Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:23:21 (22937): wrapper (7.7.26015): starting
13:23:21 (22937): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 13:23:21] Arguments: --nthreads 8
[2026-01-09 13:23:21] Threads: 8
[2026-01-09 13:23:21] Checking for CVMFS
[2026-01-09 13:23:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 13:23:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 13:23:21] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 13:23:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 13:23:21] 2.11.2.0 7147 35409 100180 154942 3 57 13321604 25165825 0 130560 0 14759291 99.802 10211861 3656 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 13:23:21] CVMFS is ok
[2026-01-09 13:23:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 13:23:21] Checking for apptainer binary...
[2026-01-09 13:23:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 13:23:21] Running /usr/bin/apptainer --version
[2026-01-09 13:23:21] apptainer version 1.3.2-1.el7
[2026-01-09 13:23:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 13:23:23] cg-vwn412.simple-grid.lan
[2026-01-09 13:23:23] apptainer works
[2026-01-09 13:23:23] Set ATHENA_PROC_NUMBER=8
[2026-01-09 13:23:23] Set ATHENA_CORE_NUMBER=8
[2026-01-09 13:23:23] Starting ATLAS job with PandaID=6963161582
[2026-01-09 13:23:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 16:15:02]  *** The last 200 lines of the pilot log: ***
[2026-01-09 16:15:02] 2026-01-09 15:14:14,540 | INFO     | intersect: 5942812529.729883
[2026-01-09 16:15:02] 2026-01-09 15:14:14,540 | INFO     | chi2: 0.0681339652569689
[2026-01-09 16:15:02] 2026-01-09 15:14:14,540 | INFO     | current chi2=0.0681339652569689 (change=95.50871539829774 %)
[2026-01-09 16:15:02] 2026-01-09 15:14:14,541 | INFO     | sum of square deviations: 1199940638.0
[2026-01-09 16:15:02] 2026-01-09 15:14:14,542 | INFO     | sum of deviations: -2473288920.0000014
[2026-01-09 16:15:02] 2026-01-09 15:14:14,542 | INFO     | mean x: 1767966823.0
[2026-01-09 16:15:02] 2026-01-09 15:14:14,542 | INFO     | mean y: 2510379.585987261
[2026-01-09 16:15:02] 2026-01-09 15:14:14,542 | INFO     | intersect: 3646601275.2336965
[2026-01-09 16:15:02] 2026-01-09 15:14:14,543 | INFO     | chi2: 0.04842796805200334
[2026-01-09 16:15:02] 2026-01-09 15:14:14,543 | INFO     | current chi2=0.04842796805200334 (change=28.922428234792896 %)
[2026-01-09 16:15:02] 2026-01-09 15:14:14,543 | INFO     | sum of square deviations: 1088905998.0
[2026-01-09 16:15:02] 2026-01-09 15:14:14,544 | INFO     | sum of deviations: 3276214626.5
[2026-01-09 16:15:02] 2026-01-09 15:14:14,545 | INFO     | mean x: 1767966975.5
[2026-01-09 16:15:02] 2026-01-09 15:14:14,545 | INFO     | mean y: 2502474.2302631577
[2026-01-09 16:15:02] 2026-01-09 15:14:14,545 | INFO     | intersect: -5316817352.220052
[2026-01-09 16:15:02] 2026-01-09 15:14:14,546 | INFO     | chi2: 0.0006146581095523876
[2026-01-09 16:15:02] 2026-01-09 15:14:14,546 | INFO     | current chi2=0.0006146581095523876 (change=98.73077865069138 %)
[2026-01-09 16:15:02] 2026-01-09 15:14:14,546 | INFO     | sum of square deviations: 984941258.0
[2026-01-09 16:15:02] 2026-01-09 15:14:14,547 | INFO     | sum of deviations: 2522248557.0
[2026-01-09 16:15:02] 2026-01-09 15:14:14,547 | INFO     | mean x: 1767967128.0
