09:24:49] 2026-01-09 14:23:52,783 | INFO     | cpuconsumptiontime: 119350 s
[2026-01-09 09:24:49] 2026-01-09 14:23:52,783 | INFO     | nevents: 400
[2026-01-09 09:24:49] 2026-01-09 14:23:52,783 | INFO     | neventsw: 0
[2026-01-09 09:24:49] 2026-01-09 14:23:52,783 | INFO     | pid: 3943
[2026-01-09 09:24:49] 2026-01-09 14:23:52,784 | INFO     | pgrp: 3943
[2026-01-09 09:24:49] 2026-01-09 14:23:52,784 | INFO     | corecount: 8
[2026-01-09 09:24:49] 2026-01-09 14:23:52,784 | INFO     | event service: False
[2026-01-09 09:24:49] 2026-01-09 14:23:52,784 | INFO     | sizes: {0: 2283971, 1: 2283971, 4: 2284261, 12: 2284289, 15550: 2315472, 15553: 2324654, 15559: 2324792}
[2026-01-09 09:24:49] 2026-01-09 14:23:52,784 | INFO     | --------------------------------------------------
[2026-01-09 09:24:49] 2026-01-09 14:23:52,784 | INFO     | 
[2026-01-09 09:24:49] 2026-01-09 14:23:52,784 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-09 09:24:49] 2026-01-09 14:23:52,803 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 09:24:49] 2026-01-09 14:23:52,803 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 09:24:49] 2026-01-09 14:23:52,803 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 09:24:49] 2026-01-09 14:23:52,803 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 09:24:49] 2026-01-09 14:23:52,803 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 09:24:49] 2026-01-09 14:23:52,803 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 09:24:49] 2026-01-09 14:23:52,804 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 09:24:49] 2026-01-09 14:23:52,804 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 09:24:49] 2026-01-09 14:23:52,804 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 09:24:49] 2026-01-09 14:23:52,804 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 09:24:49] 2026-01-09 14:23:52,804 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 09:24:49] 2026-01-09 14:23:52,804 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 09:24:49] 2026-01-09 14:23:52,804 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 09:24:49] 2026-01-09 14:23:52,804 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 09:24:49] 2026-01-09 14:23:52,804 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 09:24:49] 2026-01-09 14:23:52,805 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 09:24:49] 2026-01-09 14:23:52,805 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 09:24:49] 2026-01-09 14:23:52,805 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 09:24:49] 2026-01-09 14:23:52,805 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 09:24:49] 2026-01-09 14:23:52,805 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 09:24:49] 2026-01-09 14:23:52,805 | INFO     | job 6963188263 has completed (purged errors)
[2026-01-09 09:24:49] 2026-01-09 14:23:52,805 | INFO     | overall cleanup function is called
[2026-01-09 09:24:49] 2026-01-09 14:23:53,812 | INFO     | --- collectZombieJob: --- 10, [3943]
[2026-01-09 09:24:49] 2026-01-09 14:23:53,812 | INFO     | zombie collector waiting for pid 3943
[2026-01-09 09:24:49] 2026-01-09 14:23:53,812 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 09:24:49] 2026-01-09 14:23:53,812 | INFO     | collected zombie processes
[2026-01-09 09:24:49] 2026-01-09 14:23:53,812 | INFO     | will attempt to kill all subprocesses of pid=3943
[2026-01-09 09:24:49] 2026-01-09 14:23:53,910 | INFO     | process IDs to be killed: [3943] (in reverse order)
[2026-01-09 09:24:49] 2026-01-09 14:23:53,953 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 09:24:49] 2026-01-09 14:23:53,953 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 09:24:49] 2026-01-09 14:23:53,956 | INFO     | did not find any defunct processes belonging to 3943
