Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:37:30 (17501): wrapper (7.7.26015): starting
13:37:30 (17501): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 13:37:30] Arguments: --nthreads 8
[2026-01-09 13:37:30] Threads: 8
[2026-01-09 13:37:30] Checking for CVMFS
[2026-01-09 13:37:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 13:37:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 13:37:30] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 13:37:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 13:37:30] 2.11.2.0 5643 35407 101156 154942 3 57 19608684 25165825 0 130560 0 8303895 99.738 8515457 3070 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 13:37:30] CVMFS is ok
[2026-01-09 13:37:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 13:37:30] Checking for apptainer binary...
[2026-01-09 13:37:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 13:37:30] Running /usr/bin/apptainer --version
[2026-01-09 13:37:30] apptainer version 1.3.2-1.el7
[2026-01-09 13:37:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 13:37:32] cg-vwn380.simple-grid.lan
[2026-01-09 13:37:32] apptainer works
[2026-01-09 13:37:32] Set ATHENA_PROC_NUMBER=8
[2026-01-09 13:37:32] Set ATHENA_CORE_NUMBER=8
[2026-01-09 13:37:32] Starting ATLAS job with PandaID=6963157122
[2026-01-09 13:37:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 16:28:09]  *** The last 200 lines of the pilot log: ***
[2026-01-09 16:28:09] 2026-01-09 15:27:02,140 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 16:28:09] 2026-01-09 15:27:02,507 | INFO     | time since job start (10156s) is within the limit (349056.0s)
[2026-01-09 16:28:09] 2026-01-09 15:27:03,720 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 16:28:09] 2026-01-09 15:27:03,721 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 16:28:09] 2026-01-09 15:27:03,723 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6963157122/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 16:28:09] 2026-01-09 15:27:03,724 | INFO     | extracted standard info from prmon json
[2026-01-09 16:28:09] 2026-01-09 15:27:03,724 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 16:28:09] 2026-01-09 15:27:03,724 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 16:28:09] 2026-01-09 15:27:03,724 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 16:28:09] 2026-01-09 15:27:03,724 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 16:28:09] 2026-01-09 15:27:03,728 | INFO     | fitting pss+swap vs Time
[2026-01-09 16:28:09] 2026-01-09 15:27:03,729 | INFO     | sum of square deviations: 1418361477.5
[2026-01-09 16:28:09] 2026-01-09 15:27:03,730 | INFO     | sum of deviations: 29465030110.500004
[2026-01-09 16:28:09] 2026-01-09 15:27:03,730 | INFO     | mean x: 1767967329.5
[2026-01-09 16:28:09] 2026-01-09 15:27:03,730 | INFO     | mean y: 2471059.765060241
[2026-01-09 16:28:09] 2026-01-09 15:27:03,731 | INFO     | intersect: -36725268253.852745
[2026-01-09 16:28:09] 2026-01-09 15:27:03,731 | INFO     | chi2: 1.5424501147889376
[2026-01-09 16:28:09] 2026-01-09 15:27:03,731 | INFO     | sum of square deviations: 1294014960.0
[2026-01-09 16:28:09] 2026-01-09 15:27:03,732 | INFO     | sum of deviations: 28389106834.000004
[2026-01-09 16:28:09] 2026-01-09 15:27:03,733 | INFO     | mean x: 1767967177.0