[2026-01-09 16:15:02] 2026-01-09 15:14:14,548 | INFO     | mean y: 2503579.5034013605
[2026-01-09 16:15:02] 2026-01-09 15:14:14,548 | INFO     | intersect: -4524926357.258811
[2026-01-09 16:15:02] 2026-01-09 15:14:14,548 | INFO     | chi2: 0.0002715062376919598
[2026-01-09 16:15:02] 2026-01-09 15:14:14,548 | INFO     | current chi2=0.0002715062376919598 (change=55.82808825386218 %)
[2026-01-09 16:15:02] 2026-01-09 15:14:14,548 | INFO     | sum of square deviations: 887813855.5
[2026-01-09 16:15:02] 2026-01-09 15:14:14,549 | INFO     | sum of deviations: 1966445379.4999995
[2026-01-09 16:15:02] 2026-01-09 15:14:14,550 | INFO     | mean x: 1767967280.5
[2026-01-09 16:15:02] 2026-01-09 15:14:14,550 | INFO     | mean y: 2504451.176056338
[2026-01-09 16:15:02] 2026-01-09 15:14:14,550 | INFO     | intersect: -3913418991.9070015
[2026-01-09 16:15:02] 2026-01-09 15:14:14,550 | INFO     | chi2: 9.63116028038926e-05
[2026-01-09 16:15:02] 2026-01-09 15:14:14,550 | INFO     | current chi2=9.63116028038926e-05 (change=64.52692813887985 %)
[2026-01-09 16:15:02] 2026-01-09 15:14:14,551 | INFO     | sum of square deviations: 797291228.0
[2026-01-09 16:15:02] 2026-01-09 15:14:14,552 | INFO     | sum of deviations: 1626432629.9999995
[2026-01-09 16:15:02] 2026-01-09 15:14:14,552 | INFO     | mean x: 1767967433.0
[2026-01-09 16:15:02] 2026-01-09 15:14:14,552 | INFO     | mean y: 2505022.4452554747
[2026-01-09 16:15:02] 2026-01-09 15:14:14,552 | INFO     | intersect: -3604056571.1416464
[2026-01-09 16:15:02] 2026-01-09 15:14:14,552 | INFO     | chi2: 5.0331593390627016e-05
[2026-01-09 16:15:02] 2026-01-09 15:14:14,552 | INFO     | current chi2=5.0331593390627016e-05 (change=47.74088279569907 %)
[2026-01-09 16:15:02] 2026-01-09 15:14:14,553 | INFO     | sum of square deviations: 713140813.0
[2026-01-09 16:15:02] 2026-01-09 15:14:14,554 | INFO     | sum of deviations: 1405222901.0000002
[2026-01-09 16:15:02] 2026-01-09 15:14:14,554 | INFO     | mean x: 1767967585.5
[2026-01-09 16:15:02] 2026-01-09 15:14:14,554 | INFO     | mean y: 2505421.3636363638
[2026-01-09 16:15:02] 2026-01-09 15:14:14,554 | INFO     | intersect: -3481222468.110382
[2026-01-09 16:15:02] 2026-01-09 15:14:14,554 | INFO     | chi2: 3.9406568745829954e-05
[2026-01-09 16:15:02] 2026-01-09 15:14:14,554 | INFO     | current chi2=3.9406568745829954e-05 (change=21.70609732143225 %)
[2026-01-09 16:15:02] 2026-01-09 15:14:14,555 | INFO     | left removable region: 70
[2026-01-09 16:15:02] 2026-01-09 15:14:14,555 | INFO     | sum of square deviations: 233641590.0
[2026-01-09 16:15:02] 2026-01-09 15:14:14,555 | INFO     | sum of deviations: 408712870.99999994
[2026-01-09 16:15:02] 2026-01-09 15:14:14,556 | INFO     | mean x: 1767968470.0
[2026-01-09 16:15:02] 2026-01-09 15:14:14,556 | INFO     | mean y: 2507282.395604396
[2026-01-09 16:15:02] 2026-01-09 15:14:14,556 | INFO     | intersect: -3090227488.0327992
[2026-01-09 16:15:02] 2026-01-09 15:14:14,556 | INFO     | chi2: 2.8051200526509778e-05
[2026-01-09 16:15:02] 2026-01-09 15:14:14,556 | INFO     | current memory leak: 1.75 B/s (using 91 data points, chi2=0.00)
[2026-01-09 16:15:02] 2026-01-09 15:14:14,557 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-01-09 16:15:02] 2026-01-09 15:14:14,557 | INFO     | ..............................