[2026-01-09 09:24:49] 2026-01-09 14:23:53,958 | INFO     | did not find any defunct processes belonging to 3943
[2026-01-09 09:24:49] 2026-01-09 14:23:53,958 | INFO     | ready for new job
[2026-01-09 09:24:49] 2026-01-09 14:23:53,958 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 09:24:49] 2026-01-09 14:23:53,960 | INFO     | ***************************************
[2026-01-09 09:24:49] 2026-01-09 14:23:53,960 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 09:24:49] 2026-01-09 14:23:53,960 | INFO     | ***************************************
[2026-01-09 09:24:49] 2026-01-09 14:23:53,960 | INFO     | 
[2026-01-09 09:24:49] 2026-01-09 14:23:53,961 | INFO     | architecture information:
[2026-01-09 09:24:49] 2026-01-09 14:23:53,961 | INFO     | executing command: cat /etc/os-release
[2026-01-09 09:24:49] 2026-01-09 14:23:53,972 | INFO     | cat /etc/os-release:
[2026-01-09 09:24:49] NAME="CentOS Linux"
[2026-01-09 09:24:49] VERSION="7 (Core)"
[2026-01-09 09:24:49] ID="centos"
[2026-01-09 09:24:49] ID_LIKE="rhel fedora"
[2026-01-09 09:24:49] VERSION_ID="7"
[2026-01-09 09:24:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 09:24:49] ANSI_COLOR="0;31"
[2026-01-09 09:24:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 09:24:49] HOME_URL="https://www.centos.org/"
[2026-01-09 09:24:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 09:24:49] 
[2026-01-09 09:24:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 09:24:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 09:24:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 09:24:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 09:24:49] 
[2026-01-09 09:24:49] 2026-01-09 14:23:53,973 | INFO     | ***************************************
[2026-01-09 09:24:49] 2026-01-09 14:23:54,476 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-09 09:24:49] 2026-01-09 14:23:54,489 | INFO     | sufficient remaining disk space (28737273856 B)
[2026-01-09 09:24:49] 2026-01-09 14:23:54,489 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 09:24:49] 2026-01-09 14:23:54,489 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 09:24:49] 2026-01-09 14:23:54,489 | INFO     | update_server=False
[2026-01-09 09:24:49] 2026-01-09 14:23:54,489 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 09:24:49] 2026-01-09 14:23:54,490 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 09:24:49] 2026-01-09 14:23:54,509 | INFO     | all payload control threads have been joined
[2026-01-09 09:24:49] 2026-01-09 14:23:54,701 | INFO     | all data control threads have been joined
[2026-01-09 09:24:49] 2026-01-09 14:23:54,783 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 09:24:49] 2026-01-09 14:23:54,783 | INFO     | aborting loop
[2026-01-09 09:24:49] 2026-01-09 14:23:55,167 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 09:24:49] 2026-01-09 14:23:55,491 | INFO     | [job] queue monitor thread has finished
[2026-01-09 09:24:49] 2026-01-09 14:23:55,495 | INFO     | [job] retrieve thread has finished
[2026-01-09 09:24:49] 2026-01-09 14:23:55,514 | INFO     | [payload] control thread has finished
[2026-01-09 09:24:49] 2026-01-09 14:23:55,707 | INFO     | [data] control thread has finished
[2026-01-09 09:24:49] 2026-01-09 14:23:55,714 | INFO     | all job control threads have been joined
[2026-01-09 09:24:49] 2026-01-09 14:23:55,799 | INFO     | [job] job monitor thread has finished
[2026-01-09 09:24:49] 2026-01-09 14:23:56,182 | INFO     | [payload] validate_post thread has finished
[2026-01-09 09:24:49] 2026-01-09 14:23:56,191 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 09:24:49] 2026-01-09 14:23:56,266 | INFO     | [data] copytool_in thread has finished