[2026-01-09 16:28:09] 2026-01-09 15:27:03,733 | INFO     | mean y: 2469739.8757763975
[2026-01-09 16:28:09] 2026-01-09 15:27:03,733 | INFO     | intersect: -38784569528.0925
[2026-01-09 16:28:09] 2026-01-09 15:27:03,733 | INFO     | chi2: 1.5434475467816586
[2026-01-09 16:28:09] 2026-01-09 15:27:03,733 | INFO     | current chi2=1.5434475467816586 (change=-0.06466542957582454 %)
[2026-01-09 16:28:09] 2026-01-09 15:27:03,734 | INFO     | right removable region: 160
[2026-01-09 16:28:09] 2026-01-09 15:27:03,734 | INFO     | sum of square deviations: 1294014960.0
[2026-01-09 16:28:09] 2026-01-09 15:27:03,735 | INFO     | sum of deviations: 2799441463.0000005
[2026-01-09 16:28:09] 2026-01-09 15:27:03,735 | INFO     | mean x: 1767967482.0
[2026-01-09 16:28:09] 2026-01-09 15:27:03,735 | INFO     | mean y: 2503387.5403726706
[2026-01-09 16:28:09] 2026-01-09 15:27:03,736 | INFO     | intersect: -3822275789.932588
[2026-01-09 16:28:09] 2026-01-09 15:27:03,736 | INFO     | chi2: 0.07721182995844024
[2026-01-09 16:28:09] 2026-01-09 15:27:03,736 | INFO     | current chi2=0.07721182995844024 (change=94.99420893952181 %)
[2026-01-09 16:28:09] 2026-01-09 15:27:03,737 | INFO     | sum of square deviations: 1177156955.0
[2026-01-09 16:28:09] 2026-01-09 15:27:03,738 | INFO     | sum of deviations: -3453732770.0
[2026-01-09 16:28:09] 2026-01-09 15:27:03,738 | INFO     | mean x: 1767967634.5
[2026-01-09 16:28:09] 2026-01-09 15:27:03,738 | INFO     | mean y: 2511502.628205128
[2026-01-09 16:28:09] 2026-01-09 15:27:03,738 | INFO     | intersect: 5189659851.568667
[2026-01-09 16:28:09] 2026-01-09 15:27:03,738 | INFO     | chi2: 0.011973757980983274
[2026-01-09 16:28:09] 2026-01-09 15:27:03,739 | INFO     | current chi2=0.011973757980983274 (change=84.49232716356 %)
[2026-01-09 16:28:09] 2026-01-09 15:27:03,739 | INFO     | sum of square deviations: 1067554900.0
[2026-01-09 16:28:09] 2026-01-09 15:27:03,740 | INFO     | sum of deviations: -3225960783.0000005
[2026-01-09 16:28:09] 2026-01-09 15:27:03,740 | INFO     | mean x: 1767967787.0
[2026-01-09 16:28:09] 2026-01-09 15:27:03,740 | INFO     | mean y: 2511177.7086092713
[2026-01-09 16:28:09] 2026-01-09 15:27:03,740 | INFO     | intersect: 5344994966.101411
[2026-01-09 16:28:09] 2026-01-09 15:27:03,741 | INFO     | chi2: 0.011807950178229401
[2026-01-09 16:28:09] 2026-01-09 15:27:03,741 | INFO     | current chi2=0.011807950178229401 (change=1.3847599309858152 %)
[2026-01-09 16:28:09] 2026-01-09 15:27:03,741 | INFO     | left removable region: 30
[2026-01-09 16:28:09] 2026-01-09 15:27:03,741 | INFO     | sum of square deviations: 681212772.5
[2026-01-09 16:28:09] 2026-01-09 15:27:03,742 | INFO     | sum of deviations: 393890511.4999998
[2026-01-09 16:28:09] 2026-01-09 15:27:03,742 | INFO     | mean x: 1767968061.5
[2026-01-09 16:28:09] 2026-01-09 15:27:03,742 | INFO     | mean y: 2504621.053846154
[2026-01-09 16:28:09] 2026-01-09 15:27:03,742 | INFO     | intersect: -1019768994.7273351
[2026-01-09 16:28:09] 2026-01-09 15:27:03,743 | INFO     | chi2: 0.004951992270761617
[2026-01-09 16:28:09] 2026-01-09 15:27:03,743 | INFO     | current memory leak: 0.58 B/s (using 130 data points, chi2=0.00)
[2026-01-09 16:28:09] 2026-01-09 15:27:03,743 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-01-09 16:28:09] 2026-01-09 15:27:03,744 | INFO     | ..............................
