Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
00:09:05 (3600924): wrapper (7.7.26015): starting
00:09:05 (3600924): wrapper: running run_atlas (--nthreads 3)
[2026-01-10 00:09:05] Arguments: --nthreads 3
[2026-01-10 00:09:05] Threads: 3
[2026-01-10 00:09:05] Checking for CVMFS
[2026-01-10 00:09:05] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 00:09:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 00:09:05] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 00:09:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 00:09:05] 2.9.2.0 2900183 2874 84684 154960 0 56 21184064 36864001 0 130560 0 1772947 99.987 107176 5835 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-10 00:09:05] CVMFS is ok
[2026-01-10 00:09:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 00:09:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 00:09:05] Further information can be found at the LHC@home message board.
[2026-01-10 00:09:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 00:09:05] Checking for apptainer binary...
[2026-01-10 00:09:05] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 00:09:05] Running /usr/bin/apptainer --version
[2026-01-10 00:09:05] apptainer version 1.4.1-1.1
[2026-01-10 00:09:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 00:09:05] thA312a
[2026-01-10 00:09:05] apptainer works
[2026-01-10 00:09:05] Set ATHENA_PROC_NUMBER=3
[2026-01-10 00:09:05] Set ATHENA_CORE_NUMBER=3
[2026-01-10 00:09:05] Starting ATLAS job with PandaID=6963157463
[2026-01-10 00:09:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 02:03:31]  *** The last 200 lines of the pilot log: ***
[2026-01-10 02:03:31] 2026-01-10 01:03:13,152 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 02:03:31] 2026-01-10 01:03:13,152 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 02:03:31] 2026-01-10 01:03:13,215 | INFO     | all data control threads have been joined
[2026-01-10 02:03:31] 2026-01-10 01:03:13,443 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 02:03:31] 2026-01-10 01:03:13,485 | INFO     | all payload control threads have been joined
[2026-01-10 02:03:31] 2026-01-10 01:03:13,605 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 02:03:31] 2026-01-10 01:03:13,605 | INFO     | aborting loop
[2026-01-10 02:03:31] 2026-01-10 01:03:14,119 | INFO     | all job control threads have been joined
[2026-01-10 02:03:31] 2026-01-10 01:03:14,157 | INFO     | [job] retrieve thread has finished
[2026-01-10 02:03:31] 2026-01-10 01:03:14,158 | INFO     | [job] queue monitor thread has finished
[2026-01-10 02:03:31] 2026-01-10 01:03:14,220 | INFO     | [data] control thread has finished
[2026-01-10 02:03:31] 2026-01-10 01:03:14,298 | INFO     | [payload] failed_post thread has finished
[2026-01-10 02:03:31] 2026-01-10 01:03:14,491 | INFO     | [payload] control thread has finished
[2026-01-10 02:03:31] 2026-01-10 01:03:14,611 | INFO     | [job] job monitor thread has finished
[2026-01-10 02:03:31] 2026-01-10 01:03:14,844 | INFO     | [payload] validate_post thread has finished
[2026-01-10 02:03:31] 2026-01-10 01:03:15,101 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 02:03:31] 2026-01-10 01:03:15,125 | INFO     | [job] control thread has finished
[2026-01-10 02:03:31] 2026-01-10 01:03:15,304 | INFO     | [data] copytool_in thread has finished