[2026-01-09 09:24:49] 2026-01-09 14:23:56,343 | INFO     | [job] validate thread has finished
[2026-01-09 09:24:49] 2026-01-09 14:23:56,428 | INFO     | [payload] failed_post thread has finished
[2026-01-09 09:24:49] 2026-01-09 14:23:56,527 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 09:24:49] 2026-01-09 14:23:56,706 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 09:24:49] 2026-01-09 14:23:56,719 | INFO     | [job] control thread has finished
[2026-01-09 09:24:49] 2026-01-09 14:23:56,888 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 09:24:49] 2026-01-09 14:23:57,173 | INFO     | [data] copytool_out thread has finished
[2026-01-09 09:24:49] 2026-01-09 14:23:57,744 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 09:24:49] 2026-01-09 14:24:01,749 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 09:24:49] 2026-01-09 14:24:24,258 | INFO     | 15578s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-09 09:24:49] 2026-01-09 14:24:25,381 | INFO     | PID=29799 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 09:24:49] 2026-01-09 14:24:25,382 | INFO     | .. there are 2 such processes running
[2026-01-09 09:24:49] 2026-01-09 14:24:25,389 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 09:24:49] 2026-01-09 14:24:25,389 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 09:24:49] 2026-01-09 14:24:25,389 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 09:24:49] 2026-01-09 14:24:43,288 | INFO     | [monitor] cgroup control has ended
[2026-01-09 09:24:49] 2026-01-09 14:24:44,112 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139634614839104)>', '<ExcThread(monitor, started 139634168272640)>']
[2026-01-09 09:24:49] 2026-01-09 14:24:44,482 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 09:24:49] 2026-01-09 14:24:44,482 | INFO     | [monitor] control thread has ended
[2026-01-09 09:24:49] 2026-01-09 14:24:49,137 | INFO     | all workflow threads have been joined
[2026-01-09 09:24:49] 2026-01-09 14:24:49,137 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 09:24:49] 2026-01-09 14:24:49,148 | INFO     | traces error code: 0
[2026-01-09 09:24:49] 2026-01-09 14:24:49,148 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 09:24:49] 2026-01-09 14:24:49,235 [wrapper] ==== pilot stdout END ====
[2026-01-09 09:24:49] 2026-01-09 14:24:49,238 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 09:24:49] 2026-01-09 14:24:49,240 [wrapper] pilotpid: 29799
[2026-01-09 09:24:49] 2026-01-09 14:24:49,242 [wrapper] Pilot exit status: 0
[2026-01-09 09:24:49] 2026-01-09 14:24:49,253 [wrapper] pandaids: 6963188263
[2026-01-09 09:24:49] 2026-01-09 14:24:49,292 [wrapper] cleanup supervisor_pilot 18952 29800
[2026-01-09 09:24:49] 2026-01-09 14:24:49,296 [wrapper] Test setup, not cleaning
[2026-01-09 09:24:49] 2026-01-09 14:24:49,300 [wrapper] apfmon messages muted
[2026-01-09 09:24:49] 2026-01-09 14:24:49,303 [wrapper] ==== wrapper stdout END ====
[2026-01-09 09:24:49] 2026-01-09 14:24:49,306 [wrapper] ==== wrapper stderr END ====
[2026-01-09 09:24:49]  *** Error codes and diagnostics ***
[2026-01-09 09:24:49]     "exeErrorCode": 0,
[2026-01-09 09:24:49]     "exeErrorDiag": "",
[2026-01-09 09:24:49]     "pilotErrorCode": 0,
[2026-01-09 09:24:49]     "pilotErrorDiag": "",
[2026-01-09 09:24:49]  *** Listing of results directory ***
[2026-01-09 09:24:49] total 444456
[2026-01-09 09:24:49] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 23:21 queuedata.json
[2026-01-09 09:24:49] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-09 09:24:49] -rwx------ 1 boincer umatlas     36322 Jan  8 23:22 runpilot2-wrapper.sh