[2026-01-09 16:28:09] 2026-01-09 15:27:03,744 | INFO     | . Timing measurements:
[2026-01-09 16:28:09] 2026-01-09 15:27:03,744 | INFO     | . get job = 0 s
[2026-01-09 16:28:09] 2026-01-09 15:27:03,744 | INFO     | . initial setup = 1 s
[2026-01-09 16:28:09] 2026-01-09 15:27:03,744 | INFO     | . payload setup = 7 s
[2026-01-09 16:28:09] 2026-01-09 15:27:03,744 | INFO     | . stage-in = 0 s
[2026-01-09 16:28:09] 2026-01-09 15:27:03,744 | INFO     | . payload execution = 10121 s
[2026-01-09 16:28:09] 2026-01-09 15:27:03,744 | INFO     | . stage-out = 0 s
[2026-01-09 16:28:09] 2026-01-09 15:27:03,745 | INFO     | . log creation = 0 s
[2026-01-09 16:28:09] 2026-01-09 15:27:03,745 | INFO     | ..............................
[2026-01-09 16:28:09] 2026-01-09 15:27:03,888 | INFO     | 
[2026-01-09 16:28:09] 2026-01-09 15:27:03,888 | INFO     | job summary report
[2026-01-09 16:28:09] 2026-01-09 15:27:03,888 | INFO     | --------------------------------------------------
[2026-01-09 16:28:09] 2026-01-09 15:27:03,888 | INFO     | PanDA job id: 6963157122
[2026-01-09 16:28:09] 2026-01-09 15:27:03,889 | INFO     | task id: 47898826
[2026-01-09 16:28:09] 2026-01-09 15:27:03,889 | INFO     | errors: (none)
[2026-01-09 16:28:09] 2026-01-09 15:27:03,889 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 16:28:09] 2026-01-09 15:27:03,889 | INFO     | pilot state: finished 
[2026-01-09 16:28:09] 2026-01-09 15:27:03,889 | INFO     | transexitcode: 0
[2026-01-09 16:28:09] 2026-01-09 15:27:03,889 | INFO     | exeerrorcode: 0
[2026-01-09 16:28:09] 2026-01-09 15:27:03,889 | INFO     | exeerrordiag: 
[2026-01-09 16:28:09] 2026-01-09 15:27:03,889 | INFO     | exitcode: 0
[2026-01-09 16:28:09] 2026-01-09 15:27:03,889 | INFO     | exitmsg: OK
[2026-01-09 16:28:09] 2026-01-09 15:27:03,889 | INFO     | cpuconsumptiontime: 75646 s
[2026-01-09 16:28:09] 2026-01-09 15:27:03,890 | INFO     | nevents: 400
[2026-01-09 16:28:09] 2026-01-09 15:27:03,890 | INFO     | neventsw: 0
[2026-01-09 16:28:09] 2026-01-09 15:27:03,890 | INFO     | pid: 27648
[2026-01-09 16:28:09] 2026-01-09 15:27:03,890 | INFO     | pgrp: 27648
[2026-01-09 16:28:09] 2026-01-09 15:27:03,890 | INFO     | corecount: 8
[2026-01-09 16:28:09] 2026-01-09 15:27:03,890 | INFO     | event service: False
[2026-01-09 16:28:09] 2026-01-09 15:27:03,890 | INFO     | sizes: {0: 2283798, 1: 2283997, 5: 2284259, 12: 2284315, 10132: 2312717, 10133: 2321715, 10136: 2321899, 10141: 2322185}
[2026-01-09 16:28:09] 2026-01-09 15:27:03,890 | INFO     | --------------------------------------------------
[2026-01-09 16:28:09] 2026-01-09 15:27:03,890 | INFO     | 
[2026-01-09 16:28:09] 2026-01-09 15:27:03,891 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-01-09 16:28:09] 2026-01-09 15:27:03,912 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 16:28:09] 2026-01-09 15:27:03,913 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 16:28:09] 2026-01-09 15:27:03,913 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 16:28:09] 2026-01-09 15:27:03,913 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 16:28:09] 2026-01-09 15:27:03,913 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 16:28:09] 2026-01-09 15:27:03,913 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 