Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:46:52 (6137): wrapper (7.7.26015): starting
13:46:52 (6137): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 13:46:52] Arguments: --nthreads 8
[2026-01-09 13:46:52] Threads: 8
[2026-01-09 13:46:52] Checking for CVMFS
[2026-01-09 13:46:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 13:46:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 13:46:53] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 13:46:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 13:46:53] 2.11.2.0 4234 35434 99616 154944 1 56 14992310 25165824 0 130560 0 16106034 99.869 8061923 3154 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 13:46:53] CVMFS is ok
[2026-01-09 13:46:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 13:46:53] Checking for apptainer binary...
[2026-01-09 13:46:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 13:46:53] Running /usr/bin/apptainer --version
[2026-01-09 13:46:53] apptainer version 1.3.2-1.el7
[2026-01-09 13:46:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 13:46:54] cg-vwn359.simple-grid.lan
[2026-01-09 13:46:54] apptainer works
[2026-01-09 13:46:54] Set ATHENA_PROC_NUMBER=8
[2026-01-09 13:46:54] Set ATHENA_CORE_NUMBER=8
[2026-01-09 13:46:54] Starting ATLAS job with PandaID=6963146104
[2026-01-09 13:46:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 16:34:34]  *** The last 200 lines of the pilot log: ***
[2026-01-09 16:34:34] 2026-01-09 15:33:53,108 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 16:34:34] 2026-01-09 15:33:53,109 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 16:34:34] 2026-01-09 15:33:53,111 | INFO     | using path: /var/lib/boinc/slots/14/PanDA_Pilot-6963146104/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 16:34:34] 2026-01-09 15:33:53,111 | INFO     | extracted standard info from prmon json
[2026-01-09 16:34:34] 2026-01-09 15:33:53,112 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 16:34:34] 2026-01-09 15:33:53,112 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 16:34:34] 2026-01-09 15:33:53,112 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 16:34:34] 2026-01-09 15:33:53,112 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 16:34:34] 2026-01-09 15:33:53,116 | INFO     | fitting pss+swap vs Time
[2026-01-09 16:34:34] 2026-01-09 15:33:53,116 | INFO     | sum of square deviations: 1367709365.0
[2026-01-09 16:34:34] 2026-01-09 15:33:53,117 | INFO     | sum of deviations: -2638934816.500002
[2026-01-09 16:34:34] 2026-01-09 15:33:53,118 | INFO     | mean x: 1767967838.5
[2026-01-09 16:34:34] 2026-01-09 15:33:53,118 | INFO     | mean y: 2488999.0670731706
[2026-01-09 16:34:34] 2026-01-09 15:33:53,118 | INFO     | intersect: 3413704863.2429414
[2026-01-09 16:34:34] 2026-01-09 15:33:53,118 | INFO     | chi2: 2.406028369656056
[2026-01-09 16:34:34] 2026-01-09 15:33:53,118 | INFO     | sum of square deviations: 1246386160.0
[2026-01-09 16:34:34] 2026-01-09 15:33:53,120 | INFO     | sum of deviations: 8145282114.999996
[2026-01-09 16:34:34] 2026-01-09 15:33:53,120 | INFO     | mean x: 1767967686.0
[2026-01-09 16:34:34] 2026-01-09 15:33:53,120 | INFO     | mean y: 2502218.4150943398
