Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:55:01 (3534675): wrapper (7.7.26015): starting
04:55:01 (3534675): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 04:55:01] Arguments: --nthreads 8
[2026-01-09 04:55:01] Threads: 8
[2026-01-09 04:55:01] Checking for CVMFS
[2026-01-09 04:55:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 04:55:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 04:55:01] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 04:55:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 04:55:02] 2.13.3.0 7268 22730 221720 154938 0 555 20567144 40960000 19410 16776704 0 54024550 99.650 51664205 39520 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 04:55:02] CVMFS is ok
[2026-01-09 04:55:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 04:55:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 04:55:02] Further information can be found at the LHC@home message board.
[2026-01-09 04:55:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 04:55:02] Checking for apptainer binary...
[2026-01-09 04:55:02] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 04:55:02] Running /usr/bin/apptainer --version
[2026-01-09 04:55:02] apptainer version 1.4.5-2.el9
[2026-01-09 04:55:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 04:55:02] c-212-18.aglt2.org
[2026-01-09 04:55:02] apptainer works
[2026-01-09 04:55:02] Set ATHENA_PROC_NUMBER=8
[2026-01-09 04:55:02] Set ATHENA_CORE_NUMBER=8
[2026-01-09 04:55:02] Starting ATLAS job with PandaID=6963160871
[2026-01-09 04:55:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 06:58:51]  *** The last 200 lines of the pilot log: ***
[2026-01-09 06:58:51] 2026-01-09 11:39:53,856 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 06:58:51] 2026-01-09 11:39:53,872 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3296.084125
[2026-01-09 06:58:51] 2026-01-09 11:39:53,905 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6963160871/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 06:58:51] 2026-01-09 11:39:53,905 | INFO     | extracted standard info from prmon json
[2026-01-09 06:58:51] 2026-01-09 11:39:53,906 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 06:58:51] 2026-01-09 11:39:53,906 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 06:58:51] 2026-01-09 11:39:53,906 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 06:58:51] 2026-01-09 11:39:53,906 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 06:58:51] 2026-01-09 11:39:53,908 | INFO     | fitting pss+swap vs Time
[2026-01-09 06:58:51] 2026-01-09 11:39:53,908 | INFO     | sum of square deviations: 338804492.0
[2026-01-09 06:58:51] 2026-01-09 11:39:53,916 | INFO     | sum of deviations: 4111203518.999997
[2026-01-09 06:58:51] 2026-01-09 11:39:53,916 | INFO     | mean x: 1767955664.0
[2026-01-09 06:58:51] 2026-01-09 11:39:53,916 | INFO     | mean y: 2482684.8834951455
[2026-01-09 06:58:51] 2026-01-09 11:39:53,916 | INFO     | intersect: -21450673099.34612
[2026-01-09 06:58:51] 2026-01-09 11:39:53,916 | INFO     | chi2: 2.2330472777825285
[2026-01-09 06:58:51] 2026-01-09 11:39:53,916 | INFO     | sum of square deviations: 291817564.5
[2026-01-09 06:58:51] 2026-01-09 11:39:53,917 | INFO     | sum of deviations: 10197517802.999998
[2026-01-09 06:58:51] 2026-01-09 11:39:53,917 | INFO     | mean x: 1767955511.5
