Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:50:05 (8441): wrapper (7.7.26015): starting
04:50:05 (8441): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 04:50:05] Arguments: --nthreads 12
[2026-01-09 04:50:05] Threads: 12
[2026-01-09 04:50:05] Checking for CVMFS
[2026-01-09 04:50:05] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 04:50:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 04:50:05] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 04:50:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 04:50:05] 2.11.2.0 2933 350884 94860 154938 3 59 17435996 20275200 1 130560 2 148236053 99.944 21734688 17070 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 04:50:05] CVMFS is ok
[2026-01-09 04:50:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 04:50:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 04:50:05] Further information can be found at the LHC@home message board.
[2026-01-09 04:50:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 04:50:05] Checking for apptainer binary...
[2026-01-09 04:50:05] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 04:50:05] Running /usr/bin/apptainer --version
[2026-01-09 04:50:05] apptainer version 1.3.2-1.el7
[2026-01-09 04:50:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 04:50:07] c-205-15.aglt2.org
[2026-01-09 04:50:07] apptainer works
[2026-01-09 04:50:07] Set ATHENA_PROC_NUMBER=12
[2026-01-09 04:50:07] Set ATHENA_CORE_NUMBER=12
[2026-01-09 04:50:07] Starting ATLAS job with PandaID=6963161000
[2026-01-09 04:50:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 06:29:54]  *** The last 200 lines of the pilot log: ***
[2026-01-09 06:29:54]  scope=mc23_13p6TeV
[2026-01-09 06:29:54]  status=None
[2026-01-09 06:29:54]  status_code=0
[2026-01-09 06:29:54]  storage_token=
[2026-01-09 06:29:54]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6963161000/log.47898826._032823.job.log.tgz.1
[2026-01-09 06:29:54]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/39/fd/log.47898826._032823.job.log.tgz.1
[2026-01-09 06:29:54]  workdir=None
[2026-01-09 06:29:54] ]
[2026-01-09 06:29:54] 2026-01-09 11:29:13,073 | INFO     | transferring file log.47898826._032823.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6963161000/log.47898826._032823.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-09 06:29:54] 2026-01-09 11:29:13,074 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6963161000/log.47898826._032823.job.log.tgz.1 /tmp/boinchome/slots/0/log.47898826._032823.job
[2026-01-09 06:29:54] 2026-01-09 11:29:13,103 | INFO     | adding to output.list: log.47898826._032823.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/39/fd/log.47898826._032823.job.log.tg
[2026-01-09 06:29:54] 2026-01-09 11:29:13,104 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-09 06:29:54] 2026-01-09 11:29:13,104 | INFO     | summary of transferred files:
[2026-01-09 06:29:54] 2026-01-09 11:29:13,104 | INFO     |  -- lfn=log.47898826._032823.job.log.tgz.1, status_code=0, status=transferred
[2026-01-09 06:29:54] 2026-01-09 11:29:13,104 | INFO     | stage-out finished correctly
[2026-01-09 06:29:54] 2026-01-09 11:29:14,520 | WARNING  | process 19184 can no longer be monitored (due to stat problems) - aborting
[2026-01-09 06:29:54] 2026-01-09 11:29:14,520 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963161000/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 06:29:54] 2026-01-09 11:29:14,607 | INFO     | number of running child processes to parent process 19184: 1
[2026-01-09 06:29:54] 2026-01-09 11:29:14,607 | INFO     | maximum number of monitored processes: 6
[2026-01-09 06:29:54] 2026-01-09 11:29:14,759 | INFO     | time since job start (5932s) is within the limit (349056.0s)
[2026-01-09 06:29:54] 2026-01-09 11:29:15,400 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-09 06:29:54] 2026-01-09 11:29:15,879 | INFO     | PID=12793 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 06:29:54] 2026-01-09 11:29:16,613 | INFO     | job 6963161000 has state=finished