[2026-01-09 16:15:02] 2026-01-09 15:14:14,557 | INFO     | . Timing measurements:
[2026-01-09 16:15:02] 2026-01-09 15:14:14,557 | INFO     | . get job = 0 s
[2026-01-09 16:15:02] 2026-01-09 15:14:14,557 | INFO     | . initial setup = 2 s
[2026-01-09 16:15:02] 2026-01-09 15:14:14,558 | INFO     | . payload setup = 7 s
[2026-01-09 16:15:02] 2026-01-09 15:14:14,558 | INFO     | . stage-in = 0 s
[2026-01-09 16:15:02] 2026-01-09 15:14:14,558 | INFO     | . payload execution = 10195 s
[2026-01-09 16:15:02] 2026-01-09 15:14:14,558 | INFO     | . stage-out = 1 s
[2026-01-09 16:15:02] 2026-01-09 15:14:14,558 | INFO     | . log creation = 0 s
[2026-01-09 16:15:02] 2026-01-09 15:14:14,558 | INFO     | ..............................
[2026-01-09 16:15:02] 2026-01-09 15:14:14,676 | INFO     | 
[2026-01-09 16:15:02] 2026-01-09 15:14:14,676 | INFO     | job summary report
[2026-01-09 16:15:02] 2026-01-09 15:14:14,677 | INFO     | --------------------------------------------------
[2026-01-09 16:15:02] 2026-01-09 15:14:14,677 | INFO     | PanDA job id: 6963161582
[2026-01-09 16:15:02] 2026-01-09 15:14:14,677 | INFO     | task id: 47898826
[2026-01-09 16:15:02] 2026-01-09 15:14:14,677 | INFO     | errors: (none)
[2026-01-09 16:15:02] 2026-01-09 15:14:14,677 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 16:15:02] 2026-01-09 15:14:14,677 | INFO     | pilot state: finished 
[2026-01-09 16:15:02] 2026-01-09 15:14:14,677 | INFO     | transexitcode: 0
[2026-01-09 16:15:02] 2026-01-09 15:14:14,677 | INFO     | exeerrorcode: 0
[2026-01-09 16:15:02] 2026-01-09 15:14:14,678 | INFO     | exeerrordiag: 
[2026-01-09 16:15:02] 2026-01-09 15:14:14,678 | INFO     | exitcode: 0
[2026-01-09 16:15:02] 2026-01-09 15:14:14,678 | INFO     | exitmsg: OK
[2026-01-09 16:15:02] 2026-01-09 15:14:14,678 | INFO     | cpuconsumptiontime: 76896 s
[2026-01-09 16:15:02] 2026-01-09 15:14:14,678 | INFO     | nevents: 400
[2026-01-09 16:15:02] 2026-01-09 15:14:14,678 | INFO     | neventsw: 0
[2026-01-09 16:15:02] 2026-01-09 15:14:14,678 | INFO     | pid: 686
[2026-01-09 16:15:02] 2026-01-09 15:14:14,678 | INFO     | pgrp: 686
[2026-01-09 16:15:02] 2026-01-09 15:14:14,678 | INFO     | corecount: 8
[2026-01-09 16:15:02] 2026-01-09 15:14:14,678 | INFO     | event service: False
[2026-01-09 16:15:02] 2026-01-09 15:14:14,679 | INFO     | sizes: {0: 2283970, 1: 2283970, 7: 2284260, 12: 2284288, 10206: 2312785, 10208: 2321783, 10210: 2321967, 10216: 2322225}
[2026-01-09 16:15:02] 2026-01-09 15:14:14,679 | INFO     | --------------------------------------------------
[2026-01-09 16:15:02] 2026-01-09 15:14:14,679 | INFO     | 
[2026-01-09 16:15:02] 2026-01-09 15:14:14,679 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-01-09 16:15:02] 2026-01-09 15:14:14,704 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 16:15:02] 2026-01-09 15:14:14,704 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 16:15:02] 2026-01-09 15:14:14,704 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 16:15:02] 2026-01-09 15:14:14,704 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 16:15:02] 2026-01-09 15:14:14,704 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 16:15:02] 2026-01-09 15:14:14,705 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 16:15:02] 2026-01-09 