Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
20:03:52 (782274): wrapper (7.7.26015): starting
20:03:52 (782274): wrapper: running run_atlas (--nthreads 4)
[2026-01-09 20:03:52] Arguments: --nthreads 4
[2026-01-09 20:03:52] Threads: 4
[2026-01-09 20:03:52] Checking for CVMFS
[2026-01-09 20:03:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 20:03:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 20:03:52] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 20:03:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 20:03:52] 2.9.2.0 211398 1922 86692 154953 1 188 36527239 36864000 0 130560 0 1464942 99.989 72962 3596 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-09 20:03:52] CVMFS is ok
[2026-01-09 20:03:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 20:03:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 20:03:52] Further information can be found at the LHC@home message board.
[2026-01-09 20:03:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 20:03:52] Checking for apptainer binary...
[2026-01-09 20:03:52] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 20:03:52] Running /usr/bin/apptainer --version
[2026-01-09 20:03:52] apptainer version 1.4.1-1.1
[2026-01-09 20:03:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 20:03:52] thA381
[2026-01-09 20:03:52] apptainer works
[2026-01-09 20:03:52] Set ATHENA_PROC_NUMBER=4
[2026-01-09 20:03:52] Set ATHENA_CORE_NUMBER=4
[2026-01-09 20:03:52] Starting ATLAS job with PandaID=6963161139
[2026-01-09 20:03:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 21:46:31]  *** The last 200 lines of the pilot log: ***
[2026-01-09 21:46:31] 2026-01-09 20:46:01,909 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:46:31] 2026-01-09 20:46:01,909 | INFO     | will abort loop
[2026-01-09 21:46:31] 2026-01-09 20:46:02,254 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 21:46:31] 2026-01-09 20:46:02,782 | INFO     | all data control threads have been joined
[2026-01-09 21:46:31] 2026-01-09 20:46:02,903 | INFO     | [job] retrieve thread has finished
[2026-01-09 21:46:31] 2026-01-09 20:46:02,903 | INFO     | [job] queue monitor thread has finished
[2026-01-09 21:46:31] 2026-01-09 20:46:02,914 | INFO     | [job] job monitor thread has finished
[2026-01-09 21:46:31] 2026-01-09 20:46:03,127 | INFO     | [payload] validate_post thread has finished
[2026-01-09 21:46:31] 2026-01-09 20:46:03,174 | INFO     | all job control threads have been joined
[2026-01-09 21:46:31] 2026-01-09 20:46:03,223 | INFO     | all payload control threads have been joined
[2026-01-09 21:46:31] 2026-01-09 20:46:03,227 | INFO     | [data] copytool_in thread has finished
[2026-01-09 21:46:31] 2026-01-09 20:46:03,401 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 21:46:31] 2026-01-09 20:46:03,788 | INFO     | [data] control thread has finished
[2026-01-09 21:46:31] 2026-01-09 20:46:04,024 | INFO     | [job] validate thread has finished
[2026-01-09 21:46:31] 2026-01-09 20:46:04,072 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 21:46:31] 2026-01-09 20:46:04,176 | INFO     | [job] control thread has finished
[2026-01-09 21:46:31] 2026-01-09 20:46:04,204 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 21:46:31] 2026-01-09 20:46:04,209 | INFO     | [payload] failed_post thread has finished