[2026-01-09 06:29:54] 2026-01-09 11:29:16,613 | INFO     | preparing for final server update for job 6963161000 in state='finished'
[2026-01-09 06:29:54] 2026-01-09 11:29:16,613 | INFO     | this job has now completed (state=finished)
[2026-01-09 06:29:54] 2026-01-09 11:29:16,614 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-09 06:29:54] 2026-01-09 11:29:16,614 | INFO     | log transfer has been attempted: DONE
[2026-01-09 06:29:54] 2026-01-09 11:29:16,614 | INFO     | job 6963161000 has finished - writing final server update
[2026-01-09 06:29:54] 2026-01-09 11:29:16,614 | INFO     | total number of processed events: 400 (read)
[2026-01-09 06:29:54] 2026-01-09 11:29:16,615 | INFO     | executing command: lscpu
[2026-01-09 06:29:54] 2026-01-09 11:29:16,640 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 06:29:54] 2026-01-09 11:29:16,880 | INFO     | time since job start (5934s) is within the limit (349056.0s)
[2026-01-09 06:29:54] 2026-01-09 11:29:17,110 | INFO     | monitor loop #438: job 0:6963161000 is in state 'finished'
[2026-01-09 06:29:54] 2026-01-09 11:29:17,110 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 06:29:54] 2026-01-09 11:29:18,885 | INFO     | time since job start (5936s) is within the limit (349056.0s)
[2026-01-09 06:29:54] 2026-01-09 11:29:19,613 | INFO     | monitor loop #439: job 0:6963161000 is in state 'finished'
[2026-01-09 06:29:54] 2026-01-09 11:29:19,614 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 06:29:54] 2026-01-09 11:29:20,890 | INFO     | time since job start (5938s) is within the limit (349056.0s)
[2026-01-09 06:29:54] 2026-01-09 11:29:21,340 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 06:29:54] 2026-01-09 11:29:21,344 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1740.1666666666667
[2026-01-09 06:29:54] 2026-01-09 11:29:21,346 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963161000/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 06:29:54] 2026-01-09 11:29:21,347 | INFO     | extracted standard info from prmon json
[2026-01-09 06:29:54] 2026-01-09 11:29:21,347 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 06:29:54] 2026-01-09 11:29:21,347 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 06:29:54] 2026-01-09 11:29:21,347 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 06:29:54] 2026-01-09 11:29:21,348 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 06:29:54] 2026-01-09 11:29:21,349 | INFO     | fitting pss+swap vs Time
[2026-01-09 06:29:54] 2026-01-09 11:29:21,350 | INFO     | sum of square deviations: 226022842.5
[2026-01-09 06:29:54] 2026-01-09 11:29:21,350 | INFO     | sum of deviations: -11575226349.0
[2026-01-09 06:29:54] 2026-01-09 11:29:21,350 | INFO     | mean x: 1767955270.5
[2026-01-09 06:29:54] 2026-01-09 11:29:21,351 | INFO     | mean y: 2759373.9111111113
[2026-01-09 06:29:54] 2026-01-09 11:29:21,351 | INFO     | intersect: 90544415272.89407
[2026-01-09 06:29:54] 2026-01-09 11:29:21,351 | INFO     | chi2: 0.07807028383236571
[2026-01-09 06:29:54] 2026-01-09 11:29:21,351 | INFO     | current memory leak: -51.21 B/s (using 90 data points, chi2=0.08)
[2026-01-09 06:29:54] 2026-01-09 11:29:21,351 | INFO     | could have reported an average CPU frequency of 2141 MHz (7 samples)
[2026-01-09 06:29:54] 2026-01-09 11:29:21,352 | INFO     | ..............................
[2026-01-09 06:29:54] 2026-01-09 11:29:21,352 | INFO     | . Timing measurements:
[2026-01-09 06:29:54] 2026-01-09 11:29:21,352 | INFO     | . get job = 0 s
[2026-01-09 06:29:54] 2026-01-09 11:29:21,352 | INFO     | . initial setup = 2 s
[2026-01-09 06:29:54] 2026-01-09 11:29:21,352 | INFO     | . payload setup = 7 s
[2026-01-09 06:29:54] 2026-01-09 11:29:21,352 | INFO     | . stage-in = 0 s
[2026-01-09 06:29:54] 2026-01-09 11:29:21,352 | INFO     | . payload execution = 5903 s
[2026-01-09 06:29:54] 2026-01-09 11:29:21,352 | INFO     | . stage-out = 0 s
[2026-01-09 06:29:54] 2026-01-09 11:29:21,352 | INFO     | . log creation = 0 s
[2026-01-09 06:29:54] 2026-01-09 11:29:21,353 | INFO     | ..............................