[2026-01-10 02:03:31] 2026-01-10 01:03:15,450 | INFO     | [data] copytool_out thread has finished
[2026-01-10 02:03:31] 2026-01-10 01:03:15,540 | INFO     | [job] validate thread has finished
[2026-01-10 02:03:31] 2026-01-10 01:03:15,560 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 02:03:31] 2026-01-10 01:03:15,640 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 02:03:31] 2026-01-10 01:03:15,640 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 02:03:31] 2026-01-10 01:03:18,801 | INFO     | [monitor] cgroup control has ended
[2026-01-10 02:03:31] 2026-01-10 01:03:19,108 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 02:03:31] 2026-01-10 01:03:23,823 | INFO     | job.realtimelogging is not enabled
[2026-01-10 02:03:31] 2026-01-10 01:03:24,828 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 02:03:31] 2026-01-10 01:03:26,355 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140612864972608)>', '<ExcThread(monitor, started 140612212856576)>']
[2026-01-10 02:03:31] 2026-01-10 01:03:27,228 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 02:03:31] 2026-01-10 01:03:27,228 | INFO     | [monitor] control thread has ended
[2026-01-10 02:03:31] 2026-01-10 01:03:31,361 | INFO     | all workflow threads have been joined
[2026-01-10 02:03:31] 2026-01-10 01:03:31,361 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 02:03:31] 2026-01-10 01:03:31,361 | INFO     | traces error code: 0
[2026-01-10 02:03:31] 2026-01-10 01:03:31,362 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 02:03:31] 2026-01-10 01:03:31,414 [wrapper] ==== pilot stdout END ====
[2026-01-10 02:03:31] 2026-01-10 01:03:31,416 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 02:03:31] 2026-01-10 01:03:31,419 [wrapper] pilotpid: 3604656
[2026-01-10 02:03:31] 2026-01-10 01:03:31,422 [wrapper] Pilot exit status: 0
[2026-01-10 02:03:31] 2026-01-10 01:03:31,429 [wrapper] pandaids: 6963157463
[2026-01-10 02:03:31] 2026-01-10 01:03:31,447 [wrapper] cleanup supervisor_pilot 3626372 3604657
[2026-01-10 02:03:31] 2026-01-10 01:03:31,450 [wrapper] Test setup, not cleaning
[2026-01-10 02:03:31] 2026-01-10 01:03:31,453 [wrapper] apfmon messages muted
[2026-01-10 02:03:31] 2026-01-10 01:03:31,455 [wrapper] ==== wrapper stdout END ====
[2026-01-10 02:03:31] 2026-01-10 01:03:31,458 [wrapper] ==== wrapper stderr END ====
[2026-01-10 02:03:31]  *** Error codes and diagnostics ***
[2026-01-10 02:03:31]     "exeErrorCode": 0,
[2026-01-10 02:03:31]     "exeErrorDiag": "",
[2026-01-10 02:03:31]     "pilotErrorCode": 0,
[2026-01-10 02:03:31]     "pilotErrorDiag": "",
[2026-01-10 02:03:31]  *** Listing of results directory ***
[2026-01-10 02:03:31] total 448860
[2026-01-10 02:03:31] -rwx------ 1 boinc boinc     36322 Jan  8 22:44 runpilot2-wrapper.sh
[2026-01-10 02:03:31] -rw-r--r-- 1 boinc boinc      5112 Jan  8 22:44 queuedata.json
[2026-01-10 02:03:31] -rw-r--r-- 1 boinc boinc    579449 Jan  8 22:44 pilot3.tar.gz
[2026-01-10 02:03:31] -rw-r--r-- 1 boinc boinc       100 Jan 10 00:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 02:03:31] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 00:09 run_atlas
[2026-01-10 02:03:31] -rw-r--r-- 1 boinc boinc       105 Jan 10 00:09 job.xml