[2026-01-09 06:58:51] 2026-01-09 11:39:53,917 | INFO     | mean y: 2501621.326530612
[2026-01-09 06:58:51] 2026-01-09 11:39:53,917 | INFO     | intersect: -61778419051.915596
[2026-01-09 06:58:51] 2026-01-09 11:39:53,917 | INFO     | chi2: 1.5636476140288806
[2026-01-09 06:58:51] 2026-01-09 11:39:53,917 | INFO     | current chi2=1.5636476140288806 (change=29.97695885858621 %)
[2026-01-09 06:58:51] 2026-01-09 11:39:53,917 | INFO     | sum of square deviations: 249388862.0
[2026-01-09 06:58:51] 2026-01-09 11:39:53,918 | INFO     | sum of deviations: 9783278942.000002
[2026-01-09 06:58:51] 2026-01-09 11:39:53,918 | INFO     | mean x: 1767955359.0
[2026-01-09 06:58:51] 2026-01-09 11:39:53,918 | INFO     | mean y: 2500132.0430107526
[2026-01-09 06:58:51] 2026-01-09 11:39:53,918 | INFO     | intersect: -69352643860.3168
[2026-01-09 06:58:51] 2026-01-09 11:39:53,918 | INFO     | chi2: 1.5679073473970024
[2026-01-09 06:58:51] 2026-01-09 11:39:53,918 | INFO     | current chi2=1.5679073473970024 (change=-0.27242284833896857 %)
[2026-01-09 06:58:51] 2026-01-09 11:39:53,918 | INFO     | right removable region: 92
[2026-01-09 06:58:51] 2026-01-09 11:39:53,919 | INFO     | sum of square deviations: 291817564.5
[2026-01-09 06:58:51] 2026-01-09 11:39:53,919 | INFO     | sum of deviations: -11491805921.0
[2026-01-09 06:58:51] 2026-01-09 11:39:53,919 | INFO     | mean x: 1767955816.5
[2026-01-09 06:58:51] 2026-01-09 11:39:53,919 | INFO     | mean y: 2532195.0204081633
[2026-01-09 06:58:51] 2026-01-09 11:39:53,919 | INFO     | intersect: 69624815401.07837
[2026-01-09 06:58:51] 2026-01-09 11:39:53,919 | INFO     | chi2: 0.7399520950725123
[2026-01-09 06:58:51] 2026-01-09 11:39:53,919 | INFO     | current chi2=0.7399520950725123 (change=66.86357237329507 %)
[2026-01-09 06:58:51] 2026-01-09 11:39:53,941 | INFO     | sum of square deviations: 249388862.0
[2026-01-09 06:58:51] 2026-01-09 11:39:53,941 | INFO     | sum of deviations: -9662653760.0
[2026-01-09 06:58:51] 2026-01-09 11:39:53,941 | INFO     | mean x: 1767955969.0
[2026-01-09 06:58:51] 2026-01-09 11:39:53,941 | INFO     | mean y: 2525577.11827957
[2026-01-09 06:58:51] 2026-01-09 11:39:53,941 | INFO     | intersect: 68502563046.20258
[2026-01-09 06:58:51] 2026-01-09 11:39:53,942 | INFO     | chi2: 0.7386680395207303
[2026-01-09 06:58:51] 2026-01-09 11:39:53,942 | INFO     | current chi2=0.7386680395207303 (change=0.17353225436250327 %)
[2026-01-09 06:58:51] 2026-01-09 11:39:53,942 | INFO     | left removable region: 20
[2026-01-09 06:58:51] 2026-01-09 11:39:53,942 | INFO     | sum of square deviations: 115715658.0
[2026-01-09 06:58:51] 2026-01-09 11:39:53,942 | INFO     | sum of deviations: 464730482.5
[2026-01-09 06:58:51] 2026-01-09 11:39:53,942 | INFO     | mean x: 1767955938.5
[2026-01-09 06:58:51] 2026-01-09 11:39:53,942 | INFO     | mean y: 2530113.9583333335
[2026-01-09 06:58:51] 2026-01-09 11:39:53,942 | INFO     | intersect: -7097831501.21604
[2026-01-09 06:58:51] 2026-01-09 11:39:53,943 | INFO     | chi2: 0.0008799906311654875
[2026-01-09 06:58:51] 2026-01-09 11:39:53,943 | INFO     | current memory leak: 4.02 B/s (using 72 data points, chi2=0.00)
[2026-01-09 06:58:51] 2026-01-09 11:39:53,943 | INFO     | could have reported an average CPU frequency of 3312 MHz (7 samples)
[2026-01-09 06:58:51] 2026-01-09 11:39:53,943 | INFO     | ..............................