[2026-01-09 06:29:54] 2026-01-09 11:29:21,434 | INFO     | 
[2026-01-09 06:29:54] 2026-01-09 11:29:21,434 | INFO     | job summary report
[2026-01-09 06:29:54] 2026-01-09 11:29:21,434 | INFO     | --------------------------------------------------
[2026-01-09 06:29:54] 2026-01-09 11:29:21,434 | INFO     | PanDA job id: 6963161000
[2026-01-09 06:29:54] 2026-01-09 11:29:21,434 | INFO     | task id: 47898826
[2026-01-09 06:29:54] 2026-01-09 11:29:21,434 | INFO     | errors: (none)
[2026-01-09 06:29:54] 2026-01-09 11:29:21,434 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 06:29:54] 2026-01-09 11:29:21,434 | INFO     | pilot state: finished 
[2026-01-09 06:29:54] 2026-01-09 11:29:21,434 | INFO     | transexitcode: 0
[2026-01-09 06:29:54] 2026-01-09 11:29:21,435 | INFO     | exeerrorcode: 0
[2026-01-09 06:29:54] 2026-01-09 11:29:21,435 | INFO     | exeerrordiag: 
[2026-01-09 06:29:54] 2026-01-09 11:29:21,435 | INFO     | exitcode: 0
[2026-01-09 06:29:54] 2026-01-09 11:29:21,435 | INFO     | exitmsg: OK
[2026-01-09 06:29:54] 2026-01-09 11:29:21,435 | INFO     | cpuconsumptiontime: 65402 s
[2026-01-09 06:29:54] 2026-01-09 11:29:21,435 | INFO     | nevents: 400
[2026-01-09 06:29:54] 2026-01-09 11:29:21,435 | INFO     | neventsw: 0
[2026-01-09 06:29:54] 2026-01-09 11:29:21,435 | INFO     | pid: 19184
[2026-01-09 06:29:54] 2026-01-09 11:29:21,435 | INFO     | pgrp: 19184
[2026-01-09 06:29:54] 2026-01-09 11:29:21,435 | INFO     | corecount: 12
[2026-01-09 06:29:54] 2026-01-09 11:29:21,436 | INFO     | event service: False
[2026-01-09 06:29:54] 2026-01-09 11:29:21,436 | INFO     | sizes: {0: 2283744, 1: 2283999, 6: 2284261, 12: 2284289, 5914: 2310985, 5915: 2319983, 5918: 2320167, 5924: 2320361}
[2026-01-09 06:29:54] 2026-01-09 11:29:21,436 | INFO     | --------------------------------------------------
[2026-01-09 06:29:54] 2026-01-09 11:29:21,436 | INFO     | 
[2026-01-09 06:29:54] 2026-01-09 11:29:21,436 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 06:29:54] 2026-01-09 11:29:21,459 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 06:29:54] 2026-01-09 11:29:21,459 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 06:29:54] 2026-01-09 11:29:21,460 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 06:29:54] 2026-01-09 11:29:21,460 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 06:29:54] 2026-01-09 11:29:21,460 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 06:29:54] 2026-01-09 11:29:21,460 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 06:29:54] 2026-01-09 11:29:21,460 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 06:29:54] 2026-01-09 11:29:21,460 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 06:29:54] 2026-01-09 11:29:21,461 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 06:29:54] 2026-01-09 11:29:21,461 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 06:29:54] 2026-01-09 11:29:21,461 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 06:29:54] 2026-01-09 11:29:21,461 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 06:29:54] 2026-01-09 11:29:21,461 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 06:29:54] 2026-01-09 11:29:21,461 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 06:29:54] 2026-01-09 11:29:21,462 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 06:29:54] 2026-01-09 11:29:21,462 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 06:29:54] 2026-01-09 11:29:21,462 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 06:29:54] 2026-01-09 11:29:21,462 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 06:29:54] 2026-01-09 11:29:21,462 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 06:29:54] 2026-01-09 11:29:21,462 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 06:29:54] 2026-01-09 11:29:21,463 | INFO     | job 6963161000 has completed (purged errors)
[2026-01-09 06:29:54] 2026-01-09 11:29:21,463 | INFO     | overall cleanup function is called