16:28:09] 2026-01-09 15:27:03,913 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 16:28:09] 2026-01-09 15:27:03,913 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 16:28:09] 2026-01-09 15:27:03,914 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 16:28:09] 2026-01-09 15:27:03,914 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 16:28:09] 2026-01-09 15:27:03,914 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 16:28:09] 2026-01-09 15:27:03,914 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 16:28:09] 2026-01-09 15:27:03,914 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 16:28:09] 2026-01-09 15:27:03,914 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 16:28:09] 2026-01-09 15:27:03,914 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 16:28:09] 2026-01-09 15:27:03,914 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 16:28:09] 2026-01-09 15:27:03,914 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 16:28:09] 2026-01-09 15:27:03,915 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 16:28:09] 2026-01-09 15:27:03,915 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 16:28:09] 2026-01-09 15:27:03,915 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 16:28:09] 2026-01-09 15:27:03,915 | INFO     | job 6963157122 has completed (purged errors)
[2026-01-09 16:28:09] 2026-01-09 15:27:03,915 | INFO     | overall cleanup function is called
[2026-01-09 16:28:09] 2026-01-09 15:27:04,923 | INFO     | --- collectZombieJob: --- 10, [27648]
[2026-01-09 16:28:09] 2026-01-09 15:27:04,924 | INFO     | zombie collector waiting for pid 27648
[2026-01-09 16:28:09] 2026-01-09 15:27:04,924 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 16:28:09] 2026-01-09 15:27:04,924 | INFO     | collected zombie processes
[2026-01-09 16:28:09] 2026-01-09 15:27:04,924 | INFO     | will attempt to kill all subprocesses of pid=27648
[2026-01-09 16:28:09] 2026-01-09 15:27:04,999 | INFO     | process IDs to be killed: [27648] (in reverse order)
[2026-01-09 16:28:09] 2026-01-09 15:27:05,045 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 16:28:09] 2026-01-09 15:27:05,045 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 16:28:09] 2026-01-09 15:27:05,047 | INFO     | did not find any defunct processes belonging to 27648
[2026-01-09 16:28:09] 2026-01-09 15:27:05,049 | INFO     | did not find any defunct processes belonging to 27648
[2026-01-09 16:28:09] 2026-01-09 15:27:05,049 | INFO     | ready for new job
[2026-01-09 16:28:09] 2026-01-09 15:27:05,049 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 16:28:09] 2026-01-09 15:27:05,051 | INFO     | ***************************************
[2026-01-09 16:28:09] 2026-01-09 15:27:05,051 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 16:28:09] 2026-01-09 15:27:05,051 | INFO     | ***************************************
[2026-01-09 16:28:09] 2026-01-09 15:27:05,052 | INFO     | 
[2026-01-09 16:28:09] 2026-01-09 15:27:05,052 | INFO     | pilot is running in a VM
[2026-01-09 16:28:09] 2026-01-09 15:27:05,052 | INFO     | architecture information:
[2026-01-09 16:28:09] 2026-01-09 15:27:05,053 | INFO     | executing command: cat /etc/os-release
[2026-01-09 16:28:09] 2026-01-09 15:27:05,069 | INFO     | cat /etc/os-release:
[2026-01-09 16:28:09] NAME="CentOS Linux"
[2026-01-09 16:28:09] VERSION="7 (Core)"
[2026-01-09 16:28:09] ID="centos"
[2026-01-09 16:28:09] ID_LIKE="rhel fedora"
[2026-01-09 16:28:09] VERSION_ID="7"
[2026-01-09 16:28:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 16:28:09] ANSI_COLOR="0;31"
[2026-01-09 16:28:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 16:28:09] HOME_URL="https://www.centos.org/"
[2026-01-09 16:28:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 16:28:09] 
[2026-01-09 16:28:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 16:28:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 16:28:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 16:28:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 16:28:09] 
[2026-01-09 16:28:09] 2026-01-09 15:27:05,069 | INFO     | ***************************************
[2026-01-09 16:28:09] 2026-01-09 15:27:05,573 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-01-09 16:28:09] 2026-01-09 15:27:05,590 | INFO     | sufficient remaining disk space (498120785920 B)
[2026-01-09 16:28:09] 2026-01-09 15:27:05,590 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 16:28:09] 2026-01-09 15:27:05,591 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 16:28:09] 2026-01-09 15:27:05,591 | INFO     | update_server=False
[2026-01-09 16:28:09] 2026-01-09 15:27:05,591 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 16:28:09] 2026-01-09 15:27:05,591 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 16:28:09] 2026-01-09 15:27:05,591 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 16:28:09] 2026-01-09 15:27:05,649 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 16:28:09] 2026-01-09 15:27:05,649 | INFO     | aborting loop
[2026-01-09 16:28:09] 2026-01-09 15:27:05,935 | INFO     | all data control threads have been joined
[2026-01-09 16:28:09] 2026-01-09 15:27:06,156 | INFO     | all job control threads have been joined
[2026-01-09 16:28:09] 2026-01-09 15:27:06,441 | INFO     | all payload control threads have been joined
[2026-01-09 16:28:09] 2026-01-09 15:27:06,596 | INFO     | [job] retrieve thread has finished
[2026-01-09 16:28:09] 2026-01-09 15:27:06,597 | INFO     | [job] queue monitor thread has finished
[2026-01-09 16:28:09] 2026-01-09 15:27:06,655 | INFO     | [job] job monitor thread has finished
[2026-01-09 16:28:09] 2026-01-09 15:27:06,775 | INFO     | [data] copytool_in thread has finished
[2026-01-09 16:28:09] 2026-01-09 15:27:06,884 | INFO     | [job] validate thread has finished
[2026-01-09 16:28:09] 2026-01-09 15:27:06,941 | INFO     | [data] control thread has finished
[2026-01-09 16:28:09] 2026-01-09 15:27:06,975 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 16:28:09] 2026-01-09 15:27:07,162 | INFO     | [job] control thread has finished
[2026-01-09 16:28:09] 2026-01-09 15:27:07,446 | INFO     | [payload] control thread has finished
[2026-01-09 16:28:09] 2026-01-09 15:27:07,515 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 16:28:09] 2026-01-09 15:27:07,601 | INFO     | [payload] validate_post thread has finished
[2026-01-09 16:28:09] 2026-01-09 15:27:07,679 | INFO     | [payload] failed_post thread has finished