[2026-01-10 02:03:31] -rw-r--r-- 2 boinc boinc 226916114 Jan 10 00:09 EVNT.47898824._001249.pool.root.1
[2026-01-10 02:03:31] -rw-r--r-- 2 boinc boinc    592384 Jan 10 00:09 input.tar.gz
[2026-01-10 02:03:31] -rw-r--r-- 2 boinc boinc     15847 Jan 10 00:09 start_atlas.sh
[2026-01-10 02:03:31] drwxrwx--x 2 boinc boinc      4096 Jan 10 00:09 shared
[2026-01-10 02:03:31] -rw-r--r-- 1 boinc boinc         0 Jan 10 00:09 boinc_setup_complete
[2026-01-10 02:03:31] -rw-r--r-- 1 boinc boinc      6447 Jan 10 00:09 init_data.xml
[2026-01-10 02:03:31] -rw-r--r-- 1 boinc boinc         0 Jan 10 00:09 boinc_lockfile
[2026-01-10 02:03:31] -rw-r--r-- 1 boinc boinc      2517 Jan 10 00:09 pandaJob.out
[2026-01-10 02:03:31] -rw------- 1 boinc boinc    989375 Jan 10 00:09 agis_schedconf.cvmfs.json
[2026-01-10 02:03:31] -rw------- 1 boinc boinc   1516240 Jan 10 00:09 agis_ddmendpoints.agis.ALL.json
[2026-01-10 02:03:31] drwx------ 5 boinc boinc      4096 Jan 10 00:09 pilot3
[2026-01-10 02:03:31] -rw------- 1 boinc boinc 226316450 Jan 10 02:02 HITS.47898826._032324.pool.root.1
[2026-01-10 02:03:31] -rw------- 1 boinc boinc        95 Jan 10 02:02 pilot_heartbeat.json
[2026-01-10 02:03:31] -rw-r--r-- 1 boinc boinc       529 Jan 10 02:02 boinc_task_state.xml
[2026-01-10 02:03:31] -rw------- 1 boinc boinc      1017 Jan 10 02:02 memory_monitor_summary.json
[2026-01-10 02:03:31] -rw------- 1 boinc boinc    264988 Jan 10 02:03 log.47898826._032324.job.log.tgz.1
[2026-01-10 02:03:31] -rw------- 1 boinc boinc      7744 Jan 10 02:03 heartbeat.json
[2026-01-10 02:03:31] -rw-r--r-- 1 boinc boinc      8192 Jan 10 02:03 boinc_mmap_file
[2026-01-10 02:03:31] -rw-r--r-- 1 boinc boinc        27 Jan 10 02:03 wrapper_checkpoint.txt
[2026-01-10 02:03:31] -rw------- 1 boinc boinc      4628 Jan 10 02:03 pilotlog.txt
[2026-01-10 02:03:31] -rw------- 1 boinc boinc    986256 Jan 10 02:03 log.47898826._032324.job.log.1
[2026-01-10 02:03:31] -rw------- 1 boinc boinc       357 Jan 10 02:03 output.list
[2026-01-10 02:03:31] -rw-r--r-- 1 boinc boinc       620 Jan 10 02:03 runtime_log
[2026-01-10 02:03:31] -rw------- 1 boinc boinc   1269760 Jan 10 02:03 result.tar.gz
[2026-01-10 02:03:31] -rw-r--r-- 1 boinc boinc      8902 Jan 10 02:03 runtime_log.err
[2026-01-10 02:03:31] -rw------- 1 boinc boinc       660 Jan 10 02:03 OGlKDmGzCy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmSOlKDmRo7h7m.diag
[2026-01-10 02:03:31] -rw-r--r-- 1 boinc boinc      6851 Jan 10 02:03 stderr.txt
[2026-01-10 02:03:31] HITS file was successfully produced:
[2026-01-10 02:03:31] -rw------- 1 boinc boinc 226316450 Jan 10 02:02 shared/HITS.pool.root.1
[2026-01-10 02:03:31]  *** Contents of shared directory: ***
[2026-01-10 02:03:31] total 444460
[2026-01-10 02:03:31] -rw-r--r-- 2 boinc boinc 226916114 Jan 10 00:09 ATLAS.root_0
[2026-01-10 02:03:31] -rw-r--r-- 2 boinc boinc    592384 Jan 10 00:09 input.tar.gz
[2026-01-10 02:03:31] -rw-r--r-- 2 boinc boinc     15847 Jan 10 00:09 start_atlas.sh
[2026-01-10 02:03:31] -rw------- 1 boinc boinc 226316450 Jan 10 02:02 HITS.pool.root.1
[2026-01-10 02:03:31] -rw------- 1 boinc boinc   1269760 Jan 10 02:03 result.tar.gz
02:03:32 (3600924): run_atlas exited; CPU time 19867.344701
02:03:32 (3600924): called boinc_finish(0)

</stderr_txt>
]]>

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