[2026-01-09 09:24:49] -rw-r--r-- 1 boincer umatlas       100 Jan  9 05:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 09:24:49] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 05:04 run_atlas
[2026-01-09 09:24:49] -rw-r--r-- 1 boincer umatlas       105 Jan  9 05:04 job.xml
[2026-01-09 09:24:49] -rw-r--r-- 2 boincer umatlas 224620357 Jan  9 05:04 EVNT.47898824._001435.pool.root.1
[2026-01-09 09:24:49] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 05:04 start_atlas.sh
[2026-01-09 09:24:49] drwxrwx--x 2 boincer umatlas      4096 Jan  9 05:04 shared
[2026-01-09 09:24:49] -rw-r--r-- 2 boincer umatlas    592395 Jan  9 05:04 input.tar.gz
[2026-01-09 09:24:49] -rw-r--r-- 1 boincer umatlas         0 Jan  9 05:04 boinc_lockfile
[2026-01-09 09:24:49] -rw-r--r-- 1 boincer umatlas      2520 Jan  9 05:04 pandaJob.out
[2026-01-09 09:24:49] -rw------- 1 boincer umatlas        57 Jan  9 05:04 setup.sh.local
[2026-01-09 09:24:49] -rw------- 1 boincer umatlas    989751 Jan  9 05:04 agis_schedconf.cvmfs.json
[2026-01-09 09:24:49] drwx------ 5 boincer umatlas      4096 Jan  9 05:04 pilot3
[2026-01-09 09:24:49] -rw-r--r-- 1 boincer umatlas      5951 Jan  9 09:19 init_data.xml
[2026-01-09 09:24:49] -rw-r--r-- 1 boincer umatlas       531 Jan  9 09:23 boinc_task_state.xml
[2026-01-09 09:24:49] -rw------- 1 boincer umatlas 221276062 Jan  9 09:23 HITS.47898826._037415.pool.root.1
[2026-01-09 09:24:49] -rw------- 1 boincer umatlas      1051 Jan  9 09:23 memory_monitor_summary.json
[2026-01-09 09:24:49] -rw------- 1 boincer umatlas   1516240 Jan  9 09:23 agis_ddmendpoints.agis.ALL.json
[2026-01-09 09:24:49] -rw------- 1 boincer umatlas    486228 Jan  9 09:23 log.47898826._037415.job.log.tgz.1
[2026-01-09 09:24:49] -rw------- 1 boincer umatlas        95 Jan  9 09:23 pilot_heartbeat.json
[2026-01-09 09:24:49] -rw------- 1 boincer umatlas      7853 Jan  9 09:23 heartbeat.json
[2026-01-09 09:24:49] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 09:24 boinc_mmap_file
[2026-01-09 09:24:49] -rw-r--r-- 1 boincer umatlas        29 Jan  9 09:24 wrapper_checkpoint.txt
[2026-01-09 09:24:49] -rw------- 1 boincer umatlas      4937 Jan  9 09:24 pilotlog.txt
[2026-01-09 09:24:49] -rw------- 1 boincer umatlas   2167271 Jan  9 09:24 log.47898826._037415.job.log.1
[2026-01-09 09:24:49] -rw------- 1 boincer umatlas       357 Jan  9 09:24 output.list
[2026-01-09 09:24:49] -rw-r--r-- 1 boincer umatlas       620 Jan  9 09:24 runtime_log
[2026-01-09 09:24:49] -rw------- 1 boincer umatlas   2672640 Jan  9 09:24 result.tar.gz
[2026-01-09 09:24:49] -rw------- 1 boincer umatlas       661 Jan  9 09:24 4IUKDmoBJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmr5lKDmZ8t5gn.diag
[2026-01-09 09:24:49] -rw-r--r-- 1 boincer umatlas      9338 Jan  9 09:24 runtime_log.err
[2026-01-09 09:24:49] -rw-r--r-- 1 boincer umatlas     20916 Jan  9 09:24 stderr.txt
[2026-01-09 09:24:49] HITS file was successfully produced:
[2026-01-09 09:24:49] -rw------- 1 boincer umatlas 221276062 Jan  9 09:23 shared/HITS.pool.root.1
[2026-01-09 09:24:49]  *** Contents of shared directory: ***
[2026-01-09 09:24:49] total 438664
[2026-01-09 09:24:49] -rw-r--r-- 2 boincer umatlas 224620357 Jan  9 05:04 ATLAS.root_0
[2026-01-09 09:24:49] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 05:04 start_atlas.sh
[2026-01-09 09:24:49] -rw-r--r-- 2 boincer umatlas    592395 Jan  9 05:04 input.tar.gz
[2026-01-09 09:24:49] -rw------- 1 boincer umatlas 221276062 Jan  9 09:23 HITS.pool.root.1
[2026-01-09 09:24:49] -rw------- 1 boincer umatlas   2672640 Jan  9 09:24 result.tar.gz
09:24:51 (26070): run_atlas exited; CPU time 119559.861877
09:24:51 (26070): called boinc_finish(0)

</stderr_txt>
]]>

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