Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
01:31:26 (883004): wrapper (7.7.26015): starting
01:31:26 (883004): wrapper: running run_atlas (--nthreads 4)
[2026-01-09 01:31:26] Arguments: --nthreads 4
[2026-01-09 01:31:26] Threads: 4
[2026-01-09 01:31:26] Checking for CVMFS
[2026-01-09 01:31:26] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 01:31:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 01:31:26] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 01:31:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 01:31:26] 2.13.3.0 7052 236 57064 154938 3 227 2794289 6144000 12167 130560 0 2275499 100.000 6788 788 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-09 01:31:26] CVMFS is ok
[2026-01-09 01:31:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 01:31:26] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-09 01:31:26] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-09 01:31:26] Further information can be found at the LHC@home message board.
[2026-01-09 01:31:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 01:31:26] Checking for apptainer binary...
[2026-01-09 01:31:26] apptainer is not installed, using version from CVMFS
[2026-01-09 01:31:26] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 01:31:26] p8
[2026-01-09 01:31:26] apptainer works
[2026-01-09 01:31:26] Set ATHENA_PROC_NUMBER=4
[2026-01-09 01:31:26] Set ATHENA_CORE_NUMBER=4
[2026-01-09 01:31:26] Starting ATLAS job with PandaID=6963147664
[2026-01-09 01:31:26] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/mnt/data/boinc-0/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 03:22:48]  *** The last 200 lines of the pilot log: ***
[2026-01-09 03:22:48] 2026-01-09 11:21:50,617 | INFO     | monitor loop #486: job 0:6963147664 is in state 'finished'
[2026-01-09 03:22:48] 2026-01-09 11:21:50,617 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 03:22:48] 2026-01-09 11:21:51,291 | INFO     | time since job start (6619s) is within the limit (349056.0s)
[2026-01-09 03:22:48] 2026-01-09 11:21:53,120 | INFO     | monitor loop #487: job 0:6963147664 is in state 'finished'
[2026-01-09 03:22:48] 2026-01-09 11:21:53,120 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 03:22:48] 2026-01-09 11:21:53,297 | INFO     | time since job start (6621s) is within the limit (349056.0s)
[2026-01-09 03:22:48] 2026-01-09 11:21:55,303 | INFO     | time since job start (6623s) is within the limit (349056.0s)
[2026-01-09 03:22:48] 2026-01-09 11:21:55,623 | INFO     | monitor loop #488: job 0:6963147664 is in state 'finished'
[2026-01-09 03:22:48] 2026-01-09 11:21:55,623 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 03:22:48] 2026-01-09 11:21:56,909 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 03:22:48] 2026-01-09 11:21:56,913 | INFO     | found 32 cores (32 cores per socket, 1 socket) HT, CPU MHz: 4450.987796875001
[2026-01-09 03:22:48] 2026-01-09 11:21:56,917 | INFO     | using path: /mnt/data/boinc-0/slots/7/PanDA_Pilot-6963147664/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 03:22:48] 2026-01-09 11:21:56,918 | INFO     | extracted standard info from prmon json
[2026-01-09 03:22:48] 2026-01-09 11:21:56,918 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 03:22:48] 2026-01-09 11:21:56,918 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 03:22:48] 2026-01-09 11:21:56,918 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 03:22:48] 2026-01-09 11:21:56,918 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 03:22:48] 2026-01-09 11:21:56,919 | INFO     | fitting pss+swap vs Time
[2026-01-09 03:22:48] 2026-01-09 11:21:56,919 | INFO     | sum of square deviations: 390582207.0
[2026-01-09 03:22:48] 2026-01-09 11:21:56,919 | INFO     | sum of deviations: 8042718575.5
[2026-01-09 03:22:48] 2026-01-09 11:21:56,919 | INFO     | mean x: 1767954373.5
[2026-01-09 03:22:48] 2026-01-09 11:21:56,919 | INFO     | mean y: 2330530.953703704
[2026-01-09 03:22:48] 2026-01-09 11:21:56,919 | INFO     | intersect: -36402705913.486565
[2026-01-09 03:22:48] 2026-01-09 11:21:56,920 | INFO     | chi2: 1.0526395263499715
[2026-01-09 03:22:48] 2026-01-09 11:21:56,920 | INFO     | sum of square deviations: 338804492.0
[2026-01-09 03:22:48] 2026-01-09 11:21:56,920 | INFO     | sum of deviations: 7615389267.0
[2026-01-09 03:22:48] 2026-01-09 11:21:56,920 | INFO     | mean x: 1767954221.0
[2026-01-09 03:22:48] 2026-01-09 11:21:56,920 | INFO     | mean y: 2329271.5436893203
[2026-01-09 03:22:48] 2026-01-09 11:21:56,920 | INFO     | intersect: -39736398865.36291
[2026-01-09 03:22:48] 2026-01-09 11:21:56,920 | INFO     | chi2: 1.054444953038496
[2026-01-09 03:22:48] 2026-01-09 11:21:56,920 | INFO     | current chi2=1.054444953038496 (change=-0.17151424047174899 %)
[2026-01-09 03:22:48] 2026-01-09 11:21:56,920 | INFO     | right removable region: 102
[2026-01-09 03:22:48] 2026-01-09 11:21:56,920 | INFO     | sum of square deviations: 338804492.0
[2026-01-09 03:22:48] 2026-01-09 11:21:56,920 | INFO     | sum of deviations: -144131349.00000003
[2026-01-09 03:22:48] 2026-01-09 11:21:56,921 | INFO     | mean x: 1767954526.0
[2026-01-09 03:22:48] 2026-01-09 11:21:56,921 | INFO     | mean y: 2353747.786407767
[2026-01-09 03:22:48] 2026-01-09 11:21:56,921 | INFO     | intersect: 754462048.649891
[2026-01-09 03:22:48] 2026-01-09 11:21:56,921 | INFO     | chi2: 0.0010148161525843909
[2026-01-09 03:22:48] 2026-01-09 11:21:56,921 | INFO     | current chi2=0.0010148161525843909 (change=99.903593193379 %)
[2026-01-09 03:22:48] 2026-01-09 11:21:56,921 | INFO     | sum of square deviations: 291817564.5
[2026-01-09 03:22:48] 2026-01-09 11:21:56,921 | INFO     | sum of deviations: -301686022.49999994
[2026-01-09 03:22:48] 2026-01-09 11:21:56,921 | INFO     | mean x: 1767954678.5
[2026-01-09 03:22:48] 2026-01-09 11:21:56,921 | INFO     | mean y: 2354254.6224489794
[2026-01-09 03:22:48] 2026-01-09 11:21:56,921 | INFO     | intersect: 1830096240.7184613
[2026-01-09 03:22:48] 2026-01-09 11:21:56,921 | INFO     | chi2: 0.0008473284234946426
[2026-01-09 03:22:48] 2026-01-09 11:21:56,921 | INFO     | current chi2=0.0008473284234946426 (change=16.504243518711647 %)
[2026-01-09 03:22:48] 2026-01-09 11:21:56,921 | INFO     | left removable region: 20
[2026-01-09 03:22:48] 2026-01-09 11:21:56,921 | INFO     | sum of square deviations: 170944600.5
[2026-01-09 03:22:48] 2026-01-09 11:21:56,921 | INFO     | sum of deviations: -269000850.0
[2026-01-09 03:22:48] 2026-01-09 11:21:56,921 | INFO     | mean x: 1767954800.5
[2026-01-09 03:22:48] 2026-01-09 11:21:56,922 | INFO     | mean y: 2353760.1951219514
[2026-01-09 03:22:48] 2026-01-09 11:21:56,922 | INFO     | intersect: 2784432531.358651
[2026-01-09 03:22:48] 2026-01-09 11:21:56,922 | INFO     | chi2: 0.000756311355979584
[2026-01-09 03:22:48] 2026-01-09 11:21:56,922 | INFO     | current memory leak: -1.57 B/s (using 82 data points, chi2=0.00)
[2026-01-09 03:22:48] 2026-01-09 11:21:56,922 | INFO     | could have reported an average CPU frequency of 4383 MHz (7 samples)
[2026-01-09 03:22:48] 2026-01-09 11:21:56,922 | INFO     | ..............................
[2026-01-09 03:22:48] 2026-01-09 11:21:56,922 | INFO     | . Timing measurements:
[2026-01-09 03:22:48] 2026-01-09 11:21:56,922 | INFO     | . get job = 0 s
[2026-01-09 03:22:48] 2026-01-09 11:21:56,922 | INFO     | . initial setup = 2 s
[2026-01-09 03:22:48] 2026-01-09 11:21:56,922 | INFO     | . payload setup = 2 s
[2026-01-09 03:22:48] 2026-01-09 11:21:56,922 | INFO     | . stage-in = 0 s
[2026-01-09 03:22:48] 2026-01-09 11:21:56,922 | INFO     | . payload execution = 6589 s
[2026-01-09 03:22:48] 2026-01-09 11:21:56,922 | INFO     | . stage-out = 0 s
[2026-01-09 03:22:48] 2026-01-09 11:21:56,922 | INFO     | . log creation = 0 s
[2026-01-09 03:22:48] 2026-01-09 11:21:56,922 | INFO     | ..............................
[2026-01-09 03:22:48] 2026-01-09 11:21:56,966 | INFO     | 
[2026-01-09 03:22:48] 2026-01-09 11:21:56,966 | INFO     | job summary report
[2026-01-09 03:22:48] 2026-01-09 11:21:56,966 | INFO     | --------------------------------------------------
[2026-01-09 03:22:48] 2026-01-09 11:21:56,966 | INFO     | PanDA job id: 6963147664
[2026-01-09 03:22:48] 2026-01-09 11:21:56,966 | INFO     | task id: 47898826
[2026-01-09 03:22:48] 2026-01-09 11:21:56,966 | INFO     | errors: (none)
[2026-01-09 03:22:48] 2026-01-09 11:21:56,966 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 03:22:48] 2026-01-09 11:21:56,966 | INFO     | pilot state: finished 
[2026-01-09 03:22:48] 2026-01-09 11:21:56,966 | INFO     | transexitcode: 0
[2026-01-09 03:22:48] 2026-01-09 11:21:56,967 | INFO     | exeerrorcode: 0
[2026-01-09 03:22:48] 2026-01-09 11:21:56,967 | INFO     | exeerrordiag: 
[2026-01-09 03:22:48] 2026-01-09 11:21:56,967 | INFO     | exitcode: 0
[2026-01-09 03:22:48] 2026-01-09 11:21:56,967 | INFO     | exitmsg: OK
[2026-01-09 03:22:48] 2026-01-09 11:21:56,967 | INFO     | cpuconsumptiontime: 25750 s
[2026-01-09 03:22:48] 2026-01-09 11:21:56,967 | INFO     | nevents: 400
[2026-01-09 03:22:48] 2026-01-09 11:21:56,967 | INFO     | neventsw: 0
[2026-01-09 03:22:48] 2026-01-09 11:21:56,967 | INFO     | pid: 894028
[2026-01-09 03:22:48] 2026-01-09 11:21:56,967 | INFO     | pgrp: 894028
[2026-01-09 03:22:48] 2026-01-09 11:21:56,967 | INFO     | corecount: 4
[2026-01-09 03:22:48] 2026-01-09 11:21:56,967 | INFO     | event service: False
[2026-01-09 03:22:48] 2026-01-09 11:21:56,967 | INFO     | sizes: {0: 2283971, 2: 2284233, 11: 2284261, 6595: 2320450, 6611: 2320588}
[2026-01-09 03:22:48] 2026-01-09 11:21:56,967 | INFO     | --------------------------------------------------
[2026-01-09 03:22:48] 2026-01-09 11:21:56,967 | INFO     | 
[2026-01-09 03:22:48] 2026-01-09 11:21:56,967 | INFO     | executing command: ls -lF /mnt/data/boinc-0/slots/7
[2026-01-09 03:22:48] 2026-01-09 11:21:56,978 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 03:22:48] 2026-01-09 11:21:56,978 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 03:22:48] 2026-01-09 11:21:56,978 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 03:22:48] 2026-01-09 11:21:56,978 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 03:22:48] 2026-01-09 11:21:56,978 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 03:22:48] 2026-01-09 11:21:56,978 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 03:22:48] 2026-01-09 11:21:56,979 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 03:22:48] 2026-01-09 11:21:56,979 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 03:22:48] 2026-01-09 11:21:56,979 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 03:22:48] 2026-01-09 11:21:56,979 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 03:22:48] 2026-01-09 11:21:56,979 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 03:22:48] 2026-01-09 11:21:56,979 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 03:22:48] 2026-01-09 11:21:56,979 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 03:22:48] 2026-01-09 11:21:56,979 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 03:22:48] 2026-01-09 11:21:56,979 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 03:22:48] 2026-01-09 11:21:56,979 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 03:22:48] 2026-01-09 11:21:56,979 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 03:22:48] 2026-01-09 11:21:56,979 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 03:22:48] 2026-01-09 11:21:56,979 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 03:22:48] 2026-01-09 11:21:56,979 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 03:22:48] 2026-01-09 11:21:56,979 | INFO     | job 6963147664 has completed (purged errors)
[2026-01-09 03:22:48] 2026-01-09 11:21:56,979 | INFO     | overall cleanup function is called
[2026-01-09 03:22:48] 2026-01-09 11:21:57,986 | INFO     | --- collectZombieJob: --- 10, [894028]
[2026-01-09 03:22:48] 2026-01-09 11:21:57,986 | INFO     | zombie collector waiting for pid 894028
[2026-01-09 03:22:48] 2026-01-09 11:21:57,986 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 03:22:48] 2026-01-09 11:21:57,986 | INFO     | collected zombie processes
[2026-01-09 03:22:48] 2026-01-09 11:21:57,986 | INFO     | will attempt to kill all subprocesses of pid=894028
[2026-01-09 03:22:48] 2026-01-09 11:21:58,113 | INFO     | process IDs to be killed: [894028] (in reverse order)
[2026-01-09 03:22:48] 2026-01-09 11:21:58,164 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 03:22:48] 2026-01-09 11:21:58,164 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 03:22:48] 2026-01-09 11:21:58,169 | INFO     | did not find any defunct processes belonging to 894028
[2026-01-09 03:22:48] 2026-01-09 11:21:58,174 | INFO     | did not find any defunct processes belonging to 894028
[2026-01-09 03:22:48] 2026-01-09 11:21:58,174 | INFO     | ready for new job
[2026-01-09 03:22:48] 2026-01-09 11:21:58,174 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 03:22:48] 2026-01-09 11:21:58,175 | INFO     | ***************************************
[2026-01-09 03:22:48] 2026-01-09 11:21:58,175 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 03:22:48] 2026-01-09 11:21:58,175 | INFO     | ***************************************
[2026-01-09 03:22:48] 2026-01-09 11:21:58,175 | INFO     | 
[2026-01-09 03:22:48] 2026-01-09 11:21:58,177 | INFO     | architecture information:
[2026-01-09 03:22:48] 2026-01-09 11:21:58,177 | INFO     | executing command: cat /etc/os-release
[2026-01-09 03:22:48] 2026-01-09 11:21:58,189 | INFO     | cat /etc/os-release:
[2026-01-09 03:22:48] NAME="CentOS Linux"
[2026-01-09 03:22:48] VERSION="7 (Core)"
[2026-01-09 03:22:48] ID="centos"
[2026-01-09 03:22:48] ID_LIKE="rhel fedora"
[2026-01-09 03:22:48] VERSION_ID="7"
[2026-01-09 03:22:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 03:22:48] ANSI_COLOR="0;31"
[2026-01-09 03:22:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 03:22:48] HOME_URL="https://www.centos.org/"
[2026-01-09 03:22:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 03:22:48] 
[2026-01-09 03:22:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 03:22:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 03:22:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 03:22:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 03:22:48] 
[2026-01-09 03:22:48] 2026-01-09 11:21:58,189 | INFO     | ***************************************
[2026-01-09 03:22:48] 2026-01-09 11:21:58,693 | INFO     | executing command: df -mP /mnt/data/boinc-0/slots/7
[2026-01-09 03:22:48] 2026-01-09 11:21:58,712 | INFO     | sufficient remaining disk space (347789590528 B)
[2026-01-09 03:22:48] 2026-01-09 11:21:58,712 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 03:22:48] 2026-01-09 11:21:58,712 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 03:22:48] 2026-01-09 11:21:58,712 | INFO     | update_server=False
[2026-01-09 03:22:48] 2026-01-09 11:21:58,712 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 03:22:48] 2026-01-09 11:21:58,712 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 03:22:48] 2026-01-09 11:21:58,901 | INFO     | all data control threads have been joined
[2026-01-09 03:22:48] 2026-01-09 11:21:59,013 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 03:22:48] 2026-01-09 11:21:59,132 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 03:22:48] 2026-01-09 11:21:59,132 | INFO     | aborting loop
[2026-01-09 03:22:48] 2026-01-09 11:21:59,179 | INFO     | all payload control threads have been joined
[2026-01-09 03:22:48] 2026-01-09 11:21:59,718 | INFO     | [job] retrieve thread has finished
[2026-01-09 03:22:48] 2026-01-09 11:21:59,718 | INFO     | [job] queue monitor thread has finished
[2026-01-09 03:22:48] 2026-01-09 11:21:59,906 | INFO     | [data] control thread has finished
[2026-01-09 03:22:48] 2026-01-09 11:22:00,137 | INFO     | [job] job monitor thread has finished
[2026-01-09 03:22:48] 2026-01-09 11:22:00,184 | INFO     | [payload] control thread has finished
[2026-01-09 03:22:48] 2026-01-09 11:22:00,258 | INFO     | all job control threads have been joined
[2026-01-09 03:22:48] 2026-01-09 11:22:00,376 | INFO     | [job] validate thread has finished
[2026-01-09 03:22:48] 2026-01-09 11:22:00,549 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 03:22:48] 2026-01-09 11:22:00,551 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 03:22:48] 2026-01-09 11:22:00,559 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 03:22:48] 2026-01-09 11:22:00,797 | INFO     | [payload] validate_post thread has finished
[2026-01-09 03:22:48] 2026-01-09 11:22:00,843 | INFO     | [payload] failed_post thread has finished
[2026-01-09 03:22:48] 2026-01-09 11:22:01,017 | INFO     | [data] copytool_out thread has finished
[2026-01-09 03:22:48] 2026-01-09 11:22:01,039 | INFO     | [data] copytool_in thread has finished
[2026-01-09 03:22:48] 2026-01-09 11:22:01,049 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 03:22:48] 2026-01-09 11:22:01,156 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 03:22:48] 2026-01-09 11:22:01,263 | INFO     | [job] control thread has finished
[2026-01-09 03:22:48] 2026-01-09 11:22:04,555 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 03:22:48] 2026-01-09 11:22:28,522 | INFO     | PID=887032 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 03:22:48] 2026-01-09 11:22:28,522 | INFO     | .. there are 16 such processes running
[2026-01-09 03:22:48] 2026-01-09 11:22:28,522 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 03:22:48] 2026-01-09 11:22:28,522 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 03:22:48] 2026-01-09 11:22:28,522 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 03:22:48] 2026-01-09 11:22:43,281 | INFO     | [monitor] cgroup control has ended
[2026-01-09 03:22:48] 2026-01-09 11:22:43,703 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 125287737673536)>', '<ExcThread(monitor, started 125287207528192)>']
[2026-01-09 03:22:48] 2026-01-09 11:22:44,601 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 03:22:48] 2026-01-09 11:22:44,601 | INFO     | [monitor] control thread has ended
[2026-01-09 03:22:48] 2026-01-09 11:22:48,729 | INFO     | all workflow threads have been joined
[2026-01-09 03:22:48] 2026-01-09 11:22:48,729 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 03:22:48] 2026-01-09 11:22:48,729 | INFO     | traces error code: 0
[2026-01-09 03:22:48] 2026-01-09 11:22:48,729 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 03:22:48] 2026-01-09 11:22:48,800 [wrapper] ==== pilot stdout END ====
[2026-01-09 03:22:48] 2026-01-09 11:22:48,801 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 03:22:48] 2026-01-09 11:22:48,803 [wrapper] pilotpid: 887032
[2026-01-09 03:22:48] 2026-01-09 11:22:48,804 [wrapper] Pilot exit status: 0
[2026-01-09 03:22:48] 2026-01-09 11:22:48,809 [wrapper] pandaids: 6963147664
[2026-01-09 03:22:48] 2026-01-09 11:22:48,837 [wrapper] cleanup supervisor_pilot 1304224 887033
[2026-01-09 03:22:48] 2026-01-09 11:22:48,839 [wrapper] Test setup, not cleaning
[2026-01-09 03:22:48] 2026-01-09 11:22:48,840 [wrapper] apfmon messages muted
[2026-01-09 03:22:48] 2026-01-09 11:22:48,842 [wrapper] ==== wrapper stdout END ====
[2026-01-09 03:22:48] 2026-01-09 11:22:48,843 [wrapper] ==== wrapper stderr END ====
[2026-01-09 03:22:48]  *** Error codes and diagnostics ***
[2026-01-09 03:22:48]     "exeErrorCode": 0,
[2026-01-09 03:22:48]     "exeErrorDiag": "",
[2026-01-09 03:22:48]     "pilotErrorCode": 0,
[2026-01-09 03:22:48]     "pilotErrorDiag": "",
[2026-01-09 03:22:48]  *** Listing of results directory ***
[2026-01-09 03:22:48] total 439948
[2026-01-09 03:22:48] -rw-r--r-- 1 boinc boinc    579449 Jan  8 08:02 pilot3.tar.gz
[2026-01-09 03:22:48] -rw-r--r-- 1 boinc boinc      5112 Jan  8 08:02 queuedata.json
[2026-01-09 03:22:48] -rwx------ 1 boinc boinc     36322 Jan  8 08:03 runpilot2-wrapper.sh
[2026-01-09 03:22:48] -rw-r--r-- 1 boinc boinc       100 Jan  9 01:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 03:22:48] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 01:31 run_atlas
[2026-01-09 03:22:48] -rw-r--r-- 1 boinc boinc       105 Jan  9 01:31 job.xml
[2026-01-09 03:22:48] -rw-r--r-- 2 boinc boinc 225110247 Jan  9 01:31 EVNT.47898824._000823.pool.root.1
[2026-01-09 03:22:48] -rw-r--r-- 2 boinc boinc    592401 Jan  9 01:31 input.tar.gz
[2026-01-09 03:22:48] drwxrwx--x 2 boinc boinc      4096 Jan  9 01:31 shared
[2026-01-09 03:22:48] -rw-r--r-- 2 boinc boinc     15847 Jan  9 01:31 start_atlas.sh
[2026-01-09 03:22:48] -rw-r--r-- 1 boinc boinc         0 Jan  9 01:31 boinc_setup_complete
[2026-01-09 03:22:48] -rw-r--r-- 1 boinc boinc     10140 Jan  9 01:31 init_data.xml
[2026-01-09 03:22:48] -rw-r--r-- 1 boinc boinc         0 Jan  9 01:31 boinc_lockfile
[2026-01-09 03:22:48] -rw-r--r-- 1 boinc boinc      2518 Jan  9 01:31 pandaJob.out
[2026-01-09 03:22:48] -rw------- 1 boinc boinc    989751 Jan  9 01:31 agis_schedconf.cvmfs.json
[2026-01-09 03:22:48] -rw------- 1 boinc boinc   1516240 Jan  9 01:31 agis_ddmendpoints.agis.ALL.json
[2026-01-09 03:22:48] drwx------ 5 boinc boinc      4096 Jan  9 01:31 pilot3
[2026-01-09 03:22:48] -rw------- 1 boinc boinc 218978944 Jan  9 03:21 HITS.47898826._027782.pool.root.1
[2026-01-09 03:22:48] -rw------- 1 boinc boinc      1032 Jan  9 03:21 memory_monitor_summary.json
[2026-01-09 03:22:48] -rw-r--r-- 1 boinc boinc       529 Jan  9 03:21 boinc_task_state.xml
[2026-01-09 03:22:48] -rw------- 1 boinc boinc    288861 Jan  9 03:21 log.47898826._027782.job.log.tgz.1
[2026-01-09 03:22:48] -rw------- 1 boinc boinc        95 Jan  9 03:21 pilot_heartbeat.json
[2026-01-09 03:22:48] -rw------- 1 boinc boinc      7760 Jan  9 03:21 heartbeat.json
[2026-01-09 03:22:48] -rw-r--r-- 1 boinc boinc      8192 Jan  9 03:22 boinc_mmap_file
[2026-01-09 03:22:48] -rw-r--r-- 1 boinc boinc        27 Jan  9 03:22 wrapper_checkpoint.txt
[2026-01-09 03:22:48] -rw------- 1 boinc boinc      4827 Jan  9 03:22 pilotlog.txt
[2026-01-09 03:22:48] -rw------- 1 boinc boinc    958630 Jan  9 03:22 log.47898826._027782.job.log.1
[2026-01-09 03:22:48] -rw------- 1 boinc boinc       357 Jan  9 03:22 output.list
[2026-01-09 03:22:48] -rw-r--r-- 1 boinc boinc       620 Jan  9 03:22 runtime_log
[2026-01-09 03:22:48] -rw------- 1 boinc boinc   1269760 Jan  9 03:22 result.tar.gz
[2026-01-09 03:22:48] -rw-r--r-- 1 boinc boinc      8824 Jan  9 03:22 runtime_log.err
[2026-01-09 03:22:48] -rw------- 1 boinc boinc       644 Jan  9 03:22 CVZNDm3e7x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm1efKDmOF0sZm.diag
[2026-01-09 03:22:48] -rw-r--r-- 1 boinc boinc     21358 Jan  9 03:22 stderr.txt
[2026-01-09 03:22:48] HITS file was successfully produced:
[2026-01-09 03:22:48] -rw------- 1 boinc boinc 218978944 Jan  9 03:21 shared/HITS.pool.root.1
[2026-01-09 03:22:48]  *** Contents of shared directory: ***
[2026-01-09 03:22:48] total 435528
[2026-01-09 03:22:48] -rw-r--r-- 2 boinc boinc 225110247 Jan  9 01:31 ATLAS.root_0
[2026-01-09 03:22:48] -rw-r--r-- 2 boinc boinc    592401 Jan  9 01:31 input.tar.gz
[2026-01-09 03:22:48] -rw-r--r-- 2 boinc boinc     15847 Jan  9 01:31 start_atlas.sh
[2026-01-09 03:22:48] -rw------- 1 boinc boinc 218978944 Jan  9 03:21 HITS.pool.root.1
[2026-01-09 03:22:48] -rw------- 1 boinc boinc   1269760 Jan  9 03:22 result.tar.gz
03:22:50 (883004): run_atlas exited; CPU time 25851.178915
03:22:50 (883004): called boinc_finish(0)

</stderr_txt>
]]>

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