[2026-01-09 16:34:34] 2026-01-09 15:33:53,120 | INFO     | intersect: -11551377337.399075
[2026-01-09 16:34:34] 2026-01-09 15:33:53,120 | INFO     | chi2: 1.643908927281093
[2026-01-09 16:34:34] 2026-01-09 15:33:53,120 | INFO     | current chi2=1.643908927281093 (change=31.675413805860853 %)
[2026-01-09 16:34:34] 2026-01-09 15:33:53,121 | INFO     | sum of square deviations: 1132458442.5
[2026-01-09 16:34:34] 2026-01-09 15:33:53,122 | INFO     | sum of deviations: 7906556724.0
[2026-01-09 16:34:34] 2026-01-09 15:33:53,122 | INFO     | mean x: 1767967533.5
[2026-01-09 16:34:34] 2026-01-09 15:33:53,122 | INFO     | mean y: 2501898.8441558443
[2026-01-09 16:34:34] 2026-01-09 15:33:53,122 | INFO     | intersect: -12341028835.00714
[2026-01-09 16:34:34] 2026-01-09 15:33:53,123 | INFO     | chi2: 1.6452335211308233
[2026-01-09 16:34:34] 2026-01-09 15:33:53,123 | INFO     | current chi2=1.6452335211308233 (change=-0.08057586571545451 %)
[2026-01-09 16:34:34] 2026-01-09 15:33:53,123 | INFO     | right removable region: 153
[2026-01-09 16:34:34] 2026-01-09 15:33:53,123 | INFO     | sum of square deviations: 1246386160.0
[2026-01-09 16:34:34] 2026-01-09 15:33:53,124 | INFO     | sum of deviations: -27180341570.0
[2026-01-09 16:34:34] 2026-01-09 15:33:53,124 | INFO     | mean x: 1767967991.0
[2026-01-09 16:34:34] 2026-01-09 15:33:53,124 | INFO     | mean y: 2519403.452830189
[2026-01-09 16:34:34] 2026-01-09 15:33:53,125 | INFO     | intersect: 38557162757.48902
[2026-01-09 16:34:34] 2026-01-09 15:33:53,125 | INFO     | chi2: 0.9418500467795122
[2026-01-09 16:34:34] 2026-01-09 15:33:53,125 | INFO     | current chi2=0.9418500467795122 (change=60.85457434094385 %)
[2026-01-09 16:34:34] 2026-01-09 15:33:53,126 | INFO     | sum of square deviations: 1132458442.5
[2026-01-09 16:34:34] 2026-01-09 15:33:53,127 | INFO     | sum of deviations: -28346984229.5
[2026-01-09 16:34:34] 2026-01-09 15:33:53,127 | INFO     | mean x: 1767968143.5
[2026-01-09 16:34:34] 2026-01-09 15:33:53,127 | INFO     | mean y: 2520919.0844155843
[2026-01-09 16:34:34] 2026-01-09 15:33:53,127 | INFO     | intersect: 44257182460.05562
[2026-01-09 16:34:34] 2026-01-09 15:33:53,127 | INFO     | chi2: 0.9197040745526643
[2026-01-09 16:34:34] 2026-01-09 15:33:53,128 | INFO     | current chi2=0.9197040745526643 (change=2.3513267640185482 %)
[2026-01-09 16:34:34] 2026-01-09 15:33:53,128 | INFO     | left removable region: 20
[2026-01-09 16:34:34] 2026-01-09 15:33:53,128 | INFO     | sum of square deviations: 729472282.0
[2026-01-09 16:34:34] 2026-01-09 15:33:53,129 | INFO     | sum of deviations: -7794286285.000002
[2026-01-09 16:34:34] 2026-01-09 15:33:53,129 | INFO     | mean x: 1767968113.0
[2026-01-09 16:34:34] 2026-01-09 15:33:53,129 | INFO     | mean y: 2521540.7819548873
[2026-01-09 16:34:34] 2026-01-09 15:33:53,129 | INFO     | intersect: 18892957758.16963
[2026-01-09 16:34:34] 2026-01-09 15:33:53,130 | INFO     | chi2: 0.09070225329445776
[2026-01-09 16:34:34] 2026-01-09 15:33:53,130 | INFO     | current memory leak: -10.68 B/s (using 133 data points, chi2=0.09)
[2026-01-09 16:34:34] 2026-01-09 15:33:53,130 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-01-09 16:34:34] 2026-01-09 15:33:53,130 | INFO     | ..............................