[2026-01-09 16:28:09] 2026-01-09 15:27:07,702 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 16:28:09] 2026-01-09 15:27:07,705 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 16:28:09] 2026-01-09 15:27:07,747 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 16:28:09] 2026-01-09 15:27:08,981 | INFO     | [data] copytool_out thread has finished
[2026-01-09 16:28:09] 2026-01-09 15:27:09,598 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 16:28:09] 2026-01-09 15:27:35,600 | INFO     | PID=21218 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 16:28:09] 2026-01-09 15:27:35,600 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 16:28:09] 2026-01-09 15:27:35,600 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 16:28:09] 2026-01-09 15:27:35,600 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 16:28:09] 2026-01-09 15:28:02,381 | INFO     | [monitor] cgroup control has ended
[2026-01-09 16:28:09] 2026-01-09 15:28:04,197 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139816483403584)>', '<ExcThread(monitor, started 139815597102848)>']
[2026-01-09 16:28:09] 2026-01-09 15:28:04,736 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 16:28:09] 2026-01-09 15:28:04,737 | INFO     | [monitor] control thread has ended
[2026-01-09 16:28:09] 2026-01-09 15:28:09,223 | INFO     | all workflow threads have been joined
[2026-01-09 16:28:09] 2026-01-09 15:28:09,223 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 16:28:09] 2026-01-09 15:28:09,223 | INFO     | traces error code: 0
[2026-01-09 16:28:09] 2026-01-09 15:28:09,224 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 16:28:09] 2026-01-09 15:28:09,369 [wrapper] ==== pilot stdout END ====
[2026-01-09 16:28:09] 2026-01-09 15:28:09,374 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 16:28:09] 2026-01-09 15:28:09,378 [wrapper] pilotpid: 21218
[2026-01-09 16:28:09] 2026-01-09 15:28:09,382 [wrapper] Pilot exit status: 0
[2026-01-09 16:28:09] 2026-01-09 15:28:09,405 [wrapper] pandaids: 6963157122
[2026-01-09 16:28:09] 2026-01-09 15:28:09,452 [wrapper] cleanup supervisor_pilot 14175 21219
[2026-01-09 16:28:09] 2026-01-09 15:28:09,458 [wrapper] Test setup, not cleaning
[2026-01-09 16:28:09] 2026-01-09 15:28:09,465 [wrapper] apfmon messages muted
[2026-01-09 16:28:09] 2026-01-09 15:28:09,468 [wrapper] ==== wrapper stdout END ====
[2026-01-09 16:28:09] 2026-01-09 15:28:09,472 [wrapper] ==== wrapper stderr END ====
[2026-01-09 16:28:09]  *** Error codes and diagnostics ***
[2026-01-09 16:28:09]     "exeErrorCode": 0,
[2026-01-09 16:28:09]     "exeErrorDiag": "",
[2026-01-09 16:28:09]     "pilotErrorCode": 0,
[2026-01-09 16:28:09]     "pilotErrorDiag": "",
[2026-01-09 16:28:09]  *** Listing of results directory ***
[2026-01-09 16:28:09] total 440008
[2026-01-09 16:28:09] -rwx------. 1 boinc boinc     36322 Jan  8 22:44 runpilot2-wrapper.sh
[2026-01-09 16:28:09] -rw-r--r--. 1 boinc boinc      5112 Jan  8 22:44 queuedata.json
[2026-01-09 16:28:09] -rw-r--r--. 1 boinc boinc    579449 Jan  8 22:44 pilot3.tar.gz
[2026-01-09 16:28:09] -rw-r--r--. 1 boinc boinc       100 Jan  9 13:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 16:28:09] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 13:37 run_atlas
[2026-01-09 16:28:09] -rw-r--r--. 1 boinc boinc       105 Jan  9 13:37 job.xml