[2026-01-09 06:29:54] 2026-01-09 11:29:22,471 | INFO     | --- collectZombieJob: --- 10, [19184]
[2026-01-09 06:29:54] 2026-01-09 11:29:22,471 | INFO     | zombie collector waiting for pid 19184
[2026-01-09 06:29:54] 2026-01-09 11:29:22,471 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 06:29:54] 2026-01-09 11:29:22,471 | INFO     | collected zombie processes
[2026-01-09 06:29:54] 2026-01-09 11:29:22,472 | INFO     | will attempt to kill all subprocesses of pid=19184
[2026-01-09 06:29:54] 2026-01-09 11:29:22,561 | INFO     | process IDs to be killed: [19184] (in reverse order)
[2026-01-09 06:29:54] 2026-01-09 11:29:22,617 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 06:29:54] 2026-01-09 11:29:22,618 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 06:29:54] 2026-01-09 11:29:22,622 | INFO     | did not find any defunct processes belonging to 19184
[2026-01-09 06:29:54] 2026-01-09 11:29:22,625 | INFO     | did not find any defunct processes belonging to 19184
[2026-01-09 06:29:54] 2026-01-09 11:29:22,625 | INFO     | ready for new job
[2026-01-09 06:29:54] 2026-01-09 11:29:22,625 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 06:29:54] 2026-01-09 11:29:22,626 | INFO     | ***************************************
[2026-01-09 06:29:54] 2026-01-09 11:29:22,626 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 06:29:54] 2026-01-09 11:29:22,626 | INFO     | ***************************************
[2026-01-09 06:29:54] 2026-01-09 11:29:22,627 | INFO     | 
[2026-01-09 06:29:54] 2026-01-09 11:29:22,627 | INFO     | architecture information:
[2026-01-09 06:29:54] 2026-01-09 11:29:22,628 | INFO     | executing command: cat /etc/os-release
[2026-01-09 06:29:54] 2026-01-09 11:29:22,641 | INFO     | cat /etc/os-release:
[2026-01-09 06:29:54] NAME="CentOS Linux"
[2026-01-09 06:29:54] VERSION="7 (Core)"
[2026-01-09 06:29:54] ID="centos"
[2026-01-09 06:29:54] ID_LIKE="rhel fedora"
[2026-01-09 06:29:54] VERSION_ID="7"
[2026-01-09 06:29:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 06:29:54] ANSI_COLOR="0;31"
[2026-01-09 06:29:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 06:29:54] HOME_URL="https://www.centos.org/"
[2026-01-09 06:29:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 06:29:54] 
[2026-01-09 06:29:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 06:29:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 06:29:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 06:29:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 06:29:54] 
[2026-01-09 06:29:54] 2026-01-09 11:29:22,641 | INFO     | ***************************************
[2026-01-09 06:29:54] 2026-01-09 11:29:23,144 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 06:29:54] 2026-01-09 11:29:23,161 | INFO     | sufficient remaining disk space (29312942080 B)
[2026-01-09 06:29:54] 2026-01-09 11:29:23,161 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 06:29:54] 2026-01-09 11:29:23,162 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 06:29:54] 2026-01-09 11:29:23,162 | INFO     | update_server=False
[2026-01-09 06:29:54] 2026-01-09 11:29:23,162 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 06:29:54] 2026-01-09 11:29:23,162 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 06:29:54] 2026-01-09 11:29:23,163 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 06:29:54] 2026-01-09 11:29:23,163 | INFO     | aborting loop
[2026-01-09 06:29:54] 2026-01-09 11:29:23,258 | INFO     | all data control threads have been joined
[2026-01-09 06:29:54] 2026-01-09 11:29:23,481 | INFO     | all payload control threads have been joined
[2026-01-09 06:29:54] 2026-01-09 11:29:23,700 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 06:29:54] 2026-01-09 11:29:24,168 | INFO     | [job] retrieve thread has finished
[2026-01-09 06:29:54] 2026-01-09 11:29:24,168 | INFO     | [job] queue monitor thread has finished
[2026-01-09 06:29:54] 2026-01-09 11:29:24,169 | INFO     | [job] job monitor thread has finished