[2026-01-09 21:46:31] 2026-01-09 20:46:04,228 | INFO     | [payload] control thread has finished
[2026-01-09 21:46:31] 2026-01-09 20:46:04,260 | INFO     | [data] copytool_out thread has finished
[2026-01-09 21:46:31] 2026-01-09 20:46:04,790 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 21:46:31] 2026-01-09 20:46:07,991 | INFO     | [monitor] cgroup control has ended
[2026-01-09 21:46:31] 2026-01-09 20:46:08,797 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 21:46:31] 2026-01-09 20:46:12,410 | INFO     | job.realtimelogging is not enabled
[2026-01-09 21:46:31] 2026-01-09 20:46:13,416 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 21:46:31] 2026-01-09 20:46:14,028 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140714585454400)>', '<ExcThread(monitor, started 140713664706304)>']
[2026-01-09 21:46:31] 2026-01-09 20:46:19,054 | INFO     | all workflow threads have been joined
[2026-01-09 21:46:31] 2026-01-09 20:46:19,054 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 21:46:31] 2026-01-09 20:46:19,055 | INFO     | traces error code: 0
[2026-01-09 21:46:31] 2026-01-09 20:46:19,055 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 21:46:31] 2026-01-09 20:46:31,424 | INFO     | PID=786090 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 21:46:31] 2026-01-09 20:46:31,424 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 21:46:31] 2026-01-09 20:46:31,424 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 21:46:31] 2026-01-09 20:46:31,424 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 21:46:31] 2026-01-09 20:46:31,424 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 21:46:31] 2026-01-09 20:46:31,424 | INFO     | [monitor] control thread has ended
[2026-01-09 21:46:31] 2026-01-09 20:46:31,502 [wrapper] ==== pilot stdout END ====
[2026-01-09 21:46:31] 2026-01-09 20:46:31,506 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 21:46:31] 2026-01-09 20:46:31,509 [wrapper] pilotpid: 786090
[2026-01-09 21:46:31] 2026-01-09 20:46:31,513 [wrapper] Pilot exit status: 0
[2026-01-09 21:46:31] 2026-01-09 20:46:31,525 [wrapper] pandaids: 6963161139
[2026-01-09 21:46:31] 2026-01-09 20:46:31,547 [wrapper] cleanup supervisor_pilot  805086 786091
[2026-01-09 21:46:31] 2026-01-09 20:46:31,551 [wrapper] Test setup, not cleaning
[2026-01-09 21:46:31] 2026-01-09 20:46:31,555 [wrapper] apfmon messages muted
[2026-01-09 21:46:31] 2026-01-09 20:46:31,559 [wrapper] ==== wrapper stdout END ====
[2026-01-09 21:46:31] 2026-01-09 20:46:31,563 [wrapper] ==== wrapper stderr END ====
[2026-01-09 21:46:31]  *** Error codes and diagnostics ***
[2026-01-09 21:46:31]     "exeErrorCode": 0,
[2026-01-09 21:46:31]     "exeErrorDiag": "",
[2026-01-09 21:46:31]     "pilotErrorCode": 0,
[2026-01-09 21:46:31]     "pilotErrorDiag": "",
[2026-01-09 21:46:31]  *** Listing of results directory ***
[2026-01-09 21:46:31] total 445140
[2026-01-09 21:46:31] -rw-r--r-- 1 boinc boinc    579449 Jan  8 22:44 pilot3.tar.gz
[2026-01-09 21:46:31] -rwx------ 1 boinc boinc     36322 Jan  8 22:46 runpilot2-wrapper.sh
[2026-01-09 21:46:31] -rw-r--r-- 1 boinc boinc      5112 Jan  8 22:47 queuedata.json
[2026-01-09 21:46:31] -rw-r--r-- 1 boinc boinc       100 Jan  9 20:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 21:46:31] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 20:03 run_atlas
[2026-01-09 21:46:31] -rw-r--r-- 1 boinc boinc       105 Jan  9 20:03 job.xml