15:14:14,705 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 16:15:02] 2026-01-09 15:14:14,705 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 16:15:02] 2026-01-09 15:14:14,705 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 16:15:02] 2026-01-09 15:14:14,705 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 16:15:02] 2026-01-09 15:14:14,705 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 16:15:02] 2026-01-09 15:14:14,705 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 16:15:02] 2026-01-09 15:14:14,705 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 16:15:02] 2026-01-09 15:14:14,706 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 16:15:02] 2026-01-09 15:14:14,706 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 16:15:02] 2026-01-09 15:14:14,706 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 16:15:02] 2026-01-09 15:14:14,706 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 16:15:02] 2026-01-09 15:14:14,706 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 16:15:02] 2026-01-09 15:14:14,706 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 16:15:02] 2026-01-09 15:14:14,706 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 16:15:02] 2026-01-09 15:14:14,706 | INFO     | job 6963161582 has completed (purged errors)
[2026-01-09 16:15:02] 2026-01-09 15:14:14,707 | INFO     | overall cleanup function is called
[2026-01-09 16:15:02] 2026-01-09 15:14:15,715 | INFO     | --- collectZombieJob: --- 10, [686]
[2026-01-09 16:15:02] 2026-01-09 15:14:15,715 | INFO     | zombie collector waiting for pid 686
[2026-01-09 16:15:02] 2026-01-09 15:14:15,715 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 16:15:02] 2026-01-09 15:14:15,715 | INFO     | collected zombie processes
[2026-01-09 16:15:02] 2026-01-09 15:14:15,716 | INFO     | will attempt to kill all subprocesses of pid=686
[2026-01-09 16:15:02] 2026-01-09 15:14:15,778 | INFO     | process IDs to be killed: [686] (in reverse order)
[2026-01-09 16:15:02] 2026-01-09 15:14:15,829 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 16:15:02] 2026-01-09 15:14:15,830 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 16:15:02] 2026-01-09 15:14:15,832 | INFO     | did not find any defunct processes belonging to 686
[2026-01-09 16:15:02] 2026-01-09 15:14:15,834 | INFO     | did not find any defunct processes belonging to 686
[2026-01-09 16:15:02] 2026-01-09 15:14:15,834 | INFO     | ready for new job
[2026-01-09 16:15:02] 2026-01-09 15:14:15,834 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 16:15:02] 2026-01-09 15:14:15,836 | INFO     | ***************************************
[2026-01-09 16:15:02] 2026-01-09 15:14:15,836 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 16:15:02] 2026-01-09 15:14:15,836 | INFO     | ***************************************
[2026-01-09 16:15:02] 2026-01-09 15:14:15,836 | INFO     | 
[2026-01-09 16:15:02] 2026-01-09 15:14:15,837 | INFO     | pilot is running in a VM
[2026-01-09 16:15:02] 2026-01-09 15:14:15,837 | INFO     | architecture information:
[2026-01-09 16:15:02] 2026-01-09 15:14:15,838 | INFO     | executing command: cat /etc/os-release
[2026-01-09 16:15:02] 2026-01-09 15:14:15,856 | INFO     | cat /etc/os-release:
[2026-01-09 16:15:02] NAME="CentOS Linux"