[2026-01-09 16:34:34] 2026-01-09 15:33:53,131 | INFO     | . Timing measurements:
[2026-01-09 16:34:34] 2026-01-09 15:33:53,131 | INFO     | . get job = 0 s
[2026-01-09 16:34:34] 2026-01-09 15:33:53,131 | INFO     | . initial setup = 2 s
[2026-01-09 16:34:34] 2026-01-09 15:33:53,131 | INFO     | . payload setup = 8 s
[2026-01-09 16:34:34] 2026-01-09 15:33:53,131 | INFO     | . stage-in = 0 s
[2026-01-09 16:34:34] 2026-01-09 15:33:53,131 | INFO     | . payload execution = 9963 s
[2026-01-09 16:34:34] 2026-01-09 15:33:53,131 | INFO     | . stage-out = 1 s
[2026-01-09 16:34:34] 2026-01-09 15:33:53,131 | INFO     | . log creation = 0 s
[2026-01-09 16:34:34] 2026-01-09 15:33:53,131 | INFO     | ..............................
[2026-01-09 16:34:34] 2026-01-09 15:33:53,586 | INFO     | 
[2026-01-09 16:34:34] 2026-01-09 15:33:53,586 | INFO     | job summary report
[2026-01-09 16:34:34] 2026-01-09 15:33:53,587 | INFO     | --------------------------------------------------
[2026-01-09 16:34:34] 2026-01-09 15:33:53,587 | INFO     | PanDA job id: 6963146104
[2026-01-09 16:34:34] 2026-01-09 15:33:53,587 | INFO     | task id: 47898826
[2026-01-09 16:34:34] 2026-01-09 15:33:53,587 | INFO     | errors: (none)
[2026-01-09 16:34:34] 2026-01-09 15:33:53,587 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 16:34:34] 2026-01-09 15:33:53,587 | INFO     | pilot state: finished 
[2026-01-09 16:34:34] 2026-01-09 15:33:53,587 | INFO     | transexitcode: 0
[2026-01-09 16:34:34] 2026-01-09 15:33:53,588 | INFO     | exeerrorcode: 0
[2026-01-09 16:34:34] 2026-01-09 15:33:53,588 | INFO     | exeerrordiag: 
[2026-01-09 16:34:34] 2026-01-09 15:33:53,588 | INFO     | exitcode: 0
[2026-01-09 16:34:34] 2026-01-09 15:33:53,588 | INFO     | exitmsg: OK
[2026-01-09 16:34:34] 2026-01-09 15:33:53,588 | INFO     | cpuconsumptiontime: 74186 s
[2026-01-09 16:34:34] 2026-01-09 15:33:53,588 | INFO     | nevents: 400
[2026-01-09 16:34:34] 2026-01-09 15:33:53,588 | INFO     | neventsw: 0
[2026-01-09 16:34:34] 2026-01-09 15:33:53,588 | INFO     | pid: 16311
[2026-01-09 16:34:34] 2026-01-09 15:33:53,589 | INFO     | pgrp: 16311
[2026-01-09 16:34:34] 2026-01-09 15:33:53,589 | INFO     | corecount: 8
[2026-01-09 16:34:34] 2026-01-09 15:33:53,589 | INFO     | event service: False
[2026-01-09 16:34:34] 2026-01-09 15:33:53,589 | INFO     | sizes: {0: 2283970, 1: 2283970, 6: 2284260, 12: 2284288, 9975: 2312632, 9976: 2312631, 9978: 2321871, 9984: 2322073}
[2026-01-09 16:34:34] 2026-01-09 15:33:53,589 | INFO     | --------------------------------------------------
[2026-01-09 16:34:34] 2026-01-09 15:33:53,589 | INFO     | 
[2026-01-09 16:34:34] 2026-01-09 15:33:53,590 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2026-01-09 16:34:34] 2026-01-09 15:33:53,628 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 16:34:34] 2026-01-09 15:33:53,629 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 16:34:34] 2026-01-09 15:33:53,629 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 16:34:34] 2026-01-09 15:33:53,629 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 16:34:34] 2026-01-09 15:33:53,629 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 16:34:34] 2026-01-09 15:33:53,629 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 16:34:34] 2026-01-09 15:33:53,629 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 16:34:34] 2026-01-09 15:33:53,629 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 16:34:34] 2026-01-09 15:33:53,630 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 16:34:34] 2026-01-09 15:33:53,630 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 16:34:34] 2026-01-09 15:33:53,630 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 16:34:34] 2026-01-09 15:33:53,630 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 16:34:34] 2026-01-09 15:33:53,631 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 16:34:34] 2026-01-09 15:33:53,631 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 16:34:34] 2026-01-09 15:33:53,631 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 16:34:34] 2026-01-09 15:33:53,631 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 16:34:34] 2026-01-09 15:33:53,631 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 16:34:34] 2026-01-09 15:33:53,631 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 16:34:34] 2026-01-09 15:33:53,632 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 16:34:34] 2026-01-09 15:33:53,632 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 16:34:34] 2026-01-09 15:33:53,632 | INFO     | job 6963146104 has completed (purged errors)
[2026-01-09 16:34:34] 2026-01-09 15:33:53,632 | INFO     | overall cleanup function is called
[2026-01-09 16:34:34] 2026-01-09 15:33:53,681 | INFO     | PID=9865 has CPU usage=8.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-09 16:34:34] 2026-01-09 15:33:54,642 | INFO     | --- collectZombieJob: --- 10, [16311]
[2026-01-09 16:34:34] 2026-01-09 15:33:54,642 | INFO     | zombie collector waiting for pid 16311
[2026-01-09 16:34:34] 2026-01-09 15:33:54,643 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 16:34:34] 2026-01-09 15:33:54,643 | INFO     | collected zombie processes
[2026-01-09 16:34:34] 2026-01-09 15:33:54,643 | INFO     | will attempt to kill all subprocesses of pid=16311
[2026-01-09 16:34:34] 2026-01-09 15:33:54,699 | INFO     | process IDs to be killed: [16311] (in reverse order)
[2026-01-09 16:34:34] 2026-01-09 15:33:54,745 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 16:34:34] 2026-01-09 15:33:54,745 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 16:34:34] 2026-01-09 15:33:54,747 | INFO     | did not find any defunct processes belonging to 16311
[2026-01-09 16:34:34] 2026-01-09 15:33:54,749 | INFO     | did not find any defunct processes belonging to 16311
[2026-01-09 16:34:34] 2026-01-09 15:33:54,749 | INFO     | ready for new job
[2026-01-09 16:34:34] 2026-01-09 15:33:54,749 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 16:34:34] 2026-01-09 15:33:54,751 | INFO     | ***************************************
[2026-01-09 16:34:34] 2026-01-09 15:33:54,751 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 16:34:34] 2026-01-09 15:33:54,752 | INFO     | ***************************************
[2026-01-09 16:34:34] 2026-01-09 15:33:54,752 | INFO     | 
[2026-01-09 16:34:34] 2026-01-09 15:33:54,752 | INFO     | pilot is running in a VM
[2026-01-09 16:34:34] 2026-01-09 15:33:54,753 | INFO     | architecture information:
[2026-01-09 16:34:34] 2026-01-09 15:33:54,753 | INFO     | executing command: cat /etc/os-release
[2026-01-09 16:34:34] 2026-01-09 15:33:54,771 | INFO     | cat /etc/os-release:
[2026-01-09 16:34:34] NAME="CentOS Linux"
[2026-01-09 16:34:34] VERSION="7 (Core)"
[2026-01-09 16:34:34] ID="centos"
[2026-01-09 16:34:34] ID_LIKE="rhel fedora"
[2026-01-09 16:34:34] VERSION_ID="7"
[2026-01-09 16:34:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 16:34:34] ANSI_COLOR="0;31"
[2026-01-09 16:34:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 16:34:34] HOME_URL="https://www.centos.org/"
[2026-01-09 16:34:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 16:34:34] 
[2026-01-09 16:34:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 16:34:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 16:34:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 16:34:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 16:34:34] 
[2026-01-09 16:34:34] 2026-01-09 15:33:54,771 | INFO     | ***************************************
[2026-01-09 16:34:34] 2026-01-09 15:33:55,275 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2026-01-09 16:34:34] 2026-01-09 15:33:55,297 | INFO     | sufficient remaining disk space (498113445888 B)
[2026-01-09 16:34:34] 2026-01-09 15:33:55,297 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 16:34:34] 2026-01-09 15:33:55,297 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 16:34:34] 2026-01-09 15:33:55,297 | INFO     | update_server=False
[2026-01-09 16:34:34] 2026-01-09 15:33:55,297 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 16:34:34] 2026-01-09 15:33:55,298 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 16:34:34] 2026-01-09 15:33:55,298 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 16:34:34] 2026-01-09 15:33:55,298 | INFO     | aborting loop
[2026-01-09 16:34:34] 2026-01-09 15:33:55,356 | INFO     | all payload control threads have been joined
[2026-01-09 16:34:34] 2026-01-09 15:33:55,644 | INFO     | all job control threads have been joined
[2026-01-09 16:34:34] 2026-01-09 15:33:56,166 | INFO     | all data control threads have been joined
[2026-01-09 16:34:34] 2026-01-09 15:33:56,303 | INFO     | [job] retrieve thread has finished
[2026-01-09 16:34:34] 2026-01-09 15:33:56,304 | INFO     | [job] job monitor thread has finished
[2026-01-09 16:34:34] 2026-01-09 15:33:56,362 | INFO     | [payload] control thread has finished
[2026-01-09 16:34:34] 2026-01-09 15:33:56,417 | INFO     | [job] validate thread has finished
[2026-01-09 16:34:34] 2026-01-09 15:33:56,650 | INFO     | [job] control thread has finished
[2026-01-09 16:34:34] 2026-01-09 15:33:56,790 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 16:34:34] 2026-01-09 15:33:57,110 | INFO     | [data] copytool_in thread has finished
[2026-01-09 16:34:34] 2026-01-09 15:33:57,172 | INFO     | [data] control thread has finished
[2026-01-09 16:34:34] 2026-01-09 15:33:57,191 | INFO     | [payload] failed_post thread has finished
[2026-01-09 16:34:34] 2026-01-09 15:33:57,220 | INFO     | [payload] validate_post thread has finished
[2026-01-09 16:34:34] 2026-01-09 15:33:57,304 | INFO     | [data] copytool_out thread has finished
[2026-01-09 16:34:34] 2026-01-09 15:33:57,328 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 16:34:34] 2026-01-09 15:33:57,334 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 16:34:34] 2026-01-09 15:33:57,601 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 16:34:34] 2026-01-09 15:33:58,253 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 16:34:34] 2026-01-09 15:33:59,256 | INFO     | [job] queue monitor thread has finished
[2026-01-09 16:34:34] 2026-01-09 15:34:01,334 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 16:34:34] 2026-01-09 15:34:05,862 | INFO     | job.realtimelogging is not enabled
[2026-01-09 16:34:34] 2026-01-09 15:34:06,868 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 16:34:34] 2026-01-09 15:34:25,770 | INFO     | PID=9865 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-09 16:34:34] 2026-01-09 15:34:25,771 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 16:34:34] 2026-01-09 15:34:25,771 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 16:34:34] 2026-01-09 15:34:25,771 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 16:34:34] 2026-01-09 15:34:27,362 | INFO     | [monitor] cgroup control has ended
[2026-01-09 16:34:34] 2026-01-09 15:34:29,210 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140155396376384)>', '<ExcThread(monitor, started 140154446542592)>']
[2026-01-09 16:34:34] 2026-01-09 15:34:29,792 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 16:34:34] 2026-01-09 15:34:29,793 | INFO     | [monitor] control thread has ended
[2026-01-09 16:34:34] 2026-01-09 15:34:34,219 | INFO     | all workflow threads have been joined
[2026-01-09 16:34:34] 2026-01-09 15:34:34,219 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 16:34:34] 2026-01-09 15:34:34,219 | INFO     | traces error code: 0
[2026-01-09 16:34:34] 2026-01-09 15:34:34,220 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 16:34:34] 2026-01-09 15:34:34,360 [wrapper] ==== pilot stdout END ====
[2026-01-09 16:34:34] 2026-01-09 15:34:34,371 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 16:34:34] 2026-01-09 15:34:34,379 [wrapper] pilotpid: 9865
[2026-01-09 16:34:34] 2026-01-09 15:34:34,387 [wrapper] Pilot exit status: 0
[2026-01-09 16:34:34] 2026-01-09 15:34:34,416 [wrapper] pandaids: 6963146104
[2026-01-09 16:34:34] 2026-01-09 15:34:34,450 [wrapper] cleanup supervisor_pilot  2805 9866
[2026-01-09 16:34:34] 2026-01-09 15:34:34,457 [wrapper] Test setup, not cleaning
[2026-01-09 16:34:34] 2026-01-09 15:34:34,463 [wrapper] apfmon messages muted
[2026-01-09 16:34:34] 2026-01-09 15:34:34,469 [wrapper] ==== wrapper stdout END ====
[2026-01-09 16:34:34] 2026-01-09 15:34:34,475 [wrapper] ==== wrapper stderr END ====
[2026-01-09 16:34:34]  *** Error codes and diagnostics ***
[2026-01-09 16:34:34]     "exeErrorCode": 0,
[2026-01-09 16:34:34]     "exeErrorDiag": "",
[2026-01-09 16:34:34]     "pilotErrorCode": 0,
[2026-01-09 16:34:34]     "pilotErrorDiag": "",
[2026-01-09 16:34:34]  *** Listing of results directory ***
[2026-01-09 16:34:34] total 437744
[2026-01-09 16:34:34] -rw-r--r--. 1 boinc boinc    579449 Jan  8 16:02 pilot3.tar.gz
[2026-01-09 16:34:34] -rwx------. 1 boinc boinc     36322 Jan  8 16:05 runpilot2-wrapper.sh
[2026-01-09 16:34:34] -rw-r--r--. 1 boinc boinc      5112 Jan  8 16:07 queuedata.json
[2026-01-09 16:34:34] -rw-r--r--. 1 boinc boinc       100 Jan  9 13:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 16:34:34] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 13:46 run_atlas
[2026-01-09 16:34:34] -rw-r--r--. 1 boinc boinc       105 Jan  9 13:46 job.xml
[2026-01-09 16:34:34] -rw-r--r--. 1 boinc boinc      6393 Jan  9 13:46 init_data.xml
[2026-01-09 16:34:34] -rw-r--r--. 2 boinc boinc 224440054 Jan  9 13:46 EVNT.47898824._001046.pool.root.1
[2026-01-09 16:34:34] -rw-r--r--. 2 boinc boinc     15847 Jan  9 13:46 start_atlas.sh
[2026-01-09 16:34:34] drwxrwx--x. 2 boinc boinc        68 Jan  9 13:46 shared
[2026-01-09 16:34:34] -rw-r--r--. 2 boinc boinc    592404 Jan  9 13:46 input.tar.gz
[2026-01-09 16:34:34] -rw-r--r--. 1 boinc boinc         0 Jan  9 13:46 boinc_lockfile
[2026-01-09 16:34:34] -rw-r--r--. 1 boinc boinc      2519 Jan  9 13:46 pandaJob.out
[2026-01-09 16:34:34] -rw-------. 1 boinc boinc    989377 Jan  9 13:47 agis_schedconf.cvmfs.json
[2026-01-09 16:34:34] -rw-------. 1 boinc boinc   1516240 Jan  9 13:47 agis_ddmendpoints.agis.ALL.json
[2026-01-09 16:34:34] drwx------. 5 boinc boinc      4096 Jan  9 13:47 pilot3
[2026-01-09 16:34:34] -rw-------. 1 boinc boinc 216426254 Jan  9 16:33 HITS.47898826._026534.pool.root.1
[2026-01-09 16:34:34] -rw-r--r--. 1 boinc boinc       530 Jan  9 16:33 boinc_task_state.xml
[2026-01-09 16:34:34] -rw-------. 1 boinc boinc      1015 Jan  9 16:33 memory_monitor_summary.json
[2026-01-09 16:34:34] -rw-------. 1 boinc boinc    398755 Jan  9 16:33 log.47898826._026534.job.log.tgz.1
[2026-01-09 16:34:34] -rw-------. 1 boinc boinc      7770 Jan  9 16:33 heartbeat.json
[2026-01-09 16:34:34] -rw-r--r--. 1 boinc boinc      8192 Jan  9 16:34 boinc_mmap_file
[2026-01-09 16:34:34] -rw-r--r--. 1 boinc boinc        28 Jan  9 16:34 wrapper_checkpoint.txt
[2026-01-09 16:34:34] -rw-------. 1 boinc boinc        95 Jan  9 16:34 pilot_heartbeat.json
[2026-01-09 16:34:34] -rw-------. 1 boinc boinc      4881 Jan  9 16:34 pilotlog.txt
[2026-01-09 16:34:34] -rw-------. 1 boinc boinc   1345230 Jan  9 16:34 log.47898826._026534.job.log.1
[2026-01-09 16:34:34] -rw-------. 1 boinc boinc       357 Jan  9 16:34 output.list
[2026-01-09 16:34:34] -rw-r--r--. 1 boinc boinc       620 Jan  9 16:34 runtime_log
[2026-01-09 16:34:34] -rw-------. 1 boinc boinc   1761280 Jan  9 16:34 result.tar.gz
[2026-01-09 16:34:34] -rw-r--r--. 1 boinc boinc      8833 Jan  9 16:34 runtime_log.err
[2026-01-09 16:34:34] -rw-------. 1 boinc boinc       655 Jan  9 16:34 RbLODmMl6x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmtYfKDmMqpLsn.diag
[2026-01-09 16:34:34] -rw-r--r--. 1 boinc boinc     20816 Jan  9 16:34 stderr.txt
[2026-01-09 16:34:34] HITS file was successfully produced:
[2026-01-09 16:34:34] -rw-------. 1 boinc boinc 216426254 Jan  9 16:33 shared/HITS.pool.root.1
[2026-01-09 16:34:34]  *** Contents of shared directory: ***
[2026-01-09 16:34:34] total 432852
[2026-01-09 16:34:34] -rw-r--r--. 2 boinc boinc 224440054 Jan  9 13:46 ATLAS.root_0
[2026-01-09 16:34:34] -rw-r--r--. 2 boinc boinc     15847 Jan  9 13:46 start_atlas.sh
[2026-01-09 16:34:34] -rw-r--r--. 2 boinc boinc    592404 Jan  9 13:46 input.tar.gz
[2026-01-09 16:34:34] -rw-------. 1 boinc boinc 216426254 Jan  9 16:33 HITS.pool.root.1
[2026-01-09 16:34:34] -rw-------. 1 boinc boinc   1761280 Jan  9 16:34 result.tar.gz
16:34:36 (6137): run_atlas exited; CPU time 74252.441130
16:34:36 (6137): called boinc_finish(0)

</stderr_txt>
]]>

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