[2026-01-09 06:29:54] 2026-01-09 11:29:24,178 | INFO     | all job control threads have been joined
[2026-01-09 06:29:54] 2026-01-09 11:29:24,264 | INFO     | [data] control thread has finished
[2026-01-09 06:29:54] 2026-01-09 11:29:24,483 | INFO     | [payload] control thread has finished
[2026-01-09 06:29:54] 2026-01-09 11:29:24,504 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 06:29:54] 2026-01-09 11:29:24,520 | INFO     | [payload] validate_post thread has finished
[2026-01-09 06:29:54] 2026-01-09 11:29:24,526 | INFO     | [data] copytool_in thread has finished
[2026-01-09 06:29:54] 2026-01-09 11:29:24,822 | INFO     | [job] validate thread has finished
[2026-01-09 06:29:54] 2026-01-09 11:29:24,844 | INFO     | [payload] failed_post thread has finished
[2026-01-09 06:29:54] 2026-01-09 11:29:25,180 | INFO     | [job] control thread has finished
[2026-01-09 06:29:54] 2026-01-09 11:29:25,240 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 06:29:54] 2026-01-09 11:29:25,376 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 06:29:54] 2026-01-09 11:29:25,705 | INFO     | [data] copytool_out thread has finished
[2026-01-09 06:29:54] 2026-01-09 11:29:25,987 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 06:29:54] 2026-01-09 11:29:29,993 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 06:29:54] 2026-01-09 11:29:31,154 | INFO     | [monitor] cgroup control has ended
[2026-01-09 06:29:54] 2026-01-09 11:29:33,450 | INFO     | job.realtimelogging is not enabled
[2026-01-09 06:29:54] 2026-01-09 11:29:34,455 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 06:29:54] 2026-01-09 11:29:35,483 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140102303799104)>', '<ExcThread(monitor, started 140101388576512)>']
[2026-01-09 06:29:54] 2026-01-09 11:29:40,508 | INFO     | all workflow threads have been joined
[2026-01-09 06:29:54] 2026-01-09 11:29:40,517 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 06:29:54] 2026-01-09 11:29:40,518 | INFO     | traces error code: 0
[2026-01-09 06:29:54] 2026-01-09 11:29:40,518 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 06:29:54] 2026-01-09 11:29:54,099 | INFO     | PID=12793 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 06:29:54] 2026-01-09 11:29:54,099 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 06:29:54] 2026-01-09 11:29:54,100 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 06:29:54] 2026-01-09 11:29:54,100 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 06:29:54] 2026-01-09 11:29:54,100 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 06:29:54] 2026-01-09 11:29:54,100 | INFO     | [monitor] control thread has ended
[2026-01-09 06:29:54] 2026-01-09 11:29:54,192 [wrapper] ==== pilot stdout END ====
[2026-01-09 06:29:54] 2026-01-09 11:29:54,195 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 06:29:54] 2026-01-09 11:29:54,199 [wrapper] pilotpid: 12793
[2026-01-09 06:29:54] 2026-01-09 11:29:54,203 [wrapper] Pilot exit status: 0
[2026-01-09 06:29:54] 2026-01-09 11:29:54,218 [wrapper] pandaids: 6963161000
[2026-01-09 06:29:54] 2026-01-09 11:29:54,259 [wrapper] cleanup supervisor_pilot 20442 12794
[2026-01-09 06:29:54] 2026-01-09 11:29:54,263 [wrapper] Test setup, not cleaning
[2026-01-09 06:29:54] 2026-01-09 11:29:54,267 [wrapper] apfmon messages muted
[2026-01-09 06:29:54] 2026-01-09 11:29:54,270 [wrapper] ==== wrapper stdout END ====
[2026-01-09 06:29:54] 2026-01-09 11:29:54,274 [wrapper] ==== wrapper stderr END ====
[2026-01-09 06:29:54]  *** Error codes and diagnostics ***
[2026-01-09 06:29:54]     "exeErrorCode": 0,
[2026-01-09 06:29:54]     "exeErrorDiag": "",
[2026-01-09 06:29:54]     "pilotErrorCode": 0,
[2026-01-09 06:29:54]     "pilotErrorDiag": "",
[2026-01-09 06:29:54]  *** Listing of results directory ***
[2026-01-09 06:29:54] total 442668
[2026-01-09 06:29:54] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 16:44 pilot3.tar.gz