[2026-01-09 16:15:02] VERSION="7 (Core)"
[2026-01-09 16:15:02] ID="centos"
[2026-01-09 16:15:02] ID_LIKE="rhel fedora"
[2026-01-09 16:15:02] VERSION_ID="7"
[2026-01-09 16:15:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 16:15:02] ANSI_COLOR="0;31"
[2026-01-09 16:15:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 16:15:02] HOME_URL="https://www.centos.org/"
[2026-01-09 16:15:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 16:15:02] 
[2026-01-09 16:15:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 16:15:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 16:15:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 16:15:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 16:15:02] 
[2026-01-09 16:15:02] 2026-01-09 15:14:15,856 | INFO     | ***************************************
[2026-01-09 16:15:02] 2026-01-09 15:14:16,359 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-01-09 16:15:02] 2026-01-09 15:14:16,382 | INFO     | sufficient remaining disk space (498116591616 B)
[2026-01-09 16:15:02] 2026-01-09 15:14:16,382 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 16:15:02] 2026-01-09 15:14:16,383 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 16:15:02] 2026-01-09 15:14:16,383 | INFO     | update_server=False
[2026-01-09 16:15:02] 2026-01-09 15:14:16,383 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 16:15:02] 2026-01-09 15:14:16,383 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 16:15:02] 2026-01-09 15:14:16,596 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 16:15:02] 2026-01-09 15:14:16,596 | INFO     | aborting loop
[2026-01-09 16:15:02] 2026-01-09 15:14:16,639 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 16:15:02] 2026-01-09 15:14:16,761 | INFO     | all data control threads have been joined
[2026-01-09 16:15:02] 2026-01-09 15:14:17,064 | INFO     | all job control threads have been joined
[2026-01-09 16:15:02] 2026-01-09 15:14:17,384 | INFO     | [job] queue monitor thread has finished
[2026-01-09 16:15:02] 2026-01-09 15:14:17,386 | INFO     | [job] retrieve thread has finished
[2026-01-09 16:15:02] 2026-01-09 15:14:17,489 | INFO     | all payload control threads have been joined
[2026-01-09 16:15:02] 2026-01-09 15:14:17,551 | INFO     | [job] validate thread has finished
[2026-01-09 16:15:02] 2026-01-09 15:14:17,602 | INFO     | [job] job monitor thread has finished
[2026-01-09 16:15:02] 2026-01-09 15:14:17,691 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 16:15:02] 2026-01-09 15:14:17,767 | INFO     | [data] control thread has finished
[2026-01-09 16:15:02] 2026-01-09 15:14:17,800 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 16:15:02] 2026-01-09 15:14:18,070 | INFO     | [job] control thread has finished
[2026-01-09 16:15:02] 2026-01-09 15:14:18,117 | INFO     | [data] copytool_in thread has finished
[2026-01-09 16:15:02] 2026-01-09 15:14:18,406 | INFO     | [payload] failed_post thread has finished
[2026-01-09 16:15:02] 2026-01-09 15:14:18,495 | INFO     | [payload] control thread has finished
[2026-01-09 16:15:02] 2026-01-09 15:14:18,618 | INFO     | [payload] validate_post thread has finished
[2026-01-09 16:15:02] 2026-01-09 15:14:18,645 | INFO     | [data] copytool_out thread has finished