[2026-01-09 06:58:51] 2026-01-09 11:39:53,943 | INFO     | . Timing measurements:
[2026-01-09 06:58:51] 2026-01-09 11:39:53,943 | INFO     | . get job = 0 s
[2026-01-09 06:58:51] 2026-01-09 11:39:53,943 | INFO     | . initial setup = 2 s
[2026-01-09 06:58:51] 2026-01-09 11:39:53,944 | INFO     | . payload setup = 8 s
[2026-01-09 06:58:51] 2026-01-09 11:39:53,944 | INFO     | . stage-in = 0 s
[2026-01-09 06:58:51] 2026-01-09 11:39:53,944 | INFO     | . payload execution = 6234 s
[2026-01-09 06:58:51] 2026-01-09 11:39:53,944 | INFO     | . stage-out = 1 s
[2026-01-09 06:58:51] 2026-01-09 11:39:53,944 | INFO     | . log creation = 0 s
[2026-01-09 06:58:51] 2026-01-09 11:39:53,944 | INFO     | ..............................
[2026-01-09 06:58:51] 2026-01-09 11:39:54,037 | INFO     | 
[2026-01-09 06:58:51] 2026-01-09 11:39:54,037 | INFO     | job summary report
[2026-01-09 06:58:51] 2026-01-09 11:39:54,037 | INFO     | --------------------------------------------------
[2026-01-09 06:58:51] 2026-01-09 11:39:54,037 | INFO     | PanDA job id: 6963160871
[2026-01-09 06:58:51] 2026-01-09 11:39:54,037 | INFO     | task id: 47898826
[2026-01-09 06:58:51] 2026-01-09 11:39:54,037 | INFO     | errors: (none)
[2026-01-09 06:58:51] 2026-01-09 11:39:54,037 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 06:58:51] 2026-01-09 11:39:54,037 | INFO     | pilot state: finished 
[2026-01-09 06:58:51] 2026-01-09 11:39:54,037 | INFO     | transexitcode: 0
[2026-01-09 06:58:51] 2026-01-09 11:39:54,037 | INFO     | exeerrorcode: 0
[2026-01-09 06:58:51] 2026-01-09 11:39:54,037 | INFO     | exeerrordiag: 
[2026-01-09 06:58:51] 2026-01-09 11:39:54,037 | INFO     | exitcode: 0
[2026-01-09 06:58:51] 2026-01-09 11:39:54,037 | INFO     | exitmsg: OK
[2026-01-09 06:58:51] 2026-01-09 11:39:54,038 | INFO     | cpuconsumptiontime: 42941 s
[2026-01-09 06:58:51] 2026-01-09 11:39:54,038 | INFO     | nevents: 400
[2026-01-09 06:58:51] 2026-01-09 11:39:54,038 | INFO     | neventsw: 0
[2026-01-09 06:58:51] 2026-01-09 11:39:54,038 | INFO     | pid: 3545531
[2026-01-09 06:58:51] 2026-01-09 11:39:54,038 | INFO     | pgrp: 3545531
[2026-01-09 06:58:51] 2026-01-09 11:39:54,038 | INFO     | corecount: 8
[2026-01-09 06:58:51] 2026-01-09 11:39:54,038 | INFO     | event service: False
[2026-01-09 06:58:51] 2026-01-09 11:39:54,038 | INFO     | sizes: {0: 2283971, 9: 2284233, 11: 2284261, 6246: 2311132, 6249: 2320186, 6256: 2320324}
[2026-01-09 06:58:51] 2026-01-09 11:39:54,038 | INFO     | --------------------------------------------------
[2026-01-09 06:58:51] 2026-01-09 11:39:54,038 | INFO     | 
[2026-01-09 06:58:51] 2026-01-09 11:39:54,038 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-09 06:58:51] 2026-01-09 11:39:54,063 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 06:58:51] 2026-01-09 11:39:54,063 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 06:58:51] 2026-01-09 11:39:54,063 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 06:58:51] 2026-01-09 11:39:54,063 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 06:58:51] 2026-01-09 11:39:54,063 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 06:58:51] 2026-01-09 11:39:54,063 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 06:58:51] 2026-01-09 11:39:54,063 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 06:58:51] 2026-01-09 11:39:54,063 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 06:58:51] 2026-01-09 11:39:54,063 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 06:58:51] 2026-01-09 11:39:54,063 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 06:58:51] 2026-01-09 11:39:54,063 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 06:58:51] 2026-01-09 11:39:54,064 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 06:58:51] 2026-01-09 11:39:54,064 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 06:58:51] 2026-01-09 11:39:54,064 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 06:58:51] 2026-01-09 11:39:54,064 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 06:58:51] 2026-01-09 11:39:54,064 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 06:58:51] 2026-01-09 11:39:54,064 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 06:58:51] 2026-01-09 11:39:54,064 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 06:58:51] 2026-01-09 11:39:54,064 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 06:58:51] 2026-01-09 11:39:54,064 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 06:58:51] 2026-01-09 11:39:54,064 | INFO     | job 6963160871 has completed (purged errors)
[2026-01-09 06:58:51] 2026-01-09 11:39:54,064 | INFO     | overall cleanup function is called
[2026-01-09 06:58:51] 2026-01-09 11:39:55,076 | INFO     | --- collectZombieJob: --- 10, [3545531]
[2026-01-09 06:58:51] 2026-01-09 11:39:55,076 | INFO     | zombie collector waiting for pid 3545531
[2026-01-09 06:58:51] 2026-01-09 11:39:55,076 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 06:58:51] 2026-01-09 11:39:55,076 | INFO     | collected zombie processes
[2026-01-09 06:58:51] 2026-01-09 11:39:55,076 | INFO     | will attempt to kill all subprocesses of pid=3545531
[2026-01-09 06:58:51] 2026-01-09 11:39:55,567 | INFO     | process IDs to be killed: [3545531] (in reverse order)
[2026-01-09 06:58:51] 2026-01-09 11:39:55,725 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 06:58:51] 2026-01-09 11:39:55,726 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 06:58:51] 2026-01-09 11:39:55,741 | INFO     | did not find any defunct processes belonging to 3545531
[2026-01-09 06:58:51] 2026-01-09 11:39:55,754 | INFO     | did not find any defunct processes belonging to 3545531
[2026-01-09 06:58:51] 2026-01-09 11:39:55,755 | INFO     | ready for new job
[2026-01-09 06:58:51] 2026-01-09 11:39:55,755 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 06:58:51] 2026-01-09 11:39:55,756 | INFO     | ***************************************
[2026-01-09 06:58:51] 2026-01-09 11:39:55,756 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 06:58:51] 2026-01-09 11:39:55,756 | INFO     | ***************************************
[2026-01-09 06:58:51] 2026-01-09 11:39:55,756 | INFO     | 
[2026-01-09 06:58:51] 2026-01-09 11:39:55,760 | INFO     | architecture information:
[2026-01-09 06:58:51] 2026-01-09 11:39:55,761 | INFO     | executing command: cat /etc/os-release
[2026-01-09 06:58:51] 2026-01-09 11:39:55,773 | INFO     | cat /etc/os-release:
[2026-01-09 06:58:51] NAME="CentOS Linux"
[2026-01-09 06:58:51] VERSION="7 (Core)"
[2026-01-09 06:58:51] ID="centos"
[2026-01-09 06:58:51] ID_LIKE="rhel fedora"
[2026-01-09 06:58:51] VERSION_ID="7"
[2026-01-09 06:58:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 06:58:51] ANSI_COLOR="0;31"
[2026-01-09 06:58:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 06:58:51] HOME_URL="https://www.centos.org/"
[2026-01-09 06:58:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 06:58:51] 
[2026-01-09 06:58:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 06:58:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 06:58:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 06:58:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 06:58:51] 
[2026-01-09 06:58:51] 2026-01-09 11:39:55,773 | INFO     | ***************************************
[2026-01-09 06:58:51] 2026-01-09 11:39:56,275 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-09 06:58:51] 2026-01-09 11:39:56,343 | INFO     | sufficient remaining disk space (127263571968 B)
[2026-01-09 06:58:51] 2026-01-09 11:39:56,343 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 06:58:51] 2026-01-09 11:39:56,345 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 06:58:51] 2026-01-09 11:39:56,345 | INFO     | update_server=False
[2026-01-09 06:58:51] 2026-01-09 11:39:56,345 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 06:58:51] 2026-01-09 11:39:57,017 | INFO     | all data control threads have been joined
[2026-01-09 06:58:51] 2026-01-09 11:39:57,076 | INFO     | all payload control threads have been joined
[2026-01-09 06:58:51] 2026-01-09 11:39:57,085 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 06:58:51] 2026-01-09 11:39:57,085 | INFO     | aborting loop
[2026-01-09 06:58:51] 2026-01-09 11:39:57,112 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 06:58:51] 2026-01-09 11:39:57,160 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 06:58:51] 2026-01-09 11:39:57,351 | INFO     | [job] retrieve thread has finished
[2026-01-09 06:58:51] 2026-01-09 11:39:57,698 | INFO     | [data] copytool_in thread has finished
[2026-01-09 06:58:51] 2026-01-09 11:39:57,890 | INFO     | all job control threads have been joined
[2026-01-09 06:58:51] 2026-01-09 11:39:57,909 | INFO     | [job] validate thread has finished
[2026-01-09 06:58:51] 2026-01-09 11:39:57,965 | INFO     | [payload] validate_post thread has finished
[2026-01-09 06:58:51] 2026-01-09 11:39:58,022 | INFO     | [data] control thread has finished
[2026-01-09 06:58:51] 2026-01-09 11:39:58,081 | INFO     | [payload] control thread has finished
[2026-01-09 06:58:51] 2026-01-09 11:39:58,091 | INFO     | [job] job monitor thread has finished
[2026-01-09 06:58:51] 2026-01-09 11:39:58,165 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 06:58:51] 2026-01-09 11:39:58,511 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 06:58:51] 2026-01-09 11:39:58,564 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 06:58:51] 2026-01-09 11:39:58,896 | INFO     | [job] control thread has finished
[2026-01-09 06:58:51] 2026-01-09 11:39:58,924 | INFO     | [payload] failed_post thread has finished
[2026-01-09 06:58:51] 2026-01-09 11:39:59,058 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 06:58:51] 2026-01-09 11:39:59,119 | INFO     | [data] copytool_out thread has finished
[2026-01-09 06:58:51] 2026-01-09 11:40:00,064 | INFO     | [job] queue monitor thread has finished
[2026-01-09 06:58:51] 2026-01-09 11:40:01,170 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 06:58:51] 2026-01-09 11:40:07,292 | INFO     | job.realtimelogging is not enabled
[2026-01-09 06:58:51] 2026-01-09 11:40:08,297 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 06:58:51] 2026-01-09 11:40:16,114 [wrapper] supervise_pilot (15 min periods counter: 8)
[2026-01-09 06:58:51] 2026-01-09 11:40:26,229 | INFO     | PID=3538697 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 06:58:51] 2026-01-09 11:40:26,230 | INFO     | .. there are 30 such processes running
[2026-01-09 06:58:51] 2026-01-09 11:40:26,230 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 06:58:51] 2026-01-09 11:40:26,230 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 06:58:51] 2026-01-09 11:40:26,230 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 06:58:51] 2026-01-09 11:40:29,546 | INFO     | [monitor] cgroup control has ended
[2026-01-09 06:58:51] 2026-01-09 11:40:31,036 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140034168858432)>', '<ExcThread(monitor, started 140033809950464)>']
[2026-01-09 06:58:51] 2026-01-09 11:40:31,260 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 06:58:51] 2026-01-09 11:40:31,260 | INFO     | [monitor] control thread has ended
[2026-01-09 06:58:51] 2026-01-09 11:40:36,061 | INFO     | all workflow threads have been joined
[2026-01-09 06:58:51] 2026-01-09 11:40:36,061 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 06:58:51] 2026-01-09 11:40:36,062 | INFO     | traces error code: 0
[2026-01-09 06:58:51] 2026-01-09 11:40:36,062 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 06:58:51] 2026-01-09 11:40:36,201 [wrapper] ==== pilot stdout END ====
[2026-01-09 06:58:51] 2026-01-09 11:40:36,216 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 06:58:51] 2026-01-09 11:40:36,224 [wrapper] pilotpid: 3538697
[2026-01-09 06:58:51] 2026-01-09 11:40:36,245 [wrapper] Pilot exit status: 0
[2026-01-09 06:58:51] 2026-01-09 11:40:36,275 [wrapper] pandaids: 6963160871
[2026-01-09 06:58:51] 2026-01-09 11:40:36,404 [wrapper] cleanup supervisor_pilot 4184641 3538698
[2026-01-09 06:58:51] 2026-01-09 11:40:36,407 [wrapper] Test setup, not cleaning
[2026-01-09 06:58:51] 2026-01-09 11:40:36,424 [wrapper] apfmon messages muted
[2026-01-09 06:58:51] 2026-01-09 11:40:36,428 [wrapper] ==== wrapper stdout END ====
[2026-01-09 06:58:51] 2026-01-09 11:40:36,432 [wrapper] ==== wrapper stderr END ====
[2026-01-09 06:58:51]  *** Error codes and diagnostics ***
[2026-01-09 06:58:51]     "exeErrorCode": 0,
[2026-01-09 06:58:51]     "exeErrorDiag": "",
[2026-01-09 06:58:51]     "pilotErrorCode": 0,
[2026-01-09 06:58:51]     "pilotErrorDiag": "",
[2026-01-09 06:58:51]  *** Listing of results directory ***
[2026-01-09 06:58:51] total 440700
[2026-01-09 06:58:51] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 16:44 pilot3.tar.gz
[2026-01-09 06:58:51] -rwx------. 1 boincer umatlas     36322 Jan  8 16:46 runpilot2-wrapper.sh
[2026-01-09 06:58:51] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 16:47 queuedata.json
[2026-01-09 06:58:51] -rw-r--r--. 1 boincer umatlas       100 Jan  9 04:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 06:58:51] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 04:55 run_atlas
[2026-01-09 06:58:51] -rw-r--r--. 1 boincer umatlas       105 Jan  9 04:55 job.xml
[2026-01-09 06:58:51] -rw-r--r--. 2 boincer umatlas 223013485 Jan  9 04:55 EVNT.47898824._001263.pool.root.1
[2026-01-09 06:58:51] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 04:55 start_atlas.sh
[2026-01-09 06:58:51] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 04:55 shared
[2026-01-09 06:58:51] -rw-r--r--. 2 boincer umatlas    592398 Jan  9 04:55 input.tar.gz
[2026-01-09 06:58:51] -rw-r--r--. 1 boincer umatlas         0 Jan  9 04:55 boinc_lockfile
[2026-01-09 06:58:51] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 04:55 pandaJob.out
[2026-01-09 06:58:51] -rw-------. 1 boincer umatlas        57 Jan  9 04:55 setup.sh.local
[2026-01-09 06:58:51] -rw-------. 1 boincer umatlas    989751 Jan  9 04:55 agis_schedconf.cvmfs.json
[2026-01-09 06:58:51] -rw-------. 1 boincer umatlas   1516240 Jan  9 04:55 agis_ddmendpoints.agis.ALL.json
[2026-01-09 06:58:51] drwx------. 5 boincer umatlas      4096 Jan  9 04:55 pilot3
[2026-01-09 06:58:51] -rw-------. 1 boincer umatlas 221842680 Jan  9 06:39 HITS.47898826._032694.pool.root.1
[2026-01-09 06:58:51] -rw-r--r--. 1 boincer umatlas       529 Jan  9 06:39 boinc_task_state.xml
[2026-01-09 06:58:51] -rw-------. 1 boincer umatlas      1034 Jan  9 06:39 memory_monitor_summary.json
[2026-01-09 06:58:51] -rw-------. 1 boincer umatlas    359683 Jan  9 06:39 log.47898826._032694.job.log.tgz.1
[2026-01-09 06:58:51] -rw-------. 1 boincer umatlas        95 Jan  9 06:39 pilot_heartbeat.json
[2026-01-09 06:58:51] -rw-------. 1 boincer umatlas      7774 Jan  9 06:39 heartbeat.json
[2026-01-09 06:58:51] -rw-------. 1 boincer umatlas      4897 Jan  9 06:40 pilotlog.txt
[2026-01-09 06:58:51] -rw-------. 1 boincer umatlas    895984 Jan  9 06:40 log.47898826._032694.job.log.1
[2026-01-09 06:58:51] -rw-------. 1 boincer umatlas       357 Jan  9 06:40 output.list
[2026-01-09 06:58:51] -rw-r--r--. 1 boincer umatlas       620 Jan  9 06:40 runtime_log
[2026-01-09 06:58:51] -rw-------. 1 boincer umatlas   1269760 Jan  9 06:40 result.tar.gz
[2026-01-09 06:58:51] -rw-r--r--. 1 boincer umatlas      9342 Jan  9 06:40 runtime_log.err
[2026-01-09 06:58:51] -rw-------. 1 boincer umatlas       652 Jan  9 06:40 nGpNDmq0Cy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmESlKDmy2aXmn.diag
[2026-01-09 06:58:51] -rw-r--r--. 1 boincer umatlas      6958 Jan  9 06:58 init_data.xml
[2026-01-09 06:58:51] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 06:58 boinc_mmap_file
[2026-01-09 06:58:51] -rw-r--r--. 1 boincer umatlas        27 Jan  9 06:58 wrapper_checkpoint.txt
[2026-01-09 06:58:51] -rw-r--r--. 1 boincer umatlas     21009 Jan  9 06:58 stderr.txt
[2026-01-09 06:58:51] HITS file was successfully produced:
[2026-01-09 06:58:51] -rw-------. 1 boincer umatlas 221842680 Jan  9 06:39 shared/HITS.pool.root.1
[2026-01-09 06:58:51]  *** Contents of shared directory: ***
[2026-01-09 06:58:51] total 436276
[2026-01-09 06:58:51] -rw-r--r--. 2 boincer umatlas 223013485 Jan  9 04:55 ATLAS.root_0
[2026-01-09 06:58:51] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 04:55 start_atlas.sh
[2026-01-09 06:58:51] -rw-r--r--. 2 boincer umatlas    592398 Jan  9 04:55 input.tar.gz
[2026-01-09 06:58:51] -rw-------. 1 boincer umatlas 221842680 Jan  9 06:39 HITS.pool.root.1
[2026-01-09 06:58:51] -rw-------. 1 boincer umatlas   1269760 Jan  9 06:40 result.tar.gz
06:58:53 (3534675): run_atlas exited; CPU time 43118.181650
06:58:53 (3534675): called boinc_finish(0)

</stderr_txt>
]]>

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