[2026-01-09 06:29:54] -rwx------ 1 boincer umatlas     36322 Jan  8 16:46 runpilot2-wrapper.sh
[2026-01-09 06:29:54] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 16:47 queuedata.json
[2026-01-09 06:29:54] -rw-r--r-- 1 boincer umatlas       100 Jan  9 04:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 06:29:54] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 04:50 run_atlas
[2026-01-09 06:29:54] -rw-r--r-- 1 boincer umatlas       105 Jan  9 04:50 job.xml
[2026-01-09 06:29:54] -rw-r--r-- 2 boincer umatlas 224071841 Jan  9 04:50 EVNT.47898824._001268.pool.root.1
[2026-01-09 06:29:54] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 04:50 start_atlas.sh
[2026-01-09 06:29:54] drwxrwx--x 2 boincer umatlas      4096 Jan  9 04:50 shared
[2026-01-09 06:29:54] -rw-r--r-- 2 boincer umatlas    592397 Jan  9 04:50 input.tar.gz
[2026-01-09 06:29:54] -rw-r--r-- 1 boincer umatlas         0 Jan  9 04:50 boinc_lockfile
[2026-01-09 06:29:54] -rw-r--r-- 1 boincer umatlas      2520 Jan  9 04:50 pandaJob.out
[2026-01-09 06:29:54] -rw------- 1 boincer umatlas        57 Jan  9 04:50 setup.sh.local
[2026-01-09 06:29:54] -rw------- 1 boincer umatlas    989751 Jan  9 04:50 agis_schedconf.cvmfs.json
[2026-01-09 06:29:54] -rw------- 1 boincer umatlas   1516240 Jan  9 04:50 agis_ddmendpoints.agis.ALL.json
[2026-01-09 06:29:54] drwx------ 5 boincer umatlas      4096 Jan  9 04:50 pilot3
[2026-01-09 06:29:54] -rw-r--r-- 1 boincer umatlas      5952 Jan  9 06:27 init_data.xml
[2026-01-09 06:29:54] -rw------- 1 boincer umatlas 222778712 Jan  9 06:28 HITS.47898826._032823.pool.root.1
[2026-01-09 06:29:54] -rw-r--r-- 1 boincer umatlas       529 Jan  9 06:28 boinc_task_state.xml
[2026-01-09 06:29:54] -rw------- 1 boincer umatlas      1046 Jan  9 06:29 memory_monitor_summary.json
[2026-01-09 06:29:54] -rw------- 1 boincer umatlas    420722 Jan  9 06:29 log.47898826._032823.job.log.tgz.1
[2026-01-09 06:29:54] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 06:29 boinc_mmap_file
[2026-01-09 06:29:54] -rw-r--r-- 1 boincer umatlas        27 Jan  9 06:29 wrapper_checkpoint.txt
[2026-01-09 06:29:54] -rw------- 1 boincer umatlas      7852 Jan  9 06:29 heartbeat.json
[2026-01-09 06:29:54] -rw------- 1 boincer umatlas        95 Jan  9 06:29 pilot_heartbeat.json
[2026-01-09 06:29:54] -rw------- 1 boincer umatlas       745 Jan  9 06:29 pilotlog.txt
[2026-01-09 06:29:54] -rw------- 1 boincer umatlas    843837 Jan  9 06:29 log.47898826._032823.job.log.1
[2026-01-09 06:29:54] -rw------- 1 boincer umatlas       357 Jan  9 06:29 output.list
[2026-01-09 06:29:54] -rw-r--r-- 1 boincer umatlas       620 Jan  9 06:29 runtime_log
[2026-01-09 06:29:54] -rw------- 1 boincer umatlas   1280000 Jan  9 06:29 result.tar.gz
[2026-01-09 06:29:54] -rw-r--r-- 1 boincer umatlas      9344 Jan  9 06:29 runtime_log.err
[2026-01-09 06:29:54] -rw------- 1 boincer umatlas       659 Jan  9 06:29 nipMDm20Cy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm9FgKDmSnAKsm.diag
[2026-01-09 06:29:54] -rw-r--r-- 1 boincer umatlas     22089 Jan  9 06:29 stderr.txt
[2026-01-09 06:29:54] HITS file was successfully produced:
[2026-01-09 06:29:54] -rw------- 1 boincer umatlas 222778712 Jan  9 06:28 shared/HITS.pool.root.1
[2026-01-09 06:29:54]  *** Contents of shared directory: ***
[2026-01-09 06:29:54] total 438236
[2026-01-09 06:29:54] -rw-r--r-- 2 boincer umatlas 224071841 Jan  9 04:50 ATLAS.root_0
[2026-01-09 06:29:54] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 04:50 start_atlas.sh
[2026-01-09 06:29:54] -rw-r--r-- 2 boincer umatlas    592397 Jan  9 04:50 input.tar.gz
[2026-01-09 06:29:54] -rw------- 1 boincer umatlas 222778712 Jan  9 06:28 HITS.pool.root.1
[2026-01-09 06:29:54] -rw------- 1 boincer umatlas   1280000 Jan  9 06:29 result.tar.gz
06:29:55 (8441): run_atlas exited; CPU time 65365.226670
06:29:55 (8441): called boinc_finish(0)

</stderr_txt>
]]>

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