[2026-01-09 16:15:02] 2026-01-09 15:14:18,767 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 16:15:02] 2026-01-09 15:14:19,084 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 16:15:02] 2026-01-09 15:14:23,091 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 16:15:02] 2026-01-09 15:14:26,599 | INFO     | job.realtimelogging is not enabled
[2026-01-09 16:15:02] 2026-01-09 15:14:27,601 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 16:15:02] 2026-01-09 15:14:46,216 | INFO     | PID=26660 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 16:15:02] 2026-01-09 15:14:46,216 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 16:15:02] 2026-01-09 15:14:46,216 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 16:15:02] 2026-01-09 15:14:46,216 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 16:15:02] 2026-01-09 15:14:56,466 | INFO     | [monitor] cgroup control has ended
[2026-01-09 16:15:02] 2026-01-09 15:14:56,989 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140458409953088)>', '<ExcThread(monitor, started 140457812145920)>']
[2026-01-09 16:15:02] 2026-01-09 15:14:57,278 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 16:15:02] 2026-01-09 15:14:57,279 | INFO     | [monitor] control thread has ended
[2026-01-09 16:15:02] 2026-01-09 15:15:01,994 | INFO     | all workflow threads have been joined
[2026-01-09 16:15:02] 2026-01-09 15:15:01,994 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 16:15:02] 2026-01-09 15:15:01,994 | INFO     | traces error code: 0
[2026-01-09 16:15:02] 2026-01-09 15:15:01,994 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 16:15:02] 2026-01-09 15:15:02,276 [wrapper] ==== pilot stdout END ====
[2026-01-09 16:15:02] 2026-01-09 15:15:02,280 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 16:15:02] 2026-01-09 15:15:02,284 [wrapper] pilotpid: 26660
[2026-01-09 16:15:02] 2026-01-09 15:15:02,288 [wrapper] Pilot exit status: 0
[2026-01-09 16:15:02] 2026-01-09 15:15:02,309 [wrapper] pandaids: 6963161582
[2026-01-09 16:15:02] 2026-01-09 15:15:02,391 [wrapper] cleanup supervisor_pilot 17826 26661
[2026-01-09 16:15:02] 2026-01-09 15:15:02,399 [wrapper] Test setup, not cleaning
[2026-01-09 16:15:02] 2026-01-09 15:15:02,402 [wrapper] apfmon messages muted
[2026-01-09 16:15:02] 2026-01-09 15:15:02,406 [wrapper] ==== wrapper stdout END ====
[2026-01-09 16:15:02] 2026-01-09 15:15:02,410 [wrapper] ==== wrapper stderr END ====
[2026-01-09 16:15:02]  *** Error codes and diagnostics ***
[2026-01-09 16:15:02]     "exeErrorCode": 0,
[2026-01-09 16:15:02]     "exeErrorDiag": "",
[2026-01-09 16:15:02]     "pilotErrorCode": 0,
[2026-01-09 16:15:02]     "pilotErrorDiag": "",
[2026-01-09 16:15:02]  *** Listing of results directory ***
[2026-01-09 16:15:02] total 439272
[2026-01-09 16:15:02] -rw-r--r--. 1 boinc boinc    579449 Jan  8 22:44 pilot3.tar.gz
[2026-01-09 16:15:02] -rwx------. 1 boinc boinc     36322 Jan  8 22:46 runpilot2-wrapper.sh
[2026-01-09 16:15:02] -rw-r--r--. 1 boinc boinc      5112 Jan  8 22:47 queuedata.json
[2026-01-09 16:15:02] -rw-r--r--. 1 boinc boinc       100 Jan  9 13:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 16:15:02] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 13:23 run_atlas
[2026-01-09 16:15:02] -rw-r--r--. 1 boinc boinc       105 Jan  9 13:23 job.xml
[2026-01-09 16:15:02] -rw-r--r--. 1 boinc boinc      6390 Jan  9 13:23 init_data.xml
[2026-01-09 16:15:02] -rw-r--r--. 2 boinc boinc 223024405 Jan  9 13:23 EVNT.47898824._001285.pool.root.1
[2026-01-09 16:15:02] -rw-r--r--. 2 boinc boinc     15847 Jan  9 13:23 start_atlas.sh
[2026-01-09 16:15:02] drwxrwx--x. 2 boinc boinc        68 Jan  9 13:23 shared
[2026-01-09 16:15:02] -rw-r--r--. 2 boinc boinc    592395 Jan  9 13:23 input.tar.gz
[2026-01-09 16:15:02] -rw-r--r--. 1 boinc boinc         0 Jan  9 13:23 boinc_lockfile
[2026-01-09 16:15:02] -rw-r--r--. 1 boinc boinc      2519 Jan  9 13:23 pandaJob.out
[2026-01-09 16:15:02] -rw-------. 1 boinc boinc    989377 Jan  9 13:23 agis_schedconf.cvmfs.json
[2026-01-09 16:15:02] -rw-------. 1 boinc boinc   1516240 Jan  9 13:23 agis_ddmendpoints.agis.ALL.json
[2026-01-09 16:15:02] drwx------. 5 boinc boinc      4096 Jan  9 13:23 pilot3
[2026-01-09 16:15:02] -rw-------. 1 boinc boinc 219317900 Jan  9 16:13 HITS.47898826._033244.pool.root.1
[2026-01-09 16:15:02] -rw-r--r--. 1 boinc boinc       531 Jan  9 16:13 boinc_task_state.xml
[2026-01-09 16:15:02] -rw-------. 1 boinc boinc        95 Jan  9 16:13 pilot_heartbeat.json
[2026-01-09 16:15:02] -rw-------. 1 boinc boinc      1010 Jan  9 16:14 memory_monitor_summary.json
[2026-01-09 16:15:02] -rw-------. 1 boinc boinc    410304 Jan  9 16:14 log.47898826._033244.job.log.tgz.1
[2026-01-09 16:15:02] -rw-------. 1 boinc boinc      7772 Jan  9 16:14 heartbeat.json
[2026-01-09 16:15:02] -rw-r--r--. 1 boinc boinc      8192 Jan  9 16:14 boinc_mmap_file
[2026-01-09 16:15:02] -rw-r--r--. 1 boinc boinc        28 Jan  9 16:14 wrapper_checkpoint.txt
[2026-01-09 16:15:02] -rw-------. 1 boinc boinc      4881 Jan  9 16:15 pilotlog.txt
[2026-01-09 16:15:02] -rw-------. 1 boinc boinc   1377654 Jan  9 16:15 log.47898826._033244.job.log.1
[2026-01-09 16:15:02] -rw-------. 1 boinc boinc       357 Jan  9 16:15 output.list
[2026-01-09 16:15:02] -rw-r--r--. 1 boinc boinc       620 Jan  9 16:15 runtime_log
[2026-01-09 16:15:02] -rw-------. 1 boinc boinc   1802240 Jan  9 16:15 result.tar.gz
[2026-01-09 16:15:02] -rw-r--r--. 1 boinc boinc      8817 Jan  9 16:15 runtime_log.err
[2026-01-09 16:15:02] -rw-------. 1 boinc boinc       655 Jan  9 16:15 oD8KDmG1Cy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm1UlKDmzTEpSm.diag
[2026-01-09 16:15:02] -rw-r--r--. 1 boinc boinc     20626 Jan  9 16:15 stderr.txt
[2026-01-09 16:15:02] HITS file was successfully produced:
[2026-01-09 16:15:02] -rw-------. 1 boinc boinc 219317900 Jan  9 16:13 shared/HITS.pool.root.1
[2026-01-09 16:15:02]  *** Contents of shared directory: ***
[2026-01-09 16:15:02] total 434336
[2026-01-09 16:15:02] -rw-r--r--. 2 boinc boinc 223024405 Jan  9 13:23 ATLAS.root_0
[2026-01-09 16:15:02] -rw-r--r--. 2 boinc boinc     15847 Jan  9 13:23 start_atlas.sh
[2026-01-09 16:15:02] -rw-r--r--. 2 boinc boinc    592395 Jan  9 13:23 input.tar.gz
[2026-01-09 16:15:02] -rw-------. 1 boinc boinc 219317900 Jan  9 16:13 HITS.pool.root.1
[2026-01-09 16:15:02] -rw-------. 1 boinc boinc   1802240 Jan  9 16:15 result.tar.gz
16:15:04 (22937): run_atlas exited; CPU time 76967.366353
16:15:04 (22937): called boinc_finish(0)

</stderr_txt>
]]>

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