[2026-01-09 16:28:09] -rw-r--r--. 1 boinc boinc      6390 Jan  9 13:37 init_data.xml
[2026-01-09 16:28:09] -rw-r--r--. 2 boinc boinc 224716275 Jan  9 13:37 EVNT.47898824._001246.pool.root.1
[2026-01-09 16:28:09] -rw-r--r--. 2 boinc boinc     15847 Jan  9 13:37 start_atlas.sh
[2026-01-09 16:28:09] drwxrwx--x. 2 boinc boinc        68 Jan  9 13:37 shared
[2026-01-09 16:28:09] -rw-r--r--. 2 boinc boinc    592393 Jan  9 13:37 input.tar.gz
[2026-01-09 16:28:09] -rw-r--r--. 1 boinc boinc         0 Jan  9 13:37 boinc_lockfile
[2026-01-09 16:28:09] -rw-r--r--. 1 boinc boinc      2519 Jan  9 13:37 pandaJob.out
[2026-01-09 16:28:09] -rw-------. 1 boinc boinc    989377 Jan  9 13:37 agis_schedconf.cvmfs.json
[2026-01-09 16:28:09] -rw-------. 1 boinc boinc   1516240 Jan  9 13:37 agis_ddmendpoints.agis.ALL.json
[2026-01-09 16:28:09] drwx------. 5 boinc boinc      4096 Jan  9 13:37 pilot3
[2026-01-09 16:28:09] -rw-------. 1 boinc boinc 218444097 Jan  9 16:26 HITS.47898826._032251.pool.root.1
[2026-01-09 16:28:09] -rw-r--r--. 1 boinc boinc       531 Jan  9 16:26 boinc_task_state.xml
[2026-01-09 16:28:09] -rw-------. 1 boinc boinc      1016 Jan  9 16:26 memory_monitor_summary.json
[2026-01-09 16:28:09] -rw-------. 1 boinc boinc        95 Jan  9 16:26 pilot_heartbeat.json
[2026-01-09 16:28:09] -rw-------. 1 boinc boinc    386150 Jan  9 16:26 log.47898826._032251.job.log.tgz.1
[2026-01-09 16:28:09] -rw-------. 1 boinc boinc      7774 Jan  9 16:27 heartbeat.json
[2026-01-09 16:28:09] -rw-r--r--. 1 boinc boinc        28 Jan  9 16:28 wrapper_checkpoint.txt
[2026-01-09 16:28:09] -rw-r--r--. 1 boinc boinc      8192 Jan  9 16:28 boinc_mmap_file
[2026-01-09 16:28:09] -rw-------. 1 boinc boinc      4809 Jan  9 16:28 pilotlog.txt
[2026-01-09 16:28:09] -rw-------. 1 boinc boinc   1365984 Jan  9 16:28 log.47898826._032251.job.log.1
[2026-01-09 16:28:09] -rw-------. 1 boinc boinc       357 Jan  9 16:28 output.list
[2026-01-09 16:28:09] -rw-r--r--. 1 boinc boinc       620 Jan  9 16:28 runtime_log
[2026-01-09 16:28:09] -rw-------. 1 boinc boinc   1771520 Jan  9 16:28 result.tar.gz
[2026-01-09 16:28:09] -rw-r--r--. 1 boinc boinc      8817 Jan  9 16:28 runtime_log.err
[2026-01-09 16:28:09] -rw-------. 1 boinc boinc       656 Jan  9 16:28 eihKDmGzCy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmPOlKDm941ymm.diag
[2026-01-09 16:28:09] -rw-r--r--. 1 boinc boinc     20781 Jan  9 16:28 stderr.txt
[2026-01-09 16:28:09] HITS file was successfully produced:
[2026-01-09 16:28:09] -rw-------. 1 boinc boinc 218444097 Jan  9 16:26 shared/HITS.pool.root.1
[2026-01-09 16:28:09]  *** Contents of shared directory: ***
[2026-01-09 16:28:09] total 435108
[2026-01-09 16:28:09] -rw-r--r--. 2 boinc boinc 224716275 Jan  9 13:37 ATLAS.root_0
[2026-01-09 16:28:09] -rw-r--r--. 2 boinc boinc     15847 Jan  9 13:37 start_atlas.sh
[2026-01-09 16:28:09] -rw-r--r--. 2 boinc boinc    592393 Jan  9 13:37 input.tar.gz
[2026-01-09 16:28:09] -rw-------. 1 boinc boinc 218444097 Jan  9 16:26 HITS.pool.root.1
[2026-01-09 16:28:09] -rw-------. 1 boinc boinc   1771520 Jan  9 16:28 result.tar.gz
16:28:11 (17501): run_atlas exited; CPU time 75718.708289
16:28:11 (17501): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN