Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:12:31 (2505422): wrapper (7.7.26015): starting
22:12:31 (2505422): wrapper: running run_atlas (--nthreads 6)
[2026-01-09 22:12:31] Arguments: --nthreads 6
[2026-01-09 22:12:31] Threads: 6
[2026-01-09 22:12:31] Checking for CVMFS
[2026-01-09 22:12:31] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 22:12:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 22:12:31] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 22:12:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 22:12:31] 2.13.3.0 2126625 475 56776 154944 2 57 46904757 52428800 1858 130560 0 1202204 99.997 16563 14 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-01-09 22:12:31] CVMFS is ok
[2026-01-09 22:12:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 22:12:31] Checking for apptainer binary...
[2026-01-09 22:12:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 22:12:31] Running /usr/bin/apptainer --version
[2026-01-09 22:12:31] apptainer version 1.4.4-1.el9
[2026-01-09 22:12:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 22:12:32] testio008
[2026-01-09 22:12:32] apptainer works
[2026-01-09 22:12:32] Set ATHENA_PROC_NUMBER=6
[2026-01-09 22:12:32] Set ATHENA_CORE_NUMBER=6
[2026-01-09 22:12:32] Starting ATLAS job with PandaID=6963156830
[2026-01-09 22:12:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 23:47:57]  *** The last 200 lines of the pilot log: ***
[2026-01-09 23:47:57]  lfn=log.47898826._031979.job.log.tgz.1
[2026-01-09 23:47:57]  mtime=0
[2026-01-09 23:47:57]  protocol_id=None
[2026-01-09 23:47:57]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-09 23:47:57]  replicas=None
[2026-01-09 23:47:57]  scope=mc23_13p6TeV
[2026-01-09 23:47:57]  status=None
[2026-01-09 23:47:57]  status_code=0
[2026-01-09 23:47:57]  storage_token=
[2026-01-09 23:47:57]  surl=/var/lib/boinc/slots/1/PanDA_Pilot-6963156830/log.47898826._031979.job.log.tgz.1
[2026-01-09 23:47:57]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/48/20/log.47898826._031979.job.log.tgz.1
[2026-01-09 23:47:57]  workdir=None
[2026-01-09 23:47:57] ]
[2026-01-09 23:47:57] 2026-01-09 14:47:06,756 | INFO     | transferring file log.47898826._031979.job.log.tgz.1 from /var/lib/boinc/slots/1/PanDA_Pilot-6963156830/log.47898826._031979.job.log.tgz.1 to /var/lib/boinc/slots/
[2026-01-09 23:47:57] 2026-01-09 14:47:06,757 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/1/PanDA_Pilot-6963156830/log.47898826._031979.job.log.tgz.1 /var/lib/boinc/slots/1/log.47898826._031979.job
[2026-01-09 23:47:57] 2026-01-09 14:47:06,766 | INFO     | adding to output.list: log.47898826._031979.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/48/20/log.47898826._031979.job.log.tg
[2026-01-09 23:47:57] 2026-01-09 14:47:06,767 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-09 23:47:57] 2026-01-09 14:47:06,767 | INFO     | summary of transferred files:
[2026-01-09 23:47:57] 2026-01-09 14:47:06,767 | INFO     |  -- lfn=log.47898826._031979.job.log.tgz.1, status_code=0, status=transferred
[2026-01-09 23:47:57] 2026-01-09 14:47:06,767 | INFO     | stage-out finished correctly
[2026-01-09 23:47:57] 2026-01-09 14:47:07,719 | INFO     | PID=2509198 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 23:47:57] 2026-01-09 14:47:07,719 | INFO     | .. there are 3 such processes running
[2026-01-09 23:47:57] 2026-01-09 14:47:08,118 | INFO     | monitor loop #414: job 0:6963156830 is in state 'finished'
[2026-01-09 23:47:57] 2026-01-09 14:47:08,118 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 23:47:57] 2026-01-09 14:47:08,660 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-09 23:47:57] 2026-01-09 14:47:08,700 | INFO     | job 6963156830 has state=finished
[2026-01-09 23:47:57] 2026-01-09 14:47:08,700 | INFO     | preparing for final server update for job 6963156830 in state='finished'
[2026-01-09 23:47:57] 2026-01-09 14:47:08,700 | INFO     | this job has now completed (state=finished)
[2026-01-09 23:47:57] 2026-01-09 14:47:08,700 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-09 23:47:57] 2026-01-09 14:47:08,700 | INFO     | log transfer has been attempted: DONE
[2026-01-09 23:47:57] 2026-01-09 14:47:08,700 | INFO     | job 6963156830 has finished - writing final server update
[2026-01-09 23:47:57] 2026-01-09 14:47:08,700 | INFO     | total number of processed events: 400 (read)
[2026-01-09 23:47:57] 2026-01-09 14:47:08,701 | INFO     | executing command: lscpu
[2026-01-09 23:47:57] 2026-01-09 14:47:08,711 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 23:47:57] 2026-01-09 14:47:08,719 | INFO     | time since job start (5667s) is within the limit (349056.0s)
[2026-01-09 23:47:57] 2026-01-09 14:47:10,621 | INFO     | monitor loop #415: job 0:6963156830 is in state 'finished'
[2026-01-09 23:47:57] 2026-01-09 14:47:10,621 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 23:47:57] 2026-01-09 14:47:10,724 | INFO     | time since job start (5669s) is within the limit (349056.0s)
[2026-01-09 23:47:57] 2026-01-09 14:47:10,792 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 23:47:57] 2026-01-09 14:47:10,794 | INFO     | found 12 cores (12 cores per socket, 1 socket) , CPU MHz: 4279.98695
[2026-01-09 23:47:57] 2026-01-09 14:47:10,796 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6963156830/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 23:47:57] 2026-01-09 14:47:10,796 | INFO     | extracted standard info from prmon json
[2026-01-09 23:47:57] 2026-01-09 14:47:10,796 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 23:47:57] 2026-01-09 14:47:10,796 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 23:47:57] 2026-01-09 14:47:10,796 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 23:47:57] 2026-01-09 14:47:10,796 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 23:47:57] 2026-01-09 14:47:10,797 | INFO     | fitting pss+swap vs Time
[2026-01-09 23:47:57] 2026-01-09 14:47:10,797 | INFO     | sum of square deviations: 197203697.5
[2026-01-09 23:47:57] 2026-01-09 14:47:10,798 | INFO     | sum of deviations: -6090088079.5
[2026-01-09 23:47:57] 2026-01-09 14:47:10,798 | INFO     | mean x: 1767967277.5
[2026-01-09 23:47:57] 2026-01-09 14:47:10,798 | INFO     | mean y: 2522828.918604651
[2026-01-09 23:47:57] 2026-01-09 14:47:10,798 | INFO     | intersect: 54601278218.12128
[2026-01-09 23:47:57] 2026-01-09 14:47:10,798 | INFO     | chi2: 0.04612018526081915
[2026-01-09 23:47:57] 2026-01-09 14:47:10,798 | INFO     | current memory leak: -30.88 B/s (using 86 data points, chi2=0.05)
[2026-01-09 23:47:57] 2026-01-09 14:47:10,798 | INFO     | could have reported an average CPU frequency of 3299 MHz (7 samples)
[2026-01-09 23:47:57] 2026-01-09 14:47:10,798 | INFO     | ..............................
[2026-01-09 23:47:57] 2026-01-09 14:47:10,798 | INFO     | . Timing measurements:
[2026-01-09 23:47:57] 2026-01-09 14:47:10,798 | INFO     | . get job = 0 s
[2026-01-09 23:47:57] 2026-01-09 14:47:10,798 | INFO     | . initial setup = 4 s
[2026-01-09 23:47:57] 2026-01-09 14:47:10,798 | INFO     | . payload setup = 2 s
[2026-01-09 23:47:57] 2026-01-09 14:47:10,798 | INFO     | . stage-in = 0 s
[2026-01-09 23:47:57] 2026-01-09 14:47:10,798 | INFO     | . payload execution = 5643 s
[2026-01-09 23:47:57] 2026-01-09 14:47:10,798 | INFO     | . stage-out = 0 s
[2026-01-09 23:47:57] 2026-01-09 14:47:10,798 | INFO     | . log creation = 0 s
[2026-01-09 23:47:57] 2026-01-09 14:47:10,798 | INFO     | ..............................
[2026-01-09 23:47:57] 2026-01-09 14:47:10,840 | INFO     | 
[2026-01-09 23:47:57] 2026-01-09 14:47:10,841 | INFO     | job summary report
[2026-01-09 23:47:57] 2026-01-09 14:47:10,841 | INFO     | --------------------------------------------------
[2026-01-09 23:47:57] 2026-01-09 14:47:10,841 | INFO     | PanDA job id: 6963156830
[2026-01-09 23:47:57] 2026-01-09 14:47:10,841 | INFO     | task id: 47898826
[2026-01-09 23:47:57] 2026-01-09 14:47:10,841 | INFO     | errors: (none)
[2026-01-09 23:47:57] 2026-01-09 14:47:10,841 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 23:47:57] 2026-01-09 14:47:10,841 | INFO     | pilot state: finished 
[2026-01-09 23:47:57] 2026-01-09 14:47:10,841 | INFO     | transexitcode: 0
[2026-01-09 23:47:57] 2026-01-09 14:47:10,841 | INFO     | exeerrorcode: 0
[2026-01-09 23:47:57] 2026-01-09 14:47:10,841 | INFO     | exeerrordiag: 
[2026-01-09 23:47:57] 2026-01-09 14:47:10,841 | INFO     | exitcode: 0
[2026-01-09 23:47:57] 2026-01-09 14:47:10,841 | INFO     | exitmsg: OK
[2026-01-09 23:47:57] 2026-01-09 14:47:10,841 | INFO     | cpuconsumptiontime: 30974 s
[2026-01-09 23:47:57] 2026-01-09 14:47:10,841 | INFO     | nevents: 400
[2026-01-09 23:47:57] 2026-01-09 14:47:10,841 | INFO     | neventsw: 0
[2026-01-09 23:47:57] 2026-01-09 14:47:10,841 | INFO     | pid: 2515925
[2026-01-09 23:47:57] 2026-01-09 14:47:10,841 | INFO     | pgrp: 2515925
[2026-01-09 23:47:57] 2026-01-09 14:47:10,841 | INFO     | corecount: 6
[2026-01-09 23:47:57] 2026-01-09 14:47:10,841 | INFO     | event service: False
[2026-01-09 23:47:57] 2026-01-09 14:47:10,841 | INFO     | sizes: {0: 2283971, 3: 2284233, 10: 2284261, 5648: 2310901, 5649: 2310900, 5651: 2319954, 5653: 2320138, 5655: 2320332}
[2026-01-09 23:47:57] 2026-01-09 14:47:10,841 | INFO     | --------------------------------------------------
[2026-01-09 23:47:57] 2026-01-09 14:47:10,841 | INFO     | 
[2026-01-09 23:47:57] 2026-01-09 14:47:10,841 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2026-01-09 23:47:57] 2026-01-09 14:47:10,850 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 23:47:57] 2026-01-09 14:47:10,850 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 23:47:57] 2026-01-09 14:47:10,850 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 23:47:57] 2026-01-09 14:47:10,850 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 23:47:57] 2026-01-09 14:47:10,850 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 23:47:57] 2026-01-09 14:47:10,850 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 23:47:57] 2026-01-09 14:47:10,850 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 23:47:57] 2026-01-09 14:47:10,850 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 23:47:57] 2026-01-09 14:47:10,850 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 23:47:57] 2026-01-09 14:47:10,850 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 23:47:57] 2026-01-09 14:47:10,850 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 23:47:57] 2026-01-09 14:47:10,850 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 23:47:57] 2026-01-09 14:47:10,850 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 23:47:57] 2026-01-09 14:47:10,850 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 23:47:57] 2026-01-09 14:47:10,850 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 23:47:57] 2026-01-09 14:47:10,850 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 23:47:57] 2026-01-09 14:47:10,850 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 23:47:57] 2026-01-09 14:47:10,850 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 23:47:57] 2026-01-09 14:47:10,850 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 23:47:57] 2026-01-09 14:47:10,850 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 23:47:57] 2026-01-09 14:47:10,850 | INFO     | job 6963156830 has completed (purged errors)
[2026-01-09 23:47:57] 2026-01-09 14:47:10,850 | INFO     | overall cleanup function is called
[2026-01-09 23:47:57] 2026-01-09 14:47:11,856 | INFO     | --- collectZombieJob: --- 10, [2515925]
[2026-01-09 23:47:57] 2026-01-09 14:47:11,856 | INFO     | zombie collector waiting for pid 2515925
[2026-01-09 23:47:57] 2026-01-09 14:47:11,856 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 23:47:57] 2026-01-09 14:47:11,856 | INFO     | collected zombie processes
[2026-01-09 23:47:57] 2026-01-09 14:47:11,856 | INFO     | will attempt to kill all subprocesses of pid=2515925
[2026-01-09 23:47:57] 2026-01-09 14:47:11,891 | INFO     | process IDs to be killed: [2515925] (in reverse order)
[2026-01-09 23:47:57] 2026-01-09 14:47:11,911 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 23:47:57] 2026-01-09 14:47:11,911 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 23:47:57] 2026-01-09 14:47:11,913 | INFO     | did not find any defunct processes belonging to 2515925
[2026-01-09 23:47:57] 2026-01-09 14:47:11,915 | INFO     | did not find any defunct processes belonging to 2515925
[2026-01-09 23:47:57] 2026-01-09 14:47:11,915 | INFO     | ready for new job
[2026-01-09 23:47:57] 2026-01-09 14:47:11,915 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 23:47:57] 2026-01-09 14:47:11,916 | INFO     | ***************************************
[2026-01-09 23:47:57] 2026-01-09 14:47:11,916 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 23:47:57] 2026-01-09 14:47:11,916 | INFO     | ***************************************
[2026-01-09 23:47:57] 2026-01-09 14:47:11,916 | INFO     | 
[2026-01-09 23:47:57] 2026-01-09 14:47:11,916 | INFO     | architecture information:
[2026-01-09 23:47:57] 2026-01-09 14:47:11,916 | INFO     | executing command: cat /etc/os-release
[2026-01-09 23:47:57] 2026-01-09 14:47:11,923 | INFO     | cat /etc/os-release:
[2026-01-09 23:47:57] NAME="CentOS Linux"
[2026-01-09 23:47:57] VERSION="7 (Core)"
[2026-01-09 23:47:57] ID="centos"
[2026-01-09 23:47:57] ID_LIKE="rhel fedora"
[2026-01-09 23:47:57] VERSION_ID="7"
[2026-01-09 23:47:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 23:47:57] ANSI_COLOR="0;31"
[2026-01-09 23:47:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 23:47:57] HOME_URL="https://www.centos.org/"
[2026-01-09 23:47:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 23:47:57] 
[2026-01-09 23:47:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 23:47:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 23:47:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 23:47:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 23:47:57] 
[2026-01-09 23:47:57] 2026-01-09 14:47:11,924 | INFO     | ***************************************
[2026-01-09 23:47:57] 2026-01-09 14:47:12,426 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2026-01-09 23:47:57] 2026-01-09 14:47:12,434 | INFO     | sufficient remaining disk space (279233691648 B)
[2026-01-09 23:47:57] 2026-01-09 14:47:12,434 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 23:47:57] 2026-01-09 14:47:12,434 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 23:47:57] 2026-01-09 14:47:12,434 | INFO     | update_server=False
[2026-01-09 23:47:57] 2026-01-09 14:47:12,434 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 23:47:57] 2026-01-09 14:47:12,434 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 23:47:57] 2026-01-09 14:47:12,434 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-09 23:47:57] 2026-01-09 14:47:12,434 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 23:47:57] 2026-01-09 14:47:12,434 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 23:47:57] 2026-01-09 14:47:12,434 | INFO     | aborting loop
[2026-01-09 23:47:57] 2026-01-09 14:47:12,435 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 23:47:57] 2026-01-09 14:47:12,435 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 23:47:57] 2026-01-09 14:47:12,435 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 23:47:57] 2026-01-09 14:47:12,534 | INFO     | all job control threads have been joined
[2026-01-09 23:47:57] 2026-01-09 14:47:13,036 | INFO     | all data control threads have been joined
[2026-01-09 23:47:57] 2026-01-09 14:47:13,439 | INFO     | [job] retrieve thread has finished
[2026-01-09 23:47:57] 2026-01-09 14:47:13,439 | INFO     | [job] job monitor thread has finished
[2026-01-09 23:47:57] 2026-01-09 14:47:13,440 | INFO     | [job] queue monitor thread has finished
[2026-01-09 23:47:57] 2026-01-09 14:47:13,539 | INFO     | [job] control thread has finished
[2026-01-09 23:47:57] 2026-01-09 14:47:13,819 | INFO     | all payload control threads have been joined
[2026-01-09 23:47:57] 2026-01-09 14:47:13,969 | INFO     | [payload] validate_post thread has finished
[2026-01-09 23:47:57] 2026-01-09 14:47:13,988 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 23:47:57] 2026-01-09 14:47:14,038 | INFO     | [job] validate thread has finished
[2026-01-09 23:47:57] 2026-01-09 14:47:14,041 | INFO     | [data] control thread has finished
[2026-01-09 23:47:57] 2026-01-09 14:47:14,060 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 23:47:57] 2026-01-09 14:47:14,439 | INFO     | [data] copytool_out thread has finished
[2026-01-09 23:47:57] 2026-01-09 14:47:14,490 | INFO     | [data] copytool_in thread has finished
[2026-01-09 23:47:57] 2026-01-09 14:47:14,558 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 23:47:57] 2026-01-09 14:47:14,705 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 23:47:57] 2026-01-09 14:47:14,824 | INFO     | [payload] control thread has finished
[2026-01-09 23:47:57] 2026-01-09 14:47:14,897 | INFO     | [payload] failed_post thread has finished
[2026-01-09 23:47:57] 2026-01-09 14:47:18,710 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 23:47:57] 2026-01-09 14:47:23,023 | INFO     | job.realtimelogging is not enabled
[2026-01-09 23:47:57] 2026-01-09 14:47:24,028 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 23:47:57] 2026-01-09 14:47:50,520 | INFO     | [monitor] cgroup control has ended
[2026-01-09 23:47:57] 2026-01-09 14:47:52,295 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140092022368064)>', '<ExcThread(monitor, started 140091498428160)>']
[2026-01-09 23:47:57] 2026-01-09 14:47:52,634 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 23:47:57] 2026-01-09 14:47:52,634 | INFO     | [monitor] control thread has ended
[2026-01-09 23:47:57] 2026-01-09 14:47:57,321 | INFO     | all workflow threads have been joined
[2026-01-09 23:47:57] 2026-01-09 14:47:57,321 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 23:47:57] 2026-01-09 14:47:57,322 | INFO     | traces error code: 0
[2026-01-09 23:47:57] 2026-01-09 14:47:57,322 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 23:47:57] 2026-01-09 14:47:57,405 [wrapper] ==== pilot stdout END ====
[2026-01-09 23:47:57] 2026-01-09 14:47:57,407 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 23:47:57] 2026-01-09 14:47:57,409 [wrapper] pilotpid: 2509198
[2026-01-09 23:47:57] 2026-01-09 14:47:57,411 [wrapper] Pilot exit status: 0
[2026-01-09 23:47:57] 2026-01-09 14:47:57,418 [wrapper] pandaids: 6963156830
[2026-01-09 23:47:57] 2026-01-09 14:47:57,437 [wrapper] cleanup supervisor_pilot 2580763 2509199
[2026-01-09 23:47:57] 2026-01-09 14:47:57,439 [wrapper] Test setup, not cleaning
[2026-01-09 23:47:57] 2026-01-09 14:47:57,441 [wrapper] apfmon messages muted
[2026-01-09 23:47:57] 2026-01-09 14:47:57,443 [wrapper] ==== wrapper stdout END ====
[2026-01-09 23:47:57] 2026-01-09 14:47:57,445 [wrapper] ==== wrapper stderr END ====
[2026-01-09 23:47:57]  *** Error codes and diagnostics ***
[2026-01-09 23:47:57]     "exeErrorCode": 0,
[2026-01-09 23:47:57]     "exeErrorDiag": "",
[2026-01-09 23:47:57]     "pilotErrorCode": 0,
[2026-01-09 23:47:57]     "pilotErrorDiag": "",
[2026-01-09 23:47:57]  *** Listing of results directory ***
[2026-01-09 23:47:57] total 438716
[2026-01-09 23:47:57] -rw-r--r--. 1 boinc boinc    579449 Jan  9 06:44 pilot3.tar.gz
[2026-01-09 23:47:57] -rwx------. 1 boinc boinc     36322 Jan  9 06:45 runpilot2-wrapper.sh
[2026-01-09 23:47:57] -rw-r--r--. 1 boinc boinc      5112 Jan  9 06:45 queuedata.json
[2026-01-09 23:47:57] -rw-r--r--. 1 boinc boinc       100 Jan  9 22:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 23:47:57] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 22:12 run_atlas
[2026-01-09 23:47:57] -rw-r--r--. 1 boinc boinc       105 Jan  9 22:12 job.xml
[2026-01-09 23:47:57] -rw-r--r--. 2 boinc boinc     15847 Jan  9 22:12 start_atlas.sh
[2026-01-09 23:47:57] drwxrwx--x. 2 boinc boinc        68 Jan  9 22:12 shared
[2026-01-09 23:47:57] -rw-r--r--. 2 boinc boinc    592397 Jan  9 22:12 input.tar.gz
[2026-01-09 23:47:57] -rw-r--r--. 1 boinc boinc      9525 Jan  9 22:12 init_data.xml
[2026-01-09 23:47:57] -rw-r--r--. 2 boinc boinc 224574468 Jan  9 22:12 EVNT.47898824._001215.pool.root.1
[2026-01-09 23:47:57] -rw-r--r--. 1 boinc boinc         0 Jan  9 22:12 boinc_lockfile
[2026-01-09 23:47:57] -rw-r--r--. 1 boinc boinc      2520 Jan  9 22:12 pandaJob.out
[2026-01-09 23:47:57] -rw-------. 1 boinc boinc    989377 Jan  9 22:12 agis_schedconf.cvmfs.json
[2026-01-09 23:47:57] -rw-------. 1 boinc boinc   1516240 Jan  9 22:12 agis_ddmendpoints.agis.ALL.json
[2026-01-09 23:47:57] drwx------. 5 boinc boinc      4096 Jan  9 22:12 pilot3
[2026-01-09 23:47:57] -rw-------. 1 boinc boinc        95 Jan  9 23:46 pilot_heartbeat.json
[2026-01-09 23:47:57] -rw-r--r--. 1 boinc boinc       529 Jan  9 23:46 boinc_task_state.xml
[2026-01-09 23:47:57] -rw-------. 1 boinc boinc 218516868 Jan  9 23:46 HITS.47898826._031979.pool.root.1
[2026-01-09 23:47:57] -rw-------. 1 boinc boinc      1028 Jan  9 23:47 memory_monitor_summary.json
[2026-01-09 23:47:57] -rw-------. 1 boinc boinc    299672 Jan  9 23:47 log.47898826._031979.job.log.tgz.1
[2026-01-09 23:47:57] -rw-------. 1 boinc boinc      7760 Jan  9 23:47 heartbeat.json
[2026-01-09 23:47:57] -rw-r--r--. 1 boinc boinc        27 Jan  9 23:47 wrapper_checkpoint.txt
[2026-01-09 23:47:57] -rw-r--r--. 1 boinc boinc      8192 Jan  9 23:47 boinc_mmap_file
[2026-01-09 23:47:57] -rw-------. 1 boinc boinc      4625 Jan  9 23:47 pilotlog.txt
[2026-01-09 23:47:57] -rw-------. 1 boinc boinc    823789 Jan  9 23:47 log.47898826._031979.job.log.1
[2026-01-09 23:47:57] -rw-------. 1 boinc boinc       357 Jan  9 23:47 output.list
[2026-01-09 23:47:57] -rw-r--r--. 1 boinc boinc       620 Jan  9 23:47 runtime_log
[2026-01-09 23:47:57] -rw-------. 1 boinc boinc   1146880 Jan  9 23:47 result.tar.gz
[2026-01-09 23:47:57] -rw-r--r--. 1 boinc boinc      8775 Jan  9 23:47 runtime_log.err
[2026-01-09 23:47:57] -rw-------. 1 boinc boinc       643 Jan  9 23:47 IdqKDmP0Cy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmeBgKDmCk6lHn.diag
[2026-01-09 23:47:57] -rw-r--r--. 1 boinc boinc     21374 Jan  9 23:47 stderr.txt
[2026-01-09 23:47:57] HITS file was successfully produced:
[2026-01-09 23:47:57] -rw-------. 1 boinc boinc 218516868 Jan  9 23:46 shared/HITS.pool.root.1
[2026-01-09 23:47:57]  *** Contents of shared directory: ***
[2026-01-09 23:47:57] total 434424
[2026-01-09 23:47:57] -rw-r--r--. 2 boinc boinc     15847 Jan  9 22:12 start_atlas.sh
[2026-01-09 23:47:57] -rw-r--r--. 2 boinc boinc    592397 Jan  9 22:12 input.tar.gz
[2026-01-09 23:47:57] -rw-r--r--. 2 boinc boinc 224574468 Jan  9 22:12 ATLAS.root_0
[2026-01-09 23:47:57] -rw-------. 1 boinc boinc 218516868 Jan  9 23:46 HITS.pool.root.1
[2026-01-09 23:47:57] -rw-------. 1 boinc boinc   1146880 Jan  9 23:47 result.tar.gz
23:47:58 (2505422): run_atlas exited; CPU time 31018.160431
23:47:58 (2505422): called boinc_finish(0)

</stderr_txt>
]]>

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