[2026-01-09 21:46:31] -rw-r--r-- 2 boinc boinc 225847090 Jan  9 20:03 EVNT.47898824._001269.pool.root.1
[2026-01-09 21:46:31] -rw-r--r-- 2 boinc boinc    592399 Jan  9 20:03 input.tar.gz
[2026-01-09 21:46:31] -rw-r--r-- 2 boinc boinc     15847 Jan  9 20:03 start_atlas.sh
[2026-01-09 21:46:31] drwxrwx--x 2 boinc boinc      4096 Jan  9 20:03 shared
[2026-01-09 21:46:31] -rw-r--r-- 1 boinc boinc         0 Jan  9 20:03 boinc_setup_complete
[2026-01-09 21:46:31] -rw-r--r-- 1 boinc boinc      6376 Jan  9 20:03 init_data.xml
[2026-01-09 21:46:31] -rw-r--r-- 1 boinc boinc         0 Jan  9 20:03 boinc_lockfile
[2026-01-09 21:46:31] -rw-r--r-- 1 boinc boinc      2520 Jan  9 20:03 pandaJob.out
[2026-01-09 21:46:31] -rw------- 1 boinc boinc    989372 Jan  9 20:03 agis_schedconf.cvmfs.json
[2026-01-09 21:46:31] -rw------- 1 boinc boinc   1516240 Jan  9 20:04 agis_ddmendpoints.agis.ALL.json
[2026-01-09 21:46:31] drwx------ 5 boinc boinc      4096 Jan  9 20:04 pilot3
[2026-01-09 21:46:31] -rw-r--r-- 1 boinc boinc       529 Jan  9 21:45 boinc_task_state.xml
[2026-01-09 21:46:31] -rw------- 1 boinc boinc 223703858 Jan  9 21:45 HITS.47898826._032848.pool.root.1
[2026-01-09 21:46:31] -rw------- 1 boinc boinc        95 Jan  9 21:45 pilot_heartbeat.json
[2026-01-09 21:46:31] -rw------- 1 boinc boinc      1015 Jan  9 21:45 memory_monitor_summary.json
[2026-01-09 21:46:31] -rw------- 1 boinc boinc    302538 Jan  9 21:45 log.47898826._032848.job.log.tgz.1
[2026-01-09 21:46:31] -rw------- 1 boinc boinc      7752 Jan  9 21:46 heartbeat.json
[2026-01-09 21:46:31] -rw-r--r-- 1 boinc boinc      8192 Jan  9 21:46 boinc_mmap_file
[2026-01-09 21:46:31] -rw-r--r-- 1 boinc boinc        27 Jan  9 21:46 wrapper_checkpoint.txt
[2026-01-09 21:46:31] -rw------- 1 boinc boinc       746 Jan  9 21:46 pilotlog.txt
[2026-01-09 21:46:31] -rw------- 1 boinc boinc    888244 Jan  9 21:46 log.47898826._032848.job.log.1
[2026-01-09 21:46:31] -rw------- 1 boinc boinc       357 Jan  9 21:46 output.list
[2026-01-09 21:46:31] -rw-r--r-- 1 boinc boinc       620 Jan  9 21:46 runtime_log
[2026-01-09 21:46:31] -rw------- 1 boinc boinc   1208320 Jan  9 21:46 result.tar.gz
[2026-01-09 21:46:31] -rw------- 1 boinc boinc       659 Jan  9 21:46 zDCNDm20Cy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmQGgKDmMRLcqm.diag
[2026-01-09 21:46:31] -rw-r--r-- 1 boinc boinc      8897 Jan  9 21:46 runtime_log.err
[2026-01-09 21:46:31] -rw-r--r-- 1 boinc boinc      7157 Jan  9 21:46 stderr.txt
[2026-01-09 21:46:31] HITS file was successfully produced:
[2026-01-09 21:46:31] -rw------- 1 boinc boinc 223703858 Jan  9 21:45 shared/HITS.pool.root.1
[2026-01-09 21:46:31]  *** Contents of shared directory: ***
[2026-01-09 21:46:31] total 440804
[2026-01-09 21:46:31] -rw-r--r-- 2 boinc boinc 225847090 Jan  9 20:03 ATLAS.root_0
[2026-01-09 21:46:31] -rw-r--r-- 2 boinc boinc    592399 Jan  9 20:03 input.tar.gz
[2026-01-09 21:46:31] -rw-r--r-- 2 boinc boinc     15847 Jan  9 20:03 start_atlas.sh
[2026-01-09 21:46:31] -rw------- 1 boinc boinc 223703858 Jan  9 21:45 HITS.pool.root.1
[2026-01-09 21:46:31] -rw------- 1 boinc boinc   1208320 Jan  9 21:46 result.tar.gz
21:46:53 (782274): run_atlas exited; CPU time 23350.665712
21:46:53 (782274): called boinc_finish(0)

</stderr_txt